RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHPRH (Homo sapiens)

Ensembl gene IDs: ENSG00000146414

Ensembl transcript IDs: ENST00000275233.12, ENST00000367503.7, ENST00000367505.6, ENST00000417762.5, ENST00000433355.6, ENST00000438092.6, ENST00000519632.5, ENST00000521977.1, ENST00000523276.1, ENST00000629427.2

Found 1490 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCTTCAGCACTACTGTCTCCTCACCGAAGCAGAGCTTCCCTGTaGTCTTTGTTGCCAGCGTACCTGCCTGGATTGCCTGTCCCTAGT +
Preference number: 1 (lower is better)
Translates to: PPSALLSPHRSRASL*SLLPAYLPGLPVPS
Trigger: ACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCTTCGGTGAGGAGACAGTAGTGCTGAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CTCACCGAAGCAGAGCTTCCCTGTGGTCTTTGTTGCCAGCGTACCTaGCTGGATTGCCTGTCCCTAGTTGCTCCTTCTCATTTTCCAGCC +
Preference number: 1 (lower is better)
Translates to: LTEAELPCGLCCQRT*LDCLSLVAPSHFPA
Trigger: GGCTGGAAAATGAGAAGGAGCAACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCTTCGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CACTACTGTCTCCTCACCGAAGCAGAGCTTCCCTGTGGTCTTTGTTaGCAGCGTACCTGCCTGGATTGCCTGTCCCTAGTTGCTCCTTCT +
Preference number: 1 (lower is better)
Translates to: HYCLLTEAELPCGLC*QRTCLDCLSLVAPS
Trigger: AGAAGGAGCAACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCTTCGGTGAGGAGACAGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp TCGCTCTGTCTCACTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCCTC +
Preference number: 1 (lower is better)
Translates to: SLCLTYCPETPGGGR*SIIHQSFFIFYHLL
Trigger: GAGGAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR CCA 90 bp GGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAATTCCATCAAGTTATGGGTAGCATG +
Preference number: 1 (lower is better)
Translates to: GLFLKSAITQGRWYP*VPGYQQFHQVMGSM
Trigger: CATGCTACCCATAACTTGATGGAATTGTTGATAGCCAGGCACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 90 bp CTGCACCTATTTATCTGCCCTCTTAGTTCCCTCTCCTTACTCCCCTaGCCCAACAAGCCCTGGTGTGTGTGTTGTTCCCTTCTTTGTGTC +
Preference number: 1 (lower is better)
Translates to: LHLFICPLSSLSLLP*PNKPWCVCCSLLCV
Trigger: GACACAAAGAAGGGAACAACACACACACCAGGGCTTGTTGGGGCAGGGGAGTAAGGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp ACACAGGTATCCATGTGCCATGGTAGTTTGCTGCACCTATTTATCTaGCCTCTTAGTTCCCTCTCCTTACTCCCCTGCCCCAACAAGCCC +
Preference number: 1 (lower is better)
Translates to: TQVSMCHGSLLHLFI*PLSSLSLLPCPNKP
Trigger: GGGCTTGTTGGGGCAGGGGAGTAAGGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 90 bp CAGCTGTTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGCTATCAACAATTCCATCAAGTTATG +
Preference number: 1 (lower is better)
Translates to: QLFGLFLKSAITQGR*YPWVPGYQQFHQVM
Trigger: CATAACTTGATGGAATTGTTGATAGCCAGGCACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 90 bp CCAATTGACAGCCTCTCTTTGGTAGGGTCTCAACACAGGGATCAATaGAGGATGCTGGACATCCACTTGGATGGACTGCGTTTCTTGCTG +
Preference number: 1 (lower is better)
Translates to: PIDSLSLVGSQHRDQ*RMLDIHLDGLRFLL
Trigger: CAGCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR GCA 90 bp ACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTTaGAGACTCAATAACATTACGAGATGGAGGTCCCTCCAGGTTTTT +
Preference number: 1 (lower is better)
Translates to: TAVERKSGWSEVTDC*RLNNITRWRSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 90 bp GACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTACTGTGATGCATaGTGTCACCTAAGGGTGAGCCACCTCTTCTTAGCCACAAAGGCC +
Preference number: 1 (lower is better)
Translates to: DTAVLSYASSLYCDA*CHLRVSHLFLATKA
Trigger: GGCCTTTGTGGCTAAGAAGAGGTGGCTCACCCTTAGGTGACAGCATGCATCACAGTACAAGGAACTGGCATAAGAAAGAACTGCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp GCCAAATGTAAGACACAGGGAACAAGACATGTGGGCCATATGTTCTaGCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCA +
Preference number: 1 (lower is better)
Translates to: AKCKTQGTRHVGHMF*QEAYFTIQNAWQLS
Trigger: TGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACATGTCTTGTTCCCTGTGTCTTACATTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp TTACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTaGCAGACTGTTGCAGACTCAATAACATTACGAGATGGAGGTCCC +
Preference number: 1 (lower is better)
Translates to: LQKTQQLRGSLAGRR*QTVADSITLRDGGP
Trigger: GGGACCTCCATCTCGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR TCA 90 bp AGAGATGACGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTaGCAGATGGAACTTGGAGAGATGATCAGAGTTGCTCTTGTTGAC +
Preference number: 1 (lower is better)
Translates to: RDDDLTCLLISSTHW*QMELGEMIRVALVD
Trigger: GTCAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCGTCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 90 bp CTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTaGAGAAAAGTGGAGCCAGTGTATTTCTTCGGTTTGTGGTGGTAT +
Preference number: 1 (lower is better)
Translates to: LAAHLMLTVIEMPFH*RKVEPVYFFGLWWY
Trigger: ATACCACCACAAACCGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR TCA 90 bp GTCTCACTGTTTCATCTTCTAGCATCTTTTCTTCTCCACCTCACTTaGGTCACCTACTTCTACAGTCACATCTGGCAGGCCTGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: VSLFHLLASFLLHLT*VTYFYSHIWQACPL
Trigger: GAGAGGACAGGCCTGCCAGATGTGACTGTAGAAGTAGGTGACTCAAGTGAGGTGGAGAAGAAAAGATGCTAGAAGATGAAACAGTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTaGTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTC +
Preference number: 1 (lower is better)
Translates to: QDIKLAGLQQLLYYT*SCSALAAVWPLPQV
Trigger: GACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 90 bp TATGCAGGCTTGTTACACAGGTATCCATGTGCCATGGTAGTTTGCTaGACCTATTTATCTGCCCTCTTAGTTCCCTCTCCTTACTCCCCT +
Preference number: 1 (lower is better)
Translates to: YAGLLHRYPCAMVVC*TYLSALLVPSPYSP
Trigger: AGGGGAGTAAGGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAAGCCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp CTACTTTACCTTCACAGGGATGTCCTCCTCCTGGTTTGCTTTCTCTaGGGTAAAGACATACGAGATTTCTTTGTGAGATGTGGTCTGGCG +
Preference number: 1 (lower is better)
Translates to: LLYLHRDVLLLVCFL*GKDIRDFFVRCGLA
Trigger: CGCCAGACCACATCTCACAAAGAAATCTCGTATGTCTTTACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCCTGTGAAGGTAAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp ACTGCTTTCTCCTTGCTTTCTACACTTCAGCCACTCAGATCCATTTaGGTCCTTGTCTTAGGCTTTTCCATGCACTGGCTCTCTTCTGGT +
Preference number: 1 (lower is better)
Translates to: TAFSLLSTLQPLRSI*VLVLGFSMHWLSSG
Trigger: ACCAGAAGAGAGCCAGTGCATGGAAAAGCCTAAGACAAGGACTCAAATGGATCTGAGTGGCTGAAGTGTAGAAAGCAAGGAGAAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp GAATATGCAGGCTTGTTACACAGGTATCCATGTGCCATGGTAGTTTaGTGCACCTATTTATCTGCCCTCTTAGTTCCCTCTCCTTACTCC +
Preference number: 1 (lower is better)
Translates to: EYAGLLHRYPCAMVV*CTYLSALLVPSPYS
Trigger: GGAGTAAGGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAAGCCTGCATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CCTTCAACATCTGGTCCCCTAGTTAGGTCTCCAGGCTTATTCAACTaGTTTCTCCTTGCTTTCTACACTTCAGCCACTCAGATCCATTTG +
Preference number: 1 (lower is better)
