RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHROOM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164403

Ensembl transcript IDs: ENST00000319854.7, ENST00000378676.1, ENST00000378679.8, ENST00000440118.1, ENST00000488072.1, ENST00000495680.2, ENST00000606676.1, ENST00000617339.4

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCCCCACTTACGTGGGTaGGAGATAGGGGCGGTGCAC +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRPHLRG*EIGAVH
Trigger: GTGCACCGCCCCTATCTCTCACCCACGTAAGTGGGG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
3UTR-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCCCACTTACGTGGGTaGGAGATAGGGGCGGTGCAC +
Preference number: 2 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPHLRG*EIGAVH
Trigger: GTGCACCGCCCCTATCTCTCACCCACGTAAGTGGGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
3UTR-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCATCACCCCACTTACGTaGGTGAGAGATAGGGGCGGT +
Preference number: 2 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSITPLT*VRDRGG
Trigger: ACCGCCCCTATCTCTCACCCACGTAAGTGGGGTGAT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
3UTR-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCCCACTTACGTGGGTaGGAGATAGGGGCGGTGCAC +
Preference number: 2 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPHLRG*EIGAVH
Trigger: GTGCACCGCCCCTATCTCTCACCCACGTAAGTGGGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
3UTR-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCAGGCTGGAGTGCAGTaGCGCGATGTCCGCTCACTG +
Preference number: 2 (lower is better)
Translates to: INYQIIHKTWVRPHENTLQAGVQ*RDVRSL
Trigger: CAGTGAGCGGACATCGCGCCACTGCACTCCAGCCTG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
3UTR-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGATCACCCCACTTACGTaGGTGAGAGATAGGGGCGGT +
Preference number: 2 (lower is better)
Translates to: INYQIIHKTWVRPHENTLITPLT*VRDRGG
Trigger: ACCGCCCCTATCTCTCACCCACGTAAGTGGGGTGAT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
3UTR-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTATCTTAGAAAGGCCTaGACTGGGTCCTCCCCAATC +
Preference number: 2 (lower is better)
Translates to: INYQIIHKTWVRPHENTLYLRKA*TGSSPI
Trigger: GATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCATCAGGGTCGCTGTCTaGGGCCGCCCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSIRVAV*GRPGQG
Trigger: GCCCTGGCCCGGGCGGCCTCAGACAGCGACCCTGAT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCCCGGGACCTCTGTTaGCTGCGGCCCACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPRDLC*LRPTAG
Trigger: GCCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCATCAGGGTCGCTGTCTaGGGCCGCCCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRIRVAV*GRPGQG
Trigger: GCCCTGGCCCGGGCGGCCTCAGACAGCGACCCTGAT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCTGGCCCACGCTTGTaGCTCCCCCTGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPGPRL*LPLQPL
Trigger: GAGCGGCTGCAGGGGGAGGCACAAGCGTGGGCCAGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCGTCCAGGTTGCGCTaGTGGGCCAGGACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSSRLR*WARTAA
Trigger: GGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGACGA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGGCCTGCCTGTTCAGTaGTCCCGGGGTCCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSGLPVQ*SRGPRD
Trigger: GTCCCGGGGACCCCGGGACCACTGAACAGGCAGGCC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGTGAGGAGCTCCGGGTaGGGGCTGGGACAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSVRSSG*GLGQPA
Trigger: AGCAGGCTGTCCCAGCCCTCACCCGGAGCTCCTCAC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAGCAGCGGGGTGGCCTaGCTGTTCAGTGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSSGVA*LFSGPG
Trigger: CCCGGGACCACTGAACAGGCAGGCCACCCCGCTGCT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCTTGTGCCTCCCCCTaGAGCCGCTCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSACASP*SRSCSV
Trigger: CACGGAGCAGGAGCGGCTGCAGGGGGAGGCACAAGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCGTCCAGGTTGCGCTaGTGGGCCAGGACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSSRLR*WARTAA
Trigger: GGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGACGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCACCACTTCCGCTGCTaGTTGGCGAGGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSHHFRC*LARGPR
Trigger: CCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCAGGGAGGCCAGAGCTaGAGCAGGCCTCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSQGGQS*SRPHPG
Trigger: GCCTGGGTGAGGCCTGCTCCAGCTCTGGCCTCCCTG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCCTCCAGAGCCGCTTaGCGCCTGGCCCACGCTTGT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSASRAA*RLAHAC
Trigger: ACAAGCGTGGGCCAGGCGCCAAGCGGCTCTGGAGGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCAGGTTGCGCTGCTaGGCCAGGACGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSRLRC*ARTAAL
Trigger: CAAGGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTGCGCAGATGAGTGCTaGGGCTGGGTGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSCADEC*GWVAAW
Trigger: CCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAGCAGCGGGGTGGCCTaGCTGTTCAGTGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSSGVA*LFSGPG
Trigger: CCCGGGACCACTGAACAGGCAGGCCACCCCGCTGCT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCTTGTGCCTCCCCCTaGAGCCGCTCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRACASP*SRSCSV
Trigger: CACGGAGCAGGAGCGGCTGCAGGGGGAGGCACAAGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCTGGCCCACGCTTGTaGCTCCCCCTGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPGPRL*LPLQPL
Trigger: GAGCGGCTGCAGGGGGAGGCACAAGCGTGGGCCAGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCACAGGCCTGGCGCACTaGAGCCTCCAGAGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSTGLAH*SLQSRL
Trigger: CAAGCGGCTCTGGAGGCTGCAGTGCGCCAGGCCTGT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTGCGCTCGTCCAGGTTaGGCTGCTGGGCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRCARPG*AAGPGR
Trigger: CCGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCGGAGCTCCTTGCGCTaGAACGACGTCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSRSSLR*NDVSRS
Trigger: GCTCCGGGAGACGTCGTTCCAGCGCAAGGAGCTCCG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCAGGGAGGCCAGAGCTaGAGCAGGCCTCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRQGGQS*SRPHPG
Trigger: GCCTGGGTGAGGCCTGCTCCAGCTCTGGCCTCCCTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCCAGCGCCGGATGCTaGAACTCCAAGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRASAGC*NSKGSG
Trigger: GCCCGAGCCCTTGGAGTTCCAGCATCCGGCGCTGGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGAGCCGCTTGGCGCCTaGCCCACGCTTGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPEPLGA*PTLVPP
Trigger: GGGAGGCACAAGCGTGGGCCAGGCGCCAAGCGGCTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCCTCCAGAGCCGCTTaGCGCCTGGCCCACGCTTGT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRASRAA*RLAHAC
Trigger: ACAAGCGTGGGCCAGGCGCCAAGCGGCTCTGGAGGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGAAGGGCGGCTGAACTaGAGGACAGGTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSEGRLN*RTGPWG
Trigger: CCCCCAGGGACCTGTCCTCCAGTTCAGCCGCCCTTC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGGCTGGGTGGCTGCGTaGGTCACTTCCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRGWVAA*VTSPPW
Trigger: CCAGGGAGGGGAAGTGACCCACGCAGCCACCCAGCC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAGATGTGGTGCCGGGTaGGGAGCTCCGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPRCGAG*GAPGEG
Trigger: GCCCTCACCCGGAGCTCCTCACCCGGCACCACATCT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGGCCAAGGTCGTCCCTaGTGGCGTCCAGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSGQGRP*WRPVGP
Trigger: AGGACCAACTGGACGCCATCAGGGACGACCTTGGCC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAGAGGGAAGGGCGGCTaGACTGGAGGACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSRGKGG*TGGQVP
Trigger: AGGGACCTGTCCTCCAGTTCAGCCGCCCTTCCCTCT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGGGGCCGCCGGAGGCTaGGGAGAAAGAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPGAAGG*GERAVG
Trigger: GCCTACAGCTCTTTCTCCGCAGCCTCCGGCGGCCCC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCACAGGCCTGGCGCACTaGAGCCTCCAGAGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRTGLAH*SLQSRL
Trigger: CAAGCGGCTCTGGAGGCTGCAGTGCGCCAGGCCTGT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTTGGCGTCCTCCTCCTaGCGCTGCAGGAGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLASSS*RCRSRS
Trigger: ACTCCGGCTCCTGCAGCGGCAGGAGGAGGACGCCAA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCGCGCCGCGCTACGTaGTCCTTCAGCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSRRAT*SFSSLA
Trigger: CGCCAAGGAGCTGAAGGAGCACGTAGCGCGGCGCGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTGCGCTCGTCCAGGTTaGGCTGCTGGGCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPCARPG*AAGPGR
Trigger: CCGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCGCCCAGGCTGGAGTaGAGTGGCGCGATGTCCGCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSPRLE*SGAMSA
Trigger: AGCGGACATCGCGCCACTGCACTCCAGCCTGGGCGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAGGAGCCGGAGTCGCTaGAGCAGGGAGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRRSRSR*SREACS
Trigger: TGAGCAGGCCTCCCTGCTGCAGCGACTCCGGCTCCT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCGAGTCCGCGCGCATaGACAGATGCCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPSPRA*TDATGP
Trigger: TGGACCTGTGGCATCTGTCCATGCGCGCGGACTCGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCGTACAGCAGCGGGGTaGCCTGCCTGTTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSRTAAG*PACSVV
Trigger: GACCACTGAACAGGCAGGCCACCCCGCTGCTGTACG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCACCACTTCCGCTGCTaGTTGGCGAGGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPHHFRC*LARGPR
Trigger: CCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCAGGGAGGCCAGAGCTaGAGCAGGCCTCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPQGGQS*SRPHPG
Trigger: GCCTGGGTGAGGCCTGCTCCAGCTCTGGCCTCCCTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCTCCTTCAGCTCCTTaGCGTCCTCCTCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSAPSAP*RPPPAA
Trigger: AGCGGCAGGAGGAGGACGCCAAGGAGCTGAAGGAGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTCCAGGTTGCGCTGCTaGGCCAGGACGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSRLRC*ARTAAL
Trigger: CAAGGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGAAGGGCGGCTGAACTaGAGGACAGGTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPREGRLN*RTGPWG
Trigger: CCCCCAGGGACCTGTCCTCCAGTTCAGCCGCCCTTC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCAGGCTGGAGTGCAGTaGCGCGATGTCCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSQAGVQ*RDVRSL
Trigger: CAGTGAGCGGACATCGCGCCACTGCACTCCAGCCTG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGGCTGGGTGGCTGCGTaGGTCACTTCCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPGWVAA*VTSPPW
Trigger: CCAGGGAGGGGAAGTGACCCACGCAGCCACCCAGCC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAGTGCTGAGGCTGGGTaGCTGCGTGGGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSAEAG*LRGSLP
Trigger: GGGAAGTGACCCACGCAGCCACCCAGCCTCAGCACT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCCGACTGGCGGGCCTaGAGGCATCACCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSDWRA*RHHRAS
Trigger: TGAAGCTCGGTGATGCCTTCAGGCCCGCCAGTCGGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCACCCAAGACTTCGCCTaGAGCGCTCCGACTCCGACT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSTQDFA*SAPTPT
Trigger: AGTCGGAGTCGGAGCGCTTCAGGCGAAGTCTTGGGT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCTGGGAGACGGGGCATaGTGGCCAAGGTCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLGDGA*WPRSSL
Trigger: CAGGGACGACCTTGGCCATCATGCCCCGTCTCCCAG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAGAGGGAAGGGCGGCTaGACTGGAGGACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRRGKGG*TGGQVP
Trigger: AGGGACCTGTCCTCCAGTTCAGCCGCCCTTCCCTCT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGACAAAGTGAGGCTCTaGGGCTCCCGCCGAGACGCG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPDKVRL*GSRRDA
Trigger: CGCGTCTCGGCGGGAGCCTCAGAGCCTCACTTTGTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378679.8
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAAGCACCACTTCCGCTaGTGGTTGGCGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRKHHFR*WLARGP
