Pregenerated sensors for SHQ1 (Homo sapiens)
Ensembl gene IDs: ENSG00000144736Ensembl transcript IDs: ENST00000325599.13, ENST00000444040.6, ENST00000463369.5, ENST00000468371.5, ENST00000471526.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGCCCCAAACTGGAAACAACCCAGGTGTCCATCGATAGGTCAATaGACAAATCTATTCAATGAAGCAGTACTCAGCAATGAAAAACAT | + |
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Preference number: 1 (lower is better) Translates to: TAPNWKQPRCPSIGQ*TNLFNEAVLSNEKH Trigger: ATGTTTTTCATTGCTGAGTACTGCTTCATTGAATAGATTTGTTCATTGACCTATCGATGGACACCTGGGTTGTTTCCAGTTTGGGGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGTATACATACGCCAACACATTGTACACTTTTGATACGTGCAGTTTATTGTTGTCCCCGTATCTGTaGGGGGTTGGTTCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: AGYTYANTLYTFDTCSLLLSPYL*GVGSRT Trigger: AGTCCTGGAACCAACCCCCCACAGATACGGGGACAA...CAATAAACTGCACGTATCAAAAGTGTACAATGTGTTGGCGTATGTATACCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTTGTCCCCGTATCTGTaGGGGGTTGGTTCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: KTRDTCYHMDESQNNYTELSPYL*GVGSRT Trigger: AGTCCTGGAACCAACCCCCCACAGATACGGGGACAA...CTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTATTTGCATATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTAATACGTGCAGTTTATTaGGTGTCAAGTACACCTCCT | + |
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Preference number: 2 (lower is better) Translates to: QYLHITYPHPPAQFKSSLIRAVY*VSSTPP Trigger: AGGAGGTGTACTTGACACCCAATAAACTGCACGTAT...TAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTATATGCAAATACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR CAA 90 bp | GATAGTTTTACGCAGGGTATACATACGCCAACACATTGTACACTTTaGATACGTGCAGTTTATTGGGTGTCAAGTACACCTCCTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: DSFTQGIHTPTHCTL*IRAVYWVSSTPPKI Trigger: TATTTTAGGAGGTGTACTTGACACCCAATAAACTGCACGTATCAAAAGTGTACAATGTGTTGGCGTATGTATACCCTGCGTAAAACTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR CCA 90 bp | CAAAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGATACGTGCAGTTTATTaGGTGTCAAGTACACCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QKLVTHATTWMNLKITILIRAVY*VSSTPP Trigger: AGGAGGTGTACTTGACACCCAATAAACTGCACGTAT...CAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGTATACATACGCCAACACATTGTACACTTTTGATACGTGCAGTTTATTGACACATGCTACCACATaGATGAATCTCAAAATAACT | + |
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Preference number: 2 (lower is better) Translates to: AGYTYANTLYTFDTCSLLTHATT*MNLKIT Trigger: AGTTATTTTGAGATTCATCCATGTGGTAGCATGTGT...CAATAAACTGCACGTATCAAAAGTGTACAATGTGTTGGCGTATGTATACCCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGGCACTTTTACCCAGTTaGAATATCTTTATAGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: KTRDTCYHMDESQNNYTEALLPS*NIFIVS Trigger: GGACACTATAAAGATATTGCAACTGGGTAAAAGTGC...CTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444040.6 |
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| 3UTR-3UTR CAA 90 bp | CTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTAAAAGGGCACAAGGGCACTaGGGAATGATGGGTCCGTTC | + |
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Preference number: 3 (lower is better) Translates to: LVTHATTWMNLKITILSKRAQGH*GMMGPF Trigger: GAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCT...TTTACTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR TCA 72 bp | CGCAGGGTATACATACGCCAACACATTGTACACTTTTaGTACGTGCAGTTTATTGGGTGTCAAGTACACCTC | + |
