RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHROOM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000138771

Ensembl transcript IDs: ENST00000296043.7, ENST00000425645.2, ENST00000466541.1, ENST00000469923.5, ENST00000473602.1, ENST00000481002.5, ENST00000484236.1, ENST00000485780.1, ENST00000486758.5, ENST00000490690.1, ENST00000497440.5, ENST00000644244.1, ENST00000646790.1

Found 802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACATGCCCAGGAACTTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTaGTTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTG +
Preference number: 1 (lower is better)
Translates to: TCPGTSQVAQEVEAS*FSRRTLSFPGTLRV
Trigger: CACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAAGTTCCTGGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp GGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCTTTCCTaGAACCTTGCGGGTGGCTGGAGTATCTGCATTTGGAGTATTGCA +
Preference number: 1 (lower is better)
Translates to: GSGGLLIFSQDIVLS*NLAGGWSICIWSIA
Trigger: TGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 90 bp TTAAGGCTTTATGTTGCAGACCCTTCATTAATGGTACTTGTACCCTaGCATCAGGATACACTGCCCACCAGCAAGGAAGGCCACTGTGGA +
Preference number: 1 (lower is better)
Translates to: LRLYVADPSLMVLVP*HQDTLPTSKEGHCG
Trigger: TCCACAGTGGCCTTCCTTGCTGGTGGGCAGTGTATCCTGATGGCAGGGTACAAGTACCATTAATGAAGGGTCTGCAACATAAAGCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 90 bp CAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTATCTaGATTTGGAGTATTGCAAGATTATCTCACCTGAGTTCTGACCAG +
Preference number: 1 (lower is better)
Translates to: QDIVLSWNLAGGWSI*IWSIARLSHLSSDQ
Trigger: CTGGTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 90 bp AGGCCTCCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTaGGGGTGGCTGGAGTATCTGCATTTGGAGTATTGCAAGATTATC +
Preference number: 1 (lower is better)
Translates to: RPPDFLAGHCPFLEP*GWLEYLHLEYCKII
Trigger: GATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGGAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp TTCGACAGCATCTGGTCTCATAGAGAAACTCAGGCACTTTCACTGTaGATCCTCCCTTCATTCTTTGGGGTTAAGTGGCCACCGCAAGAA +
Preference number: 1 (lower is better)
Translates to: FDSIWSHRETQALSL*ILPSFFGVKWPPQE
Trigger: TTCTTGCGGTGGCCACTTAACCCCAAAGAATGAAGGGAGGATCCACAGTGAAAGTGCCTGAGTTTCTCTATGAGACCAGATGCTGTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 90 bp GGACACAATCCTAGGAGTGTCACAAGCTTTCAGATGTTTGTGGCATaGCAAGCAGCATTGCCTGTTACTGTGCTGTGGGAGTCAATTACT +
Preference number: 1 (lower is better)
Translates to: GHNPRSVTSFQMFVA*QAALPVTVLWESIT
Trigger: AGTAATTGACTCCCACAGCACAGTAACAGGCAATGCTGCTTGGCATGCCACAAACATCTGAAAGCTTGTGACACTCCTAGGATTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp CAAAGTATAAGGCTACTGCCATCTCCAGCAGCTGTAAACATAGCCTaGCTGCCAGCCCATAACCTCCTCAGCCTTCCAGTTTGTTTTTAT +
Preference number: 1 (lower is better)
Translates to: QSIRLLPSPAAVNIA*LPAHNLLSLPVCFY
Trigger: ATAAAAACAAACTGGAAGGCTGAGGAGGTTATGGGCTGGCAGCCAGGCTATGTTTACAGCTGCTGGAGATGGCAGTAGCCTTATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp ACTAAGAATAACTGTAGACGTTTGCTGGCTGTCTTCCACCTGGCTTaGCTTGTGAGGGCTCATTCAGTATCAGCAAGACACACAGGTAGT +
Preference number: 1 (lower is better)
Translates to: TKNNCRRLLAVFHLA*LVRAHSVSARHTGS
Trigger: ACTACCTGTGTGTCTTGCTGATACTGAATGAGCCCTCACAAGCCAAGCCAGGTGGAAGACAGCCAGCAAACGTCTACAGTTATTCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp AGAATGGACACAATCCTAGGAGTGTCACAAGCTTTCAGATGTTTGTaGCATGCCAAGCAGCATTGCCTGTTACTGTGCTGTGGGAGTCAA +
Preference number: 1 (lower is better)
Translates to: RMDTILGVSQAFRCL*HAKQHCLLLCCGSQ
Trigger: TTGACTCCCACAGCACAGTAACAGGCAATGCTGCTTGGCATGCCACAAACATCTGAAAGCTTGTGACACTCCTAGGATTGTGTCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTaGCTGGAGTATCTGCATTTGGAGTATTGCAAGATTATCTCACCT +
Preference number: 1 (lower is better)
Translates to: PDFLAGHCPFLEPCG*LEYLHLEYCKIISP
Trigger: AGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp GTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATCAAACGTaGAAAAACAAATCTACCTCTAGCACAGCCTGGGATGTACTACCT +
Preference number: 1 (lower is better)
Translates to: VSPNQQRWPPATDQT*KNKSTSSTAWDVLP
Trigger: AGGTAGTACATCCCAGGCTGTGCTAGAGGTAGATTTGTTTTTTCACGTTTGATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp CCGAAAAATGGTCATCTCGAAGAGTGTTGGGAACTGGGAGCCCCCTaGATTCCTCTGAGGAATTTCACTAAGAATAACTGTAGACGTTTG +
Preference number: 1 (lower is better)
Translates to: PKNGHLEECWELGAP*IPLRNFTKNNCRRL
Trigger: CAAACGTCTACAGTTATTCTTAGTGAAATTCCTCAGAGGAATCCAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATGACCATTTTTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp ATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTATCTGCATTTaGAGTATTGCAAGATTATCTCACCTGAGTTCTGACCAGAAGTGT +
Preference number: 1 (lower is better)
Translates to: IVLSWNLAGGWSICI*SIARLSHLSSDQKC
Trigger: ACACTTCTGGTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp ATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTaGAGTATCTGCATTTGGAGTATTGCAAGATTATCTCACCTGAGT +
Preference number: 1 (lower is better)
Translates to: IFSQDIVLSWNLAGG*SICIWSIARLSHLS
Trigger: ACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp TTTGGGGTTAAGTGGCCACCGCAAGAAACAAAACAGCATGAGAAATaGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTCA +
Preference number: 1 (lower is better)
Translates to: FGVKWPPQETKQHEK*LSQPTCSDMPRNFS
Trigger: TGAGAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTGTTTTGTTTCTTGCGGTGGCCACTTAACCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp ATAAACAGGCCGTATTTAGCCCAAATCTTGTTCAGGAGAACAGCATaGGCTCCGTTTGAATTTTGTTGGATTCTGGACGTCCTCCTCCTA +
Preference number: 1 (lower is better)
Translates to: INRPYLAQILFRRTA*APFEFCWILDVLLL
Trigger: TAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTGGGCTAAATACGGCCTGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp TGTTCCCATAGAGCAAAGGAAAAGATGTTTGGTTTCGACAGCATCTaGTCTCATAGAGAAACTCAGGCACTTTCACTGTGGATCCTCCCT +
Preference number: 1 (lower is better)
Translates to: CSHRAKEKMFGFDSI*SHRETQALSLWILP
Trigger: AGGGAGGATCCACAGTGAAAGTGCCTGAGTTTCTCTATGAGACCAGATGCTGTCGAAACCAAACATCTTTTCCTTTGCTCTATGGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp TGTTCAGGAGAACAGCATGGGCTCCGTTTGAATTTTGTTGGATTCTaGACGTCCTCCTCCTATTATATAGGTCTGAGAGTTGTCTTTGTT +
Preference number: 1 (lower is better)
Translates to: CSGEQHGLRLNFVGF*TSSSYYIGLRVVFV
Trigger: AACAAAGACAACTCTCAGACCTATATAATAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp CAAATCTTGTTCAGGAGAACAGCATGGGCTCCGTTTGAATTTTGTTaGATTCTGGACGTCCTCCTCCTATTATATAGGTCTGAGAGTTGT +
Preference number: 1 (lower is better)
Translates to: QILFRRTAWAPFEFC*ILDVLLLLYRSESC
Trigger: ACAACTCTCAGACCTATATAATAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp ATTATTGACTGTGAGCAAACATTCTCAGTGACATCACGCGTATTCTaGAACCCTGACCAACAACATGCTCCTTACTGTTCTCATGGTCTT +
Preference number: 1 (lower is better)
Translates to: IIDCEQTFSVTSRVF*NPDQQHAPYCSHGL
Trigger: AAGACCATGAGAACAGTAAGGAGCATGTTGTTGGTCAGGGTTTCAGAATACGCGTGATGTCACTGAGAATGTTTGCTCACAGTCAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp TCACATCCACAAAGACAATTATTGACTGTGAGCAAACATTCTCAGTaGCATCACGCGTATTCTGAAACCCTGACCAACAACATGCTCCTT +
Preference number: 1 (lower is better)
Translates to: SHPQRQLLTVSKHSQ*HHAYSETLTNNMLL
Trigger: AAGGAGCATGTTGTTGGTCAGGGTTTCAGAATACGCGTGATGTCACTGAGAATGTTTGCTCACAGTCAATAATTGTCTTTGTGGATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp GTGGCTGGAGTATCTGCATTTGGAGTATTGCAAGATTATCTCACCTaGGTTCTGACCAGAAGTGTATCTCCAAAATTATCACATCCACAA +
Preference number: 1 (lower is better)
Translates to: VAGVSAFGVLQDYLT*VLTRSVSPKLSHPQ
Trigger: TTGTGGATGTGATAATTTTGGAGATACACTTCTGGTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp GGGACACACACTGATCCATGTTGCCTCAGCCTGTTAAAAACTAAATaGTCAAACACCCTCCAATCAGTTCTCAGTTTCATTAACTTTCTT +
Preference number: 1 (lower is better)
Translates to: GTHTDPCCLSLLKTK*SNTLQSVLSFINFL
Trigger: AAGAAAGTTAATGAAACTGAGAACTGATTGGAGGGTGTTTGATCATTTAGTTTTTAACAGGCTGAGGCAACATGGATCAGTGTGTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp GGCTCTCAAATGTTAAAATACATCAGAATAACATGGGAAACCTGCTaGAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGT +
Preference number: 1 (lower is better)
Translates to: GSQMLKYIRITWETC*NAVSSRLGFVIAIG
Trigger: ACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTTTCCCATGTTATTCTGATGTATTTTAACATTTGAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 90 bp AACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTaGCCAGTTGTTTATAAGTTAATCAAAAGACATCTCTACTGGAGA +
Preference number: 1 (lower is better)
Translates to: NKAIALVDYAKETSG*PVVYKLIKRHLYWR
Trigger: TCTCCAGTAGAGATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 90 bp GAGTATCTGCATTTGGAGTATTGCAAGATTATCTCACCTGAGTTCTaGCCAGAAGTGTATCTCCAAAATTATCACATCCACAAAGACAAT +
Preference number: 1 (lower is better)
Translates to: EYLHLEYCKIISPEF*PEVYLQNYHIHKDN
Trigger: ATTGTCTTTGTGGATGTGATAATTTTGGAGATACACTTCTGGTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCGTCTTCCACCTGGCTTaGCTTGTGAGGGCTCATTCA +
Preference number: 2 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVVFHLA*LVRAHS
Trigger: TGAATGAGCCCTCACAAGCCAAGCCAGGTGGAAGAC...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGCCATCAGGATACACTaGCCACCAGCAAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEAIRIH*PPARKA
Trigger: GGCCTTCCTTGCTGGTGGGCAGTGTATCCTGATGGC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCCCCCTGGATTCCTCTaGGGAATTTCACTAAGAATA +
Preference number: 2 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVPPGFL*GISLRI
Trigger: TATTCTTAGTGAAATTCCTCAGAGGAATCCAGGGGG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCATCTCACCTGAGTTCTaGCCAGAAGTGTATCTCCAA +
Preference number: 2 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVISPEF*PEVYLQ
Trigger: TTGGAGATACACTTCTGGTCAGAACTCAGGTGAGAT...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCGCTGTAAACATAGCCTaGCTGCCAGCCCATAACCTC +
Preference number: 2 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFAVNIA*LPAHNL
Trigger: GAGGTTATGGGCTGGCAGCCAGGCTATGTTTACAGC...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCATCTCGAAGAGTGTTaGGAACTGGGAGCCCCCTGG +
Preference number: 2 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPHLEEC*ELGAPW
Trigger: CCAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCGAGGGGGACACACACTaGTCCATGTTGCCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFEGDTH*SMLPQP
Trigger: AGGCTGAGGCAACATGGATCAGTGTGTGTCCCCCTC...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCCTGTTACTGTGCTGTaGGAGTCAATTACTTTTATG +
Preference number: 2 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEPVTVL*ESITFM
Trigger: CATAAAAGTAATTGACTCCCACAGCACAGTAACAGG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 90 bp GAAAGAATGGACACAATCCTAGGAGTGTCACAAGCTTTCAGATGTTaGTGGCATGCCAAGCAGCATTGCCTGTTACTGTGCTGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: ERMDTILGVSQAFRC*WHAKQHCLLLCCGS
Trigger: ACTCCCACAGCACAGTAACAGGCAATGCTGCTTGGCATGCCACAAACATCTGAAAGCTTGTGACACTCCTAGGATTGTGTCCATTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTATAAATTAGAAAAGTaGCTGGGTGAAGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEYKLEK*LGEVAH
Trigger: ATGAGCCACTTCACCCAGCCACTTTTCTAATTTATA...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCAAGTGGCCCAGGAAGTaGAGGCCTCCTGATTTTCTC +
Preference number: 2 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPKWPRK*RPPDFL
Trigger: GAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATAATAACCGCAGTGCATaGGGCCTTCCTCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYNNRSA*GLPPGE
Trigger: TTCCCCAGGAGGAAGGCCTCATGCACTGCGGTTATT...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCACCTGGCTTGGCTTGTaGGGGCTCATTCAGTATCAG +
Preference number: 2 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFTWLGL*GLIQYQ
Trigger: CTGATACTGAATGAGCCCTCACAAGCCAAGCCAGGT...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCCATACTCAGTCCAGTaGAAGCGCAGAATGCCTGCT +
Preference number: 2 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFPYSVQ*KRRMPA
Trigger: AGCAGGCATTCTGCGCTTCCACTGGACTGAGTATGG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCACTGTAGACGTTTGCTaGCTGTCTTCCACCTGGCTT +
Preference number: 2 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPTVDVC*LSSTWL
Trigger: AAGCCAGGTGGAAGACAGCCAGCAAACGTCTACAGT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTCTGTTCTCATGGTCTTaGCAAAGGATACTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPLFSWS*QRILLG
Trigger: TCCCAACAGTATCCTTTGCCAAGACCATGAGAACAG...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGAACTGGGAGCCCCCTaGATTCCTCTGAGGAATTTC +
Preference number: 2 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFELGAP*IPLRNF
Trigger: GAAATTCCTCAGAGGAATCCAGGGGGCTCCCAGTTC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGCTTTCAGATGTTTGTaGCATGCCAAGCAGCATTGC +
Preference number: 2 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPAFRCL*HAKQHC
Trigger: GCAATGCTGCTTGGCATGCCACAAACATCTGAAAGC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 90 bp ATAGAGAAACTCAGGCACTTTCACTGTGGATCCTCCCTTCATTCTTaGGGGTTAAGTGGCCACCGCAAGAAACAAAACAGCATGAGAAAT +
Preference number: 2 (lower is better)
Translates to: IEKLRHFHCGSSLHS*GLSGHRKKQNSMRN
Trigger: ATTTCTCATGCTGTTTTGTTTCTTGCGGTGGCCACTTAACCCCAAAGAATGAAGGGAGGATCCACAGTGAAAGTGCCTGAGTTTCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAGCATGGGCTCCGTTTaGATTTTGTTGGATTCTGGA +
Preference number: 2 (lower is better)
Translates to: AIALVDYAKETSGWPVVYSMGSV*ILLDSG
Trigger: TCCAGAATCCAACAAAATTCAAACGGAGCCCATGCT...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTGCCACAGATCAAACGTaGAAAAACAAATCTACCTCT +
Preference number: 2 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPATDQT*KNKSTS
Trigger: AGAGGTAGATTTGTTTTTTCACGTTTGATCTGTGGC...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATTGTCACTGGTTCTACTaGTTTCCTGGGAGACAGGAC +
Preference number: 2 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYCHWFY*FPGRQD
Trigger: GTCCTGTCTCCCAGGAAAGCAGTAGAACCAGTGACA...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATAACCTTGCGGGTGGCTaGAGTATCTGCATTTGGAGT +
Preference number: 2 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYNLAGG*SICIWS
Trigger: ACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTT...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACAGGAACTTCTCAAGTaGCCCAGGAAGTGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGQELLK*PRKWRP
Trigger: AGGCCTCCACTTCCTGGGCCACTTGAGAAGTTCCTG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAGTGGAAGCGCAGAATaGCTGCTCGTGTTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFSGSAE*LLVLVK
Trigger: TTTTACCAACACGAGCAGGCATTCTGCGCTTCCACT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTATAACTGTAGACGTTTaGTGGCTGTCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFITVDV*WLSSTW
Trigger: CCAGGTGGAAGACAGCCAGCAAACGTCTACAGTTAT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGACCAAATCAACAAAGGTaGCCACCAGCCACAGATCAA +
Preference number: 2 (lower is better)
Translates to: LNENIPGKPRCCLICINGPNQQR*PPATDQ
Trigger: TTGATCTGTGGCTGGTGGCCACCTTTGTTGATTTGG...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCAAGGAAACTTCTGGGTaGCCAGTTGTTTATAAGTTA +
Preference number: 2 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFKETSG*PVVYKL
Trigger: TAACTTATAAACAACTGGCCACCCAGAAGTTTCCTT...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAATGGTACTTGTACCCTaGCATCAGGATACACTGCCC +
Preference number: 2 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGMVLVP*HQDTLP
Trigger: GGGCAGTGTATCCTGATGGCAGGGTACAAGTACCAT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGACACACTGATCCATGTTaGCTCAGCCTGTTAAAAACT +
Preference number: 2 (lower is better)
Translates to: LNENIPGKPRCCLICINGHTDPC*LSLLKT
Trigger: AGTTTTTAACAGGCTGAGGCAACATGGATCAGTGTG...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR GCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAGTGTGGCTGTTGAATaGTGTCACTGGTTCTACTGC +
Preference number: 2 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGSVAVE*CHWFYC
Trigger: GCAGTAGAACCAGTGACAGCATTCAACAGCCACACT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCAATTTTGTTGGATTCTaGACGTCCTCCTCCTATTAT +
Preference number: 2 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPNFVGF*TSSSYY
Trigger: ATAATAGGAGGAGGACGTCCAGAATCCAACAAAATT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTTTCAGGAGAACAGCATaGGCTCCGTTTGAATTTTGT +
Preference number: 2 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFFRRTA*APFEFC
Trigger: ACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAA...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTCAAATCCCGAAAAATaGTCATCTCGAAGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFSNPEK*SSRRVL
Trigger: CAACACTCTTCGAGATGACCATTTTTCGGGATTTGA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 90 bp ATCATTAAAACAGCCTCAATAAACAGGCCGTATTTAGCCCAAATCTaGTTCAGGAGAACAGCATGGGCTCCGTTTGAATTTTGTTGGATT +
Preference number: 2 (lower is better)
Translates to: IIKTASINRPYLAQI*FRRTAWAPFEFCWI
Trigger: AATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTGGGCTAAATACGGCCTGTTTATTGAGGCTGTTTTAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATCTTCACGCTCAACGTaGCTATCTTTGGAATTCATT +
Preference number: 2 (lower is better)
Translates to: LNENIPGKPRCCLICINGSSRST*LSLEFI
Trigger: AATGAATTCCAAAGATAGTCACGTTGAGCGTGAAGA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 90 bp ACAACATGCTCCTTACTGTTCTCATGGTCTTGGCAAAGGATACTGTaGGGAGAAAGAAGAATGGTTTCTACTGTAAATGAGTTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: TTCSLLFSWSWQRIL*GERRMVSTVNEFLK
Trigger: TTTTAAAAACTCATTTACAGTAGAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTAAGGAGCATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp GGAACTTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTaGTTTTCTCGCAGGACATTGTCCTTTCCTGGAACC +
Preference number: 3 (lower is better)
Translates to: GTSQVAQEVEAS*FSRRTLSFPGT
Trigger: GGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp CACTGGTTCTACTGCTTTCCTGGGAGACAGGACCTCTaGATGAAAACATCCCTGGGAAACCAAGGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: HWFYCFPGRQDL*MKTSLGNQGAV
Trigger: GACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAGAGGTCCTGTCTCCCAGGAAAGCAGTAGAACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 72 bp TATGTTGCAGACCCTTCATTAATGGTACTTGTACCCTaGCATCAGGATACACTGCCCACCAGCAAGGAAGGC +
Preference number: 3 (lower is better)
Translates to: YVADPSLMVLVP*HQDTLPTSKEG
Trigger: GCCTTCCTTGCTGGTGGGCAGTGTATCCTGATGGCAGGGTACAAGTACCATTAATGAAGGGTCTGCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 72 bp GGACTCCCCCATACTCAGTCCAGTGGAAGCGCAGAATaGCTGCTCGTGTTGGTAAAAATAAGACAGGAATGT +
Preference number: 3 (lower is better)
Translates to: GLPHTQSSGSAE*LLVLVKIRQEC
Trigger: ACATTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTGAGTATGGGGGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 72 bp GATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTaGGGGTGGCTGGAGTATCTGCATTTGGAGTATTGC +
Preference number: 3 (lower is better)
Translates to: DFLAGHCPFLEP*GWLEYLHLEYC
Trigger: GCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGCATGCCAAGCAGCATaGCCTGTTACTGTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPACQAA*PVTVLW
Trigger: CCACAGCACAGTAACAGGCAATGCTGCTTGGCATGC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp GGTTCTACTGCTTTCCTGGGAGACAGGACCTCTGAATaGAAACATCCCTGGGAAACCAAGGTGCTGTCTTAT +
Preference number: 3 (lower is better)
Translates to: GSTAFLGDRTSE*KHPWETKVLSY
Trigger: ATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAGAGGTCCTGTCTCCCAGGAAAGCAGTAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp GGCCACCGCAAGAAACAAAACAGCATGAGAAATGGCTaGGTCAACCAACATGTAGTGACATGCCCAGGAACT +
Preference number: 3 (lower is better)
Translates to: GHRKKQNSMRNG*VNQHVVTCPGT
Trigger: AGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTGTTTTGTTTCTTGCGGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 72 bp GTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTATCTaGATTTGGAGTATTGCAAGATTATCTCACCTGAGT +
Preference number: 3 (lower is better)
Translates to: VLSWNLAGGWSI*IWSIARLSHLS
Trigger: ACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp GGTCATCTCGAAGAGTGTTGGGAACTGGGAGCCCCCTaGATTCCTCTGAGGAATTTCACTAAGAATAACTGT +
Preference number: 3 (lower is better)
Translates to: GHLEECWELGAP*IPLRNFTKNNC
Trigger: ACAGTTATTCTTAGTGAAATTCCTCAGAGGAATCCAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp TCCTGGAACCTTGCGGGTGGCTGGAGTATCTGCATTTaGAGTATTGCAAGATTATCTCACCTGAGTTCTGAC +
Preference number: 3 (lower is better)
Translates to: SWNLAGGWSICI*SIARLSHLSSD
Trigger: GTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCTGGAGTATCTGCATTaGGAGTATTGCAAGATTATC +
Preference number: 3 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVLEYLH*EYCKII
Trigger: GATAATCTTGCAATACTCCAAATGCAGATACTCCAG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATTCCTTTCCTGGAACCTaGCGGGTGGCTGGAGTATCT +
Preference number: 3 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYSFPGT*RVAGVS
Trigger: AGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGA...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp CAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTaGAGTATCTGCATTTGGAGTATTGCAAGATTATCT +
Preference number: 3 (lower is better)
Translates to: QDIVLSWNLAGG*SICIWSIARLS
Trigger: AGATAATCTTGCAATACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp TCACTGTGGATCCTCCCTTCATTCTTTGGGGTTAAGTaGCCACCGCAAGAAACAAAACAGCATGAGAAATGG +
Preference number: 3 (lower is better)
Translates to: SLWILPSFFGVK*PPQETKQHEKW
Trigger: CCATTTCTCATGCTGTTTTGTTTCTTGCGGTGGCCACTTAACCCCAAAGAATGAAGGGAGGATCCACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGAATGCCTGCTCGTGTaGGTAAAAATAAGACAGGAA +
Preference number: 3 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDECLLV*VKIRQE
Trigger: TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTTATTTAGCCCAAATCTaGTTCAGGAGAACAGCATGG +
Preference number: 3 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPYLAQI*FRRTAW
Trigger: CCATGCTGTTCTCCTGAACAAGATTTGGGCTAAATA...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCAATAACTGTAGACGTTaGCTGGCTGTCTTCCACCTG +
Preference number: 3 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPNNCRR*LAVFHL
Trigger: CAGGTGGAAGACAGCCAGCAAACGTCTACAGTTATT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp CCAAATCTTGTTCAGGAGAACAGCATGGGCTCCGTTTaGATTTTGTTGGATTCTGGACGTCCTCCTCCTATT +
Preference number: 3 (lower is better)
Translates to: PNLVQENSMGSV*ILLDSGRPPPI
Trigger: AATAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp GTTAAGCCCACACTCCTCACCTTAAAAGACAGCCACTaGTTCTTAGGGGTGGACCCAAACTTGTTAATCTTC +
Preference number: 3 (lower is better)
Translates to: VKPTLLTLKDSH*FLGVDPNLLIF
Trigger: GAAGATTAACAAGTTTGGGTCCACCCCTAAGAATCAGTGGCTGTCTTTTAAGGTGAGGAGTGTGGGCTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp CCGTATTTAGCCCAAATCTTGTTCAGGAGAACAGCATaGGCTCCGTTTGAATTTTGTTGGATTCTGGACGTC +
Preference number: 3 (lower is better)
Translates to: PYLAQILFRRTA*APFEFCWILDV
Trigger: GACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTGGGCTAAATACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp TGTGAGCAAACATTCTCAGTGACATCACGCGTATTCTaGAACCCTGACCAACAACATGCTCCTTACTGTTCT +
Preference number: 3 (lower is better)
Translates to: CEQTFSVTSRVF*NPDQQHAPYCS
Trigger: AGAACAGTAAGGAGCATGTTGTTGGTCAGGGTTTCAGAATACGCGTGATGTCACTGAGAATGTTTGCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 72 bp CAAGCTTTCAGATGTTTGTGGCATGCCAAGCAGCATTaGCTGTTACTGTGCTGTGGGAGTCAATTACTTTTA +
Preference number: 3 (lower is better)
Translates to: QAFRCLWHAKQH*LLLCCGSQLLL
Trigger: TAAAAGTAATTGACTCCCACAGCACAGTAACAGGCAATGCTGCTTGGCATGCCACAAACATCTGAAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp GAACAGCATGGGCTCCGTTTGAATTTTGTTGGATTCTaGACGTCCTCCTCCTATTATATAGGTCTGAGAGTT +
Preference number: 3 (lower is better)
Translates to: EQHGLRLNFVGF*TSSSYYIGLRV
Trigger: AACTCTCAGACCTATATAATAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCAGCATGGGCTCCGTTaGAATTTTGTTGGATTCTGG +
Preference number: 3 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFQHGLR*NFVGFW
Trigger: CCAGAATCCAACAAAATTCAAACGGAGCCCATGCTG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACATGCAGTGTGGCTGTaGAATGCTGTCACTGGTTCT +
Preference number: 3 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGHAVWL*NAVTGS
Trigger: AGAACCAGTGACAGCATTCAACAGCCACACTGCATG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp TATATAAGCTCCAAAGAACAAAGCCATAGCTTTGGTTaGCTATGCAAAGGAAACTTCTGGGTGGCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: YISSKEQSHSFG*LCKGNFWVASC
Trigger: ACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGCTTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp CCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATaGAGTCATGCAGTATATAAGCTCCAAAGAACAAAG +
Preference number: 3 (lower is better)
Translates to: PWETKVLSYLYQ*SHAVYKLQRTK