Trigger: GGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTTAGCCAGCGCCGGATaGTGGAACTCCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSLASAG*WNSKGS
Trigger: CGAGCCCTTGGAGTTCCAGCATCCGGCGCTGGCTAA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAACCAGGCTGGCCAGTaGCCCTGGCTAGGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSNQAGQ*PWLGQY
Trigger: ATACTGCCCTAGCCAGGGGCACTGGCCAGCCTGGTT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTCGCGCCGCGCTACGTaGTCCTTCAGCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSRRAT*SFSSLA
Trigger: CGCCAAGGAGCTGAAGGAGCACGTAGCGCGGCGCGA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCGATGTCCGCTCACTaGAAGCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSAMSAH*KLHLPG
Trigger: ACCTGGGAGGTGGAGCTTGCAGTGAGCGGACATCGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCTCCAACCAACCCCTaGCAGCCCCACACTCTCATC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPPTNP*QPHTLI
Trigger: GATGAGAGTGTGGGGCTGGCAGGGGTTGGTTGGAGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCCGAGTCCGCGCGCATaGACAGATGCCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRPSPRA*TDATGP
Trigger: TGGACCTGTGGCATCTGTCCATGCGCGCGGACTCGG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAGGTTCATGGAGCCTTaGGGTTGCGTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSRFMEP*GCVSGS
Trigger: GCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGGCCCCTGGGAGGCATaGGGGTCTGGTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPGPWEA*GSGGDL
Trigger: GAGATCACCACCAGACCCCCATGCCTCCCAGGGGCC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCTGGCCAGTGCCCCTaGCTAGGGCAGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSAGQCP*LGQYCE
Trigger: CTCACAATACTGCCCTAGCCAGGGGCACTGGCCAGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGGCTCTGGGCTGGGCTaGGAAGCAAGAGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSGSGLG*EARGSH
Trigger: ATGTGACCCTCTTGCTTCCCAGCCCAGCCCAGAGCC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCCCTGCCCACATGGCTaGTCAAGCACAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRPCPHG*SSTGWV
Trigger: CACCCACCCTGTGCTTGACCAGCCATGTGGGCAGGG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGAAGGGCGGCTGAACTaGAGGACAGGTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPEGRLN*RTGPWG
Trigger: CCCCCAGGGACCTGTCCTCCAGTTCAGCCGCCCTTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCCACCGCGCCCGGCTaGAGGAGTATCTTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSATAPG*RSILER
Trigger: CCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCAGGCTGGAGTGCAGTaGCGCGATGTCCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRQAGVQ*RDVRSL
Trigger: CAGTGAGCGGACATCGCGCCACTGCACTCCAGCCTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGTCACTTCCCCTCCCTaGTCACACCGTCACAAGCGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSVTSPP*SHRHKR
Trigger: GCGCTTGTGACGGTGTGACCAGGGAGGGGAAGTGAC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCAGCTTTCCTGGCTCTaGGAAGCACCACTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSQLSWL*EAPLPL
Trigger: CAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGGGTATGGTCCCTCCTaGTCCTCCCCAGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRGYGPS*SSPGTQ
Trigger: TTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCGCGCATGGACAGATaGCACAGGTCCAGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRARMDR*HRSRLL
Trigger: TAGCAGCCTGGACCTGTGGCATCTGTCCATGCGCGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCATGCGGAGCTCCTTaGGCTGGAACGACGTCTCCC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSCGAP*AGTTSP
Trigger: GGGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAAGCACCACTTCCGCTaGTGGTTGGCGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPKHHFR*WLARGP
Trigger: GGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTGGTCTGGGGGTTTCTaGTCCTTGGGGAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSWSGGF*SLGNSL
Trigger: CAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCTGCCAGCAGTCATCTaGCCCTGCAGTTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSLPAVI*PCSSWT
Trigger: TGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAACCAGGCTGGCCAGTaGCCCTGGCTAGGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRNQAGQ*PWLGQY
Trigger: ATACTGCCCTAGCCAGGGGCACTGGCCAGCCTGGTT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCTGAAGGAGGCGGATaGGCTCGTCCAGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPEGGG*ARPGCA
Trigger: AGCGCAACCTGGACGAGCGCATCCGCCTCCTTCAGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCGATGTCCGCTCACTaGAAGCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRAMSAH*KLHLPG
Trigger: ACCTGGGAGGTGGAGCTTGCAGTGAGCGGACATCGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGACCAGCTCATTCCCTaGCAGGCTCCCCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPDQLIP*QAPLAH
Trigger: GTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGGGAAAACACAGATGTaGTGCCGGGTGAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSGKTQM*CRVRSS
Trigger: GGAGCTCCTCACCCGGCACCACATCTGTGTTTTCCC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCGTACAGCAGCGGGGTaGCCTGCCTGTTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPRTAAG*PACSVV
Trigger: GACCACTGAACAGGCAGGCCACCCCGCTGCTGTACG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCGGAGTCCAGGTTCATaGAGCCTTGGGGTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSRSPGS*SLGVAS
Trigger: AGACGCAACCCCAAGGCTCCATGAACCTGGACTCCG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCTGGACAATGGGTATaGTCCCTCCTGATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPGQWV*SLLILP
Trigger: GGGGAGGATCAGGAGGGACCATACCCATTGTCCAGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGTTCCTGGACACTCATaGAGCGGGTACTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSVPGHS*SGYSVG
Trigger: CCCCACAGAGTACCCGCTCCATGAGTGTCCAGGAAC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGGCTCTGGGCTGGGCTaGGAAGCAAGAGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRGSGLG*EARGSH
Trigger: ATGTGACCCTCTTGCTTCCCAGCCCAGCCCAGAGCC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCCTGCCCACATGGCTaGTCAAGCACAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPCPHG*SSTGWV
Trigger: CACCCACCCTGTGCTTGACCAGCCATGTGGGCAGGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCTCCTTCAGCTCCTTaGCGTCCTCCTCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPAPSAP*RPPPAA
Trigger: AGCGGCAGGAGGAGGACGCCAAGGAGCTGAAGGAGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCCACCGCGCCCGGCTaGAGGAGTATCTTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRATAPG*RSILER
Trigger: CCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCACCGTCACAAGCGCTaGCATCCCCCAGATTTTGGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSHRHKR*HPPDFG
Trigger: GCCAAAATCTGGGGGATGCCAGCGCTTGTGACGGTG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAGTGCTGAGGCTGGGTaGCTGCGTGGGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSAEAG*LRGSLP
Trigger: GGGAAGTGACCCACGCAGCCACCCAGCCTCAGCACT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCTAAGAAAGGAGGGGTaGGGGAAGACCCAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSLRKEG*GKTQGK
Trigger: CTTGCCCTGGGTCTTCCCCCACCCCTCCTTTCTTAG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGGGTATGGTCCCTCCTaGTCCTCCCCAGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPGYGPS*SSPGTQ
Trigger: TTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAAAACACAGATGTGGTaGCGGGTGAGGAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRKTQMW*RVRSSG
Trigger: CCCGGAGCTCCTCACCCGGCACCACATCTGTGTTTT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCGCGCATGGACAGATaGCACAGGTCCAGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPARMDR*HRSRLL
Trigger: TAGCAGCCTGGACCTGTGGCATCTGTCCATGCGCGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTTAGCCAGCGCCGGATaGTGGAACTCCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLASAG*WNSKGS
Trigger: CGAGCCCTTGGAGTTCCAGCATCCGGCGCTGGCTAA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTGGTCTGGGGGTTTCTaGTCCTTGGGGAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRWSGGF*SLGNSL
Trigger: CAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCACTGTCAGCAGGGCTaGTCTGGGGTAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRHCQQG*SGVTLQ
Trigger: CTGCAGAGTTACCCCAGAGCAGCCCTGCTGACAGTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCAGTCATCTGCCCCTaGAGTTCCTGGACACTCATG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSAVICP*SSWTLM
Trigger: CATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGAACCATTCACCCCCTaGCAGCAGTCATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPREPFTP*QQSSAP
Trigger: AGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCTGTTCCACCCAGGCTaGTTCCTGGCCGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLFHPG*FLAVLL
Trigger: CAACAGAACGGCCAGGAAGCAGCCTGGGTGGAACAG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCTCCAACCAACCCCTaGCAGCCCCACACTCTCATC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPPTNP*QPHTLI
Trigger: GATGAGAGTGTGGGGCTGGCAGGGGTTGGTTGGAGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCGGAGTCCAGGTTCATaGAGCCTTGGGGTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRRSPGS*SLGVAS
Trigger: AGACGCAACCCCAAGGCTCCATGAACCTGGACTCCG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTGCCCCTGCAGTTCCTaGACACTCATGGAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRCPCSS*TLMERV
Trigger: TACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGTCCCAGTGGGGGTGTaGCTTGTGGGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRVPVGV*LVGLEI
Trigger: TATTTCCAGGCCCACAAGCCACACCCCCACTGGGAC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCACTCTCTGCAGCTGTaGGGGGATTGGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRHSLQL*GDWWSV
Trigger: GACTGACCACCAATCCCCCCACAGCTGCAGAGAGTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCTGGCCAGTGCCCCTaGCTAGGGCAGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPAGQCP*LGQYCE
Trigger: CTCACAATACTGCCCTAGCCAGGGGCACTGGCCAGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCTGGCTCAAAAGTACTaGCAGCCTCCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSLAQKY*QPPLQP
Trigger: AGGCTGGAGAGGAGGCTGCCAGTACTTTTGAGCCAG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGTCACTTCCCCTCCCTaGTCACACCGTCACAAGCGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPVTSPP*SHRHKR
Trigger: GCGCTTGTGACGGTGTGACCAGGGAGGGGAAGTGAC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCACCGCAGCCTCTTTCTaGGGCAAGAACCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSTAASF*GKNLES
Trigger: ACTTTCCAGGTTCTTGCCTCAGAAAGAGGCTGCGGT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCACAATGCAGGTCTCTaGGACCCTCTGTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSHNAGL*DPLFTV
Trigger: GACAGTGAACAGAGGGTCTCAGAGACCTGCATTGTG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGTGGTGATCTCATTCTaGCCAGTGGGGCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSVVISF*PVGPLL
Trigger: TAGAAGAGGCCCCACTGGTCAGAATGAGATCACCAC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGCTAGGGCAGTATTGTaGGAGGGACCTGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSARAVL*EGPGVS
Trigger: TGATACTCCAGGTCCCTCTCACAATACTGCCCTAGC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCACTGTCAGCAGGGCTaGTCTGGGGTAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPHCQQG*SGVTLQ
Trigger: CTGCAGAGTTACCCCAGAGCAGCCCTGCTGACAGTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCAGTCATCTGCCCCTaGAGTTCCTGGACACTCATG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRAVICP*SSWTLM
Trigger: CATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGAACCATTCACCCCCTaGCAGCAGTCATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPEPFTP*QQSSAP
Trigger: AGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGATGCTGTTGTTTGGTaGAGGGAGCCCCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPDAVVW*REPLPT
Trigger: TGTGGGCAGGGGCTCCCTGCACCAAACAACAGCATC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCTGTTCCACCCAGGCTaGTTCCTGGCCGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLFHPG*FLAVLL
Trigger: CAACAGAACGGCCAGGAAGCAGCCTGGGTGGAACAG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCTGCCAGGCTCCCCTTaGCCACACAAGCAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLPGSP*PHKQPL
Trigger: TAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTACACTTCCCCTCCCTaGTCACACCGTCACAAGCGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPYTSPP*SHRHKR