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Preference number: 3 (lower is better) Translates to: RRVYIRQHIVHF*YVQFIGCQVHL Trigger: GAGGTGTACTTGACACCCAATAAACTGCACGTATCAAAAGTGTACAATGTGTTGGCGTATGTATACCCTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGGGTATACATACGCCAACACATTGTACACTTTTGATACGTGCAGTTTATTGGATACGTGCAGTTTATaGGGTGTCAAGTACACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AGYTYANTLYTFDTCSLLDTCSL*GVKYTS Trigger: GGAGGTGTACTTGACACCCAATAAACTGCACGTATC...CAATAAACTGCACGTATCAAAAGTGTACAATGTGTTGGCGTATGTATACCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| 3UTR TCA 72 bp | AACTGGAAACAACCCAGGTGTCCATCGATAGGTCAATaGACAAATCTATTCAATGAAGCAGTACTCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NWKQPRCPSIGQ*TNLFNEAVLSN Trigger: ATTGCTGAGTACTGCTTCATTGAATAGATTTGTTCATTGACCTATCGATGGACACCTGGGTTGTTTCCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | CAGTATTTGCATATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTAGCCGCTCGCTCTCACTaGCGCCGCGTTCCCGCCACG | + |
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Preference number: 4 (lower is better) Translates to: QYLHITYPHPPAQFKSSLAARSH*RRVPAT Trigger: CGTGGCGGGAACGCGGCGGCAGTGAGAGCGAGCGGC...TAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTATATGCAAATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR TCA 90 bp | CAAACTAATAACAGGGCACAAGGGCACTTGGGAATGATGGGTCCGTTCCTCACTGCTTGGCGTAGAACTTaGAGTCAGACCCCTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QTNNRAQGHLGMMGPFLTAWRRT*SQTPRS Trigger: ACTTCGAGGGGTCTGACTTCAAGTTCTACGCCAAGC...AGTGAGGAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCTGTTATTAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | ATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTAGATTACTTATATGCCGCTCGCTCTCACTaGCGCCGCGTTCCCGCCACG | + |
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Preference number: 4 (lower is better) Translates to: ITYPHPPAQFKSSLDYLYAARSH*RRVPAT Trigger: CGTGGCGGGAACGCGGCGGCAGTGAGAGCGAGCGGC...ATATAAGTAATCTAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR TCA 90 bp | CAAACTAATAACAGGGCACAAGGGCACTTGGGAATGATGGGTCCGTTCCTCACTGGTCTCATGAAGTCCTaGGAAAGTATGGCTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTNNRAQGHLGMMGPFLTGLMKS*ESMAWR Trigger: ACGCCAAGCCATACTTTCTCAGGACTTCATGAGACC...AGTGAGGAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCTGTTATTAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444040.6 |
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| CDS-3UTR TCA 90 bp | GACATGCAAACTAATAACAGGGCACAAGGGCACTTGGGAATGATGGGTCCGTTCCAGGAAGGGTTAATCTaGGAAAGTATGGCTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DMQTNNRAQGHLGMMGPFQEGLI*ESMAWR Trigger: ACGCCAAGCCATACTTTCTCAGATTAACCCTTCCTG...GAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCTGTTATTAGTTTGCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325599.13 |