Translates to: PSTSGPLVRSPGLFN*FLLAFYTSATQIHL
Trigger: CAAATGGATCTGAGTGGCTGAAGTGTAGAAAGCAAGGAGAAAGCAGTTGAATAAGCCTGGAGACCTAACTAGGGGACCAGATGTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp TCCTGGTTTGCTTTCTCTGAGGTAAAGACATACGAGATTTCTTTGTaGGATGTGGTCTGGCGGCAGATTGCACACTTAATGGAGCTTCTG +
Preference number: 1 (lower is better)
Translates to: SWFAFSEVKTYEISL*DVVWRQIAHLMELL
Trigger: CAGAAGCTCCATTAAGTGTGCAATCTGCCGCCAGACCACATCTCACAAAGAAATCTCGTATGTCTTTACCTCAGAGAAAGCAAACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp GAACCTGGCTATCTTCTAAGCATACTGGTCTCTCAGCAGCCCTTTTaGGTGAAGGATTTGACTGTTGCATTTGAGTGCTGGTCCACAAAT +
Preference number: 1 (lower is better)
Translates to: EPGYLLSILVSQQPF*VKDLTVAFECWSTN
Trigger: ATTTGTGGACCAGCACTCAAATGCAACAGTCAAATCCTTCACTCAAAAGGGCTGCTGAGAGACCAGTATGCTTAGAAGATAGCCAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CCATATAGCGCTTCTGGTTCCGTAGGCGACGCCCATCCTCACTATTaGTATGTGGGATATCGACATAATTTAATTCTGAACGCAGTACAT +
Preference number: 1 (lower is better)
Translates to: PYSASGSVGDAHPHY*YVGYRHNLILNAVH
Trigger: ATGTACTGCGTTCAGAATTAAATTATGTCGATATCCCACATAGCAATAGTGAGGATGGGCGTCGCCTACGGAACCAGAAGCGCTATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp AAAGACATACGAGATTTCTTTGTGAGATGTGGTCTGGCGGCAGATTaGACACTTAATGGAGCTTCTGTGAGATCCCACGCTGTATTGTTC +
Preference number: 1 (lower is better)
Translates to: KDIRDFFVRCGLAAD*TLNGASVRSHAVLF
Trigger: GAACAATACAGCGTGGGATCTCACAGAAGCTCCATTAAGTGTGCAATCTGCCGCCAGACCACATCTCACAAAGAAATCTCGTATGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CAGCCAAATCAAAGCCACCATTACTCCTGCTGTAGCCTCCTAAGCTaGTCTCTCCAAATTTCTTCTGCTCTATTCTGTTCCTCATCATCT +
Preference number: 1 (lower is better)
Translates to: QPNQSHHYSCCSLLS*SLQISSALFCSSSS
Trigger: AGATGATGAGGAACAGAATAGAGCAGAAGAAATTTGGAGAGAGCAGCTTAGGAGGCTACAGCAGGAGTAATGGTGGCTTTGATTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 90 bp GTCTCAACACAGGGATCAATGCAGGATGCTGGACATCCACTTGGATaGACTGCGTTTCTTGCTGATGTGTTTGTTTCACAAAGTGATACA +
Preference number: 1 (lower is better)
Translates to: VSTQGSMQDAGHPLG*TAFLADVFVSQSDT
Trigger: TGTATCACTTTGTGAAACAAACACATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR TCA 90 bp AAAGTCATCAGTGACCTCATTAGACAAATTAGTCCACATTGTAGTTaGTCCACCTTCAGCACTACTGTCTCCTCACCGAAGCAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: KVISDLIRQISPHCS*STFSTTVSSPKQSF
Trigger: GAAGCTCTGCTTCGGTGAGGAGACAGTAGTGCTGAAGGTGGATCAACTACAATGTGGACTAATTTGTCTAATGAGGTCACTGATGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp GGATACATGTACAGAATATGCAGGCTTGTTACACAGGTATCCATGTaGCATGGTAGTTTGCTGCACCTATTTATCTGCCCTCTTAGTTCC +
Preference number: 1 (lower is better)
Translates to: GYMYRICRLVTQVSM*HGSLLHLFICPLSS
Trigger: GGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAAGCCTGCATATTCTGTACATGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp TCTTCTTGCAGTAAGGCCGATAGAGAAGTCGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATACCAAGAAAGACCACTAACCCAAAAA +
Preference number: 1 (lower is better)
Translates to: SSCSKADREVEPTSV*HSKVQYQERPLTQK
Trigger: TTTTTGGGTTAGTGGTCTTTCTTGGTATTGAACCTTACTGTGTCAAACACTGGTGGGTTCGACTTCTCTATCGGCCTTACTGCAAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR TCA 90 bp CTGCTTCCTATATTATATTGCCTTACCTATGCTTCTATGTGTTCCTaGCCTACTTTACCTTCACAGGGATGTCCTCCTCCTGGTTTGCTT +
Preference number: 1 (lower is better)
Translates to: LLPILYCLTYASMCS*PTLPSQGCPPPGLL
Trigger: AAGCAAACCAGGAGGAGGACATCCCTGTGAAGGTAAAGTAGGTCAGGAACACATAGAAGCATAGGTAAGGCAATATAATATAGGAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CTCTCATCACGTATCCTTGCCTGTTCTGTTATTCCCATACTGTCCTaGACTTCCTTCCTGCTTGTTTACCCTCTAATTTTTCTCCTTTCA +
Preference number: 1 (lower is better)
Translates to: LSSRILACSVIPILS*TSFLLVYPLIFLLS
Trigger: TGAAAGGAGAAAAATTAGAGGGTAAACAAGCAGGAAGGAAGTGCAGGACAGTATGGGAATAACAGAACAGGCAAGGATACGTGATGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp GTAATGGGATTGCTGGGTCCTATGGGATTTCTGTTTCTAGATCCTTaGGGAATCGCCATACTGTCTTCCACAATGGTTGCACTAATTTAT +
Preference number: 1 (lower is better)
Translates to: VMGLLGPMGFLFLDP*GIAILSSTMVALIY
Trigger: ATAAATTAGTGCAACCATTGTGGAAGACAGTATGGCGATTCCTCAAGGATCTAGAAACAGAAATCCCATAGGACCCAGCAATCCCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CTAAGTGCAGGCAGGATAAAGAATAACTGTCAAATGCCTCAGGGCTaGACCATAAGTCACCTACTTCTTCCTTCAATAACTCTTTGGTAT +
Preference number: 1 (lower is better)
Translates to: LSAGRIKNNCQMPQG*TISHLLLPSITLWY
Trigger: ATACCAAAGAGTTATTGAAGGAAGAAGTAGGTGACTTATGGTGCAGCCCTGAGGCATTTGACAGTTATTCTTTATCCTGCCTGCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp TTAAAGGGACTCATGGTATTAGAAGGTGGTACATCACTATCAGCATaGTTTAGAGATTCAGCACAGTCCTCTGTTTCATGTTCTTGGTTG +
Preference number: 1 (lower is better)
Translates to: LKGLMVLEGGTSLSA*FRDSAQSSVSCSWL
Trigger: CAACCAAGAACATGAAACAGAGGACTGTGCTGAATCTCTAAATCATGCTGATAGTGATGTACCACCTTCTAATACCATGAGTCCCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp AAAGTAGTAACCATATCTGTTTTATTTATGTGTATGCTGTGTCTATaGGGCCTAGCACACTGCCTGTGTGCTAGTACGTGTCCAATATAT +
Preference number: 1 (lower is better)
Translates to: KVVTISVLFMCMLCL*GLAHCLCASTCPIY
Trigger: ATATATTGGACACGTACTAGCACACAGGCAGTGTGCTAGGCCTCATAGACACAGCATACACATAAATAAAACAGATATGGTTACTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp AGAAATGGTCTTCAACTTAAGTGCATCCACCGAACAGGACATTTGTaGTCCCAGTATTCATTTTATATCTATGGTCAATCAACAGCATTC +
Preference number: 1 (lower is better)
Translates to: RNGLQLKCIHRTGHL*SQYSFYIYGQSTAF
Trigger: GAATGCTGTTGATTGACCATAGATATAAAATGAATACTGGGATCACAAATGTCCTGTTCGGTGGATGCACTTAAGTTGAAGACCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp TTTAATGCAGCTACAGTTTTCTTGGGAGAAGGGTACCCTAATAACTaGTTAACTACTGGTAGTGAATTTCAACTTGTAGCTGATTCTACT +
Preference number: 1 (lower is better)
Translates to: FNAATVFLGEGYPNN*LTTGSEFQLVADST
Trigger: AGTAGAATCAGCTACAAGTTGAAATTCACTACCAGTAGTTAAGCAGTTATTAGGGTACCCTTCTCCCAAGAAAACTGTAGCTGCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp CCCTACACATCATTGCATTTGCGTGGATTCAATGTAAACTCAGCATaGTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTT +
Preference number: 1 (lower is better)
Translates to: PYTSLHLRGFNVNSA*CKFKFCSLELHGIF
Trigger: AAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATGCAATGATGTGTAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 90 bp AAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTaGACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTA +
Preference number: 1 (lower is better)
Translates to: KKKHFVIITCNDLLM*TWHSLVQKVKDSCL
Trigger: TAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR GCA 90 bp GCTTATCACAATTATAACACATTATTTATTAACATCTGTGCTTCCTaGCCCAACTCAAACTCCTTCACCAATCTCCACAAAAGTAGTAAC +
Preference number: 1 (lower is better)
Translates to: AYHNYNTLFINICAS*PNSNSFTNLHKSSN
Trigger: GTTACTACTTTTGTGGAGATTGGTGAAGGAGTTTGAGTTGGGGCAGGAAGCACAGATGTTAATAAATAATGTGTTATAATTGTGATAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 90 bp GCAACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATTCAACATCAAACCTATGTGATTTTG +