Trigger: GCGCTTGTGACGGTGTGACCAGGGAGGGGAAGTGTA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTGGCTGCGTGGGTCCTaGGAAAACACAGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRWLRGS*ENTDVV
Trigger: CACCACATCTGTGTTTTCCCAGGACCCACGCAGCCA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCCTTGGGGAACAGCCTaGACAATGGGTATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRPWGTA*TMGMVP
Trigger: AGGGACCATACCCATTGTCCAGGCTGTTCCCCAAGG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGGGGTTTCTGCTCCTTaGGGAACAGCCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRGVSAP*GTAWTM
Trigger: CATTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGTGGGGACTGTAACCTaGCCAGTTCTTTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSVGTVT*PVLWPK
Trigger: CTTAGGCCAAAGAACTGGCCAGGTTACAGTCCCCAC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGTTCCTGGACACTCATaGAGCGGGTACTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPVPGHS*SGYSVG
Trigger: CCCCACAGAGTACCCGCTCCATGAGTGTCCAGGAAC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTGGGGGTGTGGCTTGTaGGCCTGGAAATACCTACAG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRWGCGL*AWKYLQ
Trigger: CTGTAGGTATTTCCAGGCCCACAAGCCACACCCCCA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCACTCTCTGCAGCTGTaGGGGGATTGGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPHSLQL*GDWWSV
Trigger: GACTGACCACCAATCCCCCCACAGCTGCAGAGAGTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCTGGCTCAAAAGTACTaGCAGCCTCCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLAQKY*QPPLQP
Trigger: AGGCTGGAGAGGAGGCTGCCAGTACTTTTGAGCCAG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCTCAGGGGAAGGAATTaGGACCAGCTCATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLRGRN*DQLIPC
Trigger: GCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTTGGCAGAGTCACCTTaGGATCAGAGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLAESP*DQRWQR
Trigger: CCTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAGCCATCCGACCTCGTaGTCTTCAAACTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSHPTS*SSNLAS
Trigger: GCTGGCTAAGTTTGAAGATCACGAGGTCGGATGGCT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCACAATGCAGGTCTCTaGGACCCTCTGTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRHNAGL*DPLFTV
Trigger: GACAGTGAACAGAGGGTCTCAGAGACCTGCATTGTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTGGAGTATCATTGCCTaGAAGTCCCAAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSWSIIA*KSQGIS
Trigger: GCTGATGCCTTGGGACTTTCAGGCAATGATACTCCA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAATCAGGGTCGCTGTCTaGGGCCGCCCGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERIRVAV*GRPGQG
Trigger: GCCCTGGCCCGGGCGGCCTCAGACAGCGACCCTGAT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCTGGGTGAGGCCACATaGGAACACTTTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSLGEAT*EHFGEV
Trigger: TACTTCTCCAAAGTGTTCTCATGTGGCCTCACCCAG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCTGGGACAGCCTGCTaGCCCCGCCACCACGGACGG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERAGTAC*PRHHGR
Trigger: CCGTCCGTGGTGGCGGGGCCAGCAGGCTGTCCCAGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACCCCGGGACCTCTGTTaGCTGCGGCCCACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERPRDLC*LRPTAG
Trigger: GCCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCTTGGGGAACAGCCTaGACAATGGGTATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPWGTA*TMGMVP
Trigger: AGGGACCATACCCATTGTCCAGGCTGTTCCCCAAGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCAGTTCCATACGGCTaGTCAGAGGCATGGACACTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPVPYG*SEAWTL
Trigger: CAGTGTCCATGCCTCTGACCAGCCGTATGGAACTGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGTGGGGACTGTAACCTaGCCAGTTCTTTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRVGTVT*PVLWPK
Trigger: CTTAGGCCAAAGAACTGGCCAGGTTACAGTCCCCAC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGAGAGGGATCTAATCTaGCCAGCTCCTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRERDLI*PAPEPA
Trigger: AGCTGGTTCAGGAGCTGGCCAGATTAGATCCCTCTC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTGGTCAAGCACAGGGTaGGTGGCAGGGTTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPWSSTG*VAGFSS
Trigger: GCTTGAAAACCCTGCCACCCACCCTGTGCTTGACCA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTATCTTAGAAAGGCCTaGACTGGGTCCTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSYLRKA*TGSSPI
Trigger: GATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAGCCATCCGACCTCGTaGTCTTCAAACTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSHPTS*SSNLAS
Trigger: GCTGGCTAAGTTTGAAGATCACGAGGTCGGATGGCT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTACCGCAGCCTCTTTCTaGGGCAAGAACCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPTAASF*GKNLES
Trigger: ACTTTCCAGGTTCTTGCCTCAGAAAGAGGCTGCGGT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCTAGGGCAGTATTGTaGGAGGGACCTGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPARAVL*EGPGVS
Trigger: TGATACTCCAGGTCCCTCTCACAATACTGCCCTAGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGACCTGGAGTATCATTaGCTGAAAGTCCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSDLEYH*LKVPRH
Trigger: ATGCCTTGGGACTTTCAGGCAATGATACTCCAGGTC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACCTGGCCCACGCTTGTaGCTCCCCCTGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERPGPRL*LPLQPL
Trigger: GAGCGGCTGCAGGGGGAGGCACAAGCGTGGGCCAGG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGCCTGCCTGTTCAGTaGTCCCGGGGTCCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGLPVQ*SRGPRD
Trigger: GTCCCGGGGACCCCGGGACCACTGAACAGGCAGGCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGAACAGCCTGGACAATaGGTATGGTCCCTCCTGATC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPEQPGQ*VWSLLI
Trigger: GATCAGGAGGGACCATACCCATTGTCCAGGCTGTTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSETMV*GFLLLG
Trigger: CCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGAGAGGGATCTAATCTaGCCAGCTCCTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPERDLI*PAPEPA
Trigger: AGCTGGTTCAGGAGCTGGCCAGATTAGATCCCTCTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGAACTGATAGGACCCTaGCTCAAAAGTACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRELIGP*LKSTGS
Trigger: GCTGCCAGTACTTTTGAGCCAGGGTCCTATCAGTTC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGAGCCGCTTGGCGCCTaGCCCACGCTTGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGEREPLGA*PTLVPP
Trigger: GGGAGGCACAAGCGTGGGCCAGGCGCCAAGCGGCTC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCTGGCCGTTCTGTTaGCTTCTCCATGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSWPFC*LLHVIF
Trigger: AAAGATCACATGGAGAAGCCAACAGAACGGCCAGGA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTACCCTGAGACCTCCTaGAACGCTGAGAATGTACCC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPYPETS*NAENVP
Trigger: GGGTACATTCTCAGCGTTCCAGGAGGTCTCAGGGTA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCATCCCCCAGATTTTaGCAGAGTCACCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPASPRF*QSHLGI
Trigger: GATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCTGGGTGAGGCCACATaGGAACACTTTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLGEAT*EHFGEV
Trigger: TACTTCTCCAAAGTGTTCTCATGTGGCCTCACCCAG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAAGCAGCGGGGTGGCCTaGCTGTTCAGTGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSSGVA*LFSGPG
Trigger: CCCGGGACCACTGAACAGGCAGGCCACCCCGCTGCT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCAGCTCCACTTTCTTaGCCTGGATGCTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPAPLS*PGCCCL
Trigger: CAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCTTGTGCCTCCCCCTaGAGCCGCTCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERACASP*SRSCSV
Trigger: CACGGAGCAGGAGCGGCTGCAGGGGGAGGCACAAGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGCGCTCGTCCAGGTTaGGCTGCTGGGCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERCARPG*AAGPGR
Trigger: CCGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCTTTGCACCTTAAGTaGTCCTCTGTCTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRALHLK*SSVFSP
Trigger: AGGAGAGAAGACAGAGGAGCACTTAAGGTGCAAAGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACACCACTTCCGCTGCTaGTTGGCGAGGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERHHFRC*LARGPR
Trigger: CCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSETMV*GFLLLG
Trigger: CCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTTTGGTCTGAAACAATaGTCTGGGGGTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRFGLKQ*SGGFCS
Trigger: GGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTGTGGCTTGTGGGCCTaGAAATACCTACAGAACCAT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRCGLWA*KYLQNH
Trigger: ATGGTTCTGTAGGTATTTCCAGGCCCACAAGCCACA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGAACTGATAGGACCCTaGCTCAAAAGTACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPELIGP*LKSTGS
Trigger: GCTGCCAGTACTTTTGAGCCAGGGTCCTATCAGTTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGCGCAGATGAGTGCTaGGGCTGGGTGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERCADEC*GWVAAW
Trigger: CCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCTGGAAAGTTTGGTCTaGAACAATGGTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLESLV*NNGLGV
Trigger: AACCCCCAGACCATTGTTTCAGACCAAACTTTCCAG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCGTCCAGTTGGTCCTaGAGGAGGCGGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERASSWS*RRRMRS
Trigger: CGAGCGCATCCGCCTCCTTCAGGACCAACTGGACGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCGTTGGCTTCTCCATGTaGTCTTTCCCTGATAAACAA +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSVGFSM*SFPDKQ
Trigger: TTGTTTATCAGGGAAAGATCACATGGAGAAGCCAAC...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGACCTGGAGTATCATTaGCTGAAAGTCCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPDLEYH*LKVPRH
Trigger: ATGCCTTGGGACTTTCAGGCAATGATACTCCAGGTC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAACAGGCCTGGCGCACTaGAGCCTCCAGAGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERTGLAH*SLQSRL
Trigger: CAAGCGGCTCTGGAGGCTGCAGTGCGCCAGGCCTGT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATTGGCGTCCTCCTCCTaGCGCTGCAGGAGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLASSS*RCRSRS
Trigger: ACTCCGGCTCCTGCAGCGGCAGGAGGAGGACGCCAA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCGCCCAGGCTGGAGTaGAGTGGCGCGATGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSPRLE*SGAMSA
Trigger: AGCGGACATCGCGCCACTGCACTCCAGCCTGGGCGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACTGAGGCTGGGTGGCTaGGTGGGTCACTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLRLGG*VGHFPS
Trigger: GGAGGGGAAGTGACCCACGCAGCCACCCAGCCTCAG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCTTTGCACCTTAAGTaGTCCTCTGTCTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPALHLK*SSVFSP
Trigger: AGGAGAGAAGACAGAGGAGCACTTAAGGTGCAAAGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAAAAATAGGCTGCTTTaGACCTTAAGTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSKNRLL*TLSAPL
Trigger: CAGAGGAGCACTTAAGGTGCAAAGCAGCCTATTTTT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACGGAGCTCCTTGCGCTaGAACGACGTCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERRSSLR*NDVSRS
Trigger: GCTCCGGGAGACGTCGTTCCAGCGCAAGGAGCTCCG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCAGAACCTGGAAAGTTTaGTCTGAAACAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSRTWKV*SETMVW
Trigger: CCAGACCATTGTTTCAGACCAAACTTTCCAGGTTCT...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGCCCCTGGGAGGCATaGGGGTCTGGTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGPWEA*GSGGDL
Trigger: GAGATCACCACCAGACCCCCATGCCTCCCAGGGGCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCATAATACACAAGACCTaGGTGAGGCCACATGAGAAC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRIIHKT*VRPHEN
Trigger: GTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTAT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCCGACTGGCGGGCCTaGAGGCATCACCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSDWRA*RHHRAS
Trigger: TGAAGCTCGGTGATGCCTTCAGGCCCGCCAGTCGGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGCCAAGGTCGTCCCTaGTGGCGTCCAGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGQGRP*WRPVGP