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| CDS-3UTR CCA 90 bp | CTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTAAAAGGAAGTCCGGATCCTaGCTGAGGTCGAACGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVTHATTWMNLKITILSKRKSGS*LRSNAG Trigger: CCCGGCGTTCGACCTCAGCCAGGATCCGGACTTCCT...TTTACTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | AAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTAGGAAGTCCGGATCCTaGCTGAGGTCGAACGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLVTHATTWMNLKITILSRKSGS*LRSNAG Trigger: CCCGGCGTTCGACCTCAGCCAGGATCCGGACTTCCT...ACTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | CAAACTAATAACAGGGCACAAGGGCACTTGGGAATGATGGGTCCGTTCCTCACTTCAAGAAAGGGACCTTaGAAAGAACTGACTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTNNRAQGHLGMMGPFLTSRKGP*KELTVS Trigger: TGAGACAGTCAGTTCTTTGCAAGGTCCCTTTCTTGA...AGTGAGGAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCTGTTATTAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | CAGTATTTGCATATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTATTGTCCCCGTATCTGTaGGGGGTTGGTTCCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QYLHITYPHPPAQFKSSLLSPYL*GVGSRT Trigger: AGTCCTGGAACCAACCCCCCACAGATACGGGGACAA...TAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTATATGCAAATACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | AAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTTTGTCCCCGTATCTGTaGGGGGTTGGTTCCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: KLVTHATTWMNLKITILSLSPYL*GVGSRT Trigger: AGTCCTGGAACCAACCCCCCACAGATACGGGGACAA...ACTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR TCA 90 bp | AAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTGCTTGGCGTAGAACTTaGAGTCAGACCCCTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: KLVTHATTWMNLKITILSAWRRT*SQTPRS Trigger: ACTTCGAGGGGTCTGACTTCAAGTTCTACGCCAAGC...ACTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | CAGTATTTGCATATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTATGCGGTTTACAGCAGTaGTGCCCTTGGGTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QYLHITYPHPPAQFKSSLCGLQQ*CPWVQK Trigger: TTTCTGAACCCAAGGGCACCACTGCTGTAAACCGCA...TAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTATATGCAAATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | AATCCACAGATGTGGAACACACAAATACAGTGGGCTGACTATATACTAAGAAAACAGGAAGGGTTAATATaGGGCCTCCGCAGCTACAGT | + |
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Preference number: 4 (lower is better) Translates to: NPQMWNTQIQWADYILRKQEGLI*GLRSYS Trigger: ACTGTAGCTGCGGAGGCCCCATATTAACCCTTCCTG...TTTTCTTAGTATATAGTCAGCCCACTGTATTTGTGTGTTCCACATCTGTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463369.5 |
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| CDS-3UTR CCA 90 bp | CAAAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGTGCGGTTTACAGCAGTaGTGCCCTTGGGTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QKLVTHATTWMNLKITILCGLQQ*CPWVQK Trigger: TTTCTGAACCCAAGGGCACCACTGCTGTAAACCGCA...CAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | AATCCACAGATGTGGAACACACAAATACAGTGGGCTGACTATATACTAAGAAAATGCGGTTTACAGCAGTaGTGCCCTTGGGTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: NPQMWNTQIQWADYILRKCGLQQ*CPWVQK Trigger: TTTCTGAACCCAAGGGCACCACTGCTGTAAACCGCA...TTTTCTTAGTATATAGTCAGCCCACTGTATTTGTGTGTTCCACATCTGTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000325599.13 ENST00000444040.6 ENST00000463369.5 |
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| CDS-3UTR CCA 90 bp | AATCCACAGATGTGGAACACACAAATACAGTGGGCTGACTATATACTAAGAAAACTCTGTTACTCAGGCTaGAGTGCGATAGCGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: NPQMWNTQIQWADYILRKLCYSG*SAIAQS Trigger: AGATTGCGCTATCGCACTCCAGCCTGAGTAACAGAG...TTTTCTTAGTATATAGTCAGCCCACTGTATTTGTGTGTTCCACATCTGTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463369.5 |