Trigger: CTTTGTTCTTTGGAGCTTATATACTGCATGACTCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR-3UTR CAA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAATTTCAAAGTCTCACTaGGTGCCTTACCCATTTCAC +
Preference number: 3 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGISKSH*VPYPFH
Trigger: GTGAAATGGGTAAGGCACCAAGTGAGACTTTGAAAT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp ACTGATCCATGTTGCCTCAGCCTGTTAAAAACTAAATaGTCAAACACCCTCCAATCAGTTCTCAGTTTCATT +
Preference number: 3 (lower is better)
Translates to: TDPCCLSLLKTK*SNTLQSVLSFI
Trigger: AATGAAACTGAGAACTGATTGGAGGGTGTTTGATCATTTAGTTTTTAACAGGCTGAGGCAACATGGATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp GTATCTGCATTTGGAGTATTGCAAGATTATCTCACCTaGGTTCTGACCAGAAGTGTATCTCCAAAATTATCA +
Preference number: 3 (lower is better)
Translates to: VSAFGVLQDYLT*VLTRSVSPKLS
Trigger: TGATAATTTTGGAGATACACTTCTGGTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGCAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR GCA 72 bp AAAATACATCAGAATAACATGGGAAACCTGCTGAAATaGAGTTTCCAGCAGACTTGGTTTTGTCATAGCAAT +
Preference number: 3 (lower is better)
Translates to: KIHQNNMGNLLK*SFQQTWFCHSN
Trigger: ATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTTTCCCATGTTATTCTGATGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CCA 72 bp AATAACTCCAACCTAACAATGAAGCCAGCACTACCATaGACAATTAAACTGAAGAGAAGTAAATTTGGAACC +
Preference number: 3 (lower is better)
Translates to: NNSNLTMKPALP*TIKLKRSKFGT
Trigger: GGTTCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGTTAGGTTGGAGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR TCA 72 bp ATGTTAAAATACATCAGAATAACATGGGAAACCTGCTaGAATGCAGTTTCCAGCAGACTTGGTTTTGTCATA +
Preference number: 3 (lower is better)
Translates to: MLKYIRITWETC*NAVSSRLGFVI
Trigger: TATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTTTCCCATGTTATTCTGATGTATTTTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGCAGTGAGCTCAAGCTaGAGGCCGAGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEAVSSS*RPRRGR
Trigger: CCGGCCTCGCCTCGGCCTCCAGCTTGAGCTCACTGC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGCAGGGGGCACGGGCCTaGCCAGGTCGCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLQGARA*PGRPQQ
Trigger: CTGCTGAGGGCGACCTGGCCAGGCCCGTGCCCCCTG...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGCCCTCACAGCCTCTTaGACCGGGAGGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEALTAS*TGRLGQ
Trigger: CTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGCTGGGCTCCCGCAGTaGGCTCAAGCTGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSAGLPQ*AQAGGR
Trigger: TCGGCCTCCAGCTTGAGCTCACTGCGGGAGCCCAGC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGCCTCCCTGCGGGGCTaGAGGCTGGGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDASLRG*RLGSRS
Trigger: ACTGCGGGAGCCCAGCCTGCAGCCCCGCAGGGAGGC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCTGCTGGCTCCAGGATaGGGGTGGCACTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVLLAPG*GWHSLA
Trigger: GGCAAGGGAGTGCCACCCCCATCCTGGAGCCAGCAG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCCCACACTCGGTCTCTaGCTCCCTTGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEPTLGL*LPCSRC
Trigger: GCAGCGAGAGCAAGGGAGCCAGAGACCGAGTGTGGG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCTCGGGCTCCCTCTCTaGCTCGCTGGAGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLELGLPL*LAGELE
Trigger: TTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGGGTCCTCGGCCGACATaGACTTCCCGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLGPRPT*TSRPWP
Trigger: GGGCCAGGGCCGGGAAGTCCATGTCGGCCGAGGACC...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCACCTCATACTCTGCTaGGACTCCCCTCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEHLILC*DSPPGV
Trigger: GACACCCGGAGGGGAGTCTCAGCAGAGTATGAGGTG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCTGCCTTGGTGTTGACTaGACAGGTGGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVCLGVD*TGGPAP
Trigger: GGGGGCAGGCCCACCTGTGCAGTCAACACCAAGGCA...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGCCCAGACTGGATGTGTaGGGGTGCGAGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLPRLDV*GCEGAG
Trigger: GCCTGCCCCCTCGCACCCGCACACATCCAGTCTGGG...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTGGAGAGCTGGAAGGTaGTCTGGCTACGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEWRAGR*SGYGGA
Trigger: GGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCA...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGGCGCTTGTCTGCGGTaGCGGGAGATGACCTGGACC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSGACLR*REMTWT
Trigger: GGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGTTGTGTGCCACGAGTaGGGTCGGCCTGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSVVCHE*GRPAGS
Trigger: TGAGCCTGCAGGCCGACCTCACTCGTGGCACACAAC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCGGGCCCCGACAGGCTaGGCGTGGAGCAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYRAPTG*AWSRPC
Trigger: GCAAGGCCTGCTCCACGCTCAGCCTGTCGGGGCCCG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTCTGCACAGGTGGGCCTaGCCCCGGGGTAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPLHRWA*PRGNPP
Trigger: AGGAGGGTTACCCCGGGGGCAGGCCCACCTGTGCAG...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATGCAGGGGTCACGCTGTaGCGCTCCCGGGGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYAGVTL*RSRGVC
Trigger: GCACACGCCCCGGGAGCGGCACAGCGTGACCCCTGC...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGGAGCGTGGCCTCCCTaGGGGGCTGCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGGAWPP*GAAGWA
Trigger: AGCCCAGCCTGCAGCCCCGCAGGGAGGCCACGCTCC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGCTCCAGGATGGGGGTaGCACTCCCTTGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEAPGWG*HSLAPR
Trigger: CCTCGGGGCAAGGGAGTGCCACCCCCATCCTGGAGC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGCATTGTGGTCTTCCTaGAAATCGCCCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEALWSS*KSPSQG
Trigger: GCCCTGGGAGGGCGATTTCCAGGAAGACCACAATGC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAACCCTCCGGCCCAGACTaGATGTGTGCGGGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEPSGPD*MCAGAR
Trigger: CCTCGCACCCGCACACATCCAGTCTGGGCCGGAGGG...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCCCTCTCTGGCTCGCTaGAGAGCTGGAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVPSLAR*RAGRCS
Trigger: AGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCGACGTCGAAAGGAGGTaGCCCCCAAGACACGGGACT +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVDVERR*PPRHGT
Trigger: AGTCCCGTGTCTTGGGGGCCACCTCCTTTCGACGTC...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGGCCGAGGAAGGCCGTaGCCGCCAGGACCTCGACGC +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGGRGRP*PPGPRR
Trigger: GCGTCGAGGTCCTGGCGGCCACGGCCTTCCTCGGCC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCCAGAGGGGTGCCAATTaGGGTCAGGGGTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSQRGAN*GQGCSP
Trigger: AGGGCTGCACCCCTGACCCCAATTGGCACCCCTCTG...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCGTTCAAATGTGGGGCTaGACGTGGCCTTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVVQMWG*TWPWGA
Trigger: CGCACCCCAAGGCCACGTCCAGCCCCACATTTGAAC...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGAATGGGCTCACTCGTaGGGTTTGGGGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSEWAHS*GLGAEP
Trigger: TGGCTCTGCCCCCAAACCTCACGAGTGAGCCCATTC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGAATAACCGCAGTGCATaGGGCCTTCCTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLENNRSA*GLPPGE
Trigger: TTCCCCAGGAGGAAGGCCTCATGCACTGCGGTTATT...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGGCCTAGCTCCAGGCTaGTGTGTCTTCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEGLAPG*CVFSDS
Trigger: AGAGTCTGAGAAGACACAGCAGCCTGGAGCTAGGCC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCCTCCCAGGGTCTTCTaGCTTGGTGTTGACTGCACA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEPPRVF*LGVDCT
Trigger: TGTGCAGTCAACACCAAGGCAGAAGACCCTGGGAGG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTGCGGGCCCAGGGGTaGCGGTTCGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLRAQG*RFGLLH
Trigger: GTGGAGGAGGCCGAACCGGCACCCCTGGGCCCGCAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAACGCATCCCATTTCTCTaGGGGCCCAGGGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQERIPFL*GPRGAG
Trigger: ACCGGCACCCCTGGGCCCGCAGAGAAATGGGATGCG...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAGCCTGCTGGGTTTCTaGAACTGTGGCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSLLGF*NCGRQE
Trigger: CTCCTGCCGGCCACAGTTGCAGAAACCCAGCAGGCT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTCGGCGAAGGAGCTGCTaGGATCTCGGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPRRRSC*DLGEPA
Trigger: AGCAGGCTCCCCGAGATCGCAGCAGCTCCTTCGCCG...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCCTTGTTCCACCGTTTaGTCCGCTAAGCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVPCSTV*SAKQVP
Trigger: GGGGACCTGCTTAGCGGAGCAAACGGTGGAACAAGG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGCTGCTTTCCTGTGCTaGGGGCCAGAGGTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSAAFLC*GPEVRC
Trigger: ACACCTCACCTCTGGCCCCCAGCACAGGAAAGCAGC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTGTGGGCTGTTGCCTTaGGGAGGTGTGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLECGLLP*GGVRCL
Trigger: GAGACATCTCACACCTCCCCAAGGCAACAGCCCACA...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTACCTGCCGGTCCAGATaGCTCCCGAGGTCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPTCRSR*LPRSGA
Trigger: CGCTCCTGACCTCGGGAGCCATCTGGACCGGCAGGT...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATGCCCTGACCATTTGCTaGGGCTCGGGCCTCCCTACC +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENALTIC*GSGLPT
Trigger: GGTAGGGAGGCCCGAGCCTCAGCAAATGGTCAGGGC...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAACACCCCAACGAGGGGTaGGATGGTGGAAGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEHPNEG*DGGRAA
Trigger: TGCCGCTCTTCCACCATCTCACCCCTCGTTGGGGTG...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTCAGCCCTGGTGTCTGTaGCCAGCCCTTGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPQPWCL*PALAFL
Trigger: CAGGAACGCAAGGGCTGGTCACAGACACCAGGGCTG...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCCCAGCAAGTTGGGCGTaGACGCTCATGAAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSPASWA*TLMKEG
Trigger: ACCCTCCTTCATGAGCGTTCACGCCCAACTTGCTGG...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTCATGGCTGAGGCTTTaGGTCTGGATGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSWLRL*VWMGAG
Trigger: GCCAGCACCCATCCAGACTCAAAGCCTCAGCCATGA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGGGAGAGCAGCAGGTTaGCCACCTTGTCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSGRAAG*PPCPNP
Trigger: GGGATTTGGACAAGGTGGTCAACCTGCTGCTCTCCC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGATGATCAGCCACTGCTaGGGCCGCCACAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLMISHC*GRHSHL
Trigger: CAAGTGGCTGTGGCGGCCGCAGCAGTGGCTGATCAT...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGCTGTCCTCTCTGGCTaGGTGGGCCCACTTTGCTCG +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEAVLSG*VGPLCS
Trigger: CGAGCAAAGTGGGCCCACGCAGCCAGAGAGGACAGC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACA +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVAPVSA*PGSVHT
Trigger: TGTGTGCACAGACCCAGGCCATGCAGATACTGGTGC...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCATGCTTGGGCTTCACTaGGGGGCTGTTCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVMLGLH*GAVLWT
Trigger: AGTCCAGAGAACAGCCCCCCAGTGAAGCCCAAGCAT...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGTCGGCAGCAGAGGTTaGCCAGGTTGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDVGSRG*PGWAFW
Trigger: CCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGAC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTGGCTCGCTGGAGAGCTaGAAGGTGCTCTGGCTACGG +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPGSLES*KVLWLR
Trigger: CCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCC...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGTCTCGGGGAGCCTGCTaGGTTTCTGCAACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLSRGAC*VSATVA
Trigger: GGCCACAGTTGCAGAAACCCAGCAGGCTCCCCGAGA...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGTTGAAGCTGGGGCGTaGCCCCTCGGGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEVEAGA*PLGILT
Trigger: AGTGAGGATCCCGAGGGGCCACGCCCCAGCTTCAAC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGATTGTCCATGGAGCCTaGACGCTCCCGGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLIVHGA*TLPARD
Trigger: ATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAAT...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTCCGCTCAGCTGCTaGCCGCAGGGCTGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFPPLSC*PQGCRE
Trigger: TTCCCGGCAGCCCTGCGGTCAGCAGCTGAGCGGAGG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGGGCGTGAACGCTCATaGAGGAGGGTGGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDGRERS*RRVVWT
Trigger: AGTCCACACCACCCTCCTTCATGAGCGTTCACGCCC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGCGGGCATCCTCATGCTaGCCAGCCAGGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLRASSC*PARIFL
Trigger: AAGGAAGATCCTGGCTGGTCAGCATGAGGATGCCCG...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGGTAGAGCATACCGTTaGTACTCACAGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEGRAYR*YSQKAE
Trigger: CTCAGCCTTCTGTGAGTAGCAACGGTATGCTCTACC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCACCGGCGAAGGAGCTaGTGCGATCTCGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPHRRRS*CDLGEP
Trigger: AGGCTCCCCGAGATCGCAGCAGCTCCTTCGCCGGTG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATAGATCCTCCCTGGAGTaGTCGGGGCCCCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENRSSLE*SGPQEV
Trigger: CACCTCTTGGGGCCCCGAGCACTCCAGGGAGGATCT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTGGATGGGTGCTGGCTaGCCACCAAGAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFWMGAG*PPRDPA
Trigger: TGCTGGGTCTCTTGGTGGGCAGCCAGCACCCATCCA...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCTCATCCAGCTTCCGTTaGTCAATGAGGAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVSSSFR*SMRSVD
Trigger: GTCCACGCTCCTCATTGAGCAACGGAAGCTGGATGA...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAGCAGACACTTGACCTaGTCCTGGCCCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSRHLT*SWPSLI
Trigger: GATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATGTGGGTATGCCCCACTaGGCTCCAGGCTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENVGMPH*APGSPC
Trigger: GCATGGAGAGCCTGGAGCCCAGTGGGGCATACCCAC...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACTCCGCAGCCCCACGTaGGCCGAGGAAGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRLRSPT*AEEGRG
Trigger: GCCACGGCCTTCCTCGGCCCACGTGGGGCTGCGGAG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGGCTGGGTCAGGGTGTaGCCATTGCTTCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEGWVRV*PLLLCI
Trigger: GATGCACAGAAGCAATGGTCACACCCTGACCCAGCC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCACATCCTGAAGAGCTaGCAGTTCTCTGTATGGCCT +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVHILKS*QFSVWP
Trigger: AGGCCATACAGAGAACTGTCAGCTCTTCAGGATGTG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCGAGTGAGGTCGGCCTaGAGGCTCACTGCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFRVRSA*RLTAPV
Trigger: CACAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATAAGGAACTGGGGCACTaGTGGCTCCAGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENKELGH*WLQDGG
Trigger: ACCCCCATCCTGGAGCCAGCAGTGCCCCAGTTCCTT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCAGCCATCTTGTTGCATaGTCCCTGAGGGGCTATGTA +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVSHLVA*SLRGYV
Trigger: TACATAGCCCCTCAGGGAGCATGCAACAAGATGGCT...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATAGTGCTGCTCCCCGTTaGCTAGGGGTTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDSAAPR*LGVQLT
Trigger: AGTCAGCTGAACCCCTAGGCAACGGGGAGCAGCACT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGCCGGTCGGCCACGCTaGTCTCCGGGAAACGCATCC +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGAGRPR*SPGNAS
Trigger: GGATGCGTTTCCCGGAGAGCAGCGTGGCCGACCGGC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATGCGTGGAGCAGGCCTTaGCATCGCGCTCGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYAWSRP*HRARRD
Trigger: GTCTCTTCGAGCGCGATGGCAAGGCCTGCTCCACGC...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCGCGCTCTGCTGGAACTaGTTCAGCTCGGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFALCWN*FSSGPD
Trigger: GTCGGGGCCCGAGCTGAAGCAGTTCCAGCAGAGCGC...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCCATGCCAAGCAGCATTaGCTGTTACTGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSHAKQH*LLLCCG
Trigger: CCCACAGCACAGTAACAGGCAATGCTGCTTGGCATG...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAGAGGTGAGGTGTTCTaGGCTGACGAAGTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSRGEVF*ADEVRG
Trigger: GCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCTCTCCATGCTCCCCTaGGAGCTGCACTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPLSMLP*ELHWSG
Trigger: CCCTGACCAGTGCAGCTCCCAGGGGAGCATGGAGAG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGAGTCTCTCTTGTTATaGAAGTGGCTGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEESLLL*KWLSWS
Trigger: TGACCAGCTCAGCCACTTCCATAACAAGAGAGACTC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCACTGTCACTCCGAGCTaGAGGCAGGGGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPTVTPS*RQGCTH
Trigger: GTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATCACCTGGGCAAAGTGTaGCTCCAGGGAAGGTACCGG +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENHLGKV*LQGRYR
Trigger: CCGGTACCTTCCCTGGAGCCACACTTTGCCCAGGTG...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGATGAGAAGGCTGACTTaGTCTTGCCAAAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEMRRLT*SCQSCL
Trigger: CAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCAT...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGGCGCGCTCACGCAGTaGCCCGGGCTCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGGALTQ*PGLLEA
Trigger: AGCCTCCAGGAGCCCGGGCCACTGCGTGAGCGCGCC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGGGTTTCTGCAACTGTaGCCGGCAGGAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGGFLQL*PAGAWP
Trigger: AGGCCACGCTCCTGCCGGCCACAGTTGCAGAAACCC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATAGGAGGATGGCTCCCTaGGGGTCTCATCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENRRMAP*GSHPLS
Trigger: AGAGAGGGGATGAGACCCCCAGGGAGCCATCCTCCT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATCGAGGGGTGAGATGGTaGAAGAGCGGCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDRGVRW*KSGSIS
Trigger: AGAGATGCTGCCGCTCTTCCACCATCTCACCCCTCG...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTGCCAGTGGTGGCCTaGGGCAGGGTGTCCTACTGG +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLPVVA*GRVSYW
Trigger: CCAGTAGGACACCCTGCCCCAGGCCACCACTGGCAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGGCTGGACGTGGCCTTaGGGTGCGGATCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGGWTWP*GADPSQ
Trigger: TTGTGAGGGATCCGCACCCCAAGGCCACGTCCAGCC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGGATGACCATGCAGTGTaGCTGTTGAATGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEDDHAV*LLNAVT
Trigger: AGTGACAGCATTCAACAGCCACACTGCATGGTCATC...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCACTGTAGACGTTTGCTaGCTGTCTTCCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVTVDVC*LSSTWL
Trigger: AAGCCAGGTGGAAGACAGCCAGCAAACGTCTACAGT...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAATGTTATGGAAGTGGCTaGGCTGGTCAATGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQECYGSG*AGQCCR
Trigger: CCGGCAGCATTGACCAGCTCAGCCACTTCCATAACA...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGTTGTTGCATGCTCCCTaGGGGGCTATGTATCCACTC +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLLLHAP*GAMYPL
Trigger: GAGTGGATACATAGCCCCTCAGGGAGCATGCAACAA...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCATGCAGTGTGGCTGTTaGATGCTGTCACTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVMQCGC*MLSLVL
Trigger: TAGAACCAGTGACAGCATTCAACAGCCACACTGCAT...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAGGTTCAGACTGCAATaGGCTGTTATCGCACCACTC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSRFRLQ*AVIAPL
Trigger: GAGTGGTGCGATAACAGCTCATTGCAGTCTGAACCT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGATGCAGATCGTATCCTaGCCACACTTTGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEMQIVS*PHFEKP
Trigger: TGGTTTCTCAAAGTGTGGTCAGGATACGATCTGCAT...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTGGCTCACTGCGCCTGTaGTTCAGCCGAAGTTTAACC +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPGSLRL*FSRSLT
Trigger: GGTTAAACTTCGGCTGAAGCACAGGCGCAGTGAGCC...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCACGGTGCCGAAATGCTaGGTAACTGTCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFTVPKC*VTVTPS
Trigger: GCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGT...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTGTCACTGGTTCTACTaGTTTCCTGGGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSCHWFY*FPGRQD
Trigger: GTCCTGTCTCCCAGGAAAGCAGTAGAACCAGTGACA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTGTTATCGCACCACTCTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPVIAPL*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGAGTGGTGCGATAAC...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGAGGAAGGTTGTCCGTaGCAGTCTCCAAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDEEGCP*QSPRNW
Trigger: CCAGTTCCTTGGAGACTGCCACGGACAACCTTCCTC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGCCAGGGCGCTCTGCTaGAACTGCTTCAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYARALC*NCFSSG
Trigger: GCCCGAGCTGAAGCAGTTCCAGCAGAGCGCCCTGGC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCTGCTCGAGAAGGAGGTaGCCACTGAGGCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPCSRRR*PLRQRD
Trigger: GTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCA...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGAAGGCTGTCCTCTCTaGCTGCGTGGGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGEGCPL*LRGPTL
Trigger: CAAAGTGGGCCCACGCAGCCAGAGAGGACAGCCTTC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGAGGGAGATCCTCCCTaGAGTGCTCGGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGEGDPP*SARGPK
Trigger: CTTGGGGCCCCGAGCACTCCAGGGAGGATCTCCCTC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGGTCTTCCACCTGGCTTaGCTTGTGAGGGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLVFHLA*LVRAHS
Trigger: TGAATGAGCCCTCACAAGCCAAGCCAGGTGGAAGAC...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGCTGAGATGGGAGGATaGCTTGAGCCTCAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDAEMGG*LEPQRF
Trigger: GAACCTCTGAGGCTCAAGCCATCCTCCCATCTCAGC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 72 bp CAGTCAAATCCCGAAAAATGGTCATCTCGAAGAGTGTaGGGAACTGGGAGCCCCCTGGATTCCTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QSNPEKWSSRRV*GTGSPLDSSEE
Trigger: TTCCTCAGAGGAATCCAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATGACCATTTTTCGGGATTTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATAAGTTTAACCCCTCCTaGCCACGCTGCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDKFNPS*PRCFPV
Trigger: CACAGGAAAGCAGCGTGGTCAGGAGGGGTTAAACTT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGGGCCGATCATACCCTaGGATATCTGCATCATGCTG +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDGPIIP*DICIML
Trigger: CAGCATGATGCAGATATCTCAGGGTATGATCGGCCC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCGGGCCTCCCTACCTTaGAGCAGCAGGGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYRASLP*SSRAEE
Trigger: CTCTTCAGCCCTGCTGCTTCAAGGTAGGGAGGCCCG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGGGACTGTGCGTCCTTaGTGCTGTTCCGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGGTVRP*CCSGRR
Trigger: GCGCCTACCGGAACAGCATCAAGGACGCACAGTCCC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGAAGGAGGTGGCCACTaGGGCAGCGAGACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGEGGGH*GSETLF
Trigger: GAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTTACACCGGGGTTTCCTaGCTCGGTGGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFYTGVS*LGGGGG
Trigger: CCCACCTCCTCCACCGAGTCAGGAAACCCCGGTGTA...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATGCTTGCAGAGCTCGCTaGTCAGAGCCTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYACRAR*SEPPPL
Trigger: AAGAGGTGGAGGCTCTGATCAGCGAGCTCTGCAAGC...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGCTCCTGGCCCAGCTTaGTCTTGTCATCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPAPGPA*SCHPAS
Trigger: GGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCGTATTCTGAAACCCTaGCCAACAACATGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVRILKP*PTTCSL