Trigger: AGGACCAACTGGACGCCATCAGGGACGACCTTGGCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGTTGGCTTCTCCATGTaGTCTTTCCCAAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRVGFSM*SFPKIS
Trigger: GCTAATTTTTGGGAAAGATCACATGGAGAAGCCAAC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378679.8
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAAAGCACCACTTCCGCTaGTGGTTGGCGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERKHHFR*WLARGP
Trigger: GGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACCTGAAGGAGGCGGATaGGCTCGTCCAGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERPEGGG*ARPGCA
Trigger: AGCGCAACCTGGACGAGCGCATCCGCCTCCTTCAGG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAAGTGCTGAGGCTGGGTaGCTGCGTGGGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSAEAG*LRGSWE
Trigger: TTCCCAGGACCCACGCAGCCACCCAGCCTCAGCACT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACGTACAGCAGCGGGGTaGCCTGCCTGTTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERRTAAG*PACSVV
Trigger: GACCACTGAACAGGCAGGCCACCCCGCTGCTGTACG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTCTGAGGCAAGAACCTaGAAAGTTTGGTCTGAAACA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSEART*KVWSET
Trigger: TGTTTCAGACCAAACTTTCCAGGTTCTTGCCTCAGA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAACCCAAGACTTCGCCTaGAGCGCTCCGACTCCGACT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERTQDFA*SAPTPT
Trigger: AGTCGGAGTCGGAGCGCTTCAGGCGAAGTCTTGGGT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGGTATGGTCCCTCCTaGTCCTCCCCAGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGYGPS*SSPGTQ
Trigger: TTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCGCGCATGGACAGATaGCACAGGTCCAGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERARMDR*HRSRLL
Trigger: TAGCAGCCTGGACCTGTGGCATCTGTCCATGCGCGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCATGCGGAGCTCCTTaGGCTGGAACGACGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSCGAP*AGTTSP
Trigger: GGGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAAACCAGGCTGGCCAGTaGCCCTGGCTAGGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERNQAGQ*PWLGQY
Trigger: ATACTGCCCTAGCCAGGGGCACTGGCCAGCCTGGTT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCGATGTCCGCTCACTaGAAGCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERAMSAH*KLHLPG
Trigger: ACCTGGGAGGTGGAGCTTGCAGTGAGCGGACATCGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAAAAATAGGCTGCTTTaGACCTTAAGTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPKNRLL*TLSAPL
Trigger: CAGAGGAGCACTTAAGGTGCAAAGCAGCCTATTTTT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGCTGGGTGGCTGCGTaGGTCCTGGGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGWVAA*VLGKHR
Trigger: TCTGTGTTTTCCCAGGACCCACGCAGCCACCCAGCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCCCGGGACCTCTGTTaGCTGCGGCCCACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPRDLC*LRPTAG
Trigger: GCCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAGAACCTGGAAAGTTTaGTCTGAAACAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPRTWKV*SETMVW
Trigger: CCAGACCATTGTTTCAGACCAAACTTTCCAGGTTCT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGCTCTGGGCTGGGCTaGGAAGCAAGAGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGSGLG*EARGSH
Trigger: ATGTGACCCTCTTGCTTCCCAGCCCAGCCCAGAGCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGGTCTGGGGGTTTCTaGTCCTTGGGGAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERWSGGF*SLGNSL
Trigger: CAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACACTGTCAGCAGGGCTaGTCTGGGGTAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERHCQQG*SGVTLQ
Trigger: CTGCAGAGTTACCCCAGAGCAGCCCTGCTGACAGTG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGAACCATTCACCCCCTaGCAGCAGTCATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGEREPFTP*QQSSAP
Trigger: AGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCGTCCAGGTTGCGCTaGTGGGCCAGGACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSSRLR*WARTAA
Trigger: GGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGACGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACTGCCAGGCTCCCCTTaGCCACACAAGCAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLPGSP*PHKQPL
Trigger: TAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACGGAGTCCAGGTTCATaGAGCCTTGGGGTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERRSPGS*SLGVAS
Trigger: AGACGCAACCCCAAGGCTCCATGAACCTGGACTCCG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGTCCCAGTGGGGGTGTaGCTTGTGGGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERVPVGV*LVGLEI
Trigger: TATTTCCAGGCCCACAAGCCACACCCCCACTGGGAC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACACTCTCTGCAGCTGTaGGGGGATTGGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERHSLQL*GDWWSV
Trigger: GACTGACCACCAATCCCCCCACAGCTGCAGAGAGTG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGAGCCGCTTGGCGCCTaGCCCACGCTTGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLEPLGA*PTLVPP
Trigger: GGGAGGCACAAGCGTGGGCCAGGCGCCAAGCGGCTC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAACCCAGGCTGCTTCCTaGCCGTTCTGTTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERTQAAS*PFCWLL
Trigger: GAGAAGCCAACAGAACGGCCAGGAAGCAGCCTGGGT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCAGTCATCTGCCCCTaGAGTTCCTGGACACTCATG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERAVICP*SSWTLM
Trigger: CATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGCCAGCGCCGGATGCTaGAACTCCAAGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLASAGC*NSKGSG
Trigger: GCCCGAGCCCTTGGAGTTCCAGCATCCGGCGCTGGC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACCAGTTCCATACGGCTaGTCAGAGGCATGGACACTG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERPVPYG*SEAWTL
Trigger: CAGTGTCCATGCCTCTGACCAGCCGTATGGAACTGG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGGGGGTGTGGCTTGTaGGCCTGGAAATACCTACAG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERWGCGL*AWKYLQ
Trigger: CTGTAGGTATTTCCAGGCCCACAAGCCACACCCCCA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGGTCAAGCACAGGGTaGGTGGCAGGGTTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERWSSTG*VAGFSS
Trigger: GCTTGAAAACCCTGCCACCCACCCTGTGCTTGACCA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAATCACCCCACTTACGTaGGTGAGAGATAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERITPLT*VRDRGG
Trigger: ACCGCCCCTATCTCTCACCCACGTAAGTGGGGTGAT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACTCAGGGGAAGGAATTaGGACCAGCTCATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLRGRN*DQLIPC
Trigger: GCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAAGCCATCCGACCTCGTaGTCTTCAAACTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSHPTS*SSNLAS
Trigger: GCTGGCTAAGTTTGAAGATCACGAGGTCGGATGGCT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAACCGCAGCCTCTTTCTaGGGCAAGAACCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERTAASF*GKNLES
Trigger: ACTTTCCAGGTTCTTGCCTCAGAAAGAGGCTGCGGT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACACAATGCAGGTCTCTaGGACCCTCTGTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERHNAGL*DPLFTV
Trigger: GACAGTGAACAGAGGGTCTCAGAGACCTGCATTGTG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGTGGTGATCTCATTCTaGCCAGTGGGGCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERVVISF*PVGPLL
Trigger: TAGAAGAGGCCCCACTGGTCAGAATGAGATCACCAC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCTGGGAGACGGGGCATaGTGGCCAAGGTCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLGDGA*WPRSSL
Trigger: CAGGGACGACCTTGGCCATCATGCCCCGTCTCCCAG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGACCTCCTGGAACGCTaGGAATGTACCCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERDLLER*ECTHVP
Trigger: AGGAACATGGGTACATTCTCAGCGTTCCAGGAGGTC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCCAGGGAGCACCTCTaGAGGTTGAGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPREHL*RLRAQL
Trigger: GAGCTGGGCCCTCAACCTTCAGAGGTGCTCCCTGGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTTGGCGTCCTCCTCCTaGCGCTGCAGGAGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLASSS*RCRSRS
Trigger: ACTCCGGCTCCTGCAGCGGCAGGAGGAGGACGCCAA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCGCCCAGGCTGGAGTaGAGTGGCGCGATGTCCGCT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSPRLE*SGAMSA
Trigger: AGCGGACATCGCGCCACTGCACTCCAGCCTGGGCGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCTGAGGCTGGGTGGCTaGGTGGGTCACTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLRLGG*VGHFPS
Trigger: GGAGGGGAAGTGACCCACGCAGCCACCCAGCCTCAG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGAACAGCCTGGACAATaGGTATGGTCCCTCCTGATC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGEREQPGQ*VWSLLI
Trigger: GATCAGGAGGGACCATACCCATTGTCCAGGCTGTTC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGGCCCCTGGGAGGCATaGGGGTCTGGTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLGPWEA*GSGGDL
Trigger: GAGATCACCACCAGACCCCCATGCCTCCCAGGGGCC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGAGAGGGAAGGGCGGCTaGACTGGAGGACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLRGKGG*TGGQVP
Trigger: AGGGACCTGTCCTCCAGTTCAGCCGCCCTTCCCTCT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGGGATGTTATCATTTaGAGTCCCAGTGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERWDVII*SPSGGV
Trigger: CACACCCCCACTGGGACTGCAAATGATAACATCCCA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACTTTCTTGCCCTGGATaGTGTTGTTTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLSCPG*CCLVQG
Trigger: TCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACCAGCTCCACTTTCTTaGCCTGGATGCTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERPAPLS*PGCCCL
Trigger: CAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCTGAAGGAGGCGGATaGGCTCGTCCAGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPEGGG*ARPGCA
Trigger: AGCGCAACCTGGACGAGCGCATCCGCCTCCTTCAGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGACCAGCTCATTCCCTaGCAGGCTCCCCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLDQLIP*QAPLAH
Trigger: GTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCGAGTCCGCGCGCATaGACAGATGCCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPSPRA*TDATGP
Trigger: TGGACCTGTGGCATCTGTCCATGCGCGCGGACTCGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSETMV*GFLLLG
Trigger: CCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGAACTGATAGGACCCTaGCTCAAAAGTACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERELIGP*LKSTGS
Trigger: GCTGCCAGTACTTTTGAGCCAGGGTCCTATCAGTTC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGACCCAAGACTTCGCCTaGAGCGCTCCGACTCCGACT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLTQDFA*SAPTPT
Trigger: AGTCGGAGTCGGAGCGCTTCAGGCGAAGTCTTGGGT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACTGGAAAGTTTGGTCTaGAACAATGGTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLESLV*NNGLGV
Trigger: AACCCCCAGACCATTGTTTCAGACCAAACTTTCCAG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGACCTGGAGTATCATTaGCTGAAAGTCCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERDLEYH*LKVPRH
Trigger: ATGCCTTGGGACTTTCAGGCAATGATACTCCAGGTC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGAGGTTCATGGAGCCTTaGGGTTGCGTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLRFMEP*GCVSGS
Trigger: GCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATTTGGTCTGAAACAATaGTCTGGGGGTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERFGLKQ*SGGFCS
Trigger: GGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATGTGGCTTGTGGGCCTaGAAATACCTACAGAACCAT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERCGLWA*KYLQNH
Trigger: ATGGTTCTGTAGGTATTTCCAGGCCCACAAGCCACA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCCACTTTCTTGCCCTaGATGCTGTTGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSTFLP*MLLFGA
Trigger: TGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCTGCCAGCAGTCATCTaGCCCTGCAGTTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLPAVI*PCSSWT
Trigger: TGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCTGGACAATGGGTATaGTCCCTCCTGATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPGQWV*SLLILP
Trigger: GGGGAGGATCAGGAGGGACCATACCCATTGTCCAGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTGCCCCTGCAGTTCCTaGACACTCATGGAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLCPCSS*TLMERV