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| CDS-3UTR TCA 90 bp | CTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTAAATTAACACAGGTCTCATaGAGTCCTGAGAAAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: LVTHATTWMNLKITILSKLTQVS*SPEKVW Trigger: CCATACTTTCTCAGGACTTCATGAGACCTGTGTTAA...TTTACTCAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | CAAAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGTCAAGAAAGGGACCTTaGAAAGAACTGACTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QKLVTHATTWMNLKITILSRKGP*KELTVS Trigger: TGAGACAGTCAGTTCTTTGCAAGGTCCCTTTCTTGA...CAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | AATCCACAGATGTGGAACACACAAATACAGTGGGCTGACTATATACTAAGAAAATCAAGAAAGGGACCTTaGAAAGAACTGACTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NPQMWNTQIQWADYILRKSRKGP*KELTVS Trigger: TGAGACAGTCAGTTCTTTGCAAGGTCCCTTTCTTGA...TTTTCTTAGTATATAGTCAGCCCACTGTATTTGTGTGTTCCACATCTGTGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000325599.13 ENST00000444040.6 ENST00000463369.5 |
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| CDS-3UTR GCA 90 bp | TCAAGTACACCTCCTAAAATAAAAATATTGATGGGCTCTACATTCTGGAGACACCAGGAAGGGTTAATCTaGAGATTTAACACAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSTPPKIKILMGSTFWRHQEGLI*RFNTGL Trigger: GAGACCTGTGTTAAATCTGCAGATTAACCCTTCCTG...GTGTCTCCAGAATGTAGAGCCCATCAATATTTTTATTTTAGGAGGTGTACTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | CAAAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAGTCCTGAGAAAGTATaGCTTGGCGTAGAACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: QKLVTHATTWMNLKITILSPEKV*LGVELE Trigger: TTCAAGTTCTACGCCAAGCCATACTTTCTCAGGACT...CAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | TCAAGTACACCTCCTAAAATAAAAATATTGATGGGCTCTACATTCTGGAGACACGCACTTTTACCCAGTTaGAATATCTTTATAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SSTPPKIKILMGSTFWRHALLPS*NIFIVS Trigger: GGACACTATAAAGATATTGCAACTGGGTAAAAGTGC...GTGTCTCCAGAATGTAGAGCCCATCAATATTTTTATTTTAGGAGGTGTACTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR GCA 90 bp | AATCCACAGATGTGGAACACACAAATACAGTGGGCTGACTATATACTAAGAAAAGCACTTTTACCCAGTTaGAATATCTTTATAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NPQMWNTQIQWADYILRKALLPS*NIFIVS Trigger: GGACACTATAAAGATATTGCAACTGGGTAAAAGTGC...TTTTCTTAGTATATAGTCAGCCCACTGTATTTGTGTGTTCCACATCTGTGGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000325599.13 ENST00000444040.6 ENST00000463369.5 |
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| CDS-3UTR GCA 90 bp | ATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTAGATTACTTATATGCACTTTTACCCAGTTaGAATATCTTTATAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ITYPHPPAQFKSSLDYLYALLPS*NIFIVS Trigger: GGACACTATAAAGATATTGCAACTGGGTAAAAGTGC...ATATAAGTAATCTAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CCA 90 bp | CAAAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGACACATGCTACCACATaGATGAATCTCAAAATAACT | + |
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Preference number: 4 (lower is better) Translates to: QKLVTHATTWMNLKITILTHATT*MNLKIT Trigger: AGTTATTTTGAGATTCATCCATGTGGTAGCATGTGT...CAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS GCA 90 bp | AGCATCGCCGCACCGGACGCAAGGGCCGGCGCCGCTCGCTCTCACTaGCGCCGCGTTCCCGCCACGCAAACTCTCCAACTCCCCACGCGC | + |