Preference number: 1 (lower is better)
Translates to: ATYIPSSMLQRDPLK*FLHQQIQHQTYVIL
Trigger: CAAAATCACATAGGTTTGATGTTGAATTTGTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 90 bp TACACATCATTGCATTTGCGTGGATTCAATGTAAACTCAGCATGCTaGAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTT +
Preference number: 1 (lower is better)
Translates to: YTSLHLRGFNVNSAC*KFKFCSLELHGIFL
Trigger: AAGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATGCAATGATGTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 90 bp CCACCGAACAGGACATTTGTGATCCCAGTATTCATTTTATATCTATaGTCAATCAACAGCATTCCTTACATTGTAAAATCTCTTATTTCC +
Preference number: 1 (lower is better)
Translates to: PPNRTFVIPVFILYL*SINSIPYIVKSLIS
Trigger: GGAAATAAGAGATTTTACAATGTAAGGAATGCTGTTGATTGACCATAGATATAAAATGAATACTGGGATCACAAATGTCCTGTTCGGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp TCAGCACTACTGTCTCCTCACCGAAGCAGAGCTTCCCTGTGGTCTTaGTTGCCAGCGTACCTGCCTGGATTGCCTGTCCCTAGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: SALLSPHRSRASLWS*LPAYLPGLPVPSCS
Trigger: GGAGCAACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCTTCGGTGAGGAGACAGTAGTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCAGAACTGAAGACCTCTaGAATCACGGAACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFRTEDL*NHGTSL
Trigger: CAGAGAAGTTCCGTGATTGCAGAGGTCTTCAGTTCT...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTCTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 2 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 2 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR TCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR TCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 2 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR GCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTAGAACTGAAGACCTCTaGAATCACGGAACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPRTEDL*NHGTSL
Trigger: CAGAGAAGTTCCGTGATTGCAGAGGTCTTCAGTTCT...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 2 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTGAGAGGAAGTCTGGCTaGTCGGAGGTGACAGACTGT +
Preference number: 2 (lower is better)
Translates to: AICSARRPTSPSKMPGSCERKSG*SEVTDC
Trigger: ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTC...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp ACTCCCCTGCCCCAACAAGCCCTGGTGTGTGTGTTGTTCCCTTCTTaGTGTCCATGTGTTCTCAGTGTTCAACTCCCACTTACGAGTGAG +
Preference number: 2 (lower is better)
Translates to: TPLPQQALVCVLFPS*CPCVLSVQLPLTSE
Trigger: CTCACTCGTAAGTGGGAGTTGAACACTGAGAACACATGGACACAAAGAAGGGAACAACACACACACCAGGGCTTGTTGGGGCAGGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 2 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAAACATCTGTGCTTCCTaGCCCAACTCAAACTCCTTC +
Preference number: 2 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLANICAS*PNSNSF
Trigger: GAAGGAGTTTGAGTTGGGGCAGGAAGCACAGATGTT...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGATTGGGCAAGGTTCTaGATTAACACCTCCCGATGT +
Preference number: 2 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLADWARF*INTSRC
Trigger: ACATCGGGAGGTGTTAATCCAGAACCTTGCCCAATC...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp CTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTaGTACTGTGATGCATGCTGTCACCTAAGGGTGAGCCACCTCTTC +
Preference number: 2 (lower is better)
Translates to: LCAKPDTAVLSYASS*YCDACCHLRVSHLF
Trigger: GAAGAGGTGGCTCACCCTTAGGTGACAGCATGCATCACAGTACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp CGCAACACTTCTCTGTACAATTCTGCTGCCAAGGCATACTCACCTTCTACCTTTGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 2 (lower is better)
Translates to: RNTSLYNSAAKAYSPSTFDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...AAAGGTAGAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAAGTGTTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCCGAACAGCCTGTGGGTaGCAGCAGGCCTGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICRTACG*QQACLS
Trigger: GCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCG...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR TCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 2 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR GCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGAACACAGGTATCCATGTaGCATGGTAGTTTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: EAYFTIQNAWQLSELARGTQVSM*HGSLLH
Trigger: GTGCAGCAAACTACCATGGCACATGGATACCTGTGT...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCACAACTGCTTTCTCCTTaGTTTCTACACTTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAQLLSP*FLHFSH
Trigger: GTGGCTGAAGTGTAGAAAGCAAGGAGAAAGCAGTTG...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 2 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 2 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 2 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR TCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTTGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 2 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 2 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGATTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 2 (lower is better)
Translates to: EAYFTIQNAWQLSELARGFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp GTAACAATCTCTCGCCATAAGAAGTGCAGGGCACTTTCAGTAGCAGGACTGCTTGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 2 (lower is better)
Translates to: VTISRHKKCRALSVAGLLGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...AAGCAGTCCTGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGAGATTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR CCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGATCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 2 (lower is better)
Translates to: EAYFTIQNAWQLSELARGSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGAGTCCCAGAAAAACCATaGCCTTTGATCTGTTTCACG +
Preference number: 2 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGVPEKP*PLICFT
Trigger: CGTGAAACAGATCAAAGGCCATGGTTTTTCTGGGAC...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGAGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 2 (lower is better)
Translates to: EAYFTIQNAWQLSELARGVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp GGTCTCACTGTTTCATCTTCTAGCATCTTTTCTTCTCCACCTCACTaGAGTCACCTACTTCTACAGTCACATCTGGCAGGCCTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: GLTVSSSSIFSSPPH*SHLLLQSHLAGLSS
Trigger: AGAGGACAGGCCTGCCAGATGTGACTGTAGAAGTAGGTGACTCAAGTGAGGTGGAGAAGAAAAGATGCTAGAAGATGAAACAGTGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp CACCACTTTTCCCTCGGGAAGAGTGAGAGCATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAATCAGAGCCAAAACCTCCACTGTCTT +
Preference number: 2 (lower is better)
Translates to: HHFSLGKSESILLDI*SSMCQNQSQNLHCL
Trigger: AAGACAGTGGAGGTTTTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCCGAGGGAAAAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR TCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 2 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 2 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCGMSSS*FAFSEV