Trigger: TACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCACCGTCACAAGCGCTaGCATCCCCCAGATTTTGGC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLHRHKR*HPPDFG
Trigger: GCCAAAATCTGGGGGATGCCAGCGCTTGTGACGGTG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCTGAGGCAAGAACCTaGAAAGTTTGGTCTGAAACA +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSEART*KVWSET
Trigger: TGTTTCAGACCAAACTTTCCAGGTTCTTGCCTCAGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCTGGCTCAAAAGTACTaGCAGCCTCCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLAQKY*QPPLQP
Trigger: AGGCTGGAGAGGAGGCTGCCAGTACTTTTGAGCCAG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTGGTCAAGCACAGGGTaGGTGGCAGGGTTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLWSSTG*VAGFSS
Trigger: GCTTGAAAACCCTGCCACCCACCCTGTGCTTGACCA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTTGGCAGAGTCACCTTaGGATCAGAGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLAESP*DQRWQR
Trigger: CCTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGTGGTGATCTCATTCTaGCCAGTGGGGCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLVVISF*PVGPLL
Trigger: TAGAAGAGGCCCCACTGGTCAGAATGAGATCACCAC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGACCTCCTGGAACGCTaGGAATGTACCCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLDLLER*ECTHVP
Trigger: AGGAACATGGGTACATTCTCAGCGTTCCAGGAGGTC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTACCCTGAGACCTCCTaGAACGCTGAGAATGTACCC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLYPETS*NAENVP
Trigger: GGGTACATTCTCAGCGTTCCAGGAGGTCTCAGGGTA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGCATCCCCCAGATTTTaGCAGAGTCACCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLASPRF*QSHLGI
Trigger: GATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR TCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTGGAGTATCATTGCCTaGAAGTCCCAAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLWSIIA*KSQGIS
Trigger: GCTGATGCCTTGGGACTTTCAGGCAATGATACTCCA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR GCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCTTTCTTGCCCTGGATaGTGTTGTTTGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLLSCPG*CCLVQG
Trigger: TCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAACTCTCATCACAAAATaGGGGAATACTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SREKQRLNQHHPTYVGERTLITK*GNTAVF
Trigger: AAAAACTGCAGTATTCCCCCATTTTGTGATGAGAGT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTTTGGTCTGAAACAATaGTCTGGGGGTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLFGLKQ*SGGFCS
Trigger: GGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCCACTTTCTTGCCCTaGATGCTGTTGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSTFLP*MLLFGA
Trigger: TGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCCTGGCCGTTCTGTTaGCTTCTCCATGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSWPFC*LLHVIF
Trigger: AAAGATCACATGGAGAAGCCAACAGAACGGCCAGGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGATAATACACAAGACCTaGGTGAGGCCACATGAGAAC +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLIIHKT*VRPHEN
Trigger: GTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTAT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCTGAGGCAAGAACCTaGAAAGTTTGGTCTGAAACA +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSEART*KVWSET
Trigger: TGTTTCAGACCAAACTTTCCAGGTTCTTGCCTCAGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CCA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGACTCTCATCACAAAATaGGGGAATACTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: INYQIIHKTWVRPHENTLTLITK*GNTAVF
Trigger: AAAAACTGCAGTATTCCCCCATTTTGTGATGAGAGT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp CTGAGGCCGCCCGGGCCAGGGCGCGGCGCACGCGCGCCAGGCGACTaGCCAGCAGCAGCAGAAGGCCAAGCACGCGCTCTAGGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: LRPPGPGRGARAPGD*PAAAEGQARALGRP
Trigger: TGGCCGACCTAGAGCGCGTGCTTGGCCTTCTGCTGCTGCTGGGCAGTCGCCTGGCGCGCGTGCGCCGCGCCCTGGCCCGGGCGGCCTCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp GGGGCCGCGCTGGGACAGTGGGCCGCAGACGGGCGGGCAGGCTCATaGGGAGCTCCTTGCGCTGGAACGACGTCTCCCGGAGCACTCGCC +
Preference number: 5 (lower is better)
Translates to: GAALGQWAADGRAGS*GAPCAGTTSPGALA
Trigger: GGCGAGTGCTCCGGGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGAGCCTGCCCGCCCGTCTGCGGCCCACTGTCCCAGCGCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 90 bp GGACAGTGGGCCGCAGACGGGCGGGCAGGCTCATGCGGAGCTCCTTaGGCTGGAACGACGTCTCCCGGAGCACTCGCCGCTGCGCGCCCT +
Preference number: 5 (lower is better)
Translates to: GQWAADGRAGSCGAP*AGTTSPGALAAARP
Trigger: AGGGCGCGCAGCGGCGAGTGCTCCGGGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGAGCCTGCCCGCCCGTCTGCGGCCCACTGTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS TCA 90 bp GTCGCCCCCAGGTCCCAGGGCCTCCATGGCTGCGCAGATGAGTGCTaGGGCTGGGTGGCTGCGTGGGTCCTGAGGCTCCCGCCGAGACGC +
Preference number: 5 (lower is better)
Translates to: VAPRSQGLHGCADEC*GWVAAWVLRLPPRR
Trigger: GCGTCTCGGCGGGAGCCTCAGGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCATGGAGGCCCTGGGACCTGGGGGCGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440118.1
CDS GCA 90 bp GTCTGTCCCCGGCGACTGCGTGCGCGGCTCGGGGCCGCCGGAGGCTaGGGAGAAAGAGCTGTAGGCCGAGTCCGCGCGCATGGACAGATG +
Preference number: 5 (lower is better)
Translates to: VCPRRLRARLGAAGG*GERAVGRVRAHGQM
Trigger: CATCTGTCCATGCGCGCGGACTCGGCCTACAGCTCTTTCTCCGCAGCCTCCGGCGGCCCCGAGCCGCGCACGCAGTCGCCGGGGACAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 90 bp CCGGCTGAACCGCTCCAGCTCCTGAGGGGCACAGGCCTGGCGCACTaGAGCCTCCAGAGCCGCTTGGCGCCTGGCCCACGCTTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PAEPLQLLRGTGLAH*SLQSRLAPGPRLCL
Trigger: GAGGCACAAGCGTGGGCCAGGCGCCAAGCGGCTCTGGAGGCTGCAGTGCGCCAGGCCTGTGCCCCTCAGGAGCTGGAGCGGTTCAGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS GCA 90 bp TGGCGTCCAGTTGGTCCTGAAGGAGGCGGATGCGCTCGTCCAGGTTaGGCTGCTGGGCCAGGACGGCGGCCTTGCCCGCCAGCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: WRPVGPEGGGCARPG*AAGPGRRPCPPAGR
Trigger: GCGCCCTGCTGGCGGGCAAGGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCATCCGCCTCCTTCAGGACCAACTGGACGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp GGATGCGCTCGTCCAGGTTGCGCTGCTGGGCCAGGACGGCGGCCTTaGCCGCCAGCAGGGCGCAATAGACGCGCAGCTCCTCCACCGGTA +
Preference number: 5 (lower is better)
Translates to: GCARPGCAAGPGRRP*PPAGRNRRAAPPPV
Trigger: TACCGGTGGAGGAGCTGCGCGTCTATTGCGCCCTGCTGGCGGGCAAGGCCGCCGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp GCGCACTGCAGCCTCCAGAGCCGCTTGGCGCCTGGCCCACGCTTGTaGCTCCCCCTGCAGCCGCTCCTGCTCCGTGTGAAGGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: AHCSLQSRLAPGPRL*LPLQPLLLRVKVLK
Trigger: CTTCAGGACCTTCACACGGAGCAGGAGCGGCTGCAGGGGGAGGCACAAGCGTGGGCCAGGCGCCAAGCGGCTCTGGAGGCTGCAGTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CCA 90 bp GATCCAGCTTTCCTGGCTCTGAGAAGCACCACTTCCGCTGCTGGTTaGCGAGGGGACCCCGGCCGGCAGTTCCTGGCGCGGGAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: DPAFLALRSTTSAAG*RGDPGRQFLAREPG
Trigger: CCCGGGCTCCCGCGCCAGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTGGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS TCA 90 bp GCCGCGCCGGGCTGGGAGACGGGGCATGATGGCCAAGGTCGTCCCTaGTGGCGTCCAGTTGGTCCTGAAGGAGGCGGATGCGCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: AAPGWETGHDGQGRP*WRPVGPEGGGCARP
Trigger: TGGACGAGCGCATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGGGACGACCTTGGCCATCATGCCCCGTCTCCCAGCCCGGCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS TCA 90 bp GTCGCCCCCAGGTCCCAGGGCCTCCATGGCTGCGCAGATGAGTGCTaGGGCTGGGTGGCTGCGTGGGTCACTTCCCCTCCCTGGTCACAC +
Preference number: 5 (lower is better)
Translates to: VAPRSQGLHGCADEC*GWVAAWVTSPPWSH
Trigger: GTGTGACCAGGGAGGGGAAGTGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCATGGAGGCCCTGGGACCTGGGGGCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCGGGACCTCTGTaGGCTGCGGCCCACTGCGGG +
Preference number: 5 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSPGPL*AAAHCG
Trigger: CCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGGA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCCAGGACGGCGGCCTaGCCCGCCAGCAGGGCGCAA +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRARTAA*PASRAQ
Trigger: TTGCGCCCTGCTGGCGGGCAAGGCCGCCGTCCTGGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp AGTCCCAGTCTAGGTAAGGAAGGAGGTCTGTCCCCGGCGACTGCGTaGGCGGCTCGGGGCCGCCGGAGGCTGCGGAGAAAGAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: SPSLGKEGGLSPATA*AARGRRRLRRKSCR
Trigger: CCTACAGCTCTTTCTCCGCAGCCTCCGGCGGCCCCGAGCCGCGCACGCAGTCGCCGGGGACAGACCTCCTTCCTTACCTAGACTGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 90 bp CCCACACGATCCAGCTTTCCTGGCTCTGAGAAGCACCACTTCCGCTaGTGGTTGGCGAGGGGACCCCGGCCGGCAGTTCCTGGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: PTRSSFPGSEKHHFR*WLARGPRPAVPGAG
Trigger: TCCCGCGCCAGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTGGATCGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CCA 90 bp ACACGATCCAGCTTTCCTGGCTCTGAGAAGCACCACTTCCGCTGCTaGTTGGCGAGGGGACCCCGGCCGGCAGTTCCTGGCGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TRSSFPGSEKHHFRC*LARGPRPAVPGAGA
Trigger: GGCTCCCGCGCCAGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTGGATCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CCA 90 bp TGTAAGGAGAAGAGGGAAGGGCGGCTGAACTGGAGGACAGGTCCCTaGGGGCCGCGCCGGGCTGGGAGACGGGGCATGATGGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CKEKREGRLNWRTGP*GPRRAGRRGMMAKV
Trigger: GACCTTGGCCATCATGCCCCGTCTCCCAGCCCGGCGCGGCCCCCAGGGACCTGTCCTCCAGTTCAGCCGCCCTTCCCTCTTCTCCTTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCCAGGACGGCGGCCTaGCCCGCCAGCAGGGCGCAA +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPARTAA*PASRAQ
Trigger: TTGCGCCCTGCTGGCGGGCAAGGCCGCCGTCCTGGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCACTTCCGCTGCTGGTaGGCGAGGGGACCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPHFRCW*ARGPRP
Trigger: CGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCAGCCTCCAGAGCCGCTaGGCGCCTGGCCCACGCTTG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRSLQSR*APGPRL
Trigger: CAAGCGTGGGCCAGGCGCCAAGCGGCTCTGGAGGCT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS TCA 90 bp GTCGCCCCCAGGTCCCAGGGCCTCCATGGCTGCGCAGATGAGTGCTaGGGCTGGGTGGCTGCGTGGGTCCTGGGAAAACACAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: VAPRSQGLHGCADEC*GWVAAWVLGKHRCG
Trigger: ACCACATCTGTGTTTTCCCAGGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCATGGAGGCCCTGGGACCTGGGGGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS CCA 90 bp GGTCCCAGGGCCTCCATGGCTGCGCAGATGAGTGCTGAGGCTGGGTaGCTGCGTGGGTCCTGGGAAAACACAGATGTGGTGCCGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GPRASMAAQMSAEAG*LRGSWENTDVVPGE
Trigger: CTCACCCGGCACCACATCTGTGTTTTCCCAGGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCATGGAGGCCCTGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS CCA 90 bp GTGCAGGGAGCCCCTGCCCACATGGCTGGTCAAGCACAGGGTGGGTaGCAGGGTTTTCAAGCCTTGTCTCCTCCCGAGGAGCCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: VQGAPAHMAGQAQGG*QGFQALSPPEEPAG
Trigger: TCCTGCCGGCTCCTCGGGAGGAGACAAGGCTTGAAAACCCTGCCACCCACCCTGTGCTTGACCAGCCATGTGGGCAGGGGCTCCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTAGCCTCCAGAGCCGCTaGGCGCCTGGCCCACGCTTG +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSLQSR*APGPRL
Trigger: CAAGCGTGGGCCAGGCGCCAAGCGGCTCTGGAGGCT...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCATGCGCTCGTCCAGGTaGCGCTGCTGGGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRMRSSR*RCWART
Trigger: CGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCAT...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp ATGGCTGCGCAGATGAGTGCTGAGGCTGGGTGGCTGCGTGGGTCCTaGGAAAACACAGATGTGGTGCCGGGTGAGGAGCTCCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: MAAQMSAEAGWLRGS*ENTDVVPGEELRVR
Trigger: CCTCACCCGGAGCTCCTCACCCGGCACCACATCTGTGTTTTCCCAGGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS CCA 90 bp TTTGGTGCAGGGAGCCCCTGCCCACATGGCTGGTCAAGCACAGGGTaGGTGGCAGGGTTTTCAAGCCTTGTCTCCTCCCGAGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: FGAGSPCPHGWSSTG*VAGFSSLVSSRGAG
Trigger: GCCGGCTCCTCGGGAGGAGACAAGGCTTGAAAACCCTGCCACCCACCCTGTGCTTGACCAGCCATGTGGGCAGGGGCTCCCTGCACCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CCA 90 bp GAGGCGGGCGGCCAGCTCCACTTTCTTGCCCTGGATGCTGTTGTTTaGTGCAGGGAGCCCCTGCCCACATGGCTGGTCAAGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: EAGGQLHFLALDAVV*CREPLPTWLVKHRV