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Preference number: 5 (lower is better) Translates to: SIAAPDARAGAARSH*RRVPATQTLQLPTR Trigger: GCGCGTGGGGAGTTGGAGAGTTTGCGTGGCGGGAACGCGGCGGCAGTGAGAGCGAGCGGCGCCGGCCCTTGCGTCCGGTGCGGCGATGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000471526.1 |
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| CDS CCA 90 bp | ACCTCTCCTGTTCAATTCCCAGAAGGAAAACTGGAGGCTTCAGGATaGGTAAGATACAGGGCCACTGAGTTGAGGGACCAAGATCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: TSPVQFPEGKLEASG*VRYRATELRDQDLN Trigger: ATTTAGATCTTGGTCCCTCAACTCAGTGGCCCTGTATCTTACCCATCCTGAAGCCTCCAGTTTTCCTTCTGGGAATTGAACAGGAGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS TCA 90 bp | GCTCTTTCTACAGACTTGTTTCCATGCCTTTTTCCCTTCTCCATGTaGCCTAGCCCACTATCAAGGTCTAGCTCCAGTCTTCATTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ALSTDLFPCLFPFSM*PSPLSRSSSSLHSF Trigger: GAAGGAATGAAGACTGGAGCTAGACCTTGATAGTGGGCTAGGTCACATGGAGAAGGGAAAAAGGCATGGAAACAAGTCTGTAGAAAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS-3UTR CAA 90 bp | TCAAGTACACCTCCTAAAATAAAAATATTGATGGGCTCTACATTCTGGAGACACAGGGCACAAGGGCACTaGGGAATGATGGGTCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: SSTPPKIKILMGSTFWRHRAQGH*GMMGPF Trigger: GAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCT...GTGTCTCCAGAATGTAGAGCCCATCAATATTTTTATTTTAGGAGGTGTACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS TCA 90 bp | TTCCTTGGAGATGCTCCTTGTATCTGCCCTTTCTATGCCATTGCCTaGGCTCCTATGTTCACTCATATTCTCATCTCATGCCTCGATTTT | + |
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Preference number: 5 (lower is better) Translates to: FLGDAPCICPFYAIA*APMFTHILISCLDF Trigger: AAAATCGAGGCATGAGATGAGAATATGAGTGAACATAGGAGCTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 90 bp | CAAGATCTAAATTCCAATCTTAATGGCTCCAGAGGCTACCCACTGTaGCATGCTACCTGTATGTTCTTGCCTCATCCAGTCTATATCACA | + |
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Preference number: 5 (lower is better) Translates to: QDLNSNLNGSRGYPL*HATCMFLPHPVYIT Trigger: TGTGATATAGACTGGATGAGGCAAGAACATACAGGTAGCATGGCACAGTGGGTAGCCTCTGGAGCCATTAAGATTGGAATTTAGATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 90 bp | ATTTTTCCTTGGAGATGCTCCTTGTATCTGCCCTTTCTATGCCATTaGCTGAGCTCCTATGTTCACTCATATTCTCATCTCATGCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: IFPWRCSLYLPFLCH*LSSYVHSYSHLMPR Trigger: TCGAGGCATGAGATGAGAATATGAGTGAACATAGGAGCTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCAAGGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS-3UTR CAA 90 bp | CAAACTAATAACAGGGCACAAGGGCACTTGGGAATGATGGGTCCGTTCCTCACTAAAATGGTGCAGTATTaGCATATAACCTACCCACAT | + |
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Preference number: 5 (lower is better) Translates to: QTNNRAQGHLGMMGPFLTKMVQY*HITYPH Trigger: ATGTGGGTAGGTTATATGCAAATACTGCACCATTTT...AGTGAGGAACGGACCCATCATTCCCAAGTGCCCTTGTGCCCTGTTATTAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CAA 90 bp | CAGTATTTGCATATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTAGATACGTGCAGTTTATaGGGTGTCAAGTACACCTCC | + |