Trigger: TACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCC...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGATTCTTTTTCTCTGTCTaGGAGCCAACCTATTCTCTC +
Preference number: 2 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGFFFSV*EPTYSL
Trigger: GAGAGAATAGGTTGGCTCCCAGACAGAGAAAAAGAA...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp TTCAGACCCTCAGATGTAACAATCTCTCGCCATAAGAAGTGCAGGGCACTTTCATGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: FRPSDVTISRHKKCRALSCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...TGAAAGTGCCCTGCACTTCTTATGGCGAGAGATTGTTACATCTGAGGGTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 90 bp ATGCTGGACATCCACTTGGATGGACTGCGTTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAGCTCGTCAATGTCTTGTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: MLDIHLDGLRFLLMC*FHKVIQLVNVLSLW
Trigger: CCAGAGGGACAAGACATTGACGAGCTGTATCACTTTGTGAAACAAACACATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 2 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAAGGTCAAAGACTCGTaGTTAAGGGAGGAACAACTG +
Preference number: 2 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLKVKDS*LREEQL
Trigger: CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR-3UTR GCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 2 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 2 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLANHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 2 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR GCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCATCTCCAAATTTCTTCTaGTCTATTCTGTTCCTCATC +
Preference number: 2 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLASPNFF*SILFLI
Trigger: GATGAGGAACAGAATAGAGCAGAAGAAATTTGGAGA...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTAGGAGGGATAAAATTTaGCCGCACAATGGTACAATA +
Preference number: 2 (lower is better)
Translates to: AICSARRPTSPSKMPGSCRRDKI*PHNGTI
Trigger: TATTGTACCATTGTGCGGGCAAATTTTATCCCTCCT...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCCTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 2 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 2 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 2 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp AGAATATGCAGGCTTGTTACACAGGTATCCATGTGCCATGGTAGTTaGCTGCACCTATTTATCTGCCCTCTTAGTTCCCTCTCCTTACTC +
Preference number: 2 (lower is better)
Translates to: RICRLVTQVSMCHGS*LHLFICPLSSLSLL
Trigger: GAGTAAGGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAAGCCTGCATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp TTGCTGATGTGTTTGTTTCACAAAGTGATACAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCCTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: LLMCLFHKVIQLVNV*SLWLTLRIIFILFQ
Trigger: TTGGAAGAGGATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTGTGAAACAAACACATCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 90 bp GATCAATGCAGGATGCTGGACATCCACTTGGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCACAAAGTGATACAGCTCGTCAATGTC +
Preference number: 2 (lower is better)
Translates to: DQCRMLDIHLDGLRF*LMCLFHKVIQLVNV
Trigger: GACATTGACGAGCTGTATCACTTTGTGAAACAAACACATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCATCCTGCATTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGAGGAACAACTGGAGTaGAATAACAACTCTACCATG +
Preference number: 2 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLEEQLE*NNNSTM
Trigger: CATGGTAGAGTTGTTATTTCACTCCAGTTGTTCCTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR-3UTR TCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGATTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp AGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCAAGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 2 (lower is better)
Translates to: SESILLDILSSMCQNQSQVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...TTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR GCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 2 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR GCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 2 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACTCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SSVDIILILLMMRGKVNNSTNSL*VTAGLS
Trigger: AGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGA...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR CCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 2 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR GCA 90 bp GCCTGTATATGGATTATAGTAGAGTTTCAGACCCTCAGATGTAACAATCTCTCGCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 2 (lower is better)
Translates to: ACIWIIVEFQTLRCNNLSQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...CGAGAGATTGTTACATCTGAGGGTCTGAAACTCTACTATAATCCATATACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR CCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTGGTGGTATTTGGATTTaGTCAATCACATCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSGGIWI*SITSFF
Trigger: AAAGAAAGATGTGATTGACCAAATCCAAATACCACC...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: TFITMYSDLVAFETHFSFITQGR*YPWVPG
Trigger: GCCAGGCACCCAGGGATACCACCTACCTTGCGTGAT...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 2 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATAACAACTCTACCATaGATTCAGATATCACTGGCT +
Preference number: 2 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLITTLP*IQISLA
Trigger: AGCCAGTGATATCTGAATTCATGGTAGAGTTGTTAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR-3UTR TCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp TTCAGACCCTCAGATGTAACAATCTCTCGCCATAAGAAGTGCAGGGCACTTTCAGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 2 (lower is better)
Translates to: FRPSDVTISRHKKCRALSVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...TGAAAGTGCCCTGCACTTCTTATGGCGAGAGATTGTTACATCTGAGGGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR GCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 2 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACTCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 2 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 2 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR CAA 90 bp ATAATTCACACACTTTGCATGTTGCCACAGGTGACACTTCAGGCATaGAACACGAGGCTTACGATCTATCTGATCAAGTTCACCACATAT +
Preference number: 2 (lower is better)
Translates to: IIHTLCMLPQVTLQA*NTRLTIYLIKFTTY
Trigger: ATATGTGGTGAACTTGATCAGATAGATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTGAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp AGTAATGGGATTGCTGGGTCCTATGGGATTTCTGTTTCTAGATCCTaGAGGAATCGCCATACTGTCTTCCACAATGGTTGCACTAATTTA +
Preference number: 2 (lower is better)
Translates to: SNGIAGSYGISVSRS*RNRHTVFHNGCTNL