Trigger: CACCCTGTGCTTGACCAGCCATGTGGGCAGGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGGCCGCCCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCATGGAGCCTTGGGGTaGCGTCTCGGGCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRHGALG*RLGQPS
Trigger: GGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCACAGGCAGGCCGCATaGCAGCCCGGACCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRHRQAA*QPGPLL
Trigger: TAGCAGAGGTCCGGGCTGCAATGCGGCCTGCCTGTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCTGCCAGGCTCCCCTaGCCCACACAAGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPARLP*PTQAAF
Trigger: AAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCTCATGCGGAGCTCCTaGCGCTGGAACGACGTCTCC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLMRSS*RWNDVS
Trigger: GGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGAG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCATGGAGCCTTGGGGTaGCGTCTCGGGCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPHGALG*RLGQPS
Trigger: GGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCACAGGCAGGCCGCATaGCAGCCCGGACCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPHRQAA*QPGPLL
Trigger: TAGCAGAGGTCCGGGCTGCAATGCGGCCTGCCTGTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTTGCCCTGGATGCTGTaGTTTGGTGCAGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSLPWML*FGAGSP
Trigger: GGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGTCCTGAAGCATCTTTaGGAGGCGGGCGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRVLKHL*EAGGQL
Trigger: GAGCTGGCCGCCCGCCTCCAAAAGATGCTTCAGGAC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCCCTGATGGCGTCCAGTaGGTCCTGAAGGAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSPDGVQ*VLKEAD
Trigger: ATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGG...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS TCA 90 bp AACCCAAGACTTCGCCTGAAGCGCTCCGACTCCGACTGGCGGGCCTaGAGGCATCACCGAGCTTCAAGGACCCGGAGTCCAGGTTCATGG +
Preference number: 5 (lower is better)
Translates to: NPRLRLKRSDSDWRA*RHHRASRTRSPGSW
Trigger: CCATGAACCTGGACTCCGGGTCCTTGAAGCTCGGTGATGCCTTCAGGCCCGCCAGTCGGAGTCGGAGCGCTTCAGGCGAAGTCTTGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCAGGTTCATGGAGCCTaGGGGTTGCGTCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPQVHGA*GLRLGQ
Trigger: CTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCCAGGGTTTTCAAGCCTaGTCTCCTCCCGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRQGFQA*SPPEEP
Trigger: CGGCTCCTCGGGAGGAGACAAGGCTTGAAAACCCTG...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTTGCCCTGGATGCTGTaGTTTGGTGCAGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLPWML*FGAGSP
Trigger: GGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGTCCTGAAGCATCTTTaGGAGGCGGGCGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPVLKHL*EAGGQL
Trigger: GAGCTGGCCGCCCGCCTCCAAAAGATGCTTCAGGAC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCCTGCCAGGCTCCCCTaGCCCACACAAGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPPARLP*PTQAAF
Trigger: AAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAGG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp TTGAGGGCCCAGCTCAGGGGAAGGAATTGGGACCAGCTCATTCCCTaGCAGGCTCCCCTTGCCCACACAAGCAGCCTTTACCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: LRAQLRGRNWDQLIP*QAPLAHTSSLYPET
Trigger: GGTCTCAGGGTAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGCTGGGCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGGGGGTTTCTGCTCCTaGGGGAACAGCCTGGACAAT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRGGFCS*GNSLDN
Trigger: ATTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCAGCTGGGACAGGTTaGAGGAGGTCACTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSSAGTG*RRSLSA
Trigger: TGCAGAGAGTGACCTCCTCAAACCTGTCCCAGCTGA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTCAGGGTTTTCAAGCCTaGTCTCCTCCCGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPQGFQA*SPPEEP
Trigger: CGGCTCCTCGGGAGGAGACAAGGCTTGAAAACCCTG...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTTGCCCTGGATGCTGTaGTTTGGTGCAGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLPWML*FGAGSP
Trigger: GGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGCTCAGGGGAAGGAATaGGGACCAGCTCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRAQGKE*GPAHSL
Trigger: CAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GTGAGCCACCGCGCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTTTGGCAGAGTCACCTaGGGATCAGAGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: VSHRARLEEYLRKAWTGSFGRVT*GSEVAE
Trigger: CTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAAA...GGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGCGCGGTGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS TCA 90 bp TTCATGGAGCCTTGGGGTTGCGTCTCGGGCAGCCATCCGACCTCGTaGTCTTCAAACTTAGCCAGCGCCGGATGCTGGAACTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: FMEPWGCVSGSHPTS*SSNLASAGCWNSKG
Trigger: GCCCTTGGAGTTCCAGCATCCGGCGCTGGCTAAGTTTGAAGATCACGAGGTCGGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS TCA 90 bp GTGGCAGAGGAAGTAGGACCAGTCCCAGGGAGCACCTCTGAAGGTTaGGGGCCCAGCTCAGGGGAAGGAATTGGGACCAGCTCATTCCCT +
Preference number: 5 (lower is better)
Translates to: VAEEVGPVPGSTSEG*GPSSGEGIGTSSFP
Trigger: AGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGCTGGGCCCTCAACCTTCAGAGGTGCTCCCTGGGACTGGTCCTACTTCCTCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp GGTCACTCTCTGCAGAGAACCATTCACCCCCTGCCAGCAGTCATCTaGCCCTGCAGTTCCTGGACACTCATGGAGCGGGTACTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GHSLQRTIHPLPAVI*PCSSWTLMERVLCG
Trigger: CCCACAGAGTACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTCTCTGCAGAGAGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495680.2
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGCCAGGACGGCGGCCTaGCCCGCCAGCAGGGCGCAA +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERARTAA*PASRAQ
Trigger: TTGCGCCCTGCTGGCGGGCAAGGCCGCCGTCCTGGC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTGCTCAGGGGAAGGAATaGGGACCAGCTCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPAQGKE*GPAHSL
Trigger: CAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGC...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp GCTCCCCTCACCAGCCTGCATCTCCTGACTTCCATACCTGGACAATaGGTATGGTCCCTCCTGATCCTCCCCAGGAACCCAAGACTTCGC +
Preference number: 5 (lower is better)
Translates to: APLTSLHLLTSIPGQ*VWSLLILPRNPRLR
Trigger: GCGAAGTCTTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCCATTGTCCAGGTATGGAAGTCAGGAGATGCAGGCTGGTGAGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CCA 90 bp CCCAGATGCTCCCCTCACCAGCCTGCATCTCCTGACTTCCATACCTaGACAATGGGTATGGTCCCTCCTGATCCTCCCCAGGAACCCAAG +
Preference number: 5 (lower is better)
Translates to: PRCSPHQPASPDFHT*TMGMVPPDPPQEPK
Trigger: CTTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCCATTGTCCAGGTATGGAAGTCAGGAGATGCAGGCTGGTGAGGGGAGCATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATCCCCGGGACCTCTGTaGGCTGCGGCCCACTGCGGG +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERSPGPL*AAAHCG
Trigger: CCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGGA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACACTTCCGCTGCTGGTaGGCGAGGGGACCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERHFRCW*ARGPRP
Trigger: CGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTCAGCTGGGACAGGTTaGAGGAGGTCACTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPSAGTG*RRSLSA
Trigger: TGCAGAGAGTGACCTCCTCAAACCTGTCCCAGCTGA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCGGACCTGGAGTATCATaGCCTGAAAGTCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRGPGVS*PESPKA
Trigger: TGCCTTGGGACTTTCAGGCAATGATACTCCAGGTCC...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS GCA 90 bp CCTGGAAATACCTACAGAACCATTCACCCCCTGCCAGCAGTCATCTaGCCCTGCAGTTCCTGGACACTCATGGAGCGGGTACTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PGNTYRTIHPLPAVI*PCSSWTLMERVLCG
Trigger: CCCACAGAGTACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTCTGTAGGTATTTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp CAGGCTCCCCTTGCCCACACAAGCAGCCTTTACCCTGAGACCTCCTaGAACGCTGAGAATGTACCCATGTTCCTTTCCTCCCCAACCCTG +
Preference number: 5 (lower is better)
Translates to: QAPLAHTSSLYPETS*NAENVPMFLSSPTL
Trigger: CAGGGTTGGGGAGGAAAGGAACATGGGTACATTCTCAGCGTTCCAGGAGGTCTCAGGGTAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGCTGGCAATACAGGCACCCGCCACCACGCTTGGGATGTTATCATTaGCAGTCCCAGTGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWQYRHPPPRLGCYH*QSQWGC
Trigger: ACACCCCCACTGGGACTGCAAATGATAACATCCCAA...GCGTGGTGGCGGGTGCCTGTATTGCCAGCTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp TCATGGAGCGGGTACTCTGTGGGGACTGTAACCTGGCCAGTTCTTTaGCCTAAGCCAGTTCCATACGGCTGGTCAGAGGCATGGACACTG +
Preference number: 5 (lower is better)
Translates to: SWSGYSVGTVTWPVL*PKPVPYGWSEAWTL
Trigger: CAGTGTCCATGCCTCTGACCAGCCGTATGGAACTGGCTTAGGCCAAAGAACTGGCCAGGTTACAGTCCCCACAGAGTACCCGCTCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp CTCACCAGCCTGCATCTCCTGACTTCCATACCTGGACAATGGGTATaGTCCCTCCTGATCCTCCCCAGGAACCCAAGACTTCGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LTSLHLLTSIPGQWV*SLLILPRNPRLRLK
Trigger: CTTCAGGCGAAGTCTTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCCATTGTCCAGGTATGGAAGTCAGGAGATGCAGGCTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS-3UTR CAA 90 bp GCCCGGCTGGAGGAGTATCTTAGAAAGGCCTGGACTGGGTCCTCCCCAATCCCTTTGGGATGTTATCATTaGCAGTCCCAGTGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: ARLEEYLRKAWTGSSPIPLGCYH*QSQWGC
Trigger: ACACCCCCACTGGGACTGCAAATGATAACATCCCAA...AGGGATTGGGGAGGACCCAGTCCAGGCCTTTCTAAGATACTCCTCCAGCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAATGCGCTCGTCCAGGTaGCGCTGCTGGGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERMRSSR*RCWART
Trigger: CGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCAT...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS TCA 90 bp ACTTGGTCCAGAGTGGTCCGTGTCTCTCACCTGGAAAGTTTGGTCTaGAACAATGGTCTGGGGGTTTCTGCTCCTTGGGGAACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TWSRVVRVSHLESLV*NNGLGVSAPWGTAW
Trigger: CCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTGAGAGACACGGACCACTCTGGACCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CCA 90 bp GGATGTTATCATTTGCAGTCCCAGTGGGGGTGTGGCTTGTGGGCCTaGAAATACCTACAGAACCATTCACCCCCTGCCAGCAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: GCYHLQSQWGCGLWA*KYLQNHSPPASSHL
Trigger: CAGATGACTGCTGGCAGGGGGTGAATGGTTCTGTAGGTATTTCCAGGCCCACAAGCCACACCCCCACTGGGACTGCAAATGATAACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACTCATGCGGAGCTCCTaGCGCTGGAACGACGTCTCC +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLMRSS*RWNDVS
Trigger: GGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGAG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACAGGTTCATGGAGCCTaGGGGTTGCGTCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERQVHGA*GLRLGQ
Trigger: CTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGTCCTGAAGCATCTTTaGGAGGCGGGCGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERVLKHL*EAGGQL
Trigger: GAGCTGGCCGCCCGCCTCCAAAAGATGCTTCAGGAC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp GGGTCAATAGTTGGGATGTTATCATTTGCAGTCCCAGTGGGGGTGTaGCTTGTGGGCCTGGAAATACCTACAGAACCATTCACCCCCTGC +
Preference number: 5 (lower is better)
Translates to: GSIVGMLSFAVPVGV*LVGLEIPTEPFTPC
Trigger: GCAGGGGGTGAATGGTTCTGTAGGTATTTCCAGGCCCACAAGCCACACCCCCACTGGGACTGCAAATGATAACATCCCAACTATTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp GGTCAGAGGCATGGACACTGGAAAGTTTGGTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGGGAACAGCCTGGACAATGGGTATGG +
Preference number: 5 (lower is better)
Translates to: GQRHGHWKVWSETMV*GFLLLGEQPGQWVW
Trigger: CCATACCCATTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGTGTCCATGCCTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378676.1
CDS CCA 90 bp TGGTCCGTGTCTCTCACCTGGAAAGTTTGGTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGGGAACAGCCTGGAAGGGTGAACAGT +
Preference number: 5 (lower is better)
Translates to: WSVSLTWKVWSETMV*GFLLLGEQPGRVNS
Trigger: ACTGTTCACCCTTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTGAGAGACACGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCCCCGGGACCTCTGTaGGCTGCGGCCCACTGCGGG +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSPGPL*AAAHCG
Trigger: CCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGACCTGATGGCGTCCAGTaGGTCCTGAAGGAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERPDGVQ*VLKEAD