Trigger: TAAGGAGCATGTTGTTGGTCAGGGTTTCAGAATACG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGAGCAAACATTCTCAGTaGCATCACGCGTATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLESKHSQ*HHAYSE
Trigger: TTCAGAATACGCGTGATGTCACTGAGAATGTTTGCT...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGTGATGATCAGCCACTaGTGCGGCCGCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYVMISH*CGRHSH
Trigger: GTGGCTGTGGCGGCCGCAGCAGTGGCTGATCATCAC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCACCTCATCCCCAGCCTaGAGTTTGGAGCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPTSSPA*SLELRV
Trigger: CACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCGTCACCTCATTGATGTaGACAACCTCATCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFVTSLM*TTSSPA
Trigger: GGCTGGGGATGAGGTTGTGCACATCAATGAGGTGAC...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGACACGCTGCTTTCCTGTaGTGGGGGCCAGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGHAAFL*WGPEVR
Trigger: CCTCACCTCTGGCCCCCAGCACAGGAAAGCAGCGTG...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATCTCACGGTGCCGAAATaGTGCGTAACTGTCACTCCG +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENLTVPK*CVTVTP
Trigger: CGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAG...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAGCACAGTATGCAGCTaGTCCTCTATGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSTVCS*SSMNGD
Trigger: GTCTCCATTCATAGAGGAGCAGCTGCATACTGTGCT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATACTCTCCTTGGCCAGTaGAGGGTAGAGCATACCGTT +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDTLLGQ*RVEHTV
Trigger: AACGGTATGCTCTACCCTGCACTGGCCAAGGAGAGT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATTGGTCTTGCCAAAGTTaGCTGACAGGCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDWSCQS*LTGSGL
Trigger: TAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCA...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCATCCCCTCTCTGGGTaGCCCTTGTTCCACCGTTTG +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYHPLSG*PLFHRL
Trigger: CAAACGGTGGAACAAGGGGCACCCAGAGAGGGGATG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACAGCCCTTGCGTTCCTaGCAGTGGTGGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRQPLRS*QWWPGA
Trigger: TGCCCCAGGCCACCACTGGCAGGAACGCAAGGGCTG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGCTGCACCAGGCATGTaGCTTTCCCTTGCAATTGTC +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEAAPGM*LSLAIV
Trigger: GACAATTGCAAGGGAAAGGCACATGCCTGGTGCAGC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATCCTTTCCTGGAACCTTaGGGGTGGCTGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENPFLEP*GWLEYL
Trigger: CAGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGG...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCAACATGTAGTGACATaGCCAGGAACTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVQHVVT*PGTSQV
Trigger: CACTTGAGAAGTTCCTGGGCATGTCACTACATGTTG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGGAAAGATGACAGGGTaGGTATGCCCCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPGKMTG*VCPTGL
Trigger: GAGCCCAGTGGGGCATACCCACCCTGTCATCTTTCC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAATCATGTTCTAAGGGCTaGCAGAAGGCAAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQESCSKG*QKANPG
Trigger: GCCTGGGTTTGCCTTCTGCCAGCCCTTAGAACATGA...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTGGCGGGAGATGACCTaGACCTCACATGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFWREMT*TSHGQG
Trigger: GCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCTGCTTCTGTGCATCATaGCAGGGGTGTAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPCFCAS*QGCRAG
Trigger: TCCCGCCCTACACCCCTGCCATGATGCACAGAAGCA...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCAGTCTGGATGGGTGCTaGCTGCCCACCAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFSLDGC*LPTKRP
Trigger: GGGTCTCTTGGTGGGCAGCCAGCACCCATCCAGACT...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAACCATACTCAGTCCAGTaGAAGCGCAGAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEPYSVQ*KRRMPA
Trigger: AGCAGGCATTCTGCGCTTCCACTGGACTGAGTATGG...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCGAACTGGGAGCCCCCTaGATTCCTCTGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFELGAP*IPLRNF
Trigger: GAAATTCCTCAGAGGAATCCAGGGGGCTCCCAGTTC...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCATCTCGAAGAGTGTTaGGAACTGGGAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYHLEEC*ELGAPW
Trigger: CCAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCCTGGAACCTTGCGGGTaGCTGGAGTATCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFLEPCG*LEYLHL
Trigger: CAAATGCAGATACTCCAGCCACCCGCAAGGTTCCAG...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 72 bp CTCAGGCACTTTCACTGTGGATCCTCCCTTCATTCTTaGGGGTTAAGTGGCCACCGCAAGAAACAAAACAGC +
Preference number: 4 (lower is better)
Translates to: LRHFHCGSSLHS*GLSGHRKKQNS
Trigger: GCTGTTTTGTTTCTTGCGGTGGCCACTTAACCCCAAAGAATGAAGGGAGGATCCACAGTGAAAGTGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTTGAAGCAGCAGGGCTaGAGAGTTCACCTCATACTC +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFLKQQG*RVHLIL
Trigger: GAGTATGAGGTGAACTCTTCAGCCCTGCTGCTTCAA...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCTACTCACAGAAGGCTaGGGCACCTGGGCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYLLTEG*GTWAKC
Trigger: ACACTTTGCCCAGGTGCCTCAGCCTTCTGTGAGTAG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTTGGGTCTGTGCTGTTaGAAGAAGCCGAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLGLCC*KKPRHR
Trigger: CCGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCTGGAAGCCAGTGTCTaGCTACCTACCACATGGGCT +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPLEASV*LPTTWA
Trigger: AGCCCATGTGGTAGGTAGTCAGACACTGGCTTCCAG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCCCCCCTGGATTCCTCTaGGGAATTTCACTAAGAATA +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSPPGFL*GISLRI
Trigger: TATTCTTAGTGAAATTCCTCAGAGGAATCCAGGGGG...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAACTCAGGCAAGCAGTaGTTCTACAGCACAAGTTGT +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSNSGKQ*FYSTSC
Trigger: ACAACTTGTGCTGTAGAAGCACTGCTTGCCTGAGTT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGCAGTGGTCCTCATCATaGCAAACACATGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLQWSSS*QTHDPS
Trigger: TGAGGGATCATGTGTTTGGCATGATGAGGACCACTG...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCGGAGCTCAGGGTGTCTaGTTTGCCCCCTTCTTCGAC +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFGAQGV*FAPFFD
Trigger: GTCGAAGAAGGGGGCAAAGCAGACACCCTGAGCTCC...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATTGCTCCCCTGGGAGCTaGACTGGTCAGGGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHCSPGS*TGQGSA
Trigger: GGCGGAGCCCTGACCAGTGCAGCTCCCAGGGGAGCA...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTTCTCCAGCACAGTATaGAGCTGCTCCTCTATGAAT +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSFSSTV*SCSSMN
Trigger: ATTCATAGAGGAGCAGCTGCATACTGTGCTGGAGAA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATCTGGATGTGTGCGGGTaGGAGGGGGCAGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHLDVCG*EGAGGS
Trigger: AGAGCCGCCTGCCCCCTCGCACCCGCACACATCCAG...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAGCCGCTTGCCGGTCTTaGGCTGGATGTAGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRAACRS*AGCSPP
Trigger: TGGCGGACTACATCCAGCGCAAGACCGGCAAGCGGC...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATAATCACCAATGGCTTTaGAGCCTGAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDNHQWL*SLNHPN
Trigger: GTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCCCTCTTCTACCCCATaGTCTGGGCCATCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYPSSTP*SGPSPS
Trigger: TGAGGGCGATGGCCCAGAGCATGGGGTAGAAGAGGG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTATGGTACTTGTACCCTaGCATCAGGATACACTGCCC +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPMVLVP*HQDTLP
Trigger: GGGCAGTGTATCCTGATGGCAGGGTACAAGTACCAT...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCAAAACTTCCTTCAGTaGCGCTCTGAAGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVQNFLQ*RSEDCF
Trigger: AAAGCAATCTTCAGAGCGCCACTGAAGGAAGTTTTG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCAGAAGTATTGTCCATaGAGCCTGAACGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPQKYCP*SLNAPG
Trigger: GCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGTACCGGGTAGATGCTaGTCGGCAGCAGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYVPGRC*SAAEVG
Trigger: GCCAACCTCTGCTGCCGACCAGCATCTACCCGGTAC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATTCTCTCATTGGAATGTaGGCTGTTGCCTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENSLIGM*AVALGR
Trigger: CCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGA...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGTCTCATCCCCTCTCTaGGTGCCCCTTGTTCCACCG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGVSSPL*VPLVPP
Trigger: CGGTGGAACAAGGGGCACCCAGAGAGGGGATGAGAC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGACCAGCCAAATAACATaGATCCTTCACAAGACCAAA +
Preference number: 4 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLETSQIT*ILHKTK
Trigger: TTTGGTCTTGTGAAGGATCCATGTTATTTGGCTGGT...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTCAGTAGCTCAGCCTTaGGAGCAGACACACTGTAGT +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFSVAQP*EQTHCS
Trigger: ACTACAGTGTGTCTGCTCCCAAGGCTGAGCTACTGA...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATATTCTGGGTTCTCACTaGAGCCCCCAAGTGGTATAC +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENILGSH*SPQVVY
Trigger: GTATACCACTTGGGGGCTTCAGTGAGAACCCAGAAT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTGTCATAGACTGTCTTaGCATAGCGAATATCTGCCT +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSCHRLS*HSEYLP
Trigger: AGGCAGATATTCGCTATGTCAAGACAGTCTATGACA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCGGCAGAGCCGTTTCTaGTCAAGGCTAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYRQSRF*SRLDQE
Trigger: CTCCTGGTCTAGCCTTGATCAGAAACGGCTCTGCCG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATTGCCTTGGGGAGGTGTaGGATGTCTCTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYCLGEV*DVSSGR
Trigger: CCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCA...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGAGCCTGAGGGCATTTaGGGCTGTGGGGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGEPEGI*GCGDEK
Trigger: CTTCTCATCCCCACAGCCTCAAATGCCCTCAGGCTC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACTTCTGCCTTGGTGTTaGCTGCACAGGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRLLPWC*LHRWAC
Trigger: GCAGGCCCACCTGTGCAGTCAACACCAAGGCAGAAG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGTGTTCTGATGTCTTCTaGACTCTTCTGAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLCSDVF*TLLRIR
Trigger: CCTGATCCTCAGAAGAGTTCAGAAGACATCAGAACA...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTTGGGAATGAAATCTaGGGGCAGGCTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLGNEI*GQALQQ
Trigger: CTGCTGGAGAGCCTGCCCTCAGATTTCATTCCCAAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGAGGGGGACACACACTaGTCCATGTTGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFEGDTH*SMLPQP
Trigger: AGGCTGAGGCAACATGGATCAGTGTGTGTCCCCCTC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGGGAGACAGGACCTCTaGATGAAAACATCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGGRQDL*MKTSLG
Trigger: TCCCAGGGATGTTTTCATTCAGAGGTCCTGTCTCCC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCAGGCTGACTTGGTCTTaGCAAAGTTGCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPRLTWS*QSCLTG
Trigger: GCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGACGATCTCGGGGAGCCTaGTGGGTTTCTGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGRSRGA*WVSATV
Trigger: CACAGTTGCAGAAACCCAGCAGGCTCCCCGAGATCG...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCCAAAGCCACTGTCTTaGCCCAAAAGCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPPKPLS*PKSTSW
Trigger: CCAGGATGTGCTTTTGGGGCAAGACAGTGGCTTTGG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAATTGGGGTCAGGGGTaGAGCCCTGGTGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFNWGQG*SPGVCD
Trigger: GTCACAGACACCAGGGCTGCACCCCTGACCCCAATT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATGCGTGGGCCCACTTTaGTCGAGAAGGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRCVGPL*SRRRWP
Trigger: TGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGACGTGGCCTTGGGGTaGGGATCCCTCACAAACACT +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFDVALG*GSLTNT
Trigger: AGTGTTTGTGAGGGATCCGCACCCCAAGGCCACGTC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTTGAGTCTGGATGGGTaGTGGCTGCCCACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLSLDG*WLPTKR
Trigger: TCTCTTGGTGGGCAGCCAGCACCCATCCAGACTCAA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAACTCAGAGGTTCAGACTaGAATGAGCTGTTATCGCAC +
Preference number: 4 (lower is better)
Translates to: QSSGSAECLLVLVKIRQELRGSD*NELLSH
Trigger: GTGCGATAACAGCTCATTGCAGTCTGAACCTCTGAG...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATGCTGCCGGTGGACTTaGCAGGGGAAAGATGACAGG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGCCRWT*QGKDDR
Trigger: CCTGTCATCTTTCCCCTGCCAAGTCCACCGGCAGCA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACAGTCTCCAAGGAACTaGGGCACTGCTGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRQSPRN*GTAGSR
Trigger: CCTGGAGCCAGCAGTGCCCCAGTTCCTTGGAGACTG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATTGCCTGACAGGCTCTaGCCTAGGCCTTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGLPDRL*PRPSLS
Trigger: GGAGAGAGAAGGCCTAGGCCAGAGCCTGTCAGGCAA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTCGCTGCTCGAATTTaGAGACCTTCTCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLAARI*RPSPAP
Trigger: CGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAGCTGGAAGGTGCTCTaGCTACGGAGGAGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGSWKVL*LRRSRA
Trigger: CGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATCCTCTCTGGCTGCGTaGGCCCACTTTGCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGSSLAA*AHFARE
Trigger: TTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGAGGA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAATAATCCTCATGAGGTaGCGGGGAGTCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGIILMR*RGVPQD
Trigger: GTCCTGCGGGACTCCCCGCCACCTCATGAGGATTAT...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCCCAAATCAACAAAGGTaGCCACCAGCCACAGATCAA +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFPNQQR*PPATDQ
Trigger: TTGATCTGTGGCTGGTGGCCACCTTTGTTGATTTGG...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCGCTTTCAGATGTTTGTaGCATGCCAAGCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFAFRCL*HAKQHC
Trigger: GCAATGCTGCTTGGCATGCCACAAACATCTGAAAGC...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGAAGTGGCCCAGGAAGTaGAGGCCTCCTGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGKWPRK*RPPDFL
Trigger: GAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTT...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGCCAGAGGGAATGGCTaGAGGCAGAGGGGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGARGNG*RQRGAN
Trigger: ATTGGCACCCCTCTGCCTTCAGCCATTCCCTCTGGC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCTGGAGCTGCTCCTCTaGAAGGTAATTGGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYLELLL*KVIGQD
Trigger: ATCTTGGCCAATTACCTTTCAGAGGAGCAGCTCCAG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGATGGGAGGATGGCTTaGGCCTCAGAGGTTCAGACT +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGDGRMA*ASEVQT
Trigger: AGTCTGAACCTCTGAGGCTCAAGCCATCCTCCCATC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFRGTSI*MAWVCA
Trigger: TGCACAGACCCAGGCCATGCAGATACTGGTGCCTCT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGACATAGCGAATATCTaGCTGCCTCATCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPDIANI*LPHPFE
Trigger: CTCGAAGGGATGAGGCAGGCAGATATTCGCTATGTC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTCCCTTGCTCTCGCTaGTCGAATTTGGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLPCSR*SNLETF
Trigger: GAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCCTGGGTCAGAAGTGCTaGATAAACTTGGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFLGQKC*INLEDS
Trigger: AGAGTCTTCCAAGTTTATGCAGCACTTCTGACCCAG...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTGTCTGGGTCAGAAGTaGTGCATAAACTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFCLGQK*CINLED
Trigger: GTCTTCCAAGTTTATGCAGCACTTCTGACCCAGACA...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGAGGGAAGTCATCCATaGTATACACCGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPEGSHP*YTPGFP
Trigger: AGGAAACCCCGGTGTATAGCATGGATGACTTCCCTC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGCACTACTCGCTCCCTaGGATCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFALLAP*DPGSPS
Trigger: TGAAGGAGAACCTGGATCGCAGGGAGCGAGTAGTGC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGGTAATTGGCCAAGATaGCCAGCACTACTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFGNWPR*PALLAP
Trigger: GGGAGCGAGTAGTGCTGGGCATCTTGGCCAATTACC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTGGTGGCTGGAGTATCTaGATTTGGAGTATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPGGWSI*IWSIAR
Trigger: TCTTGCAATACTCCAAATGCAGATACTCCAGCCACC...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACCCCAGCCTGCAGTTTaGAGCTCAGGGTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRPQPAV*SSGCLL
Trigger: AAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGGTCAATGCTGCCGGTaGACTTGGCAGGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYGQCCR*TWQGKD
Trigger: ATCTTTCCCCTGCCAAGTCCACCGGCAGCATTGACC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGCCTCCTCCAGAGGTTaGCATTGTGGTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYASSRG*HCGLPG
Trigger: TCCAGGAAGACCACAATGCCAACCTCTGGAGGAGGC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATGACCTGGACCTCACATaGACAGGGCCCGCAAGGACG +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHDLDLT*TGPART
Trigger: CGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTC...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACCCAAAAGCACATCCTaGCGCTTGTCTGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGPKSTS*RLSAVA
Trigger: CGCCACCGCAGACAAGCGCCAGGATGTGCTTTTGGG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATTTCAGGCTCCCATGTTaGCCTAAGACTGATGACCAT +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENFRLPC*PKTDDH
Trigger: ATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAA...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGACATTGTCCTTTCCTaGAACCTTGCGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYDIVLS*NLAGGW
Trigger: CCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTAAGCCAACATTTCCTTaGGTATCCAGAGACCCAGTA +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPKPTFP*VSRDPV
Trigger: TACTGGGTCTCTGGATACCCAAGGAAATGTTGGCTT...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 72 bp CCCAAATCTTGTTCAGGAGAACAGCATGGGCTCCGTTaGAATTTTGTTGGATTCTGGACGTCCTCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PKSCSGEQHGLR*NFVGFWTSSSY
Trigger: ATAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAATGGCTTTGCAGCCTaGACCACCCCAACGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGNGFAA*TTPTRG
Trigger: ACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATGTCTGACCGTCCTGTaGGCAGTAGCCAGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRCLTVL*AVARGN
Trigger: ATTCCCTCTGGCTACTGCTCACAGGACGGTCAGACA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATGCAAAATCAGGGGCTaGGGATTCCTCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGCKIRG*GFLRKA
Trigger: AGCCTTCCTGAGGAATCCTCAGCCCCTGATTTTGCA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATTGTGGACTCAGCCTCTaGACCCTTGATAGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYCGLSL*TLDRSL
Trigger: CAAACTTCTATCAAGGGTTCAGAGGCTGAGTCCACA...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATTCTTCTGAACTCTTCTaGGGATCAGGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENSSELF*GSGLTF
Trigger: GAAAGTCAGTCCTGATCCTCAGAAGAGTTCAGAAGA...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGTGTCCAAATCCCCTATaGACATCCTATACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLCPNPL*TSYTCQ
Trigger: TTGACAAGTATAGGATGTTCATAGGGGATTTGGACA...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATACCTGGCTTGGCTTGTaGGGGCTCATTCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYTWLGL*GLIQYQ
Trigger: CTGATACTGAATGAGCCCTCACAAGCCAAGCCAGGT...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCCCATTATTTAGTTTCTaGATGAGCTCCCCATTAAGA +
Preference number: 4 (lower is better)
Translates to: HSLGCTTCSKYKATAISSPLFSF*MSSPLR
Trigger: TCTTAATGGGGAGCTCATTCAGAAACTAAATAATGG...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCTCCTCCCTCCAGGAATaGCTCCAGATAAATGTACCT +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPSSLQE*LQINVP
Trigger: AGGTACATTTATCTGGAGGCATTCCTGGAGGGAGGA...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCATGCTGGCATCGGGTTaGTTCTCCCCAGATTTAGTT +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPMLASG*FSPDLV
Trigger: AACTAAATCTGGGGAGAAGCAACCCGATGCCAGCAT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGGTTTGTTACTGTGGGTaGTCTTTCTCTCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLVCYCG*SFSHWN
Trigger: ATTCCAATGAGAGAAAGAGCACCCACAGTAACAAAC...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATAGAGAAACGAATGTGTaGTTTTGTCTCCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDRETNV*FCLLEV
Trigger: GACTTCGAGGAGACAAAAGCACACATTCGTTTCTCT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACAAGACACGGGACTGTaGGTCCTTGATGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRQDTGL*VLDAVP
Trigger: CGGAACAGCATCAAGGACGCACAGTCCCGTGTCTTG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTCAGGGTGTGACCATTaGTTCTGTGCATCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFSGCDH*FCASWQ
Trigger: CTGCCATGATGCACAGAAGCAATGGTCACACCCTGA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCATAACTGTAGACGTTTaGTGGCTGTCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPITVDV*WLSSTW
Trigger: CCAGGTGGAAGACAGCCAGCAAACGTCTACAGTTAT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACTCCTCCAGGAATTCTaGGTTCTCACTGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRLLQEF*VLTEAP
Trigger: GGGGGCTTCAGTGAGAACCCAGAATTCCTGGAGGAG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGATGGAAGTGGCTGAGCTaGTCAATGCTGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGWKWLS*SMLPVD
Trigger: GTCCACCGGCAGCATTGACCAGCTCAGCCACTTCCA...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCGGCTCTTCGGGACTTaGGTCTGTGCTGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFRLFGT*VCAVER
Trigger: TCTTTCAACAGCACAGACCCAAGTCCCGAAGAGCCG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACAACGAGGGGTGAGATaGTGGAAGAGCGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGQRGVR*WKSGSI
Trigger: GATGCTGCCGCTCTTCCACCATCTCACCCCTCGTTG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGGCAGGGTGTCCTACTaGCTTGCCTCTGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGGRVSY*LASDGP
Trigger: TGGACCATCAGAGGCAAGCCAGTAGGACACCCTGCC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGTTCTACTGCTTTCCTaGGAGACAGGACCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGVLLLS*ETGPLN
Trigger: ATTCAGAGGTCCTGTCTCCCAGGAAAGCAGTAGAAC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATTCAGAGTCACCTCATTaGTGTGCACAACCTCATCCC +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYSESPH*CAQPHP
Trigger: GGGATGAGGTTGTGCACATCAATGAGGTGACTCTGA...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATCCCCAGCCTTGGGAATaGAATCTGAGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHPQPWE*NLRAGS
Trigger: AGAGCCTGCCCTCAGATTTCATTCCCAAGGCTGGGG...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAGACAGGACCTCTGAATaGAAACATCCCTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGDRTSE*KHPWET
Trigger: GGTTTCCCAGGGATGTTTTCATTCAGAGGTCCTGTC...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAGAAGTGGAGGCCTCCTaGTTTTCTCGCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIREVEAS*FSRRTL
Trigger: CAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTC...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATAGAAAGCACTTACTATaGTTCGGCTCACTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDRKHLL*FGSLQN
Trigger: ATTCTGAAGTGAGCCGAAGCATAGTAAGTGCTTTCT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAAGGTACCGGGTAGATaGTGGTCGGCAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGKVPGR*WSAAEV
Trigger: AACCTCTGCTGCCGACCAGCATCTACCCGGTACCTT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGTCTTCATTCCTCTTaGCTTCACATCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGCLHSS*LHILKS
Trigger: GCTCTTCAGGATGTGAAGGCAAGAGGAATGAAGACA...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATGCCATCAGGATACACTaGCCACCAGCAAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHAIRIH*PPARKA