Trigger: TAAATTAGTGCAACCATTGTGGAAGACAGTATGGCGATTCCTCAAGGATCTAGAAACAGAAATCCCATAGGACCCAGCAATCCCATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 90 bp AGGTTTCAGAGCATTAGTTCTCATTTGTGTAACAACTTCCATTTTTaGAGCCCCCTGAAGCCCAGTTATCCCAACTCTACCCTTTGCTAT +
Preference number: 2 (lower is better)
Translates to: RFQSISSHLCNNFHF*SPLKPSYPNSTLCY
Trigger: ATAGCAAAGGGTAGAGTTGGGATAACTGGGCTTCAGGGGGCTCAAAAAATGGAAGTTGTTACACAAATGAGAACTAATGCTCTGAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 2 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACAAAAACCATGGCCTTTaGTCTGTTTCACGAGACCTT +
Preference number: 2 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHKNHGL*SVSRDL
Trigger: AAGGTCTCGTGAAACAGATCAAAGGCCATGGTTTTT...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGCTAGTAGCTGGACAGTaGCCTTGTGAATCGGGATTG +
Preference number: 2 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQLVAGQ*PCESGL
Trigger: CAATCCCGATTCACAAGGTCACTGTCCAGCTACTAG...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 2 (lower is better)
Translates to: VCCTGYKACWASATSVLHNHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR GCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 2 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACTCTGTACAATTCTGCTaGCAAGGCATACTCACCTTT +
Preference number: 2 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHSVQFC*QGILTF
Trigger: AAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGA...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp TATCATCACACGTGTAGGAGGGCATTGAACTTTTTCTTTTGGTTCAAATTCGATATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: YHHTCRRALNFFFWFKFDIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...ATCGAATTTGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGTGTGATGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR CCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 2 (lower is better)
Translates to: VCCTGYKACWASATSVLHYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 2 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR CCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACTTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 2 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 2 (lower is better)
Translates to: TFITMYSDLVAFETHFSFGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR TCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGAGTGTGGTATTATTTCTaGGGTCTCTGTTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGVWYYF*GLCSAP
Trigger: TGGAGCAGAACAGAGACCTCAGAAATAATACCACAC...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTATTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 2 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAATCTACAGACAACAGTaGCGTCTACCTATTCACTGT +
Preference number: 2 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVIYRQQ*RLPIHC
Trigger: ACAGTGAATAGGTAGACGCCACTGTTGTCTGTAGAT...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 2 (lower is better)
Translates to: SSVDIILILLMMRGKVNNEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR TCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 2 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 2 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR TCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTTGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 2 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNICGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACCTGTCAAGCTTGTTCTaGTGTTCATGCTTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHLSSLF*CSCFLN
Trigger: ATTAAGAAAGCATGAACATCAGAACAAGCTTGACAG...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR TCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 2 (lower is better)
Translates to: TFITMYSDLVAFETHFSFSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCGTTGTAAGTAAGAACTaGAGACCTCTGCAATCACGG +
Preference number: 2 (lower is better)
Translates to: TFITMYSDLVAFETHFSFVVSKN*RPLQSR
Trigger: CCGTGATTGCAGAGGTCTTCAGTTCTTACTTACAAC...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGAACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 2 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 2 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 2 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTTTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 2 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTATAATTCACACACTTTaGATGTTGCCACAGGTGACA +
Preference number: 2 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIIIHTL*MLPQVT
Trigger: TGTCACCTGTGGCAACATGCAAAGTGTGTGAATTAT...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCAAGGAGTCACTAAAGTaGTTTATGATAATGCAGCAT +
Preference number: 2 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICKESLK*FMIMQH
Trigger: ATGCTGCATTATCATAAACCACTTTAGTGACTCCTT...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR TCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 2 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR CAA 90 bp TTATACCAGTTTCCAGAAGAATTCAAATCTATATCTTGTCCTCACTaGCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGT +
Preference number: 2 (lower is better)
Translates to: LYQFPEEFKSISCPH*PYPNIYYYILPLEG
Trigger: ACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGCAAGTGAGGACAAGATATAGATTTGAATTCTTCTGGAAACTGGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR GCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTTTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 2 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR GCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTTGCAAATTCAAGTTCTaGTCTTTAGAACTTCATGGA +
Preference number: 2 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNICKFKF*SLELHG
Trigger: TCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCA...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: TFITMYSDLVAFETHFSFNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR CCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATAAGGAGTCACTAAAGTaGTTTATGATAATGCAGCAT +
Preference number: 2 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHKESLK*FMIMQH
Trigger: ATGCTGCATTATCATAAACCACTTTAGTGACTCCTT...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR CAA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 3 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR TCA 72 bp TGGAGTGGCAAGAACTCTCCACGAACAGCCTGTGGGTaGCAGCAGGCCTGTCTGAGCCTCAGCAATGGATAC +
Preference number: 3 (lower is better)
Translates to: WSGKNSPRTACG*QQACLSLSNGY
Trigger: GTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR GCA 72 bp CTCCTCACCGAAGCAGAGCTTCCCTGTGGTCTTTGTTaGCAGCGTACCTGCCTGGATTGCCTGTCCCTAGTT +
Preference number: 3 (lower is better)
Translates to: LLTEAELPCGLC*QRTCLDCLSLV
Trigger: AACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCTTCGGTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp GCACTACTGTCTCCTCACCGAAGCAGAGCTTCCCTGTaGTCTTTGTTGCCAGCGTACCTGCCTGGATTGCCT +