Trigger: ATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGG...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGGGGTTTCTGCTCCTaGGGGAACAGCCTGGACAAT +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGGFCS*GNSLDN
Trigger: ATTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CCA 90 bp CTTTCTGAGGCAAGAACCTGGAAAGTTTGGTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGGGAACAGCCTGGACAATGGGTATGG +
Preference number: 5 (lower is better)
Translates to: LSEARTWKVWSETMV*GFLLLGEQPGQWVW
Trigger: CCATACCCATTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTTCTTGCCTCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGATGCGCTCGTCCAGGTaGCGCTGCTGGGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLMRSSR*RCWART
Trigger: CGTCCTGGCCCAGCAGCGCAACCTGGACGAGCGCAT...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGCATCCCCCAGATTTaGGCAGAGTCACCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGIPQI*AESPWD
Trigger: ATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGAGGACCTGGAGTATCATaGCCTGAAAGTCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERGPGVS*PESPKA
Trigger: TGCCTTGGGACTTTCAGGCAATGATACTCCAGGTCC...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCACAGGCAGGCCGCATaGCAGCCCGGACCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLHRQAA*QPGPLL
Trigger: TAGCAGAGGTCCGGGCTGCAATGCGGCCTGCCTGTG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCAGGTTCATGGAGCCTaGGGGTTGCGTCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLQVHGA*GLRLGQ
Trigger: CTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp TCAAGGGAAAAGCAGAGACTAAATCAGCATCACCCCACTTACGTGGGTGAGAGATTGGGATGTTATCATTaGCAGTCCCAGTGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: SREKQRLNQHHPTYVGERLGCYH*QSQWGC
Trigger: ACACCCCCACTGGGACTGCAAATGATAACATCCCAA...TCTCTCACCCACGTAAGTGGGGTGATGCTGATTTAGTCTCTGCTTTTCCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCAGGGTTTTCAAGCCTaGTCTCCTCCCGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLQGFQA*SPPEEP
Trigger: CGGCTCCTCGGGAGGAGACAAGGCTTGAAAACCCTG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGCCTGATGGCGTCCAGTaGGTCCTGAAGGAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLPDGVQ*VLKEAD
Trigger: ATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGG...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTCAGCTGGGACAGGTTaGAGGAGGTCACTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLSAGTG*RRSLSA
Trigger: TGCAGAGAGTGACCTCCTCAAACCTGTCCCAGCTGA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGTTTGGCAGAGTCACCTaGGGATCAGAGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLFGRVT*GSEVAE
Trigger: CTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAAA...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGGCATCCCCCAGATTTaGGCAGAGTCACCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLGIPQI*AESPWD
Trigger: ATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGCC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS-3UTR CAA 90 bp ATTAATTACCAAATAATACACAAGACCTGGGTGAGGCCACATGAGAACACTTTGGGACCTGGAGTATCATaGCCTGAAAGTCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: INYQIIHKTWVRPHENTLGPGVS*PESPKA
Trigger: TGCCTTGGGACTTTCAGGCAATGATACTCCAGGTCC...CAAAGTGTTCTCATGTGGCCTCACCCAGGTCTTGTGTATTATTTGGTAATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 72 bp CCCGGGCCAGGGCGCGGCGCACGCGCGCCAGGCGACTaGCCAGCAGCAGCAGAAGGCCAAGCACGCGCTCTA +
Preference number: 6 (lower is better)
Translates to: PGPGRGARAPGD*PAAAEGQARAL
Trigger: TAGAGCGCGTGCTTGGCCTTCTGCTGCTGCTGGGCAGTCGCCTGGCGCGCGTGCGCCGCGCCCTGGCCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp CCTGTTCAGTGGTCCCGGGGTCCCCGGGACCTCTGTTaGCTGCGGCCCACTGCGGGCTGCAACCGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: PVQWSRGPRDLC*LRPTAGCNRGP
Trigger: CGGCCCGCGGTTGCAGCCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGGACCCCGGGACCACTGAACAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CAA 72 bp GCCTGTTCAGTGGTCCCGGGGTCCCCGGGACCTCTGTaGGCTGCGGCCCACTGCGGGCTGCAACCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: ACSVVPGSPGPL*AAAHCGLQPRA
Trigger: GGCCCGCGGTTGCAGCCCGCAGTGGGCCGCAGCCAACAGAGGTCCCGGGGACCCCGGGACCACTGAACAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CAA 90 bp GGGACAGTGGGCCGCAGACGGGCGGGCAGGCTCATGCGGAGCTCCTaGCGCTGGAACGACGTCTCCCGGAGCACTCGCCGCTGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: GTVGRRRAGRLMRSS*RWNDVSRSTRRCAP
Trigger: GGGCGCGCAGCGGCGAGTGCTCCGGGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGAGCCTGCCCGCCCGTCTGCGGCCCACTGTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 72 bp GCCGCAGACGGGCGGGCAGGCTCATGCGGAGCTCCTTaGGCTGGAACGACGTCTCCCGGAGCACTCGCCGCT +
Preference number: 6 (lower is better)
Translates to: AADGRAGSCGAP*AGTTSPGALAA
Trigger: AGCGGCGAGTGCTCCGGGAGACGTCGTTCCAGCGCAAGGAGCTCCGCATGAGCCTGCCCGCCCGTCTGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CCA 72 bp AAGAGGGAAGGGCGGCTGAACTGGAGGACAGGTCCCTaGGGGCCGCGCCGGGCTGGGAGACGGGGCATGATG +
Preference number: 6 (lower is better)
Translates to: KREGRLNWRTGP*GPRRAGRRGMM
Trigger: CATCATGCCCCGTCTCCCAGCCCGGCGCGGCCCCCAGGGACCTGTCCTCCAGTTCAGCCGCCCTTCCCTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CAA 90 bp CGATCCAGCTTTCCTGGCTCTGAGAAGCACCACTTCCGCTGCTGGTaGGCGAGGGGACCCCGGCCGGCAGTTCCTGGCGCGGGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: RSSFPGSEKHHFRCW*ARGPRPAVPGAGAR
Trigger: CCGGGCTCCCGCGCCAGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTGGATCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 72 bp GCGTCCTCCTCCTGCCGCTGCAGGAGCCGGAGTCGCTaGAGCAGGGAGGCCTGCTCATCAGGGTCGCTGTCT +
Preference number: 6 (lower is better)
Translates to: ASSSCRCRSRSR*SREACSSGSLS
Trigger: AGACAGCGACCCTGATGAGCAGGCCTCCCTGCTGCAGCGACTCCGGCTCCTGCAGCGGCAGGAGGAGGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp GGTGAGGAGCTCCGGGTGAGGGCTGGGACAGCCTGCTaGCCCCGCCACCACGGACGGCCAGACACTTACACT +
Preference number: 6 (lower is better)
Translates to: GEELRVRAGTAC*PRHHGRPDTYT
Trigger: AGTGTAAGTGTCTGGCCGTCCGTGGTGGCGGGGCCAGCAGGCTGTCCCAGCCCTCACCCGGAGCTCCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS CCA 72 bp TTCCTGGCTCTGAGAAGCACCACTTCCGCTGCTGGTTaGCGAGGGGACCCCGGCCGGCAGTTCCTGGCGCGG +
Preference number: 6 (lower is better)
Translates to: FLALRSTTSAAG*RGDPGRQFLAR
Trigger: CCGCGCCAGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CAA 72 bp TTTCCTGGCTCTGAGAAGCACCACTTCCGCTGCTGGTaGGCGAGGGGACCCCGGCCGGCAGTTCCTGGCGCG +
Preference number: 6 (lower is better)
Translates to: FPGSEKHHFRCW*ARGPRPAVPGA
Trigger: CGCGCCAGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS TCA 72 bp GCGTGGGTCCTGGGAAAACACAGATGTGGTGCCGGGTaGGGAGCTCCGGGTGAGGGCTGGGACAGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: AWVLGKHRCGAG*GAPGEGWDSLL
Trigger: CAGCAGGCTGTCCCAGCCCTCACCCGGAGCTCCTCACCCGGCACCACATCTGTGTTTTCCCAGGACCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS CCA 72 bp GCCTCCATGGCTGCGCAGATGAGTGCTGAGGCTGGGTaGCTGCGTGGGTCACTTCCCCTCCCTGGTCACACC +
Preference number: 6 (lower is better)
Translates to: ASMAAQMSAEAG*LRGSLPLPGHT
Trigger: GGTGTGACCAGGGAGGGGAAGTGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCATGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CAA 90 bp GGGAGACGGGGCATGATGGCCAAGGTCGTCCCTGATGGCGTCCAGTaGGTCCTGAAGGAGGCGGATGCGCTCGTCCAGGTTGCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GRRGMMAKVVPDGVQ*VLKEADALVQVALL
Trigger: CAGCAGCGCAACCTGGACGAGCGCATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGGGACGACCTTGGCCATCATGCCCCGTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS TCA 72 bp ACCGCCCCGACCCACACGATCCAGCTTTCCTGGCTCTaGGAAGCACCACTTCCGCTGCTGGTTGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: TAPTHTIQLSWL*EAPLPLLVGEG
Trigger: CCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTGGATCGTGTGGGTCGGGGCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS TCA 72 bp CTTCGCCTGAAGCGCTCCGACTCCGACTGGCGGGCCTaGAGGCATCACCGAGCTTCAAGGACCCGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: LRLKRSDSDWRA*RHHRASRTRSP
Trigger: TGGACTCCGGGTCCTTGAAGCTCGGTGATGCCTTCAGGCCCGCCAGTCGGAGTCGGAGCGCTTCAGGCGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000606676.1
ENST00000617339.4
CDS TCA 72 bp TGGCCAAGGTCGTCCCTGATGGCGTCCAGTTGGTCCTaGAGGAGGCGGATGCGCTCGTCCAGGTTGCGCTGC +
Preference number: 6 (lower is better)
Translates to: WPRSSLMASSWS*RRRMRSSRLRC
Trigger: GCAGCGCAACCTGGACGAGCGCATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGGGACGACCTTGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS TCA 72 bp GGCTGGGAGACGGGGCATGATGGCCAAGGTCGTCCCTaGTGGCGTCCAGTTGGTCCTGAAGGAGGCGGATGC +
Preference number: 6 (lower is better)
Translates to: GWETGHDGQGRP*WRPVGPEGGGC
Trigger: GCATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGGGACGACCTTGGCCATCATGCCCCGTCTCCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS GCA 72 bp TCCAGCTTTCCTGGCTCTGAGAAGCACCACTTCCGCTaGTGGTTGGCGAGGGGACCCCGGCCGGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: SSFPGSEKHHFR*WLARGPRPAVP
Trigger: AGGAACTGCCGGCCGGGGTCCCCTCGCCAACCAGCAGCGGAAGTGGTGCTTCTCAGAGCCAGGAAAGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 72 bp GGAGGCGGGCGGCCAGCTCCACTTTCTTGCCCTGGATaGTGTTGTTTGGTGCAGGGAGCCCCTGCCCACATG +
Preference number: 6 (lower is better)
Translates to: GGGRPAPLSCPG*CCLVQGAPAHM
Trigger: CATGTGGGCAGGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGGCCGCCCGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CAA 90 bp GGAGGCGGGCGGCCAGCTCCACTTTCTTGCCCTGGATGCTGTTGTTaGGTGCAGGGAGCCCCTGCCCACATGGCTGGTCAAGCACAGGGT +
Preference number: 6 (lower is better)
Translates to: GGGRPAPLSCPGCCC*VQGAPAHMAGQAQG
Trigger: ACCCTGTGCTTGACCAGCCATGTGGGCAGGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGGCCGCCCGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CAA 72 bp GAGCTTCAAGGACCCGGAGTCCAGGTTCATGGAGCCTaGGGGTTGCGTCTCGGGCAGCCATCCGACCTCGTG +
Preference number: 6 (lower is better)
Translates to: ELQGPGVQVHGA*GLRLGQPSDLV
Trigger: CACGAGGTCGGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTGGACTCCGGGTCCTTGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CAA 90 bp CCCCTGCAGCCGCTCCTGCTCCGTGTGAAGGTCCTGAAGCATCTTTaGGAGGCGGGCGGCCAGCTCCACTTTCTTGCCCTGGATGCTGTT +
Preference number: 6 (lower is better)
Translates to: PLQPLLLRVKVLKHL*EAGGQLHFLALDAV
Trigger: AACAGCATCCAGGGCAAGAAAGTGGAGCTGGCCGCCCGCCTCCAAAAGATGCTTCAGGACCTTCACACGGAGCAGGAGCGGCTGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CAA 90 bp CAGGGAGCACCTCTGAAGGTTGAGGGCCCAGCTCAGGGGAAGGAATaGGGACCAGCTCATTCCCTGCCAGGCTCCCCTTGCCCACACAAG +
Preference number: 6 (lower is better)
Translates to: QGAPLKVEGPAQGKE*GPAHSLPGSPCPHK
Trigger: CTTGTGTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGCTGGGCCCTCAACCTTCAGAGGTGCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp GCCTCCATGGCTGCGCAGATGAGTGCTGAGGCTGGGTaGCTGCGTGGGTCCTGGGAAAACACAGATGTGGTG +
Preference number: 6 (lower is better)
Translates to: ASMAAQMSAEAG*LRGSWENTDVV
Trigger: CACCACATCTGTGTTTTCCCAGGACCCACGCAGCCACCCAGCCTCAGCACTCATCTGCGCAGCCATGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319854.7
CDS CCA 72 bp CATCACCGAGCTTCAAGGACCCGGAGTCCAGGTTCATaGAGCCTTGGGGTTGCGTCTCGGGCAGCCATCCGA +
Preference number: 6 (lower is better)
Translates to: HHRASRTRSPGS*SLGVASRAAIR
Trigger: TCGGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTGGACTCCGGGTCCTTGAAGCTCGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CCA 72 bp TGGCCAGTTCTTTGGCCTAAGCCAGTTCCATACGGCTaGTCAGAGGCATGGACACTGGCTGGGGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: WPVLWPKPVPYG*SEAWTLAGGPW
Trigger: CCAGGGGCCCCCAGCCAGTGTCCATGCCTCTGACCAGCCGTATGGAACTGGCTTAGGCCAAAGAACTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CAA 72 bp CAAGGACCCGGAGTCCAGGTTCATGGAGCCTTGGGGTaGCGTCTCGGGCAGCCATCCGACCTCGTGATCTTC +
Preference number: 6 (lower is better)
Translates to: QGPGVQVHGALG*RLGQPSDLVIF
Trigger: GAAGATCACGAGGTCGGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTGGACTCCGGGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CAA 72 bp CCGCTCCTGCTCCGTGTGAAGGTCCTGAAGCATCTTTaGGAGGCGGGCGGCCAGCTCCACTTTCTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: PLLLRVKVLKHL*EAGGQLHFLAL
Trigger: CAGGGCAAGAAAGTGGAGCTGGCCGCCCGCCTCCAAAAGATGCTTCAGGACCTTCACACGGAGCAGGAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CAA 72 bp GGCATGATGGCCAAGGTCGTCCCTGATGGCGTCCAGTaGGTCCTGAAGGAGGCGGATGCGCTCGTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: GMMAKVVPDGVQ*VLKEADALVQV