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Preference number: 5 (lower is better) Translates to: QYLHITYPHPPAQFKSSLDTCSL*GVKYTS Trigger: GGAGGTGTACTTGACACCCAATAAACTGCACGTATC...TAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTATATGCAAATACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS-3UTR CAA 90 bp | ATAACCTACCCACATCCTCCTGCACAGTTTAAATCATCACTAGATTACTTATATGATACGTGCAGTTTATaGGGTGTCAAGTACACCTCC | + |
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Preference number: 5 (lower is better) Translates to: ITYPHPPAQFKSSLDYLYDTCSL*GVKYTS Trigger: GGAGGTGTACTTGACACCCAATAAACTGCACGTATC...ATATAAGTAATCTAGTGATGATTTAAACTGTGCAGGAGGATGTGGGTAGGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS TCA 90 bp | TCAGTGCTATGGCTTATCAAAGTGGCACAGGTTAACTATGTCAAATaGTTAGTGTGGATCACCCCAGCACAAGCCTATTTTAATTACAAA | + |
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Preference number: 5 (lower is better) Translates to: SVLWLIKVAQVNYVK*LVWITPAQAYFNYK Trigger: TTTGTAATTAAAATAGGCTTGTGCTGGGGTGATCCACACTAATCATTTGACATAGTTAACCTGTGCCACTTTGATAAGCCATAGCACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 90 bp | CTAAAGCTACAAGATGTCAAGTTCATTTGGTTAAGGCAAGGTCAGTaGTATGGCTTATCAAAGTGGCACAGGTTAACTATGTCAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: LKLQDVKFIWLRQGQ*YGLSKWHRLTMSND Trigger: ATCATTTGACATAGTTAACCTGTGCCACTTTGATAAGCCATAGCACTGACCTTGCCTTAACCAAATGAACTTGACATCTTGTAGCTTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS TCA 90 bp | ATGAATGAATACATGATAGACACAGTAATCACCCAGCTTAAACCTTaGAAATTTCTTTCATTCTACGGTCTCACCCGTCAAATCCTGATG | + |
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Preference number: 5 (lower is better) Translates to: MNEYMIDTVITQLKP*KFLSFYGLTRQILM Trigger: CATCAGGATTTGACGGGTGAGACCGTAGAATGAAAGAAATTTTCAAGGTTTAAGCTGGGTGATTACTGTGTCTATCATGTATTCATTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS-3UTR CAA 90 bp | CAAAAACTCGTGACACATGCTACCACATGGATGAATCTCAAAATAACTATACTGAAAATGGTGCAGTATTaGCATATAACCTACCCACAT | + |
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Preference number: 5 (lower is better) Translates to: QKLVTHATTWMNLKITILKMVQY*HITYPH Trigger: ATGTGGGTAGGTTATATGCAAATACTGCACCATTTT...CAGTATAGTTATTTTGAGATTCATCCATGTGGTAGCATGTGTCACGAGTTTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000444040.6 |
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| CDS TCA 90 bp | TTCATTCTTATCTTTACAGTTCTGAAACGCGGAAATACTGTATACTaGGTTCATGAAGATACTGGATGCACTTTCATTGACATTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: FILIFTVLKRGNTVY*VHEDTGCTFIDISH Trigger: ATGGGAAATGTCAATGAAAGTGCATCCAGTATCTTCATGAACTCAGTATACAGTATTTCCGCGTTTCAGAACTGTAAAGATAAGAATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CCA 90 bp | AAGCCATCAAGTATTAAAGCCTTGTTCAACCTAACTACTTCCTCCTaGTTTTTAAATGAACCTAGTTTTAACCCAACCAAAGTCTACAAA | + |
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Preference number: 5 (lower is better) Translates to: KPSSIKALFNLTTSS*FLNEPSFNPTKVYK Trigger: TTTGTAGACTTTGGTTGGGTTAAAACTAGGTTCATTTAAAAACCAGGAGGAAGTAGTTAGGTTGAACAAGGCTTTAATACTTGATGGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 72 bp | GCACCGGACGCAAGGGCCGGCGCCGCTCGCTCTCACTaGCGCCGCGTTCCCGCCACGCAAACTCTCCAACTC | + |
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Preference number: 6 (lower is better) Translates to: APDARAGAARSH*RRVPATQTLQL Trigger: GAGTTGGAGAGTTTGCGTGGCGGGAACGCGGCGGCAGTGAGAGCGAGCGGCGCCGGCCCTTGCGTCCGGTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325599.13 ENST00000471526.1 |