Preference number: 3 (lower is better)
Translates to: ALLSPHRSRASL*SLLPAYLPGLP
Trigger: AGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCTTCGGTGAGGAGACAGTAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTGTCATGGTGCCTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 3 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPVMVPF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGGCACCATGAC...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR GCA 72 bp GCAGAGCTTCCCTGTGGTCTTTGTTGCCAGCGTACCTaGCTGGATTGCCTGTCCCTAGTTGCTCCTTCTCAT +
Preference number: 3 (lower is better)
Translates to: AELPCGLCCQRT*LDCLSLVAPSH
Trigger: ATGAGAAGGAGCAACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACAAAGACCACAGGGAAGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp TTTTTGGAGTGGCAAGAACTCTCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCTGAGCCTCAGCAATGG +
Preference number: 3 (lower is better)
Translates to: FLEWQELSTNSL*VTAGLSEPQQW
Trigger: CCATTGCTGAGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCACTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR CCA 72 bp GGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGCTATCAACAATTCCAT +
Preference number: 3 (lower is better)
Translates to: GLFLKSAITQGR*YPWVPGYQQFH
Trigger: ATGGAATTGTTGATAGCCAGGCACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR CCA 72 bp GGTGAGCCACCTCTTCTTAGCCACAAAGGCCATCTGTaGCCCTTGAGATGCTGTGGCCAGAGGAAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: GEPPLLSHKGHL*PLRCCGQRKRK
Trigger: CTTTCTCTTCCTCTGGCCACAGCATCTCAAGGGCCACAGATGGCCTTTGTGGCTAAGAAGAGGTGGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 3 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CAA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 3 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CAA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTTCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 3 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPSELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp CTCACTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCCTTCTTCATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: LTYCPETPGGGR*SIIHQSFFIFY
Trigger: ATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 72 bp TTTATCTGCCCTCTTAGTTCCCTCTCCTTACTCCCCTaGCCCAACAAGCCCTGGTGTGTGTGTTGTTCCCTT +
Preference number: 3 (lower is better)
Translates to: FICPLSSLSLLP*PNKPWCVCCSL
Trigger: AAGGGAACAACACACACACCAGGGCTTGTTGGGGCAGGGGAGTAAGGAGAGGGAACTAAGAGGGCAGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TTGCCAGCGTACCTGCCTGGATTGCCTGTCCCTAGTTaGTCCTTCTCATTTTCCAGCCCTCCCAACTTGATT +
Preference number: 3 (lower is better)
Translates to: LPAYLPGLPVPS*SFSFSSPPNLI
Trigger: AATCAAGTTGGGAGGGCTGGAAAATGAGAAGGAGCAACTAGGGACAGGCAATCCAGGCAGGTACGCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp AGCCTCTCTTTGGTAGGGTCTCAACACAGGGATCAATaGAGGATGCTGGACATCCACTTGGATGGACTGCGT +
Preference number: 3 (lower is better)
Translates to: SLSLVGSQHRDQ*RMLDIHLDGLR
Trigger: ACGCAGTCCATCCAAGTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTGAGACCCTACCAAAGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR CAA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 3 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CAA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 3 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR-3UTR CAA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGCAGCTACAGTTTTCTaGGGAGAAGGGTACCCTAAT +
Preference number: 3 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAAATVF*GEGYPN
Trigger: ATTAGGGTACCCTTCTCCCAAGAAAACTGTAGCTGC...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp CCAAGACTCGAAGAGATGACGACCTCACATGCCTGTTaGTCTCATCCACCCACTGGTGACAGATGGAACTTG +
Preference number: 3 (lower is better)
Translates to: PRLEEMTTSHAC*SHPPTGDRWNL
Trigger: CAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp AGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCCATCAAGTTATGGGTA +
Preference number: 3 (lower is better)
Translates to: SRPSRKVGGIPG*LAINNSIKLWV
Trigger: TACCCATAACTTGATGGAATTGTTGATAGCCAGGCACCCAGGGATACCACCTACCTTGCGTGATGGCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 72 bp AAGACACAGGGAACAAGACATGTGGGCCATATGTTCTaGCAGGAGGCCTACTTCACCATCCAAAATGCCTGG +
Preference number: 3 (lower is better)
Translates to: KTQGTRHVGHMF*QEAYFTIQNAW
Trigger: CCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACATGTCTTGTTCCCTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp CTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAATTCCATCAAGTTATG +
Preference number: 3 (lower is better)
Translates to: LKSAITQGRWYP*VPGYQQFHQVM
Trigger: CATAACTTGATGGAATTGTTGATAGCCAGGCACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR TCA 72 bp GACCTCACATGCCTGTTGATCTCATCCACCCACTGGTaGCAGATGGAACTTGGAGAGATGATCAGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: DLTCLLISSTHW*QMELGEMIRVA
Trigger: AGCAACTCTGATCATCTCTCCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 3 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATCACACACTTTGCATGTaGCCACAGGTGACACTTCAG +
Preference number: 3 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYHTLCM*PQVTLQ
Trigger: CTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTG...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGATATGCAGTAATGGGATaGCTGGGTCCTATGGGATTT +
Preference number: 3 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGYAVMG*LGPMGF
Trigger: AAATCCCATAGGACCCAGCAATCCCATTACTGCATA...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGAATGTGCCATGGTAGTTaGCTGCACCTATTTATCTGC +
Preference number: 3 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGMCHGS*LHLFIC
Trigger: GCAGATAAATAGGTGCAGCAAACTACCATGGCACAT...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp AGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCAAAACCTCCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 3 (lower is better)
Translates to: SILLDILSSMCQNQSQNLQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...GAGGTTTTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR TCA 72 bp ATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTaGGCTTCATCAAGGCAGATCCTCCACCACTCCACA +
Preference number: 3 (lower is better)
Translates to: ISAAFTVGHSTI*ASSRQILHHST
Trigger: TGTGGAGTGGTGGAGGATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR TCA 72 bp CATCCACCCACTGGTGACAGATGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTGACACTGGTTCCATTG +
Preference number: 3 (lower is better)
Translates to: HPPTGDRWNLER*SELLLLTLVPL
Trigger: CAATGGAACCAGTGTCAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCATCTGTCACCAGTGGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TCTGGTCCCCTAGTTAGGTCTCCAGGCTTATTCAACTaGTTTCTCCTTGCTTTCTACACTTCAGCCACTCAG +
Preference number: 3 (lower is better)
Translates to: SGPLVRSPGLFN*FLLAFYTSATQ