Trigger: GGCCTTCCTTGCTGGTGGGCAGTGTATCCTGATGGC...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAAGTATCTGCATGGCCTaGGTCTGTGCACACATCTCT +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGSICMA*VCAHIS
Trigger: AGAGATGTGTGCACAGACCCAGGCCATGCAGATACT...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCTTGGCTGTAGCTTCTaGTTTCTTCTCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYLGCSF*FLLHWG
Trigger: TCCCCAGTGGAGAAGAAACCAGAAGCTACAGCCAAG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCAACAGAAATGGACTTTaGAGGGGACATACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPNRNGL*RGHTWL
Trigger: CAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTT...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACAGAGGTTGGCATTGTaGTCTTCCTGGAAATCGCCC +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRQRLAL*SSWKSP
Trigger: GGGCGATTTCCAGGAAGACCACAATGCCAACCTCTG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGAAGAGGTTCAAATGTaGGGCTGGACGTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGEEVQM*GWTWPW
Trigger: CCAAGGCCACGTCCAGCCCCACATTTGAACCTCTTC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATTTCAGGAGAACAGCATaGGCTCCGTTTGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENFRRTA*APFEFC
Trigger: ACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAA...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTCAAATCCCGAAAAATaGTCATCTCGAAGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFSNPEK*SSRRVL
Trigger: CAACACTCTTCGAGATGACCATTTTTCGGGATTTGA...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCTTTCAAAGTCTCACTTaGTGCCTTACCCATTTCACA +
Preference number: 4 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFFQSLT*CLTHFT
Trigger: TGTGAAATGGGTAAGGCACCAAGTGAGACTTTGAAA...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATAGTTTCCAGCAGACTTaGTTTTGTCATAGCAATTGG +
Preference number: 4 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDSFQQT*FCHSNW
Trigger: CCAATTGCTATGACAAAACCAAGTCTGCTGGAAACT...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 72 bp ACAGCCTCAATAAACAGGCCGTATTTAGCCCAAATCTaGTTCAGGAGAACAGCATGGGCTCCGTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: TASINRPYLAQI*FRRTAWAPFEF
Trigger: AAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATTTGGGCTAAATACGGCCTGTTTATTGAGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATTGCGCACTACCAGCCTaGGGGTCTTGTAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHCALPA*GSCRIL
Trigger: AAGGATCCTACAAGACCCTCAGGCTGGTAGTGCGCA...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAGCTTCCGTTGCTCAATaGGGAGCGTGGACTTCATTT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRASVAQ*GAWTSF
Trigger: AAATGAAGTCCACGCTCCTCATTGAGCAACGGAAGC...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCACACTGATCCATGTTaGCTCAGCCTGTTAAAAACT +
Preference number: 4 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPHTDPC*LSLLKT
Trigger: AGTTTTTAACAGGCTGAGGCAACATGGATCAGTGTG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAGTGTGGCTGTTGAATaGTGTCACTGGTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFSVAVE*CHWFYC
Trigger: GCAGTAGAACCAGTGACAGCATTCAACAGCCACACT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCATTGCCTGTTACTGTaGTGTGGGAGTCAATTACTT +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYHCLLL*CGSQLL
Trigger: AAGTAATTGACTCCCACAGCACAGTAACAGGCAATG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAACTGAAGCCCCCAAGTaGTATACATCTCTACTCCGT +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGTEAPK*YTSLLR
Trigger: ACGGAGTAGAGATGTATACCACTTGGGGGCTTCAGT...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTGTGGAAGTCTTCAGTaGTCCTCATCATGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFCGSLQ*SSSCQT
Trigger: TGTTTGGCATGATGAGGACCACTGAAGACTTCCACA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGACTCTTGTTATGGAAGTaGCTGAGCTGGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGLLLWK*LSWSML
Trigger: CAGCATTGACCAGCTCAGCCACTTCCATAACAAGAG...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGTGGGGATGAGAAGATaGTTTGTTACTGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFVGMRR*FVTVGA
Trigger: AGCACCCACAGTAACAAACCATCTTCTCATCCCCAC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAAGGGCTCTGAGAGCCTaGAAGATCTCTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRRALRA*KISCLH
Trigger: GTGAAGACAAGAGATCTTCCAGGCTCTCAGAGCCCT...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACACTTGACCTGCTCCTaGCCCAGCTTGATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGHLTCS*PSLILS
Trigger: TGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGCTGTAAACATAGCCTaGCTGCCAGCCCATAACCTC +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGAVNIA*LPAHNL
Trigger: GAGGTTATGGGCTGGCAGCCAGGCTATGTTTACAGC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATAAACAGCATGAGAAATaGCTGAGTCAACCAACATGT +
Preference number: 4 (lower is better)
Translates to: QKINQEGQEGKRLPPGENKQHEK*LSQPTC
Trigger: ACATGTTGGTTGACTCAGCCATTTCTCATGCTGTTT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTGCTGGCATCTCTTTaGTTTTGTTCAGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFLLASL*FCSVAQ
Trigger: CTGAGCTACTGAACAAAATCAAAGAGATGCCAGCAG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATTCTTCACGCTCAACGTaGCTATCTTTGGAATTCATT +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYSSRST*LSLEFI
Trigger: AATGAATTCCAAAGATAGTCACGTTGAGCGTGAAGA...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAGCATGGGCTCCGTTTaGATTTTGTTGGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFSMGSV*ILLDSG
Trigger: TCCAGAATCCAACAAAATTCAAACGGAGCCCATGCT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTACATCACGCGTATTCTaGAACCCTGACCAACAACAT +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFTSRVF*NPDQQH
Trigger: ATGTTGTTGGTCAGGGTTTCAGAATACGCGTGATGT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCAAGATTATCTCACCTaGGTTCTGACCAGAAGTGTA +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFQDYLT*VLTRSV
Trigger: TACACTTCTGGTCAGAACTCAGGTGAGATAATCTTG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAATTAATGGTTCTCCGTaGTCCAGGCCACCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRINGSP*SRPPFR
Trigger: TCTAAAGGGTGGCCTGGAGCACGGAGAACCATTAAT...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAGAGATATCTGCATCATaGTGGCATCGGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIREISAS*WHRVAS
Trigger: AGAAGCAACCCGATGCCAGCATGATGCAGATATCTC...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGCTGCATTTGGAGTATTaGAAGATTATCTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGLHLEY*KIISPE
Trigger: CTCAGGTGAGATAATCTTGCAATACTCCAAATGCAG...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAATATCTGCATCATGCTaGCATCGGGTTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGISASC*HRVASP
Trigger: GGGAGAAGCAACCCGATGCCAGCATGATGCAGATAT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATGGTTTCTTCTCCACTaGGGACAGCAAGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRWFLLH*GQQVMF
Trigger: GAACATGACTTGCTGTCCCCAGTGGAGAAGAAACCA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACATTCCCAGAAGTACTaGAAGTTGAGACGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRHSQKY*KLRRSC
Trigger: ACAGGACCGTCTCAACTTCCAGTACTTCTGGGAATG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACTGAGTTCCACTGACTaGATCATGGCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGLSSTD*IMAEAL
Trigger: CAAAGCCTCAGCCATGATCCAGTCAGTGGAACTCAG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTAAAAGACATCTCTACTaGAGACCCAAACTACAATTT +
Preference number: 4 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPKRHLY*RPKLQF
Trigger: AAATTGTAGTTTGGGTCTCCAGTAGAGATGTCTTTT...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGCCTGTTACTGTGCTGTaGGAGTCAATTACTTTTATG +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGPVTVL*ESITFM
Trigger: CATAAAAGTAATTGACTCCCACAGCACAGTAACAGG...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAACCTTGCGGGTGGCTaGAGTATCTGCATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGNLAGG*SICIWS
Trigger: ACTCCAAATGCAGATACTCCAGCCACCCGCAAGGTT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCAGGCACTTTCACTGTaGATCCTCCCTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFQALSL*ILPSFF
Trigger: AAAGAATGAAGGGAGGATCCACAGTGAAAGTGCCTG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGCCAGCACTACCATaGACAATTAAACTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AIALVDYAKETSGWPVVYKPALP*TIKLKR
Trigger: TCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTT...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCTCATTTTCAGGCACTaGACAGAAATGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYLIFRH*TEMDFG
Trigger: TCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGATTGAGGCTGTGGGGATaGGAAGATGGTTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGLRLWG*EDGLLL
Trigger: CAGTAACAAACCATCTTCTCATCCCCACAGCCTCAA...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATTTGGGAAAATACCACTaGAAGTACAGCCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHLGKYH*KYSPQQ
Trigger: CTGCTGGGGGCTGTACTTTCAGTGGTATTTTCCCAA...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAGCCATAGCTTTGGTTaGCTATGCAAAGGAAACTTC +
Preference number: 4 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFSHSFG*LCKGNF
Trigger: GAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAATCTCACCTGAGTTCTaGCCAGAAGTGTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRISPEF*PEVYLQ
Trigger: TTGGAGATACACTTCTGGTCAGAACTCAGGTGAGAT...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGATTAAAAGACAGCCACTaGTTCTTAGGGGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGLKDSH*FLGVDP
Trigger: TGGGTCCACCCCTAAGAATCAGTGGCTGTCTTTTAA...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAAACCAACATGCTCACTaGTTCCTTGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGNQHAH*FLVFIP
Trigger: AGGAATGAAGACAAGGAAGCAGTGAGCATGTTGGTT...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCGCCAAAAGAGAGGTTTaGAGAAGCAAATTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFAKREV*RSKFFH
Trigger: ATGGAAGAATTTGCTTCTCCAAACCTCTCTTTTGGC...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATAAACTGCCTCCTTTCTaGAGCTGCTCAGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHKLPPF*SCSESP
Trigger: AGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAGTTT...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGATCCTTTCTTCATTACTaGCATCTTCACCAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGSFLHY*HLHQGR
Trigger: GCGGCCTTGGTGAAGATGCCAGTAATGAAGAAAGGA...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGAAGGAAACTTCTGGGTaGCCAGTTGTTTATAAGTTA +
Preference number: 4 (lower is better)
Translates to: APKNKAIALVDYAKETSGKETSG*PVVYKL
Trigger: TAACTTATAAACAACTGGCCACCCAGAAGTTTCCTT...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGCCACAGATCAAACGTaGAAAAACAAATCTACCTCT +
Preference number: 4 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYATDQT*KNKSTS
Trigger: AGAGGTAGATTTGTTTTTTCACGTTTGATCTGTGGC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAGCATGAGAAATGGCTaGGTCAACCAACATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGSMRNG*VNQHVV
Trigger: CACTACATGTTGGTTGACTCAGCCATTTCTCATGCT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGACTGCCAGATCCATTCTaGTTCCCATTCTCATCAATG +
Preference number: 4 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGLPDPF*FPFSSM
Trigger: CATTGATGAGAATGGGAACCAGAATGGATCTGGCAG...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTCATTCACTTCTGCTaGCATCTCTTTGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLIHFC*HLFDFV
Trigger: AACAAAATCAAAGAGATGCCAGCAGAAGTGAATGAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTATAAATTAGAAAAGTaGCTGGGTGAAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFYKLEK*LGEVAH
Trigger: ATGAGCCACTTCACCCAGCCACTTTTCTAATTTATA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATTCTTTGGGGTTAAGTaGCCACCGCAAGAAACAAAA +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRFFGVK*PPQETK
Trigger: TTTTGTTTCTTGCGGTGGCCACTTAACCCCAAAGAA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
3UTR CAA 72 bp TCCTTACTGTTCTCATGGTCTTGGCAAAGGATACTGTaGGGAGAAAGAAGAATGGTTTCTACTGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: SLLFSWSWQRIL*GERRMVSTVNE
Trigger: CTCATTTACAGTAGAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR TCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACCCTTCACATTCACTTaGCCACTTTTTATACCTTGT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRPFTFT*PLFIPC
Trigger: ACAAGGTATAAAAAGTGGTCAAGTGAATGTGAAGGG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATCTGGAAACCAGCTGTaGAAAACAAACCCTAAAATG +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRSGNQL*KTNPKM
Trigger: CATTTTAGGGTTTGTTTTGCACAGCTGGTTTCCAGA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATGCTAGAGATTTGTCTTaGTGGACAATTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHARDLS*WTISLA
Trigger: GGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGC...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAAATTTTGTTGGATTCTaGACGTCCTCCTCCTATTAT +
Preference number: 4 (lower is better)
Translates to: LNENIPGKPRCCLICINGNFVGF*TSSSYY
Trigger: ATAATAGGAGGAGGACGTCCAGAATCCAACAAAATT...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATCTGTTCTCATGGTCTTaGCAAAGGATACTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHLFSWS*QRILLG
Trigger: TCCCAACAGTATCCTTTGCCAAGACCATGAGAACAG...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTGGAGTATCTGCATTTaGAGTATTGCAAGATTATCT +
Preference number: 4 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFWSICI*SIARLS
Trigger: AGATAATCTTGCAATACTCCAAATGCAGATACTCCA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CCA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATGGTTTCGACAGCATCTaGTCTCATAGAGAAACTCAG +
Preference number: 4 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHGFDSI*SHRETQ
Trigger: CTGAGTTTCTCTATGAGACCAGATGCTGTCGAAACC...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR GCA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATGGCGCTCTGAAGATTaGTTTTCTGAGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRWRSED*FSELLF
Trigger: AAATAAAAGCTCAGAAAAGCAATCTTCAGAGCGCCA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 90 bp TCAGGCGCCGGCGAGCACCTCTCCGGGCGGCAGGGGGCACGGGCCTaGCCAGGTCGCCCTCAGCAGGGGTCACGCTGTGCCGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: SGAGEHLSGRQGARA*PGRPQQGSRCAAPG
Trigger: CCCGGGAGCGGCACAGCGTGACCCCTGCTGAGGGCGACCTGGCCAGGCCCGTGCCCCCTGCCGCCCGGAGAGGTGCTCGCCGGCGCCTGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CGCGGGGCCGGGCTGGAGGTAGGCACTCTGGGCGCGCTCACGCAGTaGCCCGGGCTCCTGGAGGCTGCAGCCGGCGGCGGAGGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: RGAGLEVGTLGALTQ*PGLLEAAAGGGGRP
Trigger: CGGCCTACCTCCGCCGCCGGCTGCAGCCTCCAGGAGCCCGGGCCACTGCGTGAGCGCGCCCAGAGTGCCTACCTCCAGCCCGGCCCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CCTCCCTGCGGGGCTGCAGGCTGGGCTCCCGCAGTGAGCTCAAGCTaGAGGCCGAGGCGAGGCCGGAGCCTTCGAGCGCCGCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PPCGAAGWAPAVSSS*RPRRGRSLRAPRGR
Trigger: CCGGCCCCGCGGCGCTCGAAGGCTCCGGCCTCGCCTCGGCCTCCAGCTTGAGCTCACTGCGGGAGCCCAGCCTGCAGCCCCGCAGGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GAAGAGCCGAGGCGCTGCCTGGGCCGGGCCCCCTCCGGCCCAGACTaGATGTGTGCGGGTGCGAGGGGGCAGGCGGCTCTTCGGGACTTG +
Preference number: 5 (lower is better)
Translates to: EEPRRCLGRAPSGPD*MCAGARGQAALRDL
Trigger: CAAGTCCCGAAGAGCCGCCTGCCCCCTCGCACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp CGCGTCGCCGTTCCCCGAGGCGGCGGCCACCGGCGAAGGAGCTGCTaGGATCTCGGGGAGCCTGCTGGGTTTCTGCAACTGTGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: RVAVPRGGGHRRRSC*DLGEPAGFLQLWPA
Trigger: TGCCGGCCACAGTTGCAGAAACCCAGCAGGCTCCCCGAGATCGCAGCAGCTCCTTCGCCGGTGGCCGCCGCCTCGGGGAACGGCGACGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GCGAGCCGGGCCTGTCCCGCCACTCGGGCTCCCTCTCTGGCTCGCTaGAGAGCTGGAAGGTGCTCTGGCTACGGAGGAGCCGAGCGTCCG +
Preference number: 5 (lower is better)
Translates to: ASRACPATRAPSLAR*RAGRCSGYGGAERP
Trigger: CGGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCGGGACAGGCCCGGCTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTGGCTTGGGGGAGGTaGCCTAGAGGCACGGTTCTGGCCCAGGAAGGATCCGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GPRLAHRGGLVAWGR*PRGTVLAQEGSAGA
Trigger: GGCTCCTGCGGATCCTTCCTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000485780.1
ENST00000490690.1
CDS TCA 90 bp CTCTGGGGGCCACGGCCGCTGTCCGACGCTCCTCCGCTCAGCTGCTaGCCGCAGGGCTGCCGGGAAGCCTCTTCCAACTTCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: LWGPRPLSDAPPLSC*PQGCREASSNFSSP
Trigger: CGGGGAGCTGAAGTTGGAAGAGGCTTCCCGGCAGCCCTGCGGTCAGCAGCTGAGCGGAGGAGCGTCGGACAGCGGCCGTGGCCCCCAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GTGGGGCTTCCCGTACTGAAAGCCCTGAAGAGCCGAGGCGCTGCCTaGGCCGGGCCCCCTCCGGCCCAGACTGGATGTGTGCGGGTGCGA +
Preference number: 5 (lower is better)
Translates to: VGLPVLKALKSRGAA*AGPPPAQTGCVRVR
Trigger: TCGCACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTCAGGGCTTTCAGTACGGGAAGCCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GGCCTGTCCCGCCACTCGGGCTCCCTCTCTGGCTCGCTGGAGAGCTaGAAGGTGCTCTGGCTACGGAGGAGCCGAGCGTCCGGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GLSRHSGSLSGSLES*KVLWLRRSRASGLW
Trigger: CCAGAGGCCGGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCGGGACAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CGATTCGGGCGAGCCGGGCCTGTCCCGCCACTCGGGCTCCCTCTCTaGCTCGCTGGAGAGCTGGAAGGTGCTCTGGCTACGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: RFGRAGPVPPLGLPL*LAGELEGALATEEP
Trigger: CGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCGGGACAGGCCCGGCTCGCCCGAATCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CTGTCCTGCGTGACACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTaGTGGCTTGGGGGAGGTGGCCTAGAGGCACGGTTCTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LSCVTLGQGWPTAGA*WLGGGGLEARFWPR
Trigger: CCTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS GCA 90 bp AGCAGTGGGGCTTCCCGTACTGAAAGCCCTGAAGAGCCGAGGCGCTaGCTGGGCCGGGCCCCCTCCGGCCCAGACTGGATGTGTGCGGGT +
Preference number: 5 (lower is better)
Translates to: SSGASRTESPEEPRR*LGRAPSGPDWMCAG
Trigger: ACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTCAGGGCTTTCAGTACGGGAAGCCCCACTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp CCTGCTGGGTTTCTGCAACTGTGGCCGGCAGGAGCGTGGCCTCCCTaGGGGGCTGCAGGCTGGGCTCCCGCAGTGAGCTCAAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PAGFLQLWPAGAWPP*GAAGWAPAVSSSWR
Trigger: CCTCCAGCTTGAGCTCACTGCGGGAGCCCAGCCTGCAGCCCCGCAGGGAGGCCACGCTCCTGCCGGCCACAGTTGCAGAAACCCAGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp AGGAGCTGCTGCGATCTCGGGGAGCCTGCTGGGTTTCTGCAACTGTaGCCGGCAGGAGCGTGGCCTCCCTGCGGGGCTGCAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RSCCDLGEPAGFLQL*PAGAWPPCGAAGWA
Trigger: AGCCCAGCCTGCAGCCCCGCAGGGAGGCCACGCTCCTGCCGGCCACAGTTGCAGAAACCCAGCAGGCTCCCCGAGATCGCAGCAGCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CGTGACACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTGGCTTaGGGGAGGTGGCCTAGAGGCACGGTTCTGGCCCAGGAAGGATCC +
Preference number: 5 (lower is better)
Translates to: RDTGPRLAHRGGLVA*GRWPRGTVLAQEGS
Trigger: GGATCCTTCCTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 90 bp TCCTGCGTGACACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTaGCTTGGGGGAGGTGGCCTAGAGGCACGGTTCTGGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SCVTLGQGWPTAGAW*LGGGGLEARFWPRK
Trigger: CTTCCTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 90 bp GCGGGGGCTTGGTGGCTTGGGGGAGGTGGCCTAGAGGCACGGTTCTaGCCCAGGAAGGATCCGCAGGAGCCAGCCCGAGGAAGACAGAGC +
Preference number: 5 (lower is better)
Translates to: AGAWWLGGGGLEARF*PRKDPQEPARGRQS
Trigger: GCTCTGTCTTCCTCGGGCTGGCTCCTGCGGATCCTTCCTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000485780.1
ENST00000490690.1
CDS CCA 90 bp TCCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTGGACCTCACATaGACAGGGCCCGCAAGGACGTCCGAGCGTTCCAGCAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: SWRLSAVAGDDLDLT*TGPARTSERSSRSS
Trigger: CGAGGACCTGCTGGAACGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp ACCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTGGACCTCACATaGACAGGGCCCGCAAGGACGTCCGAGCGTTCCAGCAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TWRLSAVAGDDLDLT*TGPARTSERSSRSS
Trigger: CGAGGACCTGCTGGAACGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS TCA 90 bp CTTGCTGGTTGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGATaGCCTGGACCTCACATGGACAGGGCCCGCAAGGACGTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: LAGCTYLALVCGGGR*PGPHMDRARKDVRA
Trigger: CGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 90 bp ACTGGATGTGTGCGGGTGCGAGGGGGCAGGCGGCTCTTCGGGACTTaGGTCTGTGCTGTTGAAAGAAGCCGAGGCACCGGTCCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: TGCVRVRGGRRLFGT*VCAVERSRGTGPPL
Trigger: GAGGGGAGGACCGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAAGTCCCGAAGAGCCGCCTGCCCCCTCGCACCCGCACACATCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GGGTGCAGCCCTGGTGTCTGTGACCAGCCCTTGCGTTCCTGCCAGTaGTGGCCTGGGGCAGGGTGTCCTACTGGCTTGCCTCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: GCSPGVCDQPLRSCQ*WPGAGCPTGLPLMV
Trigger: GACCATCAGAGGCAAGCCAGTAGGACACCCTGCCCCAGGCCACCACTGGCAGGAACGCAAGGGCTGGTCACAGACACCAGGGCTGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS TCA 90 bp TTGCCCCAAAAGCACATCCTGGCGCTTGTCTGCGGTGGCGGGAGATaGCCTGGACCTCACATGGACAGGGCCCGCAAGGACGTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: LPQKHILALVCGGGR*PGPHMDRARKDVRA
Trigger: CGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCTTTTGGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 90 bp CAGGTCTCGACGTCGAAAGGAGGTGGCCCCCAAGACACGGGACTGTaGGTCCTTGATGCTGTTCCGGTAGGCGCGGCTGAAGGGGGCATC +
Preference number: 5 (lower is better)
Translates to: QVSTSKGGGPQDTGL*VLDAVPVGAAEGGI
Trigger: GATGCCCCCTTCAGCCGCGCCTACCGGAACAGCATCAAGGACGCACAGTCCCGTGTCTTGGGGGCCACCTCCTTTCGACGTCGAGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp GCTGCTCTCCGGGAAACGCATCCCATTTCTCTGCGGGCCCAGGGGTaGCGGTTCGGCCTCCTCCACGATCCCCACCTCGTTCATCTTCTC +
Preference number: 5 (lower is better)
Translates to: AALRETHPISLRAQG*RFGLLHDPHLVHLL
Trigger: GAGAAGATGAACGAGGTGGGGATCGTGGAGGAGGCCGAACCGGCACCCCTGGGCCCGCAGAGAAATGGGATGCGTTTCCCGGAGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GGGCCGCTCACGGTGCCGAAATGCTGCGTAACTGTCACTCCGAGCTaGAGGCAGGGGTGCACCCACCTTAGGAGGAAGGTTGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: GPLTVPKCCVTVTPS*RQGCTHLRRKVVRG
Trigger: GCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GACCGGGAGGCTGGGTCAGGGTGTGACCATTGCTTCTGTGCATCATaGCAGGGGTGTAGGGCGGGAGAGGCTGTCGCCCTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: DREAGSGCDHCFCAS*QGCRAGEAVALSDR
Trigger: ACGGTCAGACAGGGCGACAGCCTCTCCCGCCCTACACCCCTGCCATGATGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp AGGCAGCGAGACCCTCTTCCTCGTTCCCTCTTCTACCCCATGCTCTaGGCCATCGCCCTCACAGCCTCTTGGACCGGGAGGCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RQRDPLPRSLFYPML*AIALTASWTGRLGQ
Trigger: CTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGGCCCAGAGCATGGGGTAGAAGAGGGAACGAGGAAGAGGGTCTCGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp TGGTTGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTaGACCTCACATGGACAGGGCCCGCAAGGACGTCCGAGCGTTCCA +
Preference number: 5 (lower is better)
Translates to: WLHVPGACLRWREMT*TSHGQGPQGRPSVP
Trigger: TGGAACGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 90 bp GAGGCCAGGACTTGCTGGTTGCACGTACCTGGCGCTTGTCTGCGGTaGCGGGAGATGACCTGGACCTCACATGGACAGGGCCCGCAAGGA +
Preference number: 5 (lower is better)
Translates to: EARTCWLHVPGACLR*REMTWTSHGQGPQG
Trigger: TCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS GCA 90 bp CTGATCAAGGCTAGACCAGGAGCTGGGCCGCTCACGGTGCCGAAATaGTGCGTAACTGTCACTCCGAGCTGGAGGCAGGGGTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: LIKARPGAGPLTVPK*CVTVTPSWRQGCTH
Trigger: GTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCTAGCCTTGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp CCTCACAGCCTCTTGGACCGGGAGGCTGGGTCAGGGTGTGACCATTaGTTCTGTGCATCATGGCAGGGGTGTAGGGCGGGAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PHSLLDREAGSGCDH*FCASWQGCRAGEAV
Trigger: GACAGCCTCTCCCGCCCTACACCCCTGCCATGATGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp CCAAAAGCACATCCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTaGACCTCACATGGACAGGGCCCGCAAGGACGTCCGAGCGTTCCA +
Preference number: 5 (lower is better)
Translates to: PKAHPGACLRWREMT*TSHGQGPQGRPSVP
Trigger: TGGAACGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCTTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp GTTATCTGTTGGTCATTTCTGTCCTGCGTGACACTGGGCCAAGGCTaGCCCACCGCGGGGGCTTGGTGGCTTGGGGGAGGTGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: VICWSFLSCVTLGQG*PTAGAWWLGGGGLE
Trigger: CTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS TCA 90 bp TCTCTGGCTGCGTGGGCCCACTTTGCTCGAGAAGGAGGTGGCCACTaGGGCAGCGAGACCCTCTTCCTCGTTCCCTCTTCTACCCCATGC +
Preference number: 5 (lower is better)
Translates to: SLAAWAHFAREGGGH*GSETLFLVPSSTPC