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| CDS CCA 72 bp | CTACTCGGGAGGCTGAGGCAGGAGAACGGCGTGAACTaGGGAGGTGGAGCTTGCCGTGAGCCAAGATCGCGC | + |
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Preference number: 6 (lower is better) Translates to: LLGRLRQENGVN*GGGACREPRSR Trigger: GCGCGATCTTGGCTCACGGCAAGCTCCACCTCCCCAGTTCACGCCGTTCTCCTGCCTCAGCCTCCCGAGTAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CCA 72 bp | GTTCAATTCCCAGAAGGAAAACTGGAGGCTTCAGGATaGGTAAGATACAGGGCCACTGAGTTGAGGGACCAA | + |
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Preference number: 6 (lower is better) Translates to: VQFPEGKLEASG*VRYRATELRDQ Trigger: TTGGTCCCTCAACTCAGTGGCCCTGTATCTTACCCATCCTGAAGCCTCCAGTTTTCCTTCTGGGAATTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 90 bp | GGAAAACTGGAGGCTTCAGGATGGGTAAGATACAGGGCCACTGAGTaGAGGGACCAAGATCTAAATTCCAATCTTAATGGCTCCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GKLEASGWVRYRATE*RDQDLNSNLNGSRG Trigger: GCCTCTGGAGCCATTAAGATTGGAATTTAGATCTTGGTCCCTCAACTCAGTGGCCCTGTATCTTACCCATCCTGAAGCCTCCAGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CCA 72 bp | AGGTCTAGCTCCAGTCTTCATTCCTTCGGGAAGTTCTaGGCTGACTTTCCTAGTCTTCACGGTCCTTTACTA | + |
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Preference number: 6 (lower is better) Translates to: RSSSSLHSFGKF*ADFPSLHGPLL Trigger: TAGTAAAGGACCGTGAAGACTAGGAAAGTCAGCCCAGAACTTCCCGAAGGAATGAAGACTGGAGCTAGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS TCA 72 bp | ACAGACTTGTTTCCATGCCTTTTTCCCTTCTCCATGTaGCCTAGCCCACTATCAAGGTCTAGCTCCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TDLFPCLFPFSM*PSPLSRSSSSL Trigger: AAGACTGGAGCTAGACCTTGATAGTGGGCTAGGTCACATGGAGAAGGGAAAAAGGCATGGAAACAAGTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 72 bp | GAGGCTTCAGGATGGGTAAGATACAGGGCCACTGAGTaGAGGGACCAAGATCTAAATTCCAATCTTAATGGC | + |
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Preference number: 6 (lower is better) Translates to: EASGWVRYRATE*RDQDLNSNLNG Trigger: GCCATTAAGATTGGAATTTAGATCTTGGTCCCTCAACTCAGTGGCCCTGTATCTTACCCATCCTGAAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 90 bp | GATTTTTCCTTGGAGATGCTCCTTGTATCTGCCCTTTCTATGCCATaGCCTGAGCTCCTATGTTCACTCATATTCTCATCTCATGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: DFSLEMLLVSALSMP*PELLCSLIFSSHAS Trigger: CGAGGCATGAGATGAGAATATGAGTGAACATAGGAGCTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCAAGGAAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 90 bp | TCTTTCATTCTACGGTCTCACCCGTCAAATCCTGATGATTTTTCCTaGGAGATGCTCCTTGTATCTGCCCTTTCTATGCCATTGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SFILRSHPSNPDDFS*EMLLVSALSMPLPE Trigger: CTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCAAGGAAAAATCATCAGGATTTGACGGGTGAGACCGTAGAATGAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 72 bp | TGGAGATGCTCCTTGTATCTGCCCTTTCTATGCCATTaGCTGAGCTCCTATGTTCACTCATATTCTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: WRCSLYLPFLCH*LSSYVHSYSHL Trigger: GAGATGAGAATATGAGTGAACATAGGAGCTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 72 bp | TTTCCTTGGAGATGCTCCTTGTATCTGCCCTTTCTATaGCATTGCCTGAGCTCCTATGTTCACTCATATTCT | + |