Trigger: CTGAGTGGCTGAAGTGTAGAAAGCAAGGAGAAAGCAGTTGAATAAGCCTGGAGACCTAACTAGGGGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TACCGCCATCAGCCAAATCAAAGCCACCATTACTCCTaGTGTAGCCTCCTAAGCTGCTCTCTCCAAATTTCT +
Preference number: 3 (lower is better)
Translates to: YRHQPNQSHHYS*CSLLSCSLQIS
Trigger: AGAAATTTGGAGAGAGCAGCTTAGGAGGCTACAGCAGGAGTAATGGTGGCTTTGATTTGGCTGATGGCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp GTTCTTTCTTATGCCAGTTCCTTGTACTGTGATGCATaGTGTCACCTAAGGGTGAGCCACCTCTTCTTAGCC +
Preference number: 3 (lower is better)
Translates to: VLSYASSLYCDA*CHLRVSHLFLA
Trigger: GGCTAAGAAGAGGTGGCTCACCCTTAGGTGACAGCATGCATCACAGTACAAGGAACTGGCATAAGAAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp CCACTGATACACCATCGATTAATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTTACTGTGGGACACTCA +
Preference number: 3 (lower is better)
Translates to: PLIHHRLIPLKR*AISAAFTVGHS
Trigger: TGAGTGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR CCA 72 bp CACAAAGTGATACAGCTCGTCAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATCTTCATCCTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: HKVIQLVNVLSL*LTLRIIFILFQ
Trigger: TTGGAAGAGGATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR CAA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 3 (lower is better)
Translates to: VCCTGYKACWASATSVLHRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CAA 90 bp AGAGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 3 (lower is better)
Translates to: RVRASCLTSCRVCVRIRAIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...GGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR-3UTR CAA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGATCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 3 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAGACCTCACATGCCTGTaGATCTCATCCACCCACTGG +
Preference number: 3 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVDLTCL*ISSTHW
Trigger: CCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp AGCTCATGGATGGTCTGCTGCACAGGATATAAAGCTTaGTGGGCTTCAGCAACTTCTGTATTACACTTGCTC +
Preference number: 3 (lower is better)
Translates to: SSWMVCCTGYKA*WASATSVLHLL
Trigger: GAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCCATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 72 bp GGCTTGTTACACAGGTATCCATGTGCCATGGTAGTTTaGTGCACCTATTTATCTGCCCTCTTAGTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: GLLHRYPCAMVV*CTYLSALLVPS
Trigger: AGAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp CAAAGCCACCATTACTCCTGCTGTAGCCTCCTAAGCTaGTCTCTCCAAATTTCTTCTGCTCTATTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: QSHHYSCCSLLS*SLQISSALFCS
Trigger: GGAACAGAATAGAGCAGAAGAAATTTGGAGAGAGCAGCTTAGGAGGCTACAGCAGGAGTAATGGTGGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp AGACCCTCAGATGTAACAATCTCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCAGGACTGCTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: RPSDVTISRHKK*RALSVAGLLLK
Trigger: TTTCAGAAGCAGTCCTGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGAGATTGTTACATCTGAGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CCA 72 bp CACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTaGAGAAAAGTGGAGCCAGTGTATTTCTTCGGTTTG +
Preference number: 3 (lower is better)
Translates to: HLMLTVIEMPFH*RKVEPVYFFGL
Trigger: CAAACCGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR CCA 72 bp TTTACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTaGTCGGAGGTGACAGACTGTTGCAGACTCAATAAC +
Preference number: 3 (lower is better)
Translates to: FTKDTAVERKSG*SEVTDCCRLNN
Trigger: GTTATTGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR CCA 72 bp GCTGAGGCTTTCAGGCAGTGTATCTACAGACAACAGTaGCGTCTACCTATTCACTGTCAAGCTTGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: AEAFRQCIYRQQ*RLPIHCQACSD
Trigger: ATCAGAACAAGCTTGACAGTGAATAGGTAGACGCCACTGTTGTCTGTAGATACACTGCCTGAAAGCCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp TGCACTGGCTCTCTTCTGGTTTTCTTTTTCTCTGTCTaGGAGCCAACCTATTCTCTCCTCAGGCTGACTAAT +
Preference number: 3 (lower is better)
Translates to: CTGSLLVFFFSV*EPTYSLLRLTN
Trigger: ATTAGTCAGCCTGAGGAGAGAATAGGTTGGCTCCCAGACAGAGAAAAAGAAAACCAGAAGAGAGCCAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp TTTCTTCACTCCTTGATATACCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTTGATCTCATCCACCCA +
Preference number: 3 (lower is better)
Translates to: FLHSLIYQDSKR*RPHMPVDLIHP
Trigger: TGGGTGGATGAGATCAACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp TTGCTGGGTCCTATGGGATTTCTGTTTCTAGATCCTTaGGGAATCGCCATACTGTCTTCCACAATGGTTGCA +
Preference number: 3 (lower is better)
Translates to: LLGPMGFLFLDP*GIAILSSTMVA
Trigger: TGCAACCATTGTGGAAGACAGTATGGCGATTCCTCAAGGATCTAGAAACAGAAATCCCATAGGACCCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp TTTCATCTTCTAGCATCTTTTCTTCTCCACCTCACTTaGGTCACCTACTTCTACAGTCACATCTGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: FHLLASFLLHLT*VTYFYSHIWQA
Trigger: GGCCTGCCAGATGTGACTGTAGAAGTAGGTGACTCAAGTGAGGTGGAGAAGAAAAGATGCTAGAAGATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp GCTTCTGGTTCCGTAGGCGACGCCCATCCTCACTATTaGTATGTGGGATATCGACATAATTTAATTCTGAAC +
Preference number: 3 (lower is better)
Translates to: ASGSVGDAHPHY*YVGYRHNLILN
Trigger: GTTCAGAATTAAATTATGTCGATATCCCACATAGCAATAGTGAGGATGGGCGTCGCCTACGGAACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR GCA 72 bp TTGTTACACAGGTATCCATGTGCCATGGTAGTTTGCTaGACCTATTTATCTGCCCTCTTAGTTCCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: LLHRYPCAMVVC*TYLSALLVPSP
Trigger: AGGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TTCACCACTTTTCCCTCGGGAAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTATGTGTCAGAATCAGA +
Preference number: 3 (lower is better)
Translates to: FTTFPSGRVRAS*LTSCRVCVRIR
Trigger: TCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCCGAGGGAAAAGTGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CCA 72 bp TCATGGATGGTCTGCTGCACAGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTATTACACTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: SWMVCCTGYKAC*ASATSVLHLLM
Trigger: CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR CCA 72 bp CTGACCTACTTTACCTTCACAGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTAAAGACATACGAGATT +
Preference number: 3 (lower is better)
Translates to: LTYFTFTGMSSS*FAFSEVKTYEI
Trigger: AATCTCGTATGTCTTTACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCCTGTGAAGGTAAAGTAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp TACTTCTACAGTCACATCTGGCAGGCCTGTCCTCTCTaGAATGACTATGATCTCCCATTCTCAGATAAGAAC +
Preference number: 3 (lower is better)
Translates to: YFYSHIWQACPL*NDYDLPFSDKN
Trigger: GTTCTTATCTGAGAATGGGAGATCATAGTCATTCCAGAGAGGACAGGCCTGCCAGATGTGACTGTAGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCTGCTCTCGCAGCTGTTaGGCCTCTTCCTCAAGTCGG +
Preference number: 3 (lower is better)
Translates to: TFITMYSDLVAFETHFSFCSRSC*ASSSSR