Trigger: AACCTGGACGAGCGCATCCGCCTCCTTCAGGACCAACTGGACGCCATCAGGGACGACCTTGGCCATCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CAA 72 bp CCTCTGAAGGTTGAGGGCCCAGCTCAGGGGAAGGAATaGGGACCAGCTCATTCCCTGCCAGGCTCCCCTTGC +
Preference number: 6 (lower is better)
Translates to: PLKVEGPAQGKE*GPAHSLPGSPC
Trigger: GCAAGGGGAGCCTGGCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGCTGGGCCCTCAACCTTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS TCA 72 bp CCTTGGGGTTGCGTCTCGGGCAGCCATCCGACCTCGTaGTCTTCAAACTTAGCCAGCGCCGGATGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: PWGCVSGSHPTS*SSNLASAGCWN
Trigger: GTTCCAGCATCCGGCGCTGGCTAAGTTTGAAGATCACGAGGTCGGATGGCTGCCCGAGACGCAACCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS TCA 72 bp GAAGTAGGACCAGTCCCAGGGAGCACCTCTGAAGGTTaGGGGCCCAGCTCAGGGGAAGGAATTGGGACCAGC +
Preference number: 6 (lower is better)
Translates to: EVGPVPGSTSEG*GPSSGEGIGTS
Trigger: GCTGGTCCCAATTCCTTCCCCTGAGCTGGGCCCTCAACCTTCAGAGGTGCTCCCTGGGACTGGTCCTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS TCA 72 bp GGCAGAGGAAGTAGGACCAGTCCCAGGGAGCACCTCTaGAGGTTGAGGGCCCAGCTCAGGGGAAGGAATTGG +
Preference number: 6 (lower is better)
Translates to: GRGSRTSPREHL*RLRAQLRGRNW
Trigger: CCAATTCCTTCCCCTGAGCTGGGCCCTCAACCTTCAGAGGTGCTCCCTGGGACTGGTCCTACTTCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp GGCCAGCTCCACTTTCTTGCCCTGGATGCTGTTGTTTaGTGCAGGGAGCCCCTGCCCACATGGCTGGTCAAG +
Preference number: 6 (lower is better)
Translates to: GQLHFLALDAVV*CREPLPTWLVK
Trigger: CTTGACCAGCCATGTGGGCAGGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CAA 72 bp CGGCCAGCTCCACTTTCTTGCCCTGGATGCTGTTGTTaGGTGCAGGGAGCCCCTGCCCACATGGCTGGTCAA +
Preference number: 6 (lower is better)
Translates to: RPAPLSCPGCCC*VQGAPAHMAGQ
Trigger: TTGACCAGCCATGTGGGCAGGGGCTCCCTGCACCAAACAACAGCATCCAGGGCAAGAAAGTGGAGCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000488072.1
ENST00000617339.4
CDS CAA 90 bp GGCATCACCGAGCTTCAAGGACCCGGAGTCCAGGTTCATGGAGCCTaGGGGTTGCGTCTCGGGCAGCCATCCGACCTCGTGATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: GITELQGPGVQVHGA*GLRLGQPSDLVIFK
Trigger: TTTGAAGATCACGAGGTCGGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTGGACTCCGGGTCCTTGAAGCTCGGTGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS CAA 90 bp TCAGGGGAAGGAATTGGGACCAGCTCATTCCCTGCCAGGCTCCCCTaGCCCACACAAGCAGCCTTTACCCTGAGACCTCCTGGAACGCTG +
Preference number: 6 (lower is better)
Translates to: SGEGIGTSSFPARLP*PTQAAFTLRPPGTL
Trigger: CAGCGTTCCAGGAGGTCTCAGGGTAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 72 bp CAGCTCAGGGGAAGGAATTGGGACCAGCTCATTCCCTaGCAGGCTCCCCTTGCCCACACAAGCAGCCTTTAC +
Preference number: 6 (lower is better)
Translates to: QLRGRNWDQLIP*QAPLAHTSSLY
Trigger: GTAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTCCCAATTCCTTCCCCTGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 72 bp CTGCAGAGAACCATTCACCCCCTGCCAGCAGTCATCTaGCCCTGCAGTTCCTGGACACTCATGGAGCGGGTA +
Preference number: 6 (lower is better)
Translates to: LQRTIHPLPAVI*PCSSWTLMERV
Trigger: TACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTCTCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495680.2
CDS GCA 72 bp GAGGAGGTCACTCTCTGCAGAGAACCATTCACCCCCTaGCAGCAGTCATCTGCCCCTGCAGTTCCTGGACAC +
Preference number: 6 (lower is better)
Translates to: EEVTLCREPFTP*QQSSAPAVPGH
Trigger: GTGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTCTCTGCAGAGAGTGACCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495680.2
CDS CAA 72 bp GGAATTGGGACCAGCTCATTCCCTGCCAGGCTCCCCTaGCCCACACAAGCAGCCTTTACCCTGAGACCTCCT +
Preference number: 6 (lower is better)
Translates to: GIGTSSFPARLP*PTQAAFTLRPP
Trigger: AGGAGGTCTCAGGGTAAAGGCTGCTTGTGTGGGCAAGGGGAGCCTGGCAGGGAATGAGCTGGTCCCAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CAA 72 bp GGTCACACCGTCACAAGCGCTGGCATCCCCCAGATTTaGGCAGAGTCACCTTGGGATCAGAGGTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GHTVTSAGIPQI*AESPWDQRWQR
Trigger: CCTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGCCAGCGCTTGTGACGGTGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CAA 90 bp ACCGAGCTTCAAGGACCCGGAGTCCAGGTTCATGGAGCCTTGGGGTaGCGTCTCGGGCAGCCATCCGACCTCGTGATCTTCAAACTTAGC +
Preference number: 6 (lower is better)
Translates to: TELQGPGVQVHGALG*RLGQPSDLVIFKLS
Trigger: GCTAAGTTTGAAGATCACGAGGTCGGATGGCTGCCCGAGACGCAACCCCAAGGCTCCATGAACCTGGACTCCGGGTCCTTGAAGCTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000440118.1
ENST00000617339.4
CDS GCA 72 bp AGAACCATTCACCCCCTGCCAGCAGTCATCTGCCCCTaGAGTTCCTGGACACTCATGGAGCGGGTACTCTGT +
Preference number: 6 (lower is better)
Translates to: RTIHPLPAVICP*SSWTLMERVLC
Trigger: ACAGAGTACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000495680.2
ENST00000617339.4
CDS GCA 72 bp ACCTACAGAACCATTCACCCCCTGCCAGCAGTCATCTaGCCCTGCAGTTCCTGGACACTCATGGAGCGGGTA +
Preference number: 6 (lower is better)
Translates to: TYRTIHPLPAVI*PCSSWTLMERV
Trigger: TACCCGCTCCATGAGTGTCCAGGAACTGCAGGGGCAGATGACTGCTGGCAGGGGGTGAATGGTTCTGTAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp CATTTGCAGTCCCAGTGGGGGTGTGGCTTGTGGGCCTaGAAATACCTACAGAACCATTCACCCCCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: HLQSQWGCGLWA*KYLQNHSPPAS
Trigger: GCTGGCAGGGGGTGAATGGTTCTGTAGGTATTTCCAGGCCCACAAGCCACACCCCCACTGGGACTGCAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp GTCACACCGTCACAAGCGCTGGCATCCCCCAGATTTTaGCAGAGTCACCTTGGGATCAGAGGTGGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: VTPSQALASPRF*QSHLGIRGGRG
Trigger: TCCTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGCCAGCGCTTGTGACGGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp CACTCATGGAGCGGGTACTCTGTGGGGACTGTAACCTaGCCAGTTCTTTGGCCTAAGCCAGTTCCATACGGC +
Preference number: 6 (lower is better)
Translates to: HSWSGYSVGTVT*PVLWPKPVPYG
Trigger: GCCGTATGGAACTGGCTTAGGCCAAAGAACTGGCCAGGTTACAGTCCCCACAGAGTACCCGCTCCATGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000495680.2
ENST00000617339.4
CDS CCA 72 bp GGGAAGCAAGAGGGTCACATAGAGAGGGATCTAATCTaGCCAGCTCCTGAACCAGCTCCTCGAGGCACTGAC +
Preference number: 6 (lower is better)
Translates to: GKQEGHIERDLI*PAPEPAPRGTD
Trigger: GTCAGTGCCTCGAGGAGCTGGTTCAGGAGCTGGCCAGATTAGATCCCTCTCTATGTGACCCTCTTGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp ACCAGCCTGCATCTCCTGACTTCCATACCTGGACAATaGGTATGGTCCCTCCTGATCCTCCCCAGGAACCCA +
Preference number: 6 (lower is better)
Translates to: TSLHLLTSIPGQ*VWSLLILPRNP
Trigger: TGGGTTCCTGGGGAGGATCAGGAGGGACCATACCCATTGTCCAGGTATGGAAGTCAGGAGATGCAGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CAA 72 bp AAGCGCTGGCATCCCCCAGATTTTGGCAGAGTCACCTaGGGATCAGAGGTGGCAGAGGAAGTAGGACCAGTC +
Preference number: 6 (lower is better)
Translates to: KRWHPPDFGRVT*GSEVAEEVGPV
Trigger: GACTGGTCCTACTTCCTCTGCCACCTCTGATCCCAAGGTGACTCTGCCAAAATCTGGGGGATGCCAGCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS GCA 72 bp CAGTCCAGTGGGGTCAATAGTTGGGATGTTATCATTTaGAGTCCCAGTGGGGGTGTGGCTTGTGGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: QSSGVNSWDVII*SPSGGVACGPG
Trigger: TCCAGGCCCACAAGCCACACCCCCACTGGGACTGCAAATGATAACATCCCAACTATTGACCCCACTGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS GCA 72 bp ATGTTCCTTTCCTCCCCAACCCTGTTCCACCCAGGCTaGTTCCTGGCCGTTCTGTTGGCTTCTCCATGTGAT +
Preference number: 6 (lower is better)
Translates to: MFLSSPTLFHPG*FLAVLLASPCD
Trigger: ATCACATGGAGAAGCCAACAGAACGGCCAGGAAGCAGCCTGGGTGGAACAGGGTTGGGGAGGAAAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp CTTGCCCACACAAGCAGCCTTTACCCTGAGACCTCCTaGAACGCTGAGAATGTACCCATGTTCCTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LAHTSSLYPETS*NAENVPMFLSS
Trigger: GGAGGAAAGGAACATGGGTACATTCTCAGCGTTCCAGGAGGTCTCAGGGTAAAGGCTGCTTGTGTGGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp CTGCATCTCCTGACTTCCATACCTGGACAATGGGTATaGTCCCTCCTGATCCTCCCCAGGAACCCAAGACTT +
Preference number: 6 (lower is better)
Translates to: LHLLTSIPGQWV*SLLILPRNPRL
Trigger: AAGTCTTGGGTTCCTGGGGAGGATCAGGAGGGACCATACCCATTGTCCAGGTATGGAAGTCAGGAGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CCA 72 bp AATGGTCTGGGGGTTTCTGCTCCTTGGGGAACAGCCTaGAAGGGTGAACAGTCGACTGAAATGTGGCTCAAG +
Preference number: 6 (lower is better)
Translates to: NGLGVSAPWGTA*KGEQSTEMWLK
Trigger: CTTGAGCCACATTTCAGTCGACTGTTCACCCTTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CCA 72 bp CCGTGTCTCTCACCTGGAAAGTTTGGTCTGAAACAATaGTCTGGGGGTTTCTGCTCCTTGGGGAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: PCLSPGKFGLKQ*SGGFCSLGNSL
Trigger: CAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTGAGAGACACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS TCA 72 bp GGCAGTATTGTGAGAGGGACCTGGAGTATCATTGCCTaGAAGTCCCAAGGCATCAGCTGGGACAGGTTTGAG +
Preference number: 6 (lower is better)
Translates to: GSIVRGTWSIIA*KSQGISWDRFE
Trigger: CTCAAACCTGTCCCAGCTGATGCCTTGGGACTTTCAGGCAATGATACTCCAGGTCCCTCTCACAATACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000495680.2
ENST00000617339.4
CDS TCA 72 bp AGAGTGGTCCGTGTCTCTCACCTGGAAAGTTTGGTCTaGAACAATGGTCTGGGGGTTTCTGCTCCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: RVVRVSHLESLV*NNGLGVSAPWG
Trigger: TCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTGAGAGACACGGACCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS GCA 72 bp CTAGGGCAGTATTGTGAGAGGGACCTGGAGTATCATTaGCTGAAAGTCCCAAGGCATCAGCTGGGACAGGTT +
Preference number: 6 (lower is better)
Translates to: LGQYCERDLEYH*LKVPRHQLGQV
Trigger: AACCTGTCCCAGCTGATGCCTTGGGACTTTCAGGCAATGATACTCCAGGTCCCTCTCACAATACTGCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000495680.2
ENST00000617339.4
CDS CCA 72 bp CTGAGGCAAGAACCTGGAAAGTTTGGTCTGAAACAATaGTCTGGGGGTTTCTGCTCCTTGGGGAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: LRQEPGKFGLKQ*SGGFCSLGNSL
Trigger: CAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTTCTTGCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp AGAGGCATGGACACTGGAAAGTTTGGTCTGAAACAATaGTCTGGGGGTTTCTGCTCCTTGGGGAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: RGMDTGKFGLKQ*SGGFCSLGNSL
Trigger: CAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGTGTCCATGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378676.1
CDS CCA 72 bp TCTCTCACCTGGAAAGTTTGGTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGGGAACAGCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: SLTWKVWSETMV*GFLLLGEQPGR
Trigger: CCTTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CCA 72 bp CCCCAACTTGGTCCAGAGTGGTCCGTGTCTCTCACCTaGAAAGTTTGGTCTGAAACAATGGTCTGGGGGTTT +
Preference number: 6 (lower is better)
Translates to: PQLGPEWSVSLT*KVWSETMVWGF
Trigger: AAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTGAGAGACACGGACCACTCTGGACCAAGTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606676.1
CDS CAA 90 bp TCCTCCCCAACCCTGTTCCACCCAGGCTGCTTCCTGGCCGTTCTGTaGGCTTCTCCATGTGATCTTTCCCTGATAAACAATGGTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SSPTLFHPGCFLAVL*ASPCDLSLINNGQE
Trigger: TTCTTGACCATTGTTTATCAGGGAAAGATCACATGGAGAAGCCAACAGAACGGCCAGGAAGCAGCCTGGGTGGAACAGGGTTGGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617339.4
CDS GCA 72 bp GGAAAGTTTGGTCTGAAACAATGGTCTGGGGGTTTCTaGTCCTTGGGGAACAGCCTGGACAATGGGTATGGT +
Preference number: 6 (lower is better)
Translates to: GKFGLKQWSGGF*SLGNSLDNGYG
Trigger: ACCATACCCATTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp GCAAGAACCTGGAAAGTTTGGTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGGGAACAGCCTGGACAA +
Preference number: 6 (lower is better)
Translates to: ARTWKVWSETMV*GFLLLGEQPGQ
Trigger: TTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGGTTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319854.7
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp GTTGGGATGTTATCATTTGCAGTCCCAGTGGGGGTGTaGCTTGTGGGCCTGGAAATACCTACAGAACCATTC +
Preference number: 6 (lower is better)
Translates to: VGMLSFAVPVGV*LVGLEIPTEPF
Trigger: GAATGGTTCTGTAGGTATTTCCAGGCCCACAAGCCACACCCCCACTGGGACTGCAAATGATAACATCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319854.7
ENST00000378676.1
ENST00000378679.8
ENST00000617339.4
CDS CCA 72 bp CATGGACACTGGAAAGTTTGGTCTGAAACAATGGTCTaGGGGTTTCTGCTCCTTGGGGAACAGCCTGGACAA +
Preference number: 6 (lower is better)
Translates to: HGHWKVWSETMV*GFLLLGEQPGQ
Trigger: TTGTCCAGGCTGTTCCCCAAGGAGCAGAAACCCCCAGACCATTGTTTCAGACCAAACTTTCCAGTGTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378676.1