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Preference number: 6 (lower is better) Translates to: FPWRCSLYLPFL*HCLSSYVHSYS Trigger: AGAATATGAGTGAACATAGGAGCTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCAAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 72 bp | TTGGAGATGCTCCTTGTATCTGCCCTTTCTATGCCATaGCCTGAGCTCCTATGTTCACTCATATTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LEMLLVSALSMP*PELLCSLIFSS Trigger: AGATGAGAATATGAGTGAACATAGGAGCTCAGGCAATGGCATAGAAAGGGCAGATACAAGGAGCATCTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS TCA 72 bp | TGGCTTATCAAAGTGGCACAGGTTAACTATGTCAAATaGTTAGTGTGGATCACCCCAGCACAAGCCTATTTT | + |
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Preference number: 6 (lower is better) Translates to: WLIKVAQVNYVK*LVWITPAQAYF Trigger: AAAATAGGCTTGTGCTGGGGTGATCCACACTAATCATTTGACATAGTTAACCTGTGCCACTTTGATAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS GCA 72 bp | CAAGATGTCAAGTTCATTTGGTTAAGGCAAGGTCAGTaGTATGGCTTATCAAAGTGGCACAGGTTAACTATG | + |
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Preference number: 6 (lower is better) Translates to: QDVKFIWLRQGQ*YGLSKWHRLTM Trigger: CATAGTTAACCTGTGCCACTTTGATAAGCCATAGCACTGACCTTGCCTTAACCAAATGAACTTGACATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 90 bp | AAACTAACACTTAGAAGGCCTAAAGCTACAAGATGTCAAGTTCATTaGGTTAAGGCAAGGTCAGTGCTATGGCTTATCAAAGTGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: KLTLRRPKATRCQVH*VKARSVLWLIKVAQ Trigger: CTGTGCCACTTTGATAAGCCATAGCACTGACCTTGCCTTAACCAAATGAACTTGACATCTTGTAGCTTTAGGCCTTCTAAGTGTTAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CCA 72 bp | TGTCAAGTTCATTTGGTTAAGGCAAGGTCAGTGCTATaGCTTATCAAAGTGGCACAGGTTAACTATGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: CQVHLVKARSVL*LIKVAQVNYVK Trigger: TTTGACATAGTTAACCTGTGCCACTTTGATAAGCCATAGCACTGACCTTGCCTTAACCAAATGAACTTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CCA 72 bp | TTAGAAGGCCTAAAGCTACAAGATGTCAAGTTCATTTaGTTAAGGCAAGGTCAGTGCTATGGCTTATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LEGLKLQDVKFI*LRQGQCYGLSK Trigger: CTTTGATAAGCCATAGCACTGACCTTGCCTTAACCAAATGAACTTGACATCTTGTAGCTTTAGGCCTTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 72 bp | CTTAGAAGGCCTAAAGCTACAAGATGTCAAGTTCATTaGGTTAAGGCAAGGTCAGTGCTATGGCTTATCAAA | + |
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Preference number: 6 (lower is better) Translates to: LRRPKATRCQVH*VKARSVLWLIK Trigger: TTTGATAAGCCATAGCACTGACCTTGCCTTAACCAAATGAACTTGACATCTTGTAGCTTTAGGCCTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS TCA 72 bp | TACATGATAGACACAGTAATCACCCAGCTTAAACCTTaGAAATTTCTTTCATTCTACGGTCTCACCCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: YMIDTVITQLKP*KFLSFYGLTRQ Trigger: TTGACGGGTGAGACCGTAGAATGAAAGAAATTTTCAAGGTTTAAGCTGGGTGATTACTGTGTCTATCATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS TCA 72 bp | ATCTTTACAGTTCTGAAACGCGGAAATACTGTATACTaGGTTCATGAAGATACTGGATGCACTTTCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: IFTVLKRGNTVY*VHEDTGCTFID Trigger: GTCAATGAAAGTGCATCCAGTATCTTCATGAACTCAGTATACAGTATTTCCGCGTTTCAGAACTGTAAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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| CDS CAA 72 bp | AACTCACATGAACAAAAGCCATCAAGTATTAAAGCCTaGTTCAACCTAACTACTTCCTCCTGGTTTTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: NSHEQKPSSIKA*FNLTTSSWFLN Trigger: ATTTAAAAACCAGGAGGAAGTAGTTAGGTTGAACAAGGCTTTAATACTTGATGGCTTTTGTTCATGTGAGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468371.5 |
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