Trigger: GCATGGGGTAGAAGAGGGAACGAGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 90 bp ATCAAGGCTAGACCAGGAGCTGGGCCGCTCACGGTGCCGAAATGCTaGGTAACTGTCACTCCGAGCTGGAGGCAGGGGTGCACCCACCTT +
Preference number: 5 (lower is better)
Translates to: IKARPGAGPLTVPKC*VTVTPSWRQGCTHL
Trigger: AAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCTAGCCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp GAGGCACCTGGGCAAAGTGTGGCTCCAGGGAAGGTACCGGGTAGATaGTGGTCGGCAGCAGAGGTTGGCCAGGTTGGGCCTTCTGGGTAT +
Preference number: 5 (lower is better)
Translates to: EAPGQSVAPGKVPGR*WSAAEVGQVGPSGY
Trigger: ATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTGCCCAGGTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp GGATTCCTCAGGAAGGCTGTCCTCTCTGGCTGCGTGGGCCCACTTTaGTCGAGAAGGAGGTGGCCACTGAGGCAGCGAGACCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GFLRKAVLSGCVGPL*SRRRWPLRQRDPLP
Trigger: AGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGAGGACAGCCTTCCTGAGGAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp GCTGTCCTCTCTGGCTGCGTGGGCCCACTTTGCTCGAGAAGGAGGTaGCCACTGAGGCAGCGAGACCCTCTTCCTCGTTCCCTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: AVLSGCVGPLCSRRR*PLRQRDPLPRSLFY
Trigger: GTAGAAGAGGGAACGAGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGAGGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp GAGGAAGGGACAGTTCGAGGCCAGGACTTGCTGGTTGCACGTACCTaGCGCTTGTCTGCGGTGGCGGGAGATGACCTGGACCTCACATGG +
Preference number: 5 (lower is better)
Translates to: EEGTVRGQDLLVART*RLSAVAGDDLDLTW
Trigger: CCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS TCA 90 bp TGCAGGCTCACTGCGCCTGTGCTTCAGCCGAAGTTTAACCCCTCCTaGCCACGCTGCTTTCCTGTGCTGGGGGCCAGAGGTGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: CRLTAPVLQPKFNPS*PRCFPVLGARGEVF
Trigger: GAACACCTCACCTCTGGCCCCCAGCACAGGAAAGCAGCGTGGTCAGGAGGGGTTAAACTTCGGCTGAAGCACAGGCGCAGTGAGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000646790.1
CDS TCA 90 bp CTGGGAACCTGGGCTGCCCTGATTAGCCAAACACAAAAGGCAGTTTaGATGACTGCCTCCTCCCGGCCAATCGCCGGCCGCCTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: LGTWAALISQTQKAV*MTASSRPIAGRLPD
Trigger: GTCAGGCAGGCGGCCGGCGATTGGCCGGGAGGAGGCAGTCATTCAAACTGCCTTTTGTGTTTGGCTAATCAGGGCAGCCCAGGTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490690.1
CDS GCA 90 bp CAGGCAGGTCCATTGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTaGGTGACACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: QAGPLSSVICWSFLS*VTLGQGWPTAGAWW
Trigger: CCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 90 bp GCACCTGGGCAAAGTGTGGCTCCAGGGAAGGTACCGGGTAGATGCTaGTCGGCAGCAGAGGTTGGCCAGGTTGGGCCTTCTGGGTATAGT +
Preference number: 5 (lower is better)
Translates to: APGQSVAPGKVPGRC*SAAEVGQVGPSGYS
Trigger: ACTATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTGCCCAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CGCCCACACTCGGTCTCTGGCTCCCTTGCTCTCGCTGCTCGAATTTaGAGACCTTCTCCAGCACCGAGCAGTGGGGCTTCCCGTACTGAA +
Preference number: 5 (lower is better)
Translates to: RPHSVSGSLALAARI*RPSPAPSSGASRTE
Trigger: TTCAGTACGGGAAGCCCCACTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGAGTGTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp TCCCTCTTCTACCCCATGCTCTGGGCCATCGCCCTCACAGCCTCTTaGACCGGGAGGCTGGGTCAGGGTGTGACCATTGCTTCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: SLFYPMLWAIALTAS*TGRLGQGVTIASVH
Trigger: ATGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGGCCCAGAGCATGGGGTAGAAGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp GGAGTCCCGCAGGACAGACTCAGATATTCGGAGGGAGATCCTCCCTaGAGTGCTCGGGGCCCCAAGAGGTGTGTCTGGGTCAGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: GVPQDRLRYSEGDPP*SARGPKRCVWVRSA
Trigger: AGCACTTCTGACCCAGACACACCTCTTGGGGCCCCGAGCACTCCAGGGAGGATCTCCCTCCGAATATCTGAGTCTGTCCTGCGGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp GTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCATCGCCGCTCGCCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: VRCSGLTKLEAPVSA*PGSVHTSHRRSPRG
Trigger: GCCGCGAGGCGAGCGGCGATGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 90 bp GGGTGGGGTAGATACAACCTTTCTGTGGCCATCGTGCTGCCCAGGTaGGACGTGGAGACCACCACTTCACCCAAGGTGGTCGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: GWGRYNLSVAIVLPR*DVETTTSPKVVDSS
Trigger: GGAGCTGTCGACCACCTTGGGTGAAGTGGTGGTCTCCACGTCCCACCTGGGCAGCACGATGGCCACAGAAAGGTTGTATCTACCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS TCA 90 bp CTGGCATCGGGTTGCTTCTCCCCAGATTTAGTTGTGTGCCACGAGTaGGGTCGGCCTGCAGGCTCACTGCGCCTGTGCTTCAGCCGAAGT +
Preference number: 5 (lower is better)
Translates to: LASGCFSPDLVVCHE*GRPAGSLRLCFSRS
Trigger: ACTTCGGCTGAAGCACAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000646790.1
CDS TCA 90 bp CAGGTCCATTGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGCGTaGCACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: QVHCPQLSVGHFCPA*HWAKAGPPRGLGGL
Trigger: CAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS GCA 90 bp GTGCCGAAATGCTGCGTAACTGTCACTCCGAGCTGGAGGCAGGGGTaGACCCACCTTAGGAGGAAGGTTGTCCGTGGCAGTCTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: VPKCCVTVTPSWRQG*THLRRKVVRGSLQG
Trigger: TCCTTGGAGACTGCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp CCCGCAGGACAGACTCAGATATTCGGAGGGAGATCCTCCCTGGAGTaGTCGGGGCCCCAAGAGGTGTGTCTGGGTCAGAAGTGCTGCATA +
Preference number: 5 (lower is better)
Translates to: PAGQTQIFGGRSSLE*SGPQEVCLGQKCCI
Trigger: TATGCAGCACTTCTGACCCAGACACACCTCTTGGGGCCCCGAGCACTCCAGGGAGGATCTCCCTCCGAATATCTGAGTCTGTCCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 90 bp CCACTAAAGCTTCTAGGGAGGAAGGGACAGTTCGAGGCCAGGACTTaGTGGTTGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGATG +
Preference number: 5 (lower is better)
Translates to: PLKLLGRKGQFEART*WLHVPGACLRWREM
Trigger: CATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCCTAGAAGCTTTAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS GCA 90 bp GTTGTGCTGGGTGGGGTAGATACAACCTTTCTGTGGCCATCGTGCTaGCCAGGTGGGACGTGGAGACCACCACTTCACCCAAGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: VVLGGVDTTFLWPSC*PGGTWRPPLHPRWS
Trigger: CGACCACCTTGGGTGAAGTGGTGGTCTCCACGTCCCACCTGGGCAGCACGATGGCCACAGAAAGGTTGTATCTACCCCACCCAGCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS CCA 90 bp GCCTCATCCCTTCGAGGAGGCCACCTCGAGCAGAAGTATTGTCCATaGAGCCTGAACGCTCCCGGCCAGAGATGCCAGGGTGTGGATACT +
Preference number: 5 (lower is better)
Translates to: ASSLRGGHLEQKYCP*SLNAPGQRCQGVDT
Trigger: AGTATCCACACCCTGGCATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGAAGGGATGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CATACCGTTGCTACTCACAGAAGGCTGAGGCACCTGGGCAAAGTGTaGCTCCAGGGAAGGTACCGGGTAGATGCTGGTCGGCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HTVATHRRLRHLGKV*LQGRYRVDAGRQQR
Trigger: CCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTGCCCAGGTGCCTCAGCCTTCTGTGAGTAGCAACGGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CTAAAGCTTCTAGGGAGGAAGGGACAGTTCGAGGCCAGGACTTGCTaGTTGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGATGACC +
Preference number: 5 (lower is better)
Translates to: LKLLGRKGQFEARTC*LHVPGACLRWREMT
Trigger: GGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCCTAGAAGCTTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 90 bp TCGTGCTGCCCAGGTGGGACGTGGAGACCACCACTTCACCCAAGGTaGTCGACAGCTCCACTCATGGCGTCCATCAGCAGTAGAGACACT +
Preference number: 5 (lower is better)
Translates to: SCCPGGTWRPPLHPR*STAPLMASISSRDT
Trigger: AGTGTCTCTACTGCTGATGGACGCCATGAGTGGAGCTGTCGACCACCTTGGGTGAAGTGGTGGTCTCCACGTCCCACCTGGGCAGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS-3UTR CAA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCGCCCTCACAGCCTCTaGGACCGGGAGGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVRPHSL*DREAGS
Trigger: TGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS GCA 90 bp AGAGGTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTCATCGCCGCTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: RGEVFWADEVRGTSI*MAWVCAHISSPLAS
Trigger: CGAGGCGAGCGGCGATGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 90 bp CATTGTGGTCTTCCTGGAAATCGCCCTCCCAGGGCTCTGAGAGCCTaGAAGATCTCTTGTCTTCACCCGCTTGCCAGGCCTGAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: HCGLPGNRPPRALRA*KISCLHPLARPEPE
Trigger: CTCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTTCCAGGCTCTCAGAGCCCTGGGAGGGCGATTTCCAGGAAGACCACAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS-3UTR CAA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCGCGGAGGTAGGCCGCTaGCCGGTCTTGCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: HSLGCTTCSKYKATAISSAEVGR*PVLRWM
Trigger: CATCCAGCGCAAGACCGGCAAGCGGCCTACCTCCGC...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCTCTCTGGGTGCCCCTaGTTCCACCGTTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLELSGCP*FHRLLR
Trigger: GCGGAGCAAACGGTGGAACAAGGGGCACCCAGAGAG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS GCA 90 bp TGCTTCAGCCGAAGTTTAACCCCTCCTGACCACGCTGCTTTCCTGTaGTGGGGGCCAGAGGTGAGGTGTTCTGGGCTGACGAAGTTAGAG +
Preference number: 5 (lower is better)
Translates to: CFSRSLTPPDHAAFL*WGPEVRCSGLTKLE
Trigger: CTCTAACTTCGTCAGCCCAGAACACCTCACCTCTGGCCCCCAGCACAGGAAAGCAGCGTGGTCAGGAGGGGTTAAACTTCGGCTGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCTGCGCACTACCAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VRCSGLTKLEAPVSA*PGSVHTSLRTTSLR
Trigger: CCTCAGGCTGGTAGTGCGCAGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000469923.5
CDS CCA 90 bp TCCACTGACTGGATCATGGCTGAGGCTTTGAGTCTGGATGGGTGCTaGCTGCCCACCAAGAGACCCAGCAAGTTGGGCGTGAACGCTCAT +
Preference number: 5 (lower is better)
Translates to: STDWIMAEALSLDGC*LPTKRPSKLGVNAH
Trigger: ATGAGCGTTCACGCCCAACTTGCTGGGTCTCTTGGTGGGCAGCCAGCACCCATCCAGACTCAAAGCCTCAGCCATGATCCAGTCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp GTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCCCGGAGCCAGAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: VRCSGLTKLEAPVSA*PGSVHTSPGARAKQ
Trigger: CTGCTTTGCTCTGGCTCCGGGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS TCA 90 bp CCAGGGAAACTGCCTCCTTTCTGGAGCTGCTCAGAGTCACCTCATTaGTGTGCACAACCTCATCCCCAGCCTGCAGTTTGGAGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PGKLPPFWSCSESPH*CAQPHPQPAVWSSG
Trigger: CCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAGTTTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS TCA 90 bp CTGGCATCGGGTTGCTTCTCCCCAGATTTAGTTGTGTGCCACGAGTaGGGTCGGCCTGCAGGCTCACTGCGCCTTGTGGCAAATAGAAAC +
Preference number: 5 (lower is better)
Translates to: LASGCFSPDLVVCHE*GRPAGSLRLVANRN
Trigger: GTTTCTATTTGCCACAAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS GCA 90 bp CTGCTCAGAGTCACCTCATTGATGTGCACAACCTCATCCCCAGCCTaGAGTTTGGAGCTCAGGGTGTCTGCTTTGCCCCCTTCTTCGACC +
Preference number: 5 (lower is better)
Translates to: LLRVTSLMCTTSSPA*SLELRVSALPPSST
Trigger: GGTCGAAGAAGGGGGCAAAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000497440.5
CDS GCA 90 bp AGAGGTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTCTGCGCACTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: RGEVFWADEVRGTSI*MAWVCAHISAHYQP
Trigger: AGGCTGGTAGTGCGCAGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000469923.5
CDS GCA 90 bp AGAGGTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTCCCGGAGCCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: RGEVFWADEVRGTSI*MAWVCAHISRSQSK
Trigger: TTTGCTCTGGCTCCGGGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS CCA 90 bp CCCCAACGAGGGGTGAGATGGTGGAAGAGCGGCAGCATCTCTTCTTaGCCTCTTTCTGAACAACTGAGTGACCTAGATCCAGGACCAGCC +
Preference number: 5 (lower is better)
Translates to: PQRGVRWWKSGSISS*PLSEQLSDLDPGPA
Trigger: GGCTGGTCCTGGATCTAGGTCACTCAGTTGTTCAGAAAGAGGCCAAGAAGAGATGCTGCCGCTCTTCCACCATCTCACCCCTCGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS TCA 90 bp AGGACATTCACTAGGAACGGAGGAATCACCAATGGCTTTGCAGCCTaGACCACCCCAACGAGGGGTGAGATGGTGGAAGAGCGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: RTFTRNGGITNGFAA*TTPTRGEMVEERQH
Trigger: ATGCTGCCGCTCTTCCACCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTCCTCCGTTCCTAGTGAATGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS TCA 90 bp TCACAAGTACTACATGTGCCTCCAGTTGGACGGCCTGAATCGCCTTaGACTTGCCCAGCTCAGCGCAAGTGGGAGGGACTCTCAATGCCA +
Preference number: 5 (lower is better)
Translates to: SQVLHVPPVGRPESP*TCPAQRKWEGLSMP
Trigger: TGGCATTGAGAGTCCCTCCCACTTGCGCTGAGCTGGGCAAGTTCAAGGCGATTCAGGCCGTCCAACTGGAGGCACATGTAGTACTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS TCA 90 bp GGTAAAAGCCTCACAAGTACTACATGTGCCTCCAGTTGGACGGCCTaGATCGCCTTGAACTTGCCCAGCTCAGCGCAAGTGGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: GKSLTSTTCASSWTA*IALNLPSSAQVGGT
Trigger: AGTCCCTCCCACTTGCGCTGAGCTGGGCAAGTTCAAGGCGATTCAGGCCGTCCAACTGGAGGCACATGTAGTACTTGTGAGGCTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS GCA 90 bp CTATGTATCCACTCTCCTTGGCCAGTGCAGGGTAGAGCATACCGTTaGTACTCACAGAAGGCTGAGGCACCTGGGCAAAGTGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LCIHSPWPVQGRAYR*YSQKAEAPGQSVAP
Trigger: TGGAGCCACACTTTGCCCAGGTGCCTCAGCCTTCTGTGAGTAGCAACGGTATGCTCTACCCTGCACTGGCCAAGGAGAGTGGATACATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp TTTGGGTCCCAAGTCTGGGAAGCATCAGAGCCAGGCAGCCGCCCTTaGTTACCACCATATCCACAACAGGCCAGCAATGAGATTGGCATG +
Preference number: 5 (lower is better)
Translates to: FGSQVWEASEPGSRP*LPPYPQQASNEIGM
Trigger: CATGCCAATCTCATTGCTGGCCTGTTGTGGATATGGTGGTAAGCAAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTGGGACCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CCA 90 bp TTGGCCAGGTTGGGCCTTCTGGGTATAGTTATGCTTGGGCTTCACTaGGGGGCTGTTCTCTGGACTCTTCTCCAGCACAGTATGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LARLGLLGIVMLGLH*GAVLWTLLQHSMQL
Trigger: CAGCTGCATACTGTGCTGGAGAAGAGTCCAGAGAACAGCCCCCCAGTGAAGCCCAAGCATAACTATACCCAGAAGGCCCAACCTGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp AAGGAAGTCTATGCCCAGGCAGGTCCATTGTCCTCAGTTATCTGTTaGTCATTTCTGTCCTGCGTGACACTGGGCCAAGGCTGGCCCACC +
Preference number: 5 (lower is better)
Translates to: KEVYAQAGPLSSVIC*SFLSCVTLGQGWPT
Trigger: GGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS-3UTR CAA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGTTGGAATGTGGGCTGTaGCCTTGGGGAGGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLELECGL*PWGGVR
Trigger: TCTCACACCTCCCCAAGGCAACAGCCCACATTCCAA...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCCGGTCTCTGGCTCCCTaGCTCTCGCTGCTCGAATTT +
Preference number: 5 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVRSLAP*LSLLEF
Trigger: AAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCG...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCAAGTGCTGCTCCCCGTaGCCTAGGGGTTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: HSLGCTTCSKYKATAISSKCCSP*PRGSAD
Trigger: GTCAGCTGAACCCCTAGGCAACGGGGAGCAGCACTT...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGAGCACATCCTGGCGCTaGTCTGCGGTGGCGGGAGAT +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLSTSWR*SAVAGD
Trigger: ATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCT...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS TCA 90 bp TCGACAGCTCCACTCATGGCGTCCATCAGCAGTAGAGACACTAAATaGGGTTCGAGTCCTAGGAGGCATCCTCTGGGGATGTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: STAPLMASISSRDTK*GSSPRRHPLGMLRV
Trigger: GACCCTCAACATCCCCAGAGGATGCCTCCTAGGACTCGAACCTCATTTAGTGTCTCTACTGCTGATGGACGCCATGAGTGGAGCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS GCA 90 bp GAAACTGCCTCCTTTCTGGAGCTGCTCAGAGTCACCTCATTGATGTaGACAACCTCATCCCCAGCCTGCAGTTTGGAGCTCAGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ETASFLELLRVTSLM*TTSSPACSLELRVS
Trigger: AGACACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS GCA 90 bp GACTCCCCTCCGGGTGTCATAGACTGTCTTGACATAGCGAATATCTaGCTGCCTCATCCCTTCGAGGAGGCCACCTCGAGCAGAAGTATT +
Preference number: 5 (lower is better)
Translates to: DSPPGVIDCLDIANI*LPHPFEEATSSRSI
Trigger: AATACTTCTGCTCGAGGTGGCCTCCTCGAAGGGATGAGGCAGGCAGATATTCGCTATGTCAAGACAGTCTATGACACCCGGAGGGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp CTGTGCACACATCTCCCGGAGCCAGAGCAAAGCAGCACAGCTAAGTaGAGGGTTCTAAGCCTGCACCTAACAAAGTTCTCTGCCCTACGA +
Preference number: 5 (lower is better)
Translates to: LCTHLPEPEQSSTAK*RVLSLHLTKFSALR
Trigger: TCGTAGGGCAGAGAACTTTGTTAGGTGCAGGCTTAGAACCCTGCACTTAGCTGTGCTGCTTTGCTCTGGCTCCGGGAGATGTGTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS CCA 90 bp GTGCGGATCCCTCACAAACACTTCGTCTTCATAATCCTCATGAGGTaGCGGGGAGTCCCGCAGGACAGACTCAGATATTCGGAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: VRIPHKHFVFIILMR*RGVPQDRLRYSEGD
Trigger: ATCTCCCTCCGAATATCTGAGTCTGTCCTGCGGGACTCCCCGCCACCTCATGAGGATTATGAAGACGAAGTGTTTGTGAGGGATCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp CGTGGAGACCACCACTTCACCCAAGGTGGTCGACAGCTCCACTCATaGCGTCCATCAGCAGTAGAGACACTAAATGAGGTTCGAGTCCTA +
Preference number: 5 (lower is better)
Translates to: RGDHHFTQGGRQLHS*RPSAVETLNEVRVL
Trigger: TAGGACTCGAACCTCATTTAGTGTCTCTACTGCTGATGGACGCCATGAGTGGAGCTGTCGACCACCTTGGGTGAAGTGGTGGTCTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS CCA 90 bp CCTGGGTCTGTGCACACATCTATGTTTCGTTGTCTTCTTGAGTTTTaGGTCCCAAGTCTGGGAAGCATCAGAGCCAGGCAGCCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PGSVHTSMFRCLLEF*VPSLGSIRARQPPL
Trigger: CAAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGATGTGTGCACAGACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS TCA 90 bp TGTTCTCTGGACTCTTCTCCAGCACAGTATGCAGCTGCTCCTCTATaGATGGAGACTTCAGGGAGCCTAAAGAGTTTGCCTGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: CSLDSSPAQYAAAPL*METSGSLKSLPEAG
Trigger: GCCGGCCTCAGGCAAACTCTTTAGGCTCCCTGAAGTCTCCATTCATAGAGGAGCAGCTGCATACTGTGCTGGAGAAGAGTCCAGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS TCA 90 bp GCCTCTGAACCCTTGATAGAAGTTTGGAGTCTGGAAGCCAGTGTCTaGCTACCTACCACATGGGCTGCACCAGGCATGTGCCTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: ASEPLIEVWSLEASV*LPTTWAAPGMCLSL
Trigger: AAGGGAAAGGCACATGCCTGGTGCAGCCCATGTGGTAGGTAGTCAGACACTGGCTTCCAGACTCCAAACTTCTATCAAGGGTTCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 90 bp TTGGGCGTGAACGCTCATGAAGGAGGGTGGTGTGGACTCAGCCTCTaGACCCTTGATAGAAGTTTGGAGTCTGGAAGCCAGTGTCTGACT +
Preference number: 5 (lower is better)
Translates to: LGVNAHEGGWCGLSL*TLDRSLESGSQCLT
Trigger: AGTCAGACACTGGCTTCCAGACTCCAAACTTCTATCAAGGGTTCAGAGGCTGAGTCCACACCACCCTCCTTCATGAGCGTTCACGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 90 bp CACTACCAGCCTGAGGGTCTTGTAGGATCCTTTCACCAGGGAAACTaGCTCCTTTCTGGAGCTGCTCAGAGTCACCTCATTGATGTGCAC +
Preference number: 5 (lower is better)
Translates to: HYQPEGLVGSFHQGN*LLSGAAQSHLIDVH
Trigger: GTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAGTTTCCCTGGTGAAAGGATCCTACAAGACCCTCAGGCTGGTAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS GCA 90 bp GACTCTCAGGAATGTTCTGGAGAGATGAGAAGGCTGACTTGGTCTTaGCAAAGTTGCCTGACAGGCTCTGGCCTAGGCCTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: DSQECSGEMRRLTWS*QSCLTGSGLGLLSP
Trigger: TGGAGAGAGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 90 bp CTGACTACCTACCACATGGGCTGCACCAGGCATGTGCCTTTCCCTTaGAATTGTCACTTTAGAAAGTTTGTTGAAGCTGGGGCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LTTYHMGCTRHVPFP*NCHFRKFVEAGAWP
Trigger: GGGCCACGCCCCAGCTTCAACAAACTTTCTAAAGTGACAATTGCAAGGGAAAGGCACATGCCTGGTGCAGCCCATGTGGTAGGTAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 90 bp CAAAGCCAGATTAATCCAGCGCAAAGAGGCTTCTACCCGGATCTCTaGAAGGTAGGGGAGGAATGTCCATCCATGTCTCTGGAGGCGTGT +
Preference number: 5 (lower is better)
Translates to: QSQINPAQRGFYPDL*KVGEECPSMSLEAC
Trigger: ACACGCCTCCAGAGACATGGATGGACATTCCTCCCCTACCTTGCAGAGATCCGGGTAGAAGCCTCTTTGCGCTGGATTAATCTGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466541.1
CDS CCA 90 bp TCTAAGGGCTGGCAGAAGGCAAACCCAGGCCTGCCAGATCCATTCTaGTTCCCATTCTCATCAATGGTAGCCATCTTGTTGCATGCTCCC +
Preference number: 5 (lower is better)
Translates to: SKGWQKANPGLPDPF*FPFSSMVAILLHAP
Trigger: GGGAGCATGCAACAAGATGGCTACCATTGATGAGAATGGGAACCAGAATGGATCTGGCAGGCCTGGGTTTGCCTTCTGCCAGCCCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp GTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCTTAAGGAAGTCTATGCCCAG +
Preference number: 5 (lower is better)
Translates to: VRCSGLTKLEAPVSA*PGSVHTSLKEVYAQ
Trigger: CTGGGCATAGACTTCCTTAAGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481002.5
CDS-3UTR CAA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCGGGGGTGGCACTCCCTaGCCCCGAGGAATATTAGAC +
Preference number: 5 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFGGGTP*PRGILD
Trigger: GTCTAATATTCCTCGGGGCAAGGGAGTGCCACCCCC...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTCTCGCTGCTCGAATTaGGAGACCTTCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSRCSN*ETFSST
Trigger: GGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCGGGCTGGACGTGGCCTaGGGGTGCGGATCCCTCACA +
Preference number: 5 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFGLDVA*GCGSLT
Trigger: TGTGAGGGATCCGCACCCCAAGGCCACGTCCAGCCC...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTGCTCCTGGCCCAGCTaGATCTTGTCATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: HSLGCTTCSKYKATAISSCSWPS*ILSSSF
Trigger: GAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGCA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 90 bp TTCTCAGACTCTCAGGAATGTTCTGGAGAGATGAGAAGGCTGACTTaGTCTTGCCAAAGTTGCCTGACAGGCTCTGGCCTAGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FSDSQECSGEMRRLT*SCQSCLTGSGLGLL
Trigger: GAGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGCTCAGGGTGTCTGCTTaGCCCCCTTCTTCGACCTTA +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLLRVSA*PPSSTL
Trigger: TAAGGTCGAAGAAGGGGGCAAAGCAGACACCCTGAG...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTCTCAAGTGGCCCAGGAAGTGGAGGCCTCCTGATTTTCTCGCAGGACATTGTCTTGGAGGGGACATACTaGGCTGTAGCTTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: FSSGPGSGGLLIFSQDIVLEGTY*AVASGF
Trigger: GAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAA...GACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGTCTGTGACCAGCCCTaGCGTTCCTGCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: APKNKAIALVDYAKETSGVCDQP*RSCQWW
Trigger: CCACCACTGGCAGGAACGCAAGGGCTGGTCACAGAC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAATCTCCCAGGGCGTTGTaGAGCTTGATGTCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQESPRAL*SLMSVS
Trigger: GCTCACGGACATCAAGCTCAACAACGCCCTGGGAGA...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGTCTTCTCCCAGGGCGTaGTTGAGCTTGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLSSPRA*LSLMSV
Trigger: CACGGACATCAAGCTCAACAACGCCCTGGGAGAAGA...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATTCATCTCGAAGAGTGTaGGGAACTGGGAGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDSSRRV*GTGSPL
Trigger: CAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATGA...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CCTGATTTTCTCGCAGGACATTGTCCTTTCCTGGAACCTTGCGGGTGGCTGGAGCAAGCTTTCAGATGTTaGTGGCATGCCAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: PDFLAGHCPFLEPCGWLEQAFRC*WHAKQH
Trigger: ATGCTGCTTGGCATGCCACAAACATCTGAAAGCTTG...CTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS GCA 90 bp AGAGGTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTATGTTTCGTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: RGEVFWADEVRGTSI*MAWVCAHIYVSLSS
Trigger: AGAAGACAACGAAACATAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CCA 90 bp TTACTGTGGGTGCTCTTTCTCTCATTGGAATGTGGGCTGTTGCCTTaGGGAGGTGTGAGATGTCTCTTCAGGGAGGCATCCTCCTCATTT +
Preference number: 5 (lower is better)
Translates to: LLWVLFLSLECGLLP*GGVRCLFREASSSF
Trigger: AAATGAGGAGGATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp TGGGCAACAAGAGCAAAAACTATGTTTCGTTGTCTTCTTGAGTTTTaGGTCCCAAGTCTGGGAAGCATCAGAGCCAGGCAGCCGCCCTCT +
Preference number: 5 (lower is better)
Translates to: WATRAKTMFRCLLEF*VPSLGSIRARQPPS
Trigger: AGAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGTTTTTGCTCTTGTTGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425645.2
CDS CCA 90 bp GTGAGGTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTATGTTTCGTTGTCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: VRCSGLTKLEAPVSA*PGSVHTSMFRCLLE
Trigger: CTCAAGAAGACAACGAAACATAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS-3UTR CAA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATCAGAGGTTGGCCAGGTaGGGCCTTCTGGGTATAGTT +
Preference number: 5 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDQRLAR*GLLGIV
Trigger: AACTATACCCAGAAGGCCCAACCTGGCCAACCTCTG...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGGTCGGCAGCAGAGGTaGGCCAGGTTGGGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFGRQQR*ARLGLL
Trigger: CAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTGCGTGGGCCCACTTaGCTCGAGAAGGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFLRGPT*LEKEVA
Trigger: GGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTCAAACTCATTGGGCTaGCAGAGCTCGCTGATCAGA +
Preference number: 5 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSNSLG*QSSLIR
Trigger: TCTGATCAGCGAGCTCTGCAAGCCCAATGAGTTTGA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTACTATGAAACTCGTAAGCCCAAATCAACAAAGGTGGCCACCAGCCACAGATGTCATCCAGCTTCCGTaGCTCAATGAGGAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: ATMKLVSPNQQRWPPATDVIQLP*LNEERG
Trigger: TCCACGCTCCTCATTGAGCAACGGAAGCTGGATGAC...ATCTGTGGCTGGTGGCCACCTTTGTTGATTTGGGCTTACGAGTTTCATAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGCATGAGAAATGGCTGAGTCAACCAACATGTAGTGACATGCCCAGGAACTTCGCATGCCAAGCAGCATaGCCTGTTACTGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: QHEKWLSQPTCSDMPRNFACQAA*PVTVLW
Trigger: CCACAGCACAGTAACAGGCAATGCTGCTTGGCATGC...GAAGTTCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTTCCTTTCCTGGAACCTaGCGGGTGGCTGGAGTATCT +
Preference number: 5 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPSFPGT*RVAGVS
Trigger: AGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGA...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 90 bp ACACATCTATGTTTCGTTGTCTTCTTGAGTTTTGGGTCCCAAGTCTaGGAAGCATCAGAGCCAGGCAGCCGCCCTTGCTTACCACCATAT +
Preference number: 5 (lower is better)
Translates to: THLCFVVFLSFGSQV*EASEPGSRPCLPPY
Trigger: ATATGGTGGTAAGCAAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGCTTCTACAGCACAAGTaGTCCCATCCTTCAGGACAC +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLLLQHK*SHPSGH
Trigger: GTGTCCTGAAGGATGGGACAACTTGTGCTGTAGAAG...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGGCTGGAATGGTAGCTTaGGTGCCAAGGAGGGCCGAT +
Preference number: 5 (lower is better)
Translates to: APKNKAIALVDYAKETSGAGMVA*VPRRAD
Trigger: ATCGGCCCTCCTTGGCACCAAAGCTACCATTCCAGC...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGGGAGCCTAAAGAGTTaGCCTGAGGCCGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFGSLKS*PEAGRA
Trigger: GGCTCTGCCGGCCTCAGGCAAACTCTTTAGGCTCCC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCTTGTCTTCACCCGCTaGCCAGGCCTGAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYLVFTR*PGLSLR
Trigger: CCTCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAAAGGCTGACTTGGTCTaGCCAAAGTTGCCTGACAGG +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEKADLV*PKLPDR
Trigger: CCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTT...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAGAATCACCAATGGCTTaGCAGCCTGAACCACCCCAA +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEESPMA*QPEPPQ
Trigger: TTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTC...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGAGGGCGTTGTTGAGCTaGATGTCCGTGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: APKNKAIALVDYAKETSGRALLS*MSVSRL
Trigger: GAGCCTGCTCACGGACATCAAGCTCAACAACGCCCT...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS TCA 90 bp TGTGAGATGTCTCTTCAGGGAGGCATCCTCCTCATTTTCAGGCACTaGACAGAAATGGACTTTGGAGGGGACATACTTGGCTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: CEMSLQGGILLIFRH*TEMDFGGDILGCSF
Trigger: GAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGAGGATGCCTCCCTGAAGAGACATCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp CTCTTCAGGGAGGCATCCTCCTCATTTTCAGGCACTGAACAGAAATaGACTTTGGAGGGGACATACTTGGCTGTAGCTTCTGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LFREASSSFSGTEQK*TLEGTYLAVASGFF
Trigger: GAAGAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGAGGATGCCTCCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 90 bp TCCCAGATAGCAACCCTCTGGCCAATTGGATGTCATATTCAGTCGTaGAATAAAAAGCCATTCTGCCCTGCTACTGCTCTTTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SQIATLWPIGCHIQS*NKKPFCPATALSAP
Trigger: GGGAGCAGAAAGAGCAGTAGCAGGGCAGAATGGCTTTTTATTCCACGACTGAATATGACATCCAATTGGCCAGAGGGTTGCTATCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGGCCGCCACAGCCACTaGCCTCCTCTTGAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFGRHSH*PPLERK
Trigger: CTTTCTCTCAAGAGGAGGCAAGTGGCTGTGGCGGCC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAAATGTGGCACTAGGCTaGTGGAAGTCTTCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQENVALG*WKSSVV
Trigger: GACCACTGAAGACTTCCACAAGCCTAGTGCCACATT...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATCCCCAGCCTGCAGTTaGGAGCTCAGGGTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: LNENIPGKPRCCLICINGSPACS*ELRVSA
Trigger: AGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCCTCGAGCAGAAGTATaGTCCATGGAGCCTGAACGC +
Preference number: 5 (lower is better)
Translates to: AIALVDYAKETSGWPVVYPRAEV*SMEPER
Trigger: GCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCAGCCTCCTCCAGAGGTaGGCATTGTGGTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFSLLQR*ALWSSW
Trigger: CCAGGAAGACCACAATGCCAACCTCTGGAGGAGGCT...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATTTGGTCTTGCCAAAGTaGCCTGACAGGCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: AIALVDYAKETSGWPVVYLVLPK*PDRLWP
Trigger: AGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAA...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGGGTGTCCTACTGGCTaGCCTCTGATGGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFGCPTG*PLMVQG
Trigger: ACCCTGGACCATCAGAGGCAAGCCAGTAGGACACCC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTTGGTGGACAATTTCCTaGGCCAAAGCCTCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPWWTIS*AKASVL
Trigger: CAGAACAGAGGCTTTGGCCAAGGAAATTGTCCACCA...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCTGGCCCAGCTTGATCTaGTCATCCAGCTTCCGTTGC +
Preference number: 5 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPWPSLI*SSSFRC
Trigger: GCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCA...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGTCTTCCACCTGGCTaGGCTTGTGAGGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: APKNKAIALVDYAKETSGCLPPG*ACEGSF
Trigger: GAATGAGCCCTCACAAGCCAAGCCAGGTGGAAGACA...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTCCTCCCTTCATTCTTaGGGGTTAAGTGGCCACCGC +
Preference number: 5 (lower is better)
Translates to: APKNKAIALVDYAKETSGSSLHS*GLSGHR
Trigger: GCGGTGGCCACTTAACCCCAAAGAATGAAGGGAGGA...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGAAAGCCAACATTTCCTaGGGTATCCAGAGACCCAGT +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLKANIS*GIQRPS
Trigger: ACTGGGTCTCTGGATACCCAAGGAAATGTTGGCTTT...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 90 bp CTCGGGGAAACAAACCTTCCATCAGGTCCATTGTTGTCTTCAGCCTaGAGTCTGGATCCAAAATGTCTGCTAGAGATTTGTCTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LGETNLPSGPLLSSA*SLDPKCLLEICLGG
Trigger: TCCACCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS-3UTR CAA 90 bp GCTCCAAAGAACAAAGCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGCATGCTGGCATCGGGTaGCTTCTCCCCAGATTTAGT +
Preference number: 5 (lower is better)
Translates to: APKNKAIALVDYAKETSGHAGIG*LLPRFS
Trigger: ACTAAATCTGGGGAGAAGCAACCCGATGCCAGCATG...CCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTTCTTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCTTGGGTCTGTGCTGTaGAAAGAAGCCGAGGCACCG +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYLGSVL*KEAEAP
Trigger: CGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAAG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTACCCTTGATAGAAGTTaGGAGTCTGGAAGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPTLDRS*ESGSQC
Trigger: ACACTGGCTTCCAGACTCCAAACTTCTATCAAGGGT...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGAGACCCAGCAAGTaGGGCGTGAACGCTCATGAA +
Preference number: 5 (lower is better)
Translates to: AIALVDYAKETSGWPVVYKRPSK*GVNAHE
Trigger: TTCATGAGCGTTCACGCCCAACTTGCTGGGTCTCTT...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAACTGTTCTCATGGTCTaGGCAAAGGATACTGTTGGG +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQETVLMV*AKDTVG
Trigger: CCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAATTTTCTCGCAGGACATaGTCCTTTCCTGGAACCTTG +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEFSRRT*SFPGTL
Trigger: CAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAA...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CACAGCCTGGGATGTACTACCTGCTCAAAGTATAAGGCTACTGCCATCTCCAGCTCAGAATTTTCTAACTaGTCCCGAAGAGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: HSLGCTTCSKYKATAISSSEFSN*SRRDRE
Trigger: TTCTCTGTCTCTTCGGGACAAGTTAGAAAATTCTGA...GCTGGAGATGGCAGTAGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATGAACAGAAATGGACTTaGGAGGGGACATACTTGGCT +
Preference number: 5 (lower is better)
Translates to: QKINQEGQEGKRLPPGENEQKWT*EGTYLA
Trigger: AGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTC...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGATCTTCTGCCTTGGTGTaGACTGCACAGGTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRSSALV*TAQVGL
Trigger: CAGGCCCACCTGTGCAGTCAACACCAAGGCAGAAGA...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACAGAAGTACTGGAAGTaGAGACGGTCCTGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRQKYWK*RRSCGA
Trigger: GGCCCCACAGGACCGTCTCAACTTCCAGTACTTCTG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATTCAGCCTCTGAACCCTaGATAGAAGTTTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QKINQEGQEGKRLPPGENSASEP*IEVWSL
Trigger: CAGACTCCAAACTTCTATCAAGGGTTCAGAGGCTGA...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GCCATAGCTTTGGTTGACTATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATCTTCCATCAGGTCCATaGTTGTCTTCAGCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: AIALVDYAKETSGWPVVYLPSGP*LSSAWS
Trigger: ACTCCAGGCTGAAGACAACAATGGACCTGATGGAAG...ATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATGGAGGGTCTCCAGCTaGTGGGTGAGACTTCCAATG +
Preference number: 5 (lower is better)
Translates to: LNENIPGKPRCCLICINGWRVSS*WVRLPM
Trigger: CATTGGAAGTCTCACCCACAAGCTGGAGACCCTCCA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCTACTTGTCAAACTCATaGGGCTTGCAGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPYLSNS*GLQSSL
Trigger: CAGCGAGCTCTGCAAGCCCAATGAGTTTGACAAGTA...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGGAATGCCTGCTCGTGTaGGTAAAAATAAGACAGGAA +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLECLLV*VKIRQE
Trigger: TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTC...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCCATGCAGTGTGGCTGTaGAATGCTGTCACTGGTTCT +
Preference number: 5 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPHAVWL*NAVTGS
Trigger: AGAACCAGTGACAGCATTCAACAGCCACACTGCATG...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GTTAATTTCAGGCTCCCATGTTGGCCTAAGACTGATGACCATGCAGTGTGGCTGTGGCAAAGGATACTGTaGGGAGAAAGAAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: VNFRLPCWPKTDDHAVWLWQRIL*GERRMV
Trigger: AACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCA...CAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS TCA 90 bp CTGCTTCCTTGTCTTCATTCCTCTTGCCTTCACATCCTGAAGAGCTaGCAGTTCTCTGTATGGCCTTCCTCTTTACACTGTTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LLPCLHSSCLHILKS*QFSVWPSSLHCFPS
Trigger: TGAAGGAAAACAGTGTAAAGAGGAAGGCCATACAGAGAACTGTCAGCTCTTCAGGATGTGAAGGCAAGAGGAATGAAGACAAGGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp AGCCTGGAGTCTGGATCCAAAATGTCTGCTAGAGATTTGTCTTGGTaGACAATTTCCTTGGCCAAAGCCTCTGTTCTGATGTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SLESGSKMSARDLSW*TISLAKASVLMSSE
Trigger: TTCAGAAGACATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp TTCAGCCTGGAGTCTGGATCCAAAATGTCTGCTAGAGATTTGTCTTaGTGGACAATTTCCTTGGCCAAAGCCTCTGTTCTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: FSLESGSKMSARDLS*WTISLAKASVLMSS
Trigger: AGAAGACATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 90 bp CACTGCGCCTTGTGGCAAATAGAAACATCCCAGATAGCAACCCTCTaGCCAATTGGATGTCATATTCAGTCGTGGAATAAAAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: HCALWQIETSQIATL*PIGCHIQSWNKKPF
Trigger: GAATGGCTTTTTATTCCACGACTGAATATGACATCCAATTGGCCAGAGGGTTGCTATCTGGGATGTTTCTATTTGCCACAAGGCGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS-3UTR CAA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGAACCAAAGCCACTGTCTaGCCCCAAAAGCACATCCTG +
Preference number: 5 (lower is better)
Translates to: LNENIPGKPRCCLICINGTKATV*PQKHIL
Trigger: CAGGATGTGCTTTTGGGGCAAGACAGTGGCTTTGGT...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATACTTTAGAAAGTTTGTaGAAGCTGGGGCGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYTLESL*KLGRGP
Trigger: GGGGCCACGCCCCAGCTTCAACAAACTTTCTAAAGT...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCCATCAGGTCCATTGTaGTCTTCAGCCTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYPSGPL*SSAWSL
Trigger: CAGACTCCAGGCTGAAGACAACAATGGACCTGATGG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCAGCAGGTTGACCACCTaGTCCAAATCCCCTATGAAC +
Preference number: 5 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFSRLTT*SKSPMN
Trigger: GTTCATAGGGGATTTGGACAAGGTGGTCAACCTGCT...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGTCCAGTGGAAGCGCAGAATGCCTGCTCGTGTTGGTAAAAATAAGACAGGAAATTTCAAAGTCTCACTaGGTGCCTTACCCATTTCAC +
Preference number: 5 (lower is better)
Translates to: QSSGSAECLLVLVKIRQEISKSH*VPYPFH
Trigger: GTGAAATGGGTAAGGCACCAAGTGAGACTTTGAAAT...TTCCTGTCTTATTTTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCCTGGGATGTCCCAGGTaGTTTCTCCTTTATAGCTCC +
Preference number: 5 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFLGCPR*FLLYSS
Trigger: GGAGCTATAAAGGAGAAACAACCTGGGACATCCCAG...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS TCA 90 bp ACATTTCTGAATGTAAATCCTCCTCCAGGAATTCTGGGTTCTCACTaGAGCCCCCAAGTGGTATACATCTCTACTCCGTTCGTCAAAACT +
Preference number: 5 (lower is better)
Translates to: TFLNVNPPPGILGSH*SPQVVYISTPFVKT
Trigger: AGTTTTGACGAACGGAGTAGAGATGTATACCACTTGGGGGCTTCAGTGAGAACCCAGAATTCCTGGAGGAGGATTTACATTCAGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS GCA 90 bp CCTCAAGTTAAATTTAAAATGCCTGAAGCAAACTCAGGCAAGCAGTaGTTCTACAGCACAAGTTGTCCCATCCTTCAGGACACACAATGG +
Preference number: 5 (lower is better)
Translates to: PQVKFKMPEANSGKQ*FYSTSCPILQDTQW
Trigger: CCATTGTGTGTCCTGAAGGATGGGACAACTTGTGCTGTAGAAGCACTGCTTGCCTGAGTTTGCTTCAGGCATTTTAAATTTAACTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 90 bp CAGTGCTTCTACAGCACAAGTTGTCCCATCCTTCAGGACACACAATaGCCAAAAGAGAGGTTTGGAGAAGCAAATTCTTCCATACGTAAA +
Preference number: 5 (lower is better)
Translates to: QCFYSTSCPILQDTQ*PKERFGEANSSIRK
Trigger: TTTACGTATGGAAGAATTTGCTTCTCCAAACCTCTCTTTTGGCCATTGTGTGTCCTGAAGGATGGGACAACTTGTGCTGTAGAAGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGACTCAGAGTCACCTCATaGATGTGCACAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: LNENIPGKPRCCLICINGLRVTS*MCTTSS
Trigger: GGATGAGGTTGTGCACATCAATGAGGTGACTCTGAG...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACTCCAGAGGTTGGCATaGTGGTCTTCCTGGAAATCG +
Preference number: 5 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRLQRLA*WSSWKS
Trigger: CGATTTCCAGGAAGACCACAATGCCAACCTCTGGAG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATGATGAGAAGGCTGACTaGGTCTTGCCAAAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYDEKAD*VLPKLP
Trigger: AGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATC...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATATGTCTGCTAGAGATTaGTCTTGGTGGACAATTTCC +
Preference number: 5 (lower is better)
Translates to: QKINQEGQEGKRLPPGENMSARD*SWWTIS
Trigger: GGAAATTGTCCACCAAGACAAATCTCTAGCAGACAT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp GGACCCAAACTTGTTAATCTTCTAGTCTGGAAACCAGCTGTGCAAAACAAACCCGGCATCTCTTTGATTTaGTTCAGTAGCTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: GPKLVNLLVWKPAVQNKPGISLI*FSSSAL
Trigger: CAAGGCTGAGCTACTGAACAAAATCAAAGAGATGCC...GGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATCCCCTTCACATTCACTaGACCACTTTTTATACCTTG +
Preference number: 5 (lower is better)
Translates to: QKINQEGQEGKRLPPGENPLHIH*TTFYTL
Trigger: CAAGGTATAAAAAGTGGTCAAGTGAATGTGAAGGGG...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATACCTTAGGAGGAAGGTaGTCCGTGGCAGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHTLGGR*SVAVSK
Trigger: CTTGGAGACTGCCACGGACAACCTTCCTCCTAAGGT...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CAGAAGATCAATCAGGAAGGGCAAGAAGGAAAAAGGCTTCCTCCTGGAGAGAATATGAACATCCTATACTaGTCAAACTCATTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QKINQEGQEGKRLPPGENMNILY*SNSLGL
Trigger: CAAGCCCAATGAGTTTGACAAGTATAGGATGTTCAT...ATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTTCTCCTTTATAGCTCCCTCAAAGGACCTCAGTTAAGCCCACACTCCTCACCTACAGTGATCTTTTGGTaGGGTATTTTAGAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: FLLYSSLKGPQLSPHSSPTVIFW*GILEEV
Trigger: AACCTCTTCTAAAATACCCAACCAAAAGATCACTGT...AGGTGAGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATCAGCATGGGCTCCGTTaGAATTTTGTTGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYQHGLR*NFVGFW
Trigger: CCAGAATCCAACAAAATTCAAACGGAGCCCATGCTG...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATAATAACTGTAGACGTTaGCTGGCTGTCTTCCACCTG +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYNNCRR*LAVFHL
Trigger: CAGGTGGAAGACAGCCAGCAAACGTCTACAGTTATT...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGTCACTTTAGAAAGTTaGTTGAAGCTGGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGVTLES*LKLGRG
Trigger: GCCACGCCCCAGCTTCAACAAACTTTCTAAAGTGAC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp AACCTGCTGAAATGCAGTTTCCAGCAGACTTGGTTTTGTCATAGCAATTGGTATTTGTCTTCATTCCTCTaGCCTTCACATCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: NLLKCSFQQTWFCHSNWYLSSFL*PSHPEE
Trigger: CTCTTCAGGATGTGAAGGCAAGAGGAATGAAGACAA...ATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTTCAGCCTTCTTTTCATaGACATCTGCCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFSAFFS*TSACSS
Trigger: AGAGGAACAGGCAGATGTCAATGAAAAGAAGGCTGA...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCTATTTAGCCCAAATCTaGTTCAGGAGAACAGCATGG +
Preference number: 5 (lower is better)
Translates to: TVLMVLAKDTVGRKKNGFYLAQI*FRRTAW
Trigger: CCATGCTGTTCTCCTGAACAAGATTTGGGCTAAATA...GAAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGAAACGAATGTGTGCTTTaGTCTCCTCGAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRNECVL*SPRSHS
Trigger: GGAATGACTTCGAGGAGACAAAAGCACACATTCGTT...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TATGCAAAGGAAACTTCTGGGTGGCCAGTTGTTTATAAGTTAATCAAAAGACATGATAGTGCTTCAGGTTaGCAAAATCAGGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: YAKETSGWPVVYKLIKRHDSASG*QNQGLR
Trigger: CCTCAGCCCCTGATTTTGCAAACCTGAAGCACTATC...ATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp CTGAATGAAAACATCCCTGGGAAACCAAGGTGCTGTCTTATTTGTATCAATGGATCTGCTGGCATCTCTTaGATTTTGTTCAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: LNENIPGKPRCCLICINGSAGIS*ILFSSS
Trigger: TGAGCTACTGAACAAAATCAAAGAGATGCCAGCAGA...TCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTCAAAGGAAAAGATGTTaGGTTTCGACAGCATCTGGT +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFQRKRC*VSTASG
Trigger: ACCAGATGCTGTCGAAACCAAACATCTTTTCCTTTG...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAGGCCAAAAGAGAGGTTaGGAGAAGCAAATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGGQKRG*EKQILP
Trigger: TGGAAGAATTTGCTTCTCCAAACCTCTCTTTTGGCC...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTAACAAAGCCATAGCTTaGGTTGACTATGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFNKAIA*VDYAKE
Trigger: TTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGTT...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS-3UTR CAA 90 bp TACTGTTCTCATGGTCTTGGCAAAGGATACTGTTGGGAGAAAGAAGAATGGTTTGCAGCAGGAAATACTTaGTTCCCGATAATATATTCC +
Preference number: 5 (lower is better)
Translates to: YCSHGLGKGYCWEKEEWFAAGNT*FPIIYS
Trigger: GGAATATATTATCGGGAACAAAGTATTTCCTGCTGC...AAACCATTCTTCTTTCTCCCAACAGTATCCTTTGCCAAGACCATGAGAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS GCA 90 bp AAGAGTGAGCCAACCAATCAATACAATCCAATTTTGCTGTTGAAGTaGAATTCATTGATTCACCCATGTCGAACAAACCTTAAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: KSEPTNQYNPILLLK*NSLIHPCRTNLKEV
Trigger: GACTTCCTTAAGGTTTGTTCGACATGGGTGAATCAATGAATTGCACTTCAACAGCAAAATTGGATTGTATTGATTGGTTGGCTCACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS-3UTR CAA 90 bp TTCTTTCTACTACAAAGTAATAATAGAAAGGGGTACGTGTCCAGCAGCATTCGACTGGAGTATCTGCATTaGGAGTATTGCAAGATTATC +
Preference number: 5 (lower is better)
Translates to: FFLLQSNNRKGYVSSSIRLEYLH*EYCKII
Trigger: GATAATCTTGCAATACTCCAAATGCAGATACTCCAG...TCGAATGCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS GCA 90 bp TTAATCAGAATCACACAGAAGCACGTTCTTAAGCATCTCAACTGTTaGTTAAATGTAGGTGCTTGCATTTATAATCCGACCTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LIRITQKHVLKHLNC*LNVGACIYNPTFSE
Trigger: TTCAGAGAAGGTCGGATTATAAATGCAAGCACCTACATTTAAGCAACAGTTGAGATGCTTAAGAACGTGCTTCTGTGTGATTCTGATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS-3UTR CAA 90 bp ACAATGAAGCCAGCACTACCATGGACAATTAAACTGAAGAGAAGTAAATTTGGAAAGTGCTGCATAAACTaGGAAGACTCTGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TMKPALPWTIKLKRSKFGKCCIN*EDSAVF
Trigger: AAAAACAGCAGAGTCTTCCAAGTTTATGCAGCACTT...TCCAAATTTACTTCTCTTCAGTTTAATTGTCCATGGTAGTGCTGGCTTCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 72 bp GGCGAGCACCTCTCCGGGCGGCAGGGGGCACGGGCCTaGCCAGGTCGCCCTCAGCAGGGGTCACGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: GEHLSGRQGARA*PGRPQQGSRCA
Trigger: GGCACAGCGTGACCCCTGCTGAGGGCGACCTGGCCAGGCCCGTGCCCCCTGCCGCCCGGAGAGGTGCTCGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GCACTCTGGGCGCGCTCACGCAGTGGCCCGGGCTCCTaGAGGCTGCAGCCGGCGGCGGAGGTAGGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: ALWARSRSGPGS*RLQPAAEVGRL
Trigger: CAAGCGGCCTACCTCCGCCGCCGGCTGCAGCCTCCAGGAGCCCGGGCCACTGCGTGAGCGCGCCCAGAGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GGGGCTGCAGGCTGGGCTCCCGCAGTGAGCTCAAGCTaGAGGCCGAGGCGAGGCCGGAGCCTTCGAGCGCCG +
Preference number: 6 (lower is better)
Translates to: GAAGWAPAVSSS*RPRRGRSLRAP
Trigger: CGGCGCTCGAAGGCTCCGGCCTCGCCTCGGCCTCCAGCTTGAGCTCACTGCGGGAGCCCAGCCTGCAGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp CCGGGCCCCCTCCGGCCCAGACTGGATGTGTGCGGGTaGGAGGGGGCAGGCGGCTCTTCGGGACTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: PGPLRPRLDVCG*EGAGGSSGLGS
Trigger: AGACCCAAGTCCCGAAGAGCCGCCTGCCCCCTCGCACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTGGCTTaGGGGAGGTGGCCTAGAGGCACGGTTCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GPRLAHRGGLVA*GRWPRGTVLAQ
Trigger: CTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS GCA 72 bp GCCGTTCCCCGAGGCGGCGGCCACCGGCGAAGGAGCTaGTGCGATCTCGGGGAGCCTGCTGGGTTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: AVPRGGGHRRRS*CDLGEPAGFLQ
Trigger: TTGCAGAAACCCAGCAGGCTCCCCGAGATCGCAGCAGCTCCTTCGCCGGTGGCCGCCGCCTCGGGGAACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp CGAGCCGGGCCTGTCCCGCCACTCGGGCTCCCTCTCTaGCTCGCTGGAGAGCTGGAAGGTGCTCTGGCTACG +
Preference number: 6 (lower is better)
Translates to: RAGPVPPLGLPL*LAGELEGALAT
Trigger: CGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCGGGACAGGCCCGGCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp ACACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTGGTaGCTTGGGGGAGGTGGCCTAGAGGCACGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: TLGQGWPTAGAW*LGGGGLEARFW
Trigger: CCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 72 bp GTGACACTGGGCCAAGGCTGGCCCACCGCGGGGGCTTaGTGGCTTGGGGGAGGTGGCCTAGAGGCACGGTTC +
Preference number: 6 (lower is better)
Translates to: VTLGQGWPTAGA*WLGGGGLEARF
Trigger: GAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS GCA 72 bp CGGGCTCCCTCTCTGGCTCGCTGGAGAGCTGGAAGGTaGTCTGGCTACGGAGGAGCCGAGCGTCCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RAPSLARWRAGR*SGYGGAERPAS
Trigger: AGAGGCCGGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GTTCCCCGAGGCGGCGGCCACCGGCGAAGGAGCTGCTaGGATCTCGGGGAGCCTGCTGGGTTTCTGCAACTG +
Preference number: 6 (lower is better)
Translates to: VPRGGGHRRRSC*DLGEPAGFLQL
Trigger: CAGTTGCAGAAACCCAGCAGGCTCCCCGAGATCGCAGCAGCTCCTTCGCCGGTGGCCGCCGCCTCGGGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp CGCCACTCGGGCTCCCTCTCTGGCTCGCTGGAGAGCTaGAAGGTGCTCTGGCTACGGAGGAGCCGAGCGTCC +
Preference number: 6 (lower is better)
Translates to: RHSGSLSGSLES*KVLWLRRSRAS
Trigger: GGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GCCTGTCCCGCCACTCGGGCTCCCTCTCTGGCTCGCTaGAGAGCTGGAAGGTGCTCTGGCTACGGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: ACPATRAPSLAR*RAGRCSGYGGA
Trigger: GGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCGGGACAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp CCACCGGCGAAGGAGCTGCTGCGATCTCGGGGAGCCTaGTGGGTTTCTGCAACTGTGGCCGGCAGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: PPAKELLRSRGA*WVSATVAGRSV
Trigger: CACGCTCCTGCCGGCCACAGTTGCAGAAACCCAGCAGGCTCCCCGAGATCGCAGCAGCTCCTTCGCCGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TGGTGGCTTGGGGGAGGTGGCCTAGAGGCACGGTTCTaGCCCAGGAAGGATCCGCAGGAGCCAGCCCGAGGA +
Preference number: 6 (lower is better)
Translates to: WWLGGGGLEARF*PRKDPQEPARG
Trigger: TCCTCGGGCTGGCTCCTGCGGATCCTTCCTGGGCCAGAACCGTGCCTCTAGGCCACCTCCCCCAAGCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000485780.1
ENST00000490690.1
CDS CCA 72 bp GTGCGGGTGCGAGGGGGCAGGCGGCTCTTCGGGACTTaGGTCTGTGCTGTTGAAAGAAGCCGAGGCACCGGT +
Preference number: 6 (lower is better)
Translates to: VRVRGGRRLFGT*VCAVERSRGTG
Trigger: ACCGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAAGTCCCGAAGAGCCGCCTGCCCCCTCGCACCCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp CATCCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTaGACCTCACATGGACAGGGCCCGCAAGGACGTCCG +
Preference number: 6 (lower is better)
Translates to: HPGACLRWREMT*TSHGQGPQGRP
Trigger: CGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp TGGTCATTTCTGTCCTGCGTGACACTGGGCCAAGGCTaGCCCACCGCGGGGGCTTGGTGGCTTGGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: WSFLSCVTLGQG*PTAGAWWLGGG
Trigger: ACCTCCCCCAAGCCACCAAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 72 bp GTACCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTaGACCTCACATGGACAGGGCCCGCAAGGACGTCCG +
Preference number: 6 (lower is better)
Translates to: VPGACLRWREMT*TSHGQGPQGRP
Trigger: CGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS TCA 72 bp TGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGATaGCCTGGACCTCACATGGACAGGGCCCGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: CTYLALVCGGGR*PGPHMDRARKD
Trigger: GTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS GCA 72 bp AGACCAGGAGCTGGGCCGCTCACGGTGCCGAAATGCTaGGTAACTGTCACTCCGAGCTGGAGGCAGGGGTGC +
Preference number: 6 (lower is better)
Translates to: RPGAGPLTVPKC*VTVTPSWRQGC
Trigger: GCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GCTAGACCAGGAGCTGGGCCGCTCACGGTGCCGAAATaGTGCGTAACTGTCACTCCGAGCTGGAGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: ARPGAGPLTVPK*CVTVTPSWRQG
Trigger: CCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TTGTCTGCGGTGGCGGGAGATGACCTGGACCTCACATaGACAGGGCCCGCAAGGACGTCCGAGCGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: LSAVAGDDLDLT*TGPARTSERSS
Trigger: GCTGGAACGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp CTACCCCATGCTCTGGGCCATCGCCCTCACAGCCTCTaGGACCGGGAGGCTGGGTCAGGGTGTGACCATTGC +
Preference number: 6 (lower is better)
Translates to: LPHALGHRPHSL*DREAGSGCDHC
Trigger: GCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGGCCCAGAGCATGGGGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp GGGAGGAAGGGACAGTTCGAGGCCAGGACTTGCTGGTaGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: GRKGQFEARTCW*HVPGACLRWRE
Trigger: CTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS TCA 72 bp AAGCACATCCTGGCGCTTGTCTGCGGTGGCGGGAGATaGCCTGGACCTCACATGGACAGGGCCCGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: KHILALVCGGGR*PGPHMDRARKD
Trigger: GTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 72 bp GGGCAAAGTGTGGCTCCAGGGAAGGTACCGGGTAGATaGTGGTCGGCAGCAGAGGTTGGCCAGGTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: GQSVAPGKVPGR*WSAAEVGQVGP
Trigger: AGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp AGGAAGGCTGTCCTCTCTGGCTGCGTGGGCCCACTTTaGTCGAGAAGGAGGTGGCCACTGAGGCAGCGAGAC +
Preference number: 6 (lower is better)
Translates to: RKAVLSGCVGPL*SRRRWPLRQRD
Trigger: GTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGAGGACAGCCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 72 bp GGAGGAAGGGACAGTTCGAGGCCAGGACTTGCTGGTTaGACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: GGRDSSRPGLAG*TYLALVCGGGR
Trigger: TCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 72 bp GCTGCCGGTGGACTTGGCAGGGGAAAGATGACAGGGTaGGTATGCCCCACTGGGCTCCAGGCTCTCCATGCT +
Preference number: 6 (lower is better)
Translates to: AAGGLGRGKMTG*VCPTGLQALHA
Trigger: AGCATGGAGAGCCTGGAGCCCAGTGGGGCATACCCACCCTGTCATCTTTCCCCTGCCAAGTCCACCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000473602.1
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GCTGGGTCAGGGTGTGACCATTGCTTCTGTGCATCATaGCAGGGGTGTAGGGCGGGAGAGGCTGTCGCCCTG +
Preference number: 6 (lower is better)
Translates to: AGSGCDHCFCAS*QGCRAGEAVAL
Trigger: CAGGGCGACAGCCTCTCCCGCCCTACACCCCTGCCATGATGCACAGAAGCAATGGTCACACCCTGACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp TACCCCATGCTCTGGGCCATCGCCCTCACAGCCTCTTaGACCGGGAGGCTGGGTCAGGGTGTGACCATTGCT +
Preference number: 6 (lower is better)
Translates to: YPMLWAIALTAS*TGRLGQGVTIA
Trigger: AGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGGCCCAGAGCATGGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp TCTGGCTGCGTGGGCCCACTTTGCTCGAGAAGGAGGTaGCCACTGAGGCAGCGAGACCCTCTTCCTCGTTCC +
Preference number: 6 (lower is better)
Translates to: SGCVGPLCSRRR*PLRQRDPLPRS
Trigger: GGAACGAGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp CTAGGGAGGAAGGGACAGTTCGAGGCCAGGACTTGCTaGTTGCACGTACCTGGCGCTTGTCTGCGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: LGRKGQFEARTC*LHVPGACLRWR
Trigger: CCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CAA 72 bp CAGGAAGGCTGTCCTCTCTGGCTGCGTGGGCCCACTTaGCTCGAGAAGGAGGTGGCCACTGAGGCAGCGAGA +
Preference number: 6 (lower is better)
Translates to: QEGCPLWLRGPT*LEKEVATEAAR
Trigger: TCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGAGGACAGCCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp CGAGGCCAGGACTTGCTGGTTGCACGTACCTGGCGCTaGTCTGCGGTGGCGGGAGATGACCTGGACCTCACA +
Preference number: 6 (lower is better)
Translates to: RGQDLLVARTWR*SAVAGDDLDLT
Trigger: TGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CAA 90 bp TCACTCCGAGCTGGAGGCAGGGGTGCACCCACCTTAGGAGGAAGGTaGTCCGTGGCAGTCTCCAAGGAACTGGGGCACTGCTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: SLRAGGRGAPTLGGR*SVAVSKELGHCWLQ
Trigger: CTGGAGCCAGCAGTGCCCCAGTTCCTTGGAGACTGCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp GGGACAGTTCGAGGCCAGGACTTGCTGGTTGCACGTACCTGGCGCTaGTCTGCGGTGGCGGGAGATGACCTGGACCTCACATGGACAGGG +
Preference number: 6 (lower is better)
Translates to: GTVRGQDLLVARTWR*SAVAGDDLDLTWTG
Trigger: CCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CAA 90 bp AGGATTCCTCAGGAAGGCTGTCCTCTCTGGCTGCGTGGGCCCACTTaGCTCGAGAAGGAGGTGGCCACTGAGGCAGCGAGACCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RIPQEGCPLWLRGPT*LEKEVATEAARPSS
Trigger: GGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCCAGAGAGGACAGCCTTCCTGAGGAATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp CAGAGCTCGCTGATCAGAGCCTCCACCTCTTCTCCCAGGGCGTTGTaGAGCTTGATGTCCGTGAGCAGGCTCCCCTTCGCCTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: QSSLIRASTSSPRAL*SLMSVSRLPFASWR
Trigger: CCTCCAGGAGGCGAAGGGGAGCCTGCTCACGGACATCAAGCTCAACAACGCCCTGGGAGAAGAGGTGGAGGCTCTGATCAGCGAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 72 bp GCGTGGGCCCACTTTGCTCGAGAAGGAGGTGGCCACTaGGGCAGCGAGACCCTCTTCCTCGTTCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: AWAHFAREGGGH*GSETLFLVPSS
Trigger: AGAAGAGGGAACGAGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 72 bp GGGCAGAGCCAGGGCCCCAGCCTTGGGAATGAAATCTaGGGGCAGGCTCTCCAGCAGACACTTGACCTGCTC +
Preference number: 6 (lower is better)
Translates to: GQSQGPSLGNEI*GQALQQTLDLL
Trigger: GAGCAGGTCAAGTGTCTGCTGGAGAGCCTGCCCTCAGATTTCATTCCCAAGGCTGGGGCCCTGGCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 72 bp CCGCCCACACTCGGTCTCTGGCTCCCTTGCTCTCGCTaGTCGAATTTGGAGACCTTCTCCAGCACCGAGCAG +
Preference number: 6 (lower is better)
Translates to: PPTLGLWLPCSR*SNLETFSSTEQ
Trigger: CTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGAGTGTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp ACGTCGAAAGGAGGTGGCCCCCAAGACACGGGACTGTaGGTCCTTGATGCTGTTCCGGTAGGCGCGGCTGAA +
Preference number: 6 (lower is better)
Translates to: TSKGGGPQDTGL*VLDAVPVGAAE
Trigger: TTCAGCCGCGCCTACCGGAACAGCATCAAGGACGCACAGTCCCGTGTCTTGGGGGCCACCTCCTTTCGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp CTCTTGGACCGGGAGGCTGGGTCAGGGTGTGACCATTaGTTCTGTGCATCATGGCAGGGGTGTAGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: LLDREAGSGCDH*FCASWQGCRAG
Trigger: TCCCGCCCTACACCCCTGCCATGATGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 72 bp AGCGAGACCCTCTTCCTCGTTCCCTCTTCTACCCCATaGTCTGGGCCATCGCCCTCACAGCCTCTTGGACCG +
Preference number: 6 (lower is better)
Translates to: SETLFLVPSSTP*SGPSPSQPLGP
Trigger: CGGTCCAAGAGGCTGTGAGGGCGATGGCCCAGAGCATGGGGTAGAAGAGGGAACGAGGAAGAGGGTCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp CTTGCCCCAAAAGCACATCCTGGCGCTTGTCTGCGGTaGCGGGAGATGACCTGGACCTCACATGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: LAPKAHPGACLR*REMTWTSHGQG
Trigger: GCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCTTTTGGGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp ACTTGCTGGTTGCACGTACCTGGCGCTTGTCTGCGGTaGCGGGAGATGACCTGGACCTCACATGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: TCWLHVPGACLR*REMTWTSHGQG
Trigger: GCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 72 bp ACAGTTCGAGGCCAGGACTTGCTGGTTGCACGTACCTaGCGCTTGTCTGCGGTGGCGGGAGATGACCTGGAC +
Preference number: 6 (lower is better)
Translates to: TVRGQDLLVART*RLSAVAGDDLD
Trigger: GTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CAA 90 bp TCTGCCTGCCTCATCCCTTCGAGGAGGCCACCTCGAGCAGAAGTATaGTCCATGGAGCCTGAACGCTCCCGGCCAGAGATGCCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: SACLIPSRRPPRAEV*SMEPERSRPEMPGC
Trigger: ACACCCTGGCATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGAAGGGATGAGGCAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp TTCCCTCTTCTACCCCATGCTCTGGGCCATCGCCCTCACAGCCTCTaGGACCGGGAGGCTGGGTCAGGGTGTGACCATTGCTTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: FPLLPHALGHRPHSL*DREAGSGCDHCFCA
Trigger: TGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGGCCCAGAGCATGGGGTAGAAGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp AAGCTTCTAGGGAGGAAGGGACAGTTCGAGGCCAGGACTTGCTGGTaGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: KLLGRKGQFEARTCW*HVPGACLRWREMTW
Trigger: CCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCCTAGAAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS TCA 72 bp ACTGCGCCTGTGCTTCAGCCGAAGTTTAACCCCTCCTaGCCACGCTGCTTTCCTGTGCTGGGGGCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: TAPVLQPKFNPS*PRCFPVLGARG
Trigger: ACCTCTGGCCCCCAGCACAGGAAAGCAGCGTGGTCAGGAGGGGTTAAACTTCGGCTGAAGCACAGGCGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000646790.1
CDS TCA 72 bp GGTGGCCTGGGGCAGGGTGTCCTACTGGCTTGCCTCTaGTGGTCCAGGGTTCCAGGACATTCACTAGGAACG +
Preference number: 6 (lower is better)
Translates to: GGLGQGVLLACL*WSRVPGHSLGT
Trigger: CGTTCCTAGTGAATGTCCTGGAACCCTGGACCATCAGAGGCAAGCCAGTAGGACACCCTGCCCCAGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS GCA 72 bp TGCTGCGTAACTGTCACTCCGAGCTGGAGGCAGGGGTaGACCCACCTTAGGAGGAAGGTTGTCCGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: CCVTVTPSWRQG*THLRRKVVRGS
Trigger: ACTGCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp CTTCGAGGAGGCCACCTCGAGCAGAAGTATTGTCCATaGAGCCTGAACGCTCCCGGCCAGAGATGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LRGGHLEQKYCP*SLNAPGQRCQG
Trigger: ACCCTGGCATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp CAAAGTGTGGCTCCAGGGAAGGTACCGGGTAGATGCTaGTCGGCAGCAGAGGTTGGCCAGGTTGGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: QSVAPGKVPGRC*SAAEVGQVGPS
Trigger: AGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TCGGTCTCTGGCTCCCTTGCTCTCGCTGCTCGAATTTaGAGACCTTCTCCAGCACCGAGCAGTGGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SVSGSLALAARI*RPSPAPSSGAS
Trigger: GGAAGCCCCACTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp CCAGGTGGGACGTGGAGACCACCACTTCACCCAAGGTaGTCGACAGCTCCACTCATGGCGTCCATCAGCAGT +
Preference number: 6 (lower is better)
Translates to: PGGTWRPPLHPR*STAPLMASISS
Trigger: ACTGCTGATGGACGCCATGAGTGGAGCTGTCGACCACCTTGGGTGAAGTGGTGGTCTCCACGTCCCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS CAA 72 bp CTCGGTCTCTGGCTCCCTTGCTCTCGCTGCTCGAATTaGGAGACCTTCTCCAGCACCGAGCAGTGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: LGLWLPCSRCSN*ETFSSTEQWGF
Trigger: GAAGCCCCACTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp CTGATCAGAGCCTCCACCTCTTCTCCCAGGGCGTTGTaGAGCTTGATGTCCGTGAGCAGGCTCCCCTTCGCC +
Preference number: 6 (lower is better)
Translates to: LIRASTSSPRAL*SLMSVSRLPFA
Trigger: GGCGAAGGGGAGCCTGCTCACGGACATCAAGCTCAACAACGCCCTGGGAGAAGAGGTGGAGGCTCTGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp GCTTCTAGGGAGGAAGGGACAGTTCGAGGCCAGGACTaGCTGGTTGCACGTACCTGGCGCTTGTCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: ASREEGTVRGQD*LVARTWRLSAV
Trigger: CACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCCTAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CAA 90 bp TTGAGTCTGGATGGGTGCTGGCTGCCCACCAAGAGACCCAGCAAGTaGGGCGTGAACGCTCATGAAGGAGGGTGGTGTGGACTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: LSLDGCWLPTKRPSK*GVNAHEGGWCGLSL
Trigger: GAGGCTGAGTCCACACCACCCTCCTTCATGAGCGTTCACGCCCAACTTGCTGGGTCTCTTGGTGGGCAGCCAGCACCCATCCAGACTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp CCCACTAAAGCTTCTAGGGAGGAAGGGACAGTTCGAGGCCAGGACTaGCTGGTTGCACGTACCTGGCGCTTGTCTGCGGTGGCGGGAGAT +
Preference number: 6 (lower is better)
Translates to: PTKASREEGTVRGQD*LVARTWRLSAVAGD
Trigger: ATCTCCCGCCACCGCAGACAAGCGCCAGGTACGTGCAACCAGCAAGTCCTGGCCTCGAACTGTCCCTTCCTCCCTAGAAGCTTTAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS TCA 72 bp TGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGCGTaGCACTGGGCCAAGGCTGGCCCACCGCGGGGGCTT +
Preference number: 6 (lower is better)
Translates to: CPQLSVGHFCPA*HWAKAGPPRGL
Trigger: AAGCCCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS TCA 72 bp TGGGCTGCCCTGATTAGCCAAACACAAAAGGCAGTTTaGATGACTGCCTCCTCCCGGCCAATCGCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: WAALISQTQKAV*MTASSRPIAGR
Trigger: GCGGCCGGCGATTGGCCGGGAGGAGGCAGTCATTCAAACTGCCTTTTGTGTTTGGCTAATCAGGGCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490690.1
CDS TCA 72 bp CTACATGTGCCTCCAGTTGGACGGCCTGAATCGCCTTaGACTTGCCCAGCTCAGCGCAAGTGGGAGGGACTC +
Preference number: 6 (lower is better)
Translates to: LHVPPVGRPESP*TCPAQRKWEGL
Trigger: GAGTCCCTCCCACTTGCGCTGAGCTGGGCAAGTTCAAGGCGATTCAGGCCGTCCAACTGGAGGCACATGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS TCA 72 bp GGTTGCTTCTCCCCAGATTTAGTTGTGTGCCACGAGTaGGGTCGGCCTGCAGGCTCACTGCGCCTTGTGGCA +
Preference number: 6 (lower is better)
Translates to: GCFSPDLVVCHE*GRPAGSLRLVA
Trigger: TGCCACAAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS GCA 72 bp CCATTGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTaGGTGACACTGGGCCAAGGCTGGCCCACCGCGGGG +
Preference number: 6 (lower is better)
Translates to: PLSSVICWSFLS*VTLGQGWPTAG
Trigger: CCCCGCGGTGGGCCAGCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 72 bp ACGGTGCCGAAATGCTGCGTAACTGTCACTCCGAGCTaGAGGCAGGGGTGCACCCACCTTAGGAGGAAGGTT +
Preference number: 6 (lower is better)
Translates to: TVPKCCVTVTPS*RQGCTHLRRKV
Trigger: AACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TCCAGCCTCCTCCAGAGGTTGGCATTGTGGTCTTCCTaGAAATCGCCCTCCCAGGGCTCTGAGAGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SSLLQRLALWSS*KSPSQGSESLE
Trigger: TTCCAGGCTCTCAGAGCCCTGGGAGGGCGATTTCCAGGAAGACCACAATGCCAACCTCTGGAGGAGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TGGATCATGGCTGAGGCTTTGAGTCTGGATGGGTGCTaGCTGCCCACCAAGAGACCCAGCAAGTTGGGCGTG +
Preference number: 6 (lower is better)
Translates to: WIMAEALSLDGC*LPTKRPSKLGV
Trigger: CACGCCCAACTTGCTGGGTCTCTTGGTGGGCAGCCAGCACCCATCCAGACTCAAAGCCTCAGCCATGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp GCTGACGAAGTTAGAGGCACCAGTATCTGCATGGCCTaGGTCTGTGCACACATCTCATCGCCGCTCGCCTCG +
Preference number: 6 (lower is better)
Translates to: ADEVRGTSICMA*VCAHISSPLAS
Trigger: CGAGGCGAGCGGCGATGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CAA 72 bp CTCATCCCTTCGAGGAGGCCACCTCGAGCAGAAGTATaGTCCATGGAGCCTGAACGCTCCCGGCCAGAGATG +
Preference number: 6 (lower is better)
Translates to: LIPSRRPPRAEV*SMEPERSRPEM
Trigger: CATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGAAGGGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp TGGCTCCAGGGAAGGTACCGGGTAGATGCTGGTCGGCAGCAGAGGTaGGCCAGGTTGGGCCTTCTGGGTATAGTTATGCTTGGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: WLQGRYRVDAGRQQR*ARLGLLGIVMLGLH
Trigger: GTGAAGCCCAAGCATAACTATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp GAGGGCAGGCTCTCCAGCAGACACTTGACCTGCTCCTGGCCCAGCTaGATCTTGTCATCCAGCTTCCGTTGCTCAATGAGGAGCGTGGAC +
Preference number: 6 (lower is better)
Translates to: EGRLSSRHLTCSWPS*ILSSSFRCSMRSVD
Trigger: GTCCACGCTCCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCTGGAGAGCCTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 72 bp CAATGGCTTTGCAGCCTGAACCACCCCAACGAGGGGTaGGATGGTGGAAGAGCGGCAGCATCTCTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: QWLCSLNHPNEG*DGGRAAASLLG
Trigger: GCCAAGAAGAGATGCTGCCGCTCTTCCACCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS TCA 72 bp GAGGTTCGAGTCCTAGGAGGCATCCTCTGGGGATGTTaGGGGTCAAACTCGAGGCTAACAGTGACCGGTGGG +
Preference number: 6 (lower is better)
Translates to: EVRVLGGILWGC*GSNSRLTVTGG
Trigger: CCCACCGGTCACTGTTAGCCTCGAGTTTGACCCTCAACATCCCCAGAGGATGCCTCCTAGGACTCGAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS GCA 72 bp CCCAGATTTAGTTGTGTGCCACGAGTGAGGTCGGCCTaGAGGCTCACTGCGCCTGTGCTTCAGCCGAAGTTT +
Preference number: 6 (lower is better)
Translates to: PRFSCVPRVRSA*RLTAPVLQPKF
Trigger: AAACTTCGGCTGAAGCACAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GGTAACCCTCCTGGGTTCCCCGGCCTAGCTCCAGGCTaGTGTGTCTTCTCAGACTCTCAGGAATGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GNPPGFPGLAPG*CVFSDSQECSG
Trigger: TCCAGAACATTCCTGAGAGTCTGAGAAGACACAGCAGCCTGGAGCTAGGCCGGGGAACCCAGGAGGGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTCCCGGAGC +
Preference number: 6 (lower is better)
Translates to: VFWADEVRGTSI*MAWVCAHISRS
Trigger: GCTCCGGGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS CCA 72 bp TTATGGCCAAAACCAGAGCCGCCCACACTCGGTCTCTaGCTCCCTTGCTCTCGCTGCTCGAATTTGGAGACC +
Preference number: 6 (lower is better)
Translates to: LWPKPEPPTLGL*LPCSRCSNLET
Trigger: GGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGAGTGTGGGCGGCTCTGGTTTTGGCCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCCCGGAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SGLTKLEAPVSA*PGSVHTSPGAR
Trigger: TCTGGCTCCGGGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS CCA 72 bp TCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCATCGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: SGLTKLEAPVSA*PGSVHTSHRRS
Trigger: CGAGCGGCGATGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS CCA 72 bp AGATACAACCTTTCTGTGGCCATCGTGCTGCCCAGGTaGGACGTGGAGACCACCACTTCACCCAAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RYNLSVAIVLPR*DVETTTSPKVV
Trigger: GACCACCTTGGGTGAAGTGGTGGTCTCCACGTCCCACCTGGGCAGCACGATGGCCACAGAAAGGTTGTATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS CCA 72 bp TGTGTTGTGCTGGGTGGGGTAGATACAACCTTTCTGTaGCCATCGTGCTGCCCAGGTGGGACGTGGAGACCA +
Preference number: 6 (lower is better)
Translates to: CVVLGGVDTTFL*PSCCPGGTWRP
Trigger: TGGTCTCCACGTCCCACCTGGGCAGCACGATGGCCACAGAAAGGTTGTATCTACCCCACCCAGCACAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS TCA 72 bp AGCTGTAAGCCGAGTCTCTCTTGTTATGGAAGTGGCTaGGCTGGTCAATGCTGCCGGTGGACTTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SCKPSLSCYGSG*AGQCCRWTWQG
Trigger: CCCCTGCCAAGTCCACCGGCAGCATTGACCAGCTCAGCCACTTCCATAACAAGAGAGACTCGGCTTACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000473602.1
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GTCACCTCATTGATGTGCACAACCTCATCCCCAGCCTaGAGTTTGGAGCTCAGGGTGTCTGCTTTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: VTSLMCTTSSPA*SLELRVSALPP
Trigger: AGGGGGCAAAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS GCA 72 bp CCGGGTGTCATAGACTGTCTTGACATAGCGAATATCTaGCTGCCTCATCCCTTCGAGGAGGCCACCTCGAGC +
Preference number: 6 (lower is better)
Translates to: PGVIDCLDIANI*LPHPFEEATSS
Trigger: GCTCGAGGTGGCCTCCTCGAAGGGATGAGGCAGGCAGATATTCGCTATGTCAAGACAGTCTATGACACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp CACTCTCCTTGGCCAGTGCAGGGTAGAGCATACCGTTaGTACTCACAGAAGGCTGAGGCACCTGGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: HSPWPVQGRAYR*YSQKAEAPGQS
Trigger: ACTTTGCCCAGGTGCCTCAGCCTTCTGTGAGTAGCAACGGTATGCTCTACCCTGCACTGGCCAAGGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTCATCGCCG +
Preference number: 6 (lower is better)
Translates to: VFWADEVRGTSI*MAWVCAHISSP
Trigger: CGGCGATGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486758.5
CDS GCA 72 bp CAAGTCTGGGAAGCATCAGAGCCAGGCAGCCGCCCTTaGTTACCACCATATCCACAACAGGCCAGCAATGAG +
Preference number: 6 (lower is better)
Translates to: QVWEASEPGSRP*LPPYPQQASNE
Trigger: CTCATTGCTGGCCTGTTGTGGATATGGTGGTAAGCAAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CCA 72 bp GCTGACGAAGTTAGAGGCACCAGTATCTGCATGGCCTaGGTCTGTGCACACATCTCTGCGCACTACCAGCCT +
Preference number: 6 (lower is better)
Translates to: ADEVRGTSICMA*VCAHISAHYQP
Trigger: AGGCTGGTAGTGCGCAGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000469923.5
CDS CCA 72 bp TGCTTTCCTGTGCTGGGGGCCAGAGGTGAGGTGTTCTaGGCTGACGAAGTTAGAGGCACCAGTATCTGCATG +
Preference number: 6 (lower is better)
Translates to: CFPVLGARGEVF*ADEVRGTSICM
Trigger: CATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCTGGCCCCCAGCACAGGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GTGTCTGACACCACAGACGCACCTCCGCTGGGAACCTaGGCTGCCCTGATTAGCCAAACACAAAAGGCAGTT +
Preference number: 6 (lower is better)
Translates to: VSDTTDAPPLGT*AALISQTQKAV
Trigger: AACTGCCTTTTGTGTTTGGCTAATCAGGGCAGCCCAGGTTCCCAGCGGAGGTGCGTCTGTGGTGTCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425645.2
ENST00000490690.1
CDS CCA 72 bp GCTGACGAAGTTAGAGGCACCAGTATCTGCATGGCCTaGGTCTGTGCACACATCTCCCGGAGCCAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: ADEVRGTSICMA*VCAHISRSQSK
Trigger: TTTGCTCTGGCTCCGGGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS CAA 72 bp GGAAGGTACCGGGTAGATGCTGGTCGGCAGCAGAGGTaGGCCAGGTTGGGCCTTCTGGGTATAGTTATGCTT +
Preference number: 6 (lower is better)
Translates to: GRYRVDAGRQQR*ARLGLLGIVML
Trigger: AAGCATAACTATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp ACCAGGGAAACTGCCTCCTTTCTGGAGCTGCTCAGAGTCACCTCATaGATGTGCACAACCTCATCCCCAGCCTGCAGTTTGGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: TRETASFLELLRVTS*MCTTSSPACSLELR
Trigger: CCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAGTTTCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS CAA 90 bp AGGGCCGATCATACCCTGAGATATCTGCATCATGCTGGCATCGGGTaGCTTCTCCCCAGATTTAGTTGTGTGCCACGAGTGAGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: RADHTLRYLHHAGIG*LLPRFSCVPRVRSA
Trigger: GGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAGCATGATGCAGATATCTCAGGGTATGATCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000644244.1
ENST00000646790.1
CDS CAA 90 bp AGGGTTCCAGGACATTCACTAGGAACGGAGGAATCACCAATGGCTTaGCAGCCTGAACCACCCCAACGAGGGGTGAGATGGTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: RVPGHSLGTEESPMA*QPEPPQRGVRWWKS
Trigger: GCTCTTCCACCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTCCTCCGTTCCTAGTGAATGTCCTGGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS TCA 72 bp CTGCCTCCTTTCTGGAGCTGCTCAGAGTCACCTCATTaGTGTGCACAACCTCATCCCCAGCCTGCAGTTTGG +
Preference number: 6 (lower is better)
Translates to: LPPFWSCSESPH*CAQPHPQPAVW
Trigger: CCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS TCA 72 bp CTGGGTCTGTGCACACATCTCTGCGCACTACCAGCCTaGGGGTCTTGTAGGATCCTTTCACCAGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: LGLCTHLCALPA*GSCRILSPGKL
Trigger: CAGTTTCCCTGGTGAAAGGATCCTACAAGACCCTCAGGCTGGTAGTGCGCAGAGATGTGTGCACAGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000469923.5
CDS TCA 72 bp ACTAGGAACGGAGGAATCACCAATGGCTTTGCAGCCTaGACCACCCCAACGAGGGGTGAGATGGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: TRNGGITNGFAA*TTPTRGEMVEE
Trigger: CTCTTCCACCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTCCTCCGTTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS TCA 72 bp CTCACAAGTACTACATGTGCCTCCAGTTGGACGGCCTaGATCGCCTTGAACTTGCCCAGCTCAGCGCAAGTG +
Preference number: 6 (lower is better)
Translates to: LTSTTCASSWTA*IALNLPSSAQV
Trigger: CACTTGCGCTGAGCTGGGCAAGTTCAAGGCGATTCAGGCCGTCCAACTGGAGGCACATGTAGTACTTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS CCA 72 bp TTCTCCACTGGGGACAGCAAGTCATGTTCTAAGGGCTaGCAGAAGGCAAACCCAGGCCTGCCAGATCCATTC +
Preference number: 6 (lower is better)
Translates to: FSTGDSKSCSKG*QKANPGLPDPF
Trigger: GAATGGATCTGGCAGGCCTGGGTTTGCCTTCTGCCAGCCCTTAGAACATGACTTGCTGTCCCCAGTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp GGACATTCACTAGGAACGGAGGAATCACCAATGGCTTaGCAGCCTGAACCACCCCAACGAGGGGTGAGATGG +
Preference number: 6 (lower is better)
Translates to: GHSLGTEESPMA*QPEPPQRGVRW
Trigger: CCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTCCTCCGTTCCTAGTGAATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000646790.1
CDS CAA 72 bp AGCAGACACTTGACCTGCTCCTGGCCCAGCTTGATCTaGTCATCCAGCTTCCGTTGCTCAATGAGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: SRHLTCSWPSLI*SSSFRCSMRSV
Trigger: CACGCTCCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp CTCTCCAGCAGACACTTGACCTGCTCCTGGCCCAGCTaGATCTTGTCATCCAGCTTCCGTTGCTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: LSSRHLTCSWPS*ILSSSFRCSMR
Trigger: CCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp GGAATGAAATCTGAGGGCAGGCTCTCCAGCAGACACTaGACCTGCTCCTGGCCCAGCTTGATCTTGTCATCC +
Preference number: 6 (lower is better)
Translates to: GMKSEGRLSSRH*TCSWPSLILSS
Trigger: GGATGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCTGGAGAGCCTGCCCTCAGATTTCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp AGGCTCTCCAGCAGACACTTGACCTGCTCCTGGCCCAGCTTGATCTaGTCATCCAGCTTCCGTTGCTCAATGAGGAGCGTGGACTTCATT +
Preference number: 6 (lower is better)
Translates to: RLSSRHLTCSWPSLI*SSSFRCSMRSVDFI
Trigger: AATGAAGTCCACGCTCCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCTGGAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 72 bp CTGCTGAGACTCCCCTCCGGGTGTCATAGACTGTCTTaGCATAGCGAATATCTGCCTGCCTCATCCCTTCGA +
Preference number: 6 (lower is better)
Translates to: LLRLPSGCHRLS*HSEYLPASSLR
Trigger: TCGAAGGGATGAGGCAGGCAGATATTCGCTATGTCAAGACAGTCTATGACACCCGGAGGGGAGTCTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS TCA 72 bp CCCTTGATAGAAGTTTGGAGTCTGGAAGCCAGTGTCTaGCTACCTACCACATGGGCTGCACCAGGCATGTGC +
Preference number: 6 (lower is better)
Translates to: PLIEVWSLEASV*LPTTWAAPGMC
Trigger: GCACATGCCTGGTGCAGCCCATGTGGTAGGTAGTCAGACACTGGCTTCCAGACTCCAAACTTCTATCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 72 bp CCACTCATGGCGTCCATCAGCAGTAGAGACACTAAATaGGGTTCGAGTCCTAGGAGGCATCCTCTGGGGATG +
Preference number: 6 (lower is better)
Translates to: PLMASISSRDTK*GSSPRRHPLGM
Trigger: CATCCCCAGAGGATGCCTCCTAGGACTCGAACCTCATTTAGTGTCTCTACTGCTGATGGACGCCATGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485780.1
ENST00000497440.5
CDS GCA 72 bp TCCTTTCTGGAGCTGCTCAGAGTCACCTCATTGATGTaGACAACCTCATCCCCAGCCTGCAGTTTGGAGCTC +
Preference number: 6 (lower is better)
Translates to: SFLELLRVTSLM*TTSSPACSLEL
Trigger: GAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000469923.5
ENST00000497440.5
CDS CCA 72 bp TTGGGCCTTCTGGGTATAGTTATGCTTGGGCTTCACTaGGGGGCTGTTCTCTGGACTCTTCTCCAGCACAGT +
Preference number: 6 (lower is better)
Translates to: LGLLGIVMLGLH*GAVLWTLLQHS
Trigger: ACTGTGCTGGAGAAGAGTCCAGAGAACAGCCCCCCAGTGAAGCCCAAGCATAACTATACCCAGAAGGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GTGCTCTTTCTCTCATTGGAATGTGGGCTGTTGCCTTaGGGAGGTGTGAGATGTCTCTTCAGGGAGGCATCC +
Preference number: 6 (lower is better)
Translates to: VLFLSLECGLLP*GGVRCLFREAS
Trigger: GGATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TATGCCCAGGCAGGTCCATTGTCCTCAGTTATCTGTTaGTCATTTCTGTCCTGCGTGACACTGGGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: YAQAGPLSSVIC*SFLSCVTLGQG
Trigger: GCCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CCA 72 bp TGTTTCGTTGTCTTCTTGAGTTTTGGGTCCCAAGTCTaGGAAGCATCAGAGCCAGGCAGCCGCCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: CFVVFLSFGSQV*EASEPGSRPLL
Trigger: CAAGAGAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425645.2
CDS CAA 72 bp GGTGCTCTTTCTCTCATTGGAATGTGGGCTGTTGCCTaGGGGAGGTGTGAGATGTCTCTTCAGGGAGGCATC +
Preference number: 6 (lower is better)
Translates to: GALSLIGMWAVA*GRCEMSLQGGI
Trigger: GATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp GGAATGTTCTGGAGAGATGAGAAGGCTGACTTGGTCTaGCCAAAGTTGCCTGACAGGCTCTGGCCTAGGCCT +
Preference number: 6 (lower is better)
Translates to: GMFWRDEKADLV*PKLPDRLWPRP
Trigger: AGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp CTATGCCCAGGCAGGTCCATTGTCCTCAGTTATCTGTaGGTCATTTCTGTCCTGCGTGACACTGGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: LCPGRSIVLSYL*VISVLRDTGPR
Trigger: CCTTGGCCCAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425645.2
ENST00000481002.5
ENST00000484236.1
ENST00000485780.1
ENST00000490690.1
CDS CAA 90 bp AGACTCTCAGGAATGTTCTGGAGAGATGAGAAGGCTGACTTGGTCTaGCCAAAGTTGCCTGACAGGCTCTGGCCTAGGCCTTCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RLSGMFWRDEKADLV*PKLPDRLWPRPSLS
Trigger: GGAGAGAGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp ACCGGTGGGGAGAGGCTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGCGTGACACTG +
Preference number: 6 (lower is better)
Translates to: TGGERLKEVYAQAGP*SSVICWSFLSCVTL
Trigger: CAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGCCTCTCCCCACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485780.1
CDS TCA 72 bp AACGCTCATGAAGGAGGGTGGTGTGGACTCAGCCTCTaGACCCTTGATAGAAGTTTGGAGTCTGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: NAHEGGWCGLSL*TLDRSLESGSQ
Trigger: CTGGCTTCCAGACTCCAAACTTCTATCAAGGGTTCAGAGGCTGAGTCCACACCACCCTCCTTCATGAGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 72 bp GAATGTTCTGGAGAGATGAGAAGGCTGACTTGGTCTTaGCAAAGTTGCCTGACAGGCTCTGGCCTAGGCCTT +
Preference number: 6 (lower is better)
Translates to: ECSGEMRRLTWS*QSCLTGSGLGL
Trigger: AAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GTGCAGGGTTCTAAGCCTGCACCTAACAAAGTTCTCTaGCCTACGAAGGCGAATCCACTACTGAGTGTCGTG +
Preference number: 6 (lower is better)
Translates to: VQGSKPAPNKVL*PTKANPLLSVV
Trigger: CACGACACTCAGTAGTGGATTCGCCTTCGTAGGGCAGAGAACTTTGTTAGGTGCAGGCTTAGAACCCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS GCA 72 bp GTGTTCTGGGCTGACGAAGTTAGAGGCACCAGTATCTaGATGGCCTGGGTCTGTGCACACATCTATGTTTCG +
Preference number: 6 (lower is better)
Translates to: VFWADEVRGTSI*MAWVCAHIYVS
Trigger: CGAAACATAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CCA 72 bp CCTCACAAACACTTCGTCTTCATAATCCTCATGAGGTaGCGGGGAGTCCCGCAGGACAGACTCAGATATTCG +
Preference number: 6 (lower is better)
Translates to: PHKHFVFIILMR*RGVPQDRLRYS
Trigger: CGAATATCTGAGTCTGTCCTGCGGGACTCCCCGCCACCTCATGAGGATTATGAAGACGAAGTGTTTGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp TCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTCTTAAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: SGLTKLEAPVSA*PGSVHTSLKEV
Trigger: GACTTCCTTAAGAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481002.5
CDS CCA 72 bp TGTTTCGTTGTCTTCTTGAGTTTTGGGTCCCAAGTCTaGGAAGCATCAGAGCCAGGCAGCCGCCCTTGCTTA +
Preference number: 6 (lower is better)
Translates to: CFVVFLSFGSQV*EASEPGSRPCL
Trigger: TAAGCAAGGGCGGCTGCCTGGCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CAA 72 bp TCCCCAGCCTGCAGTTTGGAGCTCAGGGTGTCTGCTTaGCCCCCTTCTTCGACCTTAGAGATGATTAATGGT +
Preference number: 6 (lower is better)
Translates to: SPACSLELRVSA*PPSSTLEMING
Trigger: ACCATTAATCATCTCTAAGGTCGAAGAAGGGGGCAAAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000497440.5
CDS CAA 72 bp CTCTCAGGAATGTTCTGGAGAGATGAGAAGGCTGACTaGGTCTTGCCAAAGTTGCCTGACAGGCTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: LSGMFWRDEKAD*VLPKLPDRLWP
Trigger: AGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp GTTACTGTGGGTGCTCTTTCTCTCATTGGAATGTGGGCTGTTGCCTaGGGGAGGTGTGAGATGTCTCTTCAGGGAGGCATCCTCCTCATT +
Preference number: 6 (lower is better)
Translates to: VTVGALSLIGMWAVA*GRCEMSLQGGILLI
Trigger: AATGAGGAGGATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp CTTCTCAGACTCTCAGGAATGTTCTGGAGAGATGAGAAGGCTGACTaGGTCTTGCCAAAGTTGCCTGACAGGCTCTGGCCTAGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LLRLSGMFWRDEKAD*VLPKLPDRLWPRPS
Trigger: AGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTCTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp ACATTCTCAACACGGGCTAGACGCCCCGAGAGGGAGAGCAGCAGGTaGACCACCTTGTCCAAATCCCCTATGAACATCCTATACTTGTCA +
Preference number: 6 (lower is better)
Translates to: TFSTRARRPERESSR*TTLSKSPMNILYLS
Trigger: TGACAAGTATAGGATGTTCATAGGGGATTTGGACAAGGTGGTCAACCTGCTGCTCTCCCTCTCGGGGCGTCTAGCCCGTGTTGAGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS GCA 72 bp ATTAATCCAGCGCAAAGAGGCTTCTACCCGGATCTCTaGAAGGTAGGGGAGGAATGTCCATCCATGTCTCTG +
Preference number: 6 (lower is better)
Translates to: INPAQRGFYPDL*KVGEECPSMSL
Trigger: CAGAGACATGGATGGACATTCCTCCCCTACCTTGCAGAGATCCGGGTAGAAGCCTCTTTGCGCTGGATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466541.1
CDS CCA 72 bp TGGCAGAAGGCAAACCCAGGCCTGCCAGATCCATTCTaGTTCCCATTCTCATCAATGGTAGCCATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: WQKANPGLPDPF*FPFSSMVAILL
Trigger: CAACAAGATGGCTACCATTGATGAGAATGGGAACCAGAATGGATCTGGCAGGCCTGGGTTTGCCTTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TCTCAGGAATGTTCTGGAGAGATGAGAAGGCTGACTTaGTCTTGCCAAAGTTGCCTGACAGGCTCTGGCCTA +
Preference number: 6 (lower is better)
Translates to: SQECSGEMRRLT*SCQSCLTGSGL
Trigger: TAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp TCTGGGCTGACGAAGTTAGAGGCACCAGTATCTGCATaGCCTGGGTCTGTGCACACATCTATGTTTCGTTGT +
Preference number: 6 (lower is better)
Translates to: SGLTKLEAPVSA*PGSVHTSMFRC
Trigger: ACAACGAAACATAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CAA 72 bp CATACCCTGAGATATCTGCATCATGCTGGCATCGGGTaGCTTCTCCCCAGATTTAGTTGTGTGCCACGAGTG +
Preference number: 6 (lower is better)
Translates to: HTLRYLHHAGIG*LLPRFSCVPRV
Trigger: CACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAGCATGATGCAGATATCTCAGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296043.7
ENST00000469923.5
ENST00000473602.1
ENST00000481002.5
ENST00000486758.5
ENST00000644244.1
ENST00000646790.1
CDS CAA 72 bp ATAACATGGATCCTTCACAAGACCAAAGCCACTGTCTaGCCCCAAAAGCACATCCTGGCGCTTGTCTGCGGT +
Preference number: 6 (lower is better)
Translates to: ITWILHKTKATV*PQKHILALVCG
Trigger: ACCGCAGACAAGCGCCAGGATGTGCTTTTGGGGCAAGACAGTGGCTTTGGTCTTGTGAAGGATCCATGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp GGGACCCTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: GTLKEVYAQAGP*SSVICWSFLSC
Trigger: GCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490690.1
CDS CAA 90 bp CGTTGCCTAGGGGTTCAGCTGACTCAGAGAAACGAATGTGTGCTTTaGTCTCCTCGAAGTCATTCCCAGAAGTACTGGAAGTTGAGACGG +
Preference number: 6 (lower is better)
Translates to: RCLGVQLTQRNECVL*SPRSHSQKYWKLRR
Trigger: CCGTCTCAACTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAAAAGCACACATTCGTTTCTCTGAGTCAGCTGAACCCCTAGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp CTGCAAGGTAGGGGAGGAATGTCCATCCATGTCTCTGGAGGCGTGTaGATAATCCCCATCTATAAGCATGTGTCAGATGTAAAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LQGRGGMSIHVSGGV*IIPIYKHVSDVKAA
Trigger: GGCTGCCTTTACATCTGACACATGCTTATAGATGGGGATTATCAACACGCCTCCAGAGACATGGATGGACATTCCTCCCCTACCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466541.1
CDS GCA 72 bp CCTTCTTCGACCTTAGAGATGATTAATGGTTCTCCGTaGTCCAGGCCACCCTTTAGAGTAAAACCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: PSSTLEMINGSP*SRPPFRVKPQG
Trigger: TCCCTGGGGTTTTACTCTAAAGGGTGGCCTGGAGCACGGAGAACCATTAATCATCTCTAAGGTCGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000466541.1
ENST00000497440.5
CDS GCA 72 bp CTGTTCTCTGGACTCTTCTCCAGCACAGTATGCAGCTaGTCCTCTATGAATGGAGACTTCAGGGAGCCTAAA +
Preference number: 6 (lower is better)
Translates to: LFSGLFSSTVCS*SSMNGDFREPK
Trigger: TTTAGGCTCCCTGAAGTCTCCATTCATAGAGGAGCAGCTGCATACTGTGCTGGAGAAGAGTCCAGAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS GCA 72 bp GGCTGTGGGGATGAGAAGATGGTTTGTTACTGTGGGTaGTCTTTCTCTCATTGGAATGTGGGCTGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: GCGDEKMVCYCG*SFSHWNVGCCL
Trigger: AAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAACAAACCATCTTCTCATCCCCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp AGCCTGAGGGCATTTGAGGCTGTGGGGATGAGAAGATaGTTTGTTACTGTGGGTGCTCTTTCTCTCATTGGA +
Preference number: 6 (lower is better)
Translates to: SLRAFEAVGMRR*FVTVGALSLIG
Trigger: TCCAATGAGAGAAAGAGCACCCACAGTAACAAACCATCTTCTCATCCCCACAGCCTCAAATGCCCTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GCTGACGAAGTTAGAGGCACCAGTATCTGCATGGCCTaGGTCTGTGCACACATCTATGTTTCGTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: ADEVRGTSICMA*VCAHIYVSLSS
Trigger: AGAAGACAACGAAACATAGATGTGTGCACAGACCCAGGCCATGCAGATACTGGTGCCTCTAACTTCGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CAA 72 bp GAAGATGGTTTGTTACTGTGGGTGCTCTTTCTCTCATaGGAATGTGGGCTGTTGCCTTGGGGAGGTGTGAGA +
Preference number: 6 (lower is better)
Translates to: EDGLLLWVLFLS*ECGLLPWGGVR
Trigger: TCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAACAAACCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp TTGTCTCCTCGAAGTCATTCCCAGAAGTACTGGAAGTaGAGACGGTCCTGTGGGGCCTATAGTTATGGCCAA +
Preference number: 6 (lower is better)
Translates to: LSPRSHSQKYWK*RRSCGAYSYGQ
Trigger: TTGGCCATAACTATAGGCCCCACAGGACCGTCTCAACTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp AGGGAGGCATCCTCCTCATTTTCAGGCACTGAACAGAAATGGACTTaGGAGGGGACATACTTGGCTGTAGCTTCTGGTTTCTTCTCCACT +
Preference number: 6 (lower is better)
Translates to: REASSSFSGTEQKWT*EGTYLAVASGFFST
Trigger: AGTGGAGAAGAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGAGGATGCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 90 bp TCTGTGCACACATCTCTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGCGTGACACTG +
Preference number: 6 (lower is better)
Translates to: SVHTSLKEVYAQAGP*SSVICWSFLSCVTL
Trigger: CAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGAGATGTGTGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481002.5
CDS CAA 90 bp CCATGTCGAACAAACCTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGCGTGACACTG +
Preference number: 6 (lower is better)
Translates to: PCRTNLKEVYAQAGP*SSVICWSFLSCVTL
Trigger: CAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGGTTTGTTCGACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS TCA 72 bp GTTAAAGTGGAGAGGTTAATGTTGGGAAAATACCACTaGAAGTACAGCCCCCAGCAGGAATGGGCTCACTCG +
Preference number: 6 (lower is better)
Translates to: VKVERLMLGKYH*KYSPQQEWAHS
Trigger: CGAGTGAGCCCATTCCTGCTGGGGGCTGTACTTTCAGTGGTATTTTCCCAACATTAACCTCTCCACTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS TCA 72 bp TGGGTCTGTGCACACATCTATGTTTCGTTGTCTTCTTaGGTTTTGGGTCCCAAGTCTGGGAAGCATCAGAGC +
Preference number: 6 (lower is better)
Translates to: WVCAHIYVSLSS*VLGPKSGKHQS
Trigger: GCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGATGTGTGCACAGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS GCA 72 bp TACCACATGGGCTGCACCAGGCATGTGCCTTTCCCTTaGAATTGTCACTTTAGAAAGTTTGTTGAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: YHMGCTRHVPFP*NCHFRKFVEAG
Trigger: CCCAGCTTCAACAAACTTTCTAAAGTGACAATTGCAAGGGAAAGGCACATGCCTGGTGCAGCCCATGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp GAGGCATCCTCCTCATTTTCAGGCACTGAACAGAAATaGACTTTGGAGGGGACATACTTGGCTGTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: EASSSFSGTEQK*TLEGTYLAVAS
Trigger: AGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGAGGATGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CCA 72 bp GTGCTTTTGTCTCCTCGAAGTCATTCCCAGAAGTACTaGAAGTTGAGACGGTCCTGTGGGGCCTATAGTTAT +
Preference number: 6 (lower is better)
Translates to: VLLSPRSHSQKY*KLRRSCGAYSY
Trigger: ATAACTATAGGCCCCACAGGACCGTCTCAACTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp AGCAAACTCAGGCAAGCAGTGCTTCTACAGCACAAGTaGTCCCATCCTTCAGGACACACAATGGCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: SKLRQAVLLQHK*SHPSGHTMAKR
Trigger: TCTTTTGGCCATTGTGTGTCCTGAAGGATGGGACAACTTGTGCTGTAGAAGCACTGCTTGCCTGAGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CAA 72 bp TTGGTGGCCGTGTTAGAGTTTAATGTGGCACTAGGCTaGTGGAAGTCTTCAGTGGTCCTCATCATGCCAAAC +
Preference number: 6 (lower is better)
Translates to: LVAVLEFNVALG*WKSSVVLIMPN
Trigger: GTTTGGCATGATGAGGACCACTGAAGACTTCCACAAGCCTAGTGCCACATTAAACTCTAACACGGCCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CAA 72 bp GGGGTTCAGCTGACTCAGAGAAACGAATGTGTGCTTTaGTCTCCTCGAAGTCATTCCCAGAAGTACTGGAAG +
Preference number: 6 (lower is better)
Translates to: GVQLTQRNECVL*SPRSHSQKYWK
Trigger: CTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAAAAGCACACATTCGTTTCTCTGAGTCAGCTGAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp CTGGGTCTGTGCACACATCTATGTTTCGTTGTCTTCTaGAGTTTTGGGTCCCAAGTCTGGGAAGCATCAGAG +
Preference number: 6 (lower is better)
Translates to: LGLCTHLCFVVF*SFGSQVWEASE
Trigger: CTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGATGTGTGCACAGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646790.1
CDS CAA 90 bp TCAGCAAGTTCACATCTCGGGGAAACAAACCTTCCATCAGGTCCATaGTTGTCTTCAGCCTGGAGTCTGGATCCAAAATGTCTGCTAGAG +
Preference number: 6 (lower is better)
Translates to: SASSHLGETNLPSGP*LSSAWSLDPKCLLE
Trigger: CTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAGATGTGAACTTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp GTTGTCTTCAGCCTGGAGTCTGGATCCAAAATGTCTGCTAGAGATTaGTCTTGGTGGACAATTTCCTTGGCCAAAGCCTCTGTTCTGATG +
Preference number: 6 (lower is better)
Translates to: VVFSLESGSKMSARD*SWWTISLAKASVLM
Trigger: CATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp GCAAGTTCACATCTCGGGGAAACAAACCTTCCATCAGGTCCATTGTaGTCTTCAGCCTGGAGTCTGGATCCAAAATGTCTGCTAGAGATT +
Preference number: 6 (lower is better)
Translates to: ASSHLGETNLPSGPL*SSAWSLDPKCLLEI
Trigger: AATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAGATGTGAACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS TCA 72 bp AATGTAAATCCTCCTCCAGGAATTCTGGGTTCTCACTaGAGCCCCCAAGTGGTATACATCTCTACTCCGTTC +
Preference number: 6 (lower is better)
Translates to: NVNPPPGILGSH*SPQVVYISTPF
Trigger: GAACGGAGTAGAGATGTATACCACTTGGGGGCTTCAGTGAGAACCCAGAATTCCTGGAGGAGGATTTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS TCA 72 bp TGCTTCCTTGTCTTCATTCCTCTTGCCTTCACATCCTaGAGAGCTGACAGTTCTCTGTATGGCCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: CFLVFIPLAFTS*RADSSLYGLPL
Trigger: AAGAGGAAGGCCATACAGAGAACTGTCAGCTCTTCAGGATGTGAAGGCAAGAGGAATGAAGACAAGGAAGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CCA 72 bp GCAACCCTCTGGCCAATTGGATGTCATATTCAGTCGTaGAATAAAAAGCCATTCTGCCCTGCTACTGCTCTT +
Preference number: 6 (lower is better)
Translates to: ATLWPIGCHIQS*NKKPFCPATAL
Trigger: AAGAGCAGTAGCAGGGCAGAATGGCTTTTTATTCCACGACTGAATATGACATCCAATTGGCCAGAGGGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644244.1
CDS CAA 72 bp TCCTCCTCATTTTCAGGCACTGAACAGAAATGGACTTaGGAGGGGACATACTTGGCTGTAGCTTCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: SSSFSGTEQKWT*EGTYLAVASGF
Trigger: GAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296043.7
ENST00000486758.5
ENST00000646790.1
CDS CAA 72 bp AGCCTGGAGTCTGGATCCAAAATGTCTGCTAGAGATTaGTCTTGGTGGACAATTTCCTTGGCCAAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SLESGSKMSARD*SWWTISLAKAS
Trigger: AGAGGCTTTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp TCACATCTCGGGGAAACAAACCTTCCATCAGGTCCATaGTTGTCTTCAGCCTGGAGTCTGGATCCAAAATGT +
Preference number: 6 (lower is better)
Translates to: SHLGETNLPSGP*LSSAWSLDPKC
Trigger: ACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp GAAACACTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: ETLKEVYAQAGP*SSVICWSFLSC
Trigger: GCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425645.2
CDS CAA 72 bp AGGGGAGGAATGTCCATCCATGTCTCTGGAGGCGTGTaGATAATCCCCATCTATAAGCATGTGTCAGATGTA +
Preference number: 6 (lower is better)
Translates to: RGGMSIHVSGGV*IIPIYKHVSDV
Trigger: TACATCTGACACATGCTTATAGATGGGGATTATCAACACGCCTCCAGAGACATGGATGGACATTCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466541.1
CDS CAA 72 bp ACATCTCTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: TSLKEVYAQAGP*SSVICWSFLSC
Trigger: GCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481002.5
CDS CAA 72 bp ACAAACCTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: TNLKEVYAQAGP*SSVICWSFLSC
Trigger: GCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS TCA 72 bp GGCAACAAGAGCAAAAACTATGTTTCGTTGTCTTCTTaGGTTTTGGGTCCCAAGTCTGGGAAGCATCAGAGC +
Preference number: 6 (lower is better)
Translates to: GNKSKNYVSLSS*VLGPKSGKHQS
Trigger: GCTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGTTTTTGCTCTTGTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425645.2
CDS CCA 72 bp TACAGCACAAGTTGTCCCATCCTTCAGGACACACAATaGCCAAAAGAGAGGTTTGGAGAAGCAAATTCTTCC +
Preference number: 6 (lower is better)
Translates to: YSTSCPILQDTQ*PKERFGEANSS
Trigger: GGAAGAATTTGCTTCTCCAAACCTCTCTTTTGGCCATTGTGTGTCCTGAAGGATGGGACAACTTGTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CAA 72 bp CAAGAGGTGTGTCTGGGTCAGAAGTGCTGCATAAACTaGGAAGACTCTGCTGTTTTTGATAGTGCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: QEVCLGQKCCIN*EDSAVFDSASG
Trigger: ACCTGAAGCACTATCAAAAACAGCAGAGTCTTCCAAGTTTATGCAGCACTTCTGACCCAGACACACCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp GGGCAACAAGAGCAAAAACTATGTTTCGTTGTCTTCTaGAGTTTTGGGTCCCAAGTCTGGGAAGCATCAGAG +
Preference number: 6 (lower is better)
Translates to: GQQEQKLCFVVF*SFGSQVWEASE
Trigger: CTCTGATGCTTCCCAGACTTGGGACCCAAAACTCAAGAAGACAACGAAACATAGTTTTTGCTCTTGTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425645.2
CDS CAA 90 bp ATTATAAAGGAAACACTTAAGGAAGTCTATGCCCAGGCAGGTCCATaGTCCTCAGTTATCTGTTGGTCATTTCTGTCCTGCGTGACACTG +
Preference number: 6 (lower is better)
Translates to: IIKETLKEVYAQAGP*SSVICWSFLSCVTL
Trigger: CAGTGTCACGCAGGACAGAAATGACCAACAGATAACTGAGGACAATGGACCTGCCTGGGCATAGACTTCCTTAAGTGTTTCCTTTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425645.2
CDS GCA 72 bp AAATTTAAAATGCCTGAAGCAAACTCAGGCAAGCAGTaGTTCTACAGCACAAGTTGTCCCATCCTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: KFKMPEANSGKQ*FYSTSCPILQD
Trigger: GTCCTGAAGGATGGGACAACTTGTGCTGTAGAAGCACTGCTTGCCTGAGTTTGCTTCAGGCATTTTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 72 bp ACAAACCTTCCATCAGGTCCATTGTTGTCTTCAGCCTaGAGTCTGGATCCAAAATGTCTGCTAGAGATTTGT +
Preference number: 6 (lower is better)
Translates to: TNLPSGPLLSSA*SLDPKCLLEIC
Trigger: ACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 72 bp ATGTCTGCTAGAGATTTGTCTTGGTGGACAATTTCCTaGGCCAAAGCCTCTGTTCTGATGTCTTCTGAACTC +
Preference number: 6 (lower is better)
Translates to: MSARDLSWWTIS*AKASVLMSSEL
Trigger: GAGTTCAGAAGACATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGCAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296043.7
ENST00000646790.1
CDS CAA 90 bp CAAGTTGTCCCATCCTTCAGGACACACAATGGCCAAAAGAGAGGTTaGGAGAAGCAAATTCTTCCATACGTAAAATGTTCTTCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: QVVPSFRTHNGQKRG*EKQILPYVKCSSKL
Trigger: CAGCTTGGAAGAACATTTTACGTATGGAAGAATTTGCTTCTCCAAACCTCTCTTTTGGCCATTGTGTGTCCTGAAGGATGGGACAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CCA 72 bp AAATACGGTGACAGCAACCCCAGAGAAAAGACAGGATaGTCCCTGAAGTATGTGTCAATTGATTTACAAGTA +
Preference number: 6 (lower is better)
Translates to: KYGDSNPREKTG*SLKYVSIDLQV
Trigger: TACTTGTAAATCAATTGACACATACTTCAGGGACCATCCTGTCTTTTCTCTGGGGTTGCTGTCACCGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS CAA 72 bp CTTACTATGCTTCGGCTCACTTCAGAATTTTCTAACTaGTCCCGAAGAGACAGAGAAGCTGTGCTAAAACTT +
Preference number: 6 (lower is better)
Translates to: LTMLRLTSEFSN*SRRDREAVLKL
Trigger: AAGTTTTAGCACAGCTTCTCTGTCTCTTCGGGACAAGTTAGAAAATTCTGAAGTGAGCCGAAGCATAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296043.7
CDS CAA 90 bp CCAACCAATCAATACAATCCAATTTTGCTGTTGAAGTGCAATTCATaGATTCACCCATGTCGAACAAACCTTAAGGAAGTCTATGCCCAG +
Preference number: 6 (lower is better)
Translates to: PTNQYNPILLLKCNS*IHPCRTNLKEVYAQ
Trigger: CTGGGCATAGACTTCCTTAAGGTTTGTTCGACATGGGTGAATCAATGAATTGCACTTCAACAGCAAAATTGGATTGTATTGATTGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS CAA 90 bp GATGAGAAGAGTGAGCCAACCAATCAATACAATCCAATTTTGCTGTaGAAGTGCAATTCATTGATTCACCCATGTCGAACAAACCTTAAG +
Preference number: 6 (lower is better)
Translates to: DEKSEPTNQYNPILL*KCNSLIHPCRTNLK
Trigger: CTTAAGGTTTGTTCGACATGGGTGAATCAATGAATTGCACTTCAACAGCAAAATTGGATTGTATTGATTGGTTGGCTCACTCTTCTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS CAA 72 bp AGTGAGCCAACCAATCAATACAATCCAATTTTGCTGTaGAAGTGCAATTCATTGATTCACCCATGTCGAACA +
Preference number: 6 (lower is better)
Translates to: SEPTNQYNPILL*KCNSLIHPCRT
Trigger: TGTTCGACATGGGTGAATCAATGAATTGCACTTCAACAGCAAAATTGGATTGTATTGATTGGTTGGCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS CAA 72 bp GAGAAGAGTGAGCCAACCAATCAATACAATCCAATTTaGCTGTTGAAGTGCAATTCATTGATTCACCCATGT +
Preference number: 6 (lower is better)
Translates to: EKSEPTNQYNPI*LLKCNSLIHPC
Trigger: ACATGGGTGAATCAATGAATTGCACTTCAACAGCAAAATTGGATTGTATTGATTGGTTGGCTCACTCTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS CAA 72 bp CAATACAATCCAATTTTGCTGTTGAAGTGCAATTCATaGATTCACCCATGTCGAACAAACCTTAAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: QYNPILLLKCNS*IHPCRTNLKEV
Trigger: GACTTCCTTAAGGTTTGTTCGACATGGGTGAATCAATGAATTGCACTTCAACAGCAAAATTGGATTGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484236.1
CDS CAA 72 bp AACTGTTATAAAGACAAACTCCCCTGTAATTTGGTTTaGGTAATAAGGGAAAAACTGGATTCACTGAAGCAA +
Preference number: 6 (lower is better)
Translates to: NCYKDKLPCNLV*VIREKLDSLKQ
Trigger: TTGCTTCAGTGAATCCAGTTTTTCCCTTATTACCAAAACCAAATTACAGGGGAGTTTGTCTTTATAACAGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473602.1
CDS CAA 72 bp ACCTATATCTTTATAAGGAAACCAGGTAAGGGACACTaGAGAAACTCAACTCATGAAAACAAATGCTACTTT +
Preference number: 6 (lower is better)
Translates to: TYIFIRKPGKGH*RNSTHENKCYF
Trigger: AAAGTAGCATTTGTTTTCATGAGTTGAGTTTCTCAAGTGTCCCTTACCTGGTTTCCTTATAAAGATATAGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486758.5