Trigger: CCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCA...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR CAA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 3 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTCCTCTGTCAGATGGGTaGATTGCAAAAATTTTCTCC +
Preference number: 3 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCPLSDG*IAKIFS
Trigger: GGAGAAAATTTTTGCAATCAACCCATCTGACAGAGG...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp AGTAAGGCCGATAGAGAAGTCGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATACCAAGAAAGACCACTA +
Preference number: 3 (lower is better)
Translates to: SKADREVEPTSV*HSKVQYQERPL
Trigger: TAGTGGTCTTTCTTGGTATTGAACCTTACTGTGTCAAACACTGGTGGGTTCGACTTCTCTATCGGCCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR TCA 72 bp TATCTTCTAAGCATACTGGTCTCTCAGCAGCCCTTTTaGGTGAAGGATTTGACTGTTGCATTTGAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: YLLSILVSQQPF*VKDLTVAFECW
Trigger: CCAGCACTCAAATGCAACAGTCAAATCCTTCACTCAAAAGGGCTGCTGAGAGACCAGTATGCTTAGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp AGAGCAATCACTTCCTTAACCTCTCTGCGCAAAACCTaGCACAGCAGTTCTTTCTTATGCCAGTTCCTTGTA +
Preference number: 3 (lower is better)
Translates to: RAITSLTSLRKT*HSSSFLCQFLV
Trigger: TACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTTAAGGAAGTGATTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp AGCCCCCTGAAGCCCAGTTATCCCAACTCTACCCTTTaGTATAATTTATTGAACCCTACCCTACATTCACTA +
Preference number: 3 (lower is better)
Translates to: SPLKPSYPNSTL*YNLLNPTLHSL
Trigger: TAGTGAATGTAGGGTAGGGTTCAATAAATTATAGCAAAGGGTAGAGTTGGGATAACTGGGCTTCAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp TCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTaGAACCCGTATTTTATGAAACAAATTGTTTCATAT +
Preference number: 3 (lower is better)
Translates to: SPFTPGPFTGAP*NPYFMKQIVSY
Trigger: ATATGAAACAATTTGTTTCATAAAATACGGGTTCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATAAGACTCCTGTTCCGTaGAACATCGTATCTATATAT +
Preference number: 3 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYKTPVP*NIVSIY
Trigger: ATATATAGATACGATGTTCAACGGAACAGGAGTCTT...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp CCATCTCATCTGCTAAAATTCCACCAAGCAACTGCGGCCCAGAATTTGGGTACTTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 3 (lower is better)
Translates to: PSHLLKFHQATAAQNLGTFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...AGTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAATTTTAGCAGATGAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR TCA 72 bp GTCTGGCGGCAGATTGCACACTTAATGGAGCTTCTGTaGGATCCCACGCTGTATTGTTCAATAATTATAGAA +
Preference number: 3 (lower is better)
Translates to: VWRQIAHLMELL*DPTLYCSIIIE
Trigger: TTCTATAATTATTGAACAATACAGCGTGGGATCTCACAGAAGCTCCATTAAGTGTGCAATCTGCCGCCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TTGTGTAGCATGTGGTGGGTGGGAAGGGTACTGTATTaGTGTCACTATATCTATGTAGTGGCTGTATCTATT +
Preference number: 3 (lower is better)
Translates to: LCSMWWVGRVLY*CHYIYVVAVSI
Trigger: AATAGATACAGCCACTACATAGATATAGTGACAGCAATACAGTACCCTTCCCACCCACCACATGCTACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp GCCTGTATATGGATTATAGTAGAGTTTCAGACCCTCAGATGTAACAATCTCTCGGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 3 (lower is better)
Translates to: ACIWIIVEFQTLRCNNLSDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...CGAGAGATTGTTACATCTGAGGGTCTGAAACTCTACTATAATCCATATACAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR TCA 72 bp ATATTATATTGCCTTACCTATGCTTCTATGTGTTCCTaGCCTACTTTACCTTCACAGGGATGTCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: ILYCLTYASMCS*PTLPSQGCPPP
Trigger: AGGAGGAGGACATCCCTGTGAAGGTAAAGTAGGTCAGGAACACATAGAAGCATAGGTAAGGCAATATAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp ATTACCCACCTGCTTATTCACATCAGAAACCAGGGGTaGTCTATGAAATTTCCTTCACTAATGCTGCCAACA +
Preference number: 3 (lower is better)
Translates to: ITHLLIHIRNQG*SMKFPSLMLPT
Trigger: TGTTGGCAGCATTAGTGAAGGAAATTTCATAGATCACCCCTGGTTTCTGATGTGAATAAGCAGGTGGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 3 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR-3UTR CAA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTTGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 3 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTCATAATTCACACACTTaGCATGTTGCCACAGGTGAC +
Preference number: 3 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSHNSHT*HVATGD
Trigger: GTCACCTGTGGCAACATGCAAAGTGTGTGAATTATG...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTGCCTATATGTCTGTTTaGGTACCATTCTGTTTTGGT +
Preference number: 3 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSAYMSV*VPFCFG
Trigger: ACCAAAACAGAATGGTACCAAAACAGACATATAGGC...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTaGAGACCTCCACAGTATCTTGGCAATAAAGCTGTA +
Preference number: 3 (lower is better)
Translates to: WWYLDLVNHIFL*RPPQYLGNKAV
Trigger: TACAGCTTTATTGCCAAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
3UTR GCA 72 bp TGTAGATGTGTGGTATTATTTCTGAGGTCTCTGTTCTaGTCCATTCGCCTATATGTCTGTTTTGGTACCATT +
Preference number: 3 (lower is better)
Translates to: CRCVVLFLRSLF*SIRLYVCFGTI
Trigger: AATGGTACCAAAACAGACATATAGGCGAATGGAGCAGAACAGAGACCTCAGAAATAATACCACACATCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CCA 72 bp CTATACCTCAACTCTAGATATTACATACTGTCTGCTTaGACAGCTCATCCAAAATTCAGGTCTCACTGTTTC +
Preference number: 3 (lower is better)
Translates to: LYLNSRYYILSA*TAHPKFRSHCF
Trigger: GAAACAGTGAGACCTGAATTTTGGATGAGCTGTCCAAGCAGACAGTATGTAATATCTAGAGTTGAGGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTGGTTTGTGGTGGTATTaGGATTTGGTCAATCACATC +
Preference number: 3 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIGLWWY*DLVNHI
Trigger: GATGTGATTGACCAAATCCAAATACCACCACAAACC...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR-3UTR CAA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 3 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
3UTR-3UTR CAA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 3 (lower is better)
Translates to: TFITMYSDLVAFETHFSFKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR-3UTR CAA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATTGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 3 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR TCA 72 bp CACTTCGTTATTATCACTTGCAACGATTTGCTTATGTaGACATGGCATTCTCTTGTTCAAAAGGTCAAAGAC +
Preference number: 3 (lower is better)
Translates to: HFVIITCNDLLM*TWHSLVQKVKD
Trigger: GTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR TCA 72 bp GATGCTTCAGTTAATTCACGTGTTAATCAATACTCATaGAAGACAGCGAGAAGTGAGAGCACAATAAACAGT +
Preference number: 3 (lower is better)
Translates to: DASVNSRVNQYS*KTARSESTINS
Trigger: ACTGTTTATTGTGCTCTCACTTCTCGCTGTCTTTCATGAGTATTGATTAACACGTGAATTAACTGAAGCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR TCA 72 bp CTTCAACTTAAGTGCATCCACCGAACAGGACATTTGTaGTCCCAGTATTCATTTTATATCTATGGTCAATCA +
Preference number: 3 (lower is better)
Translates to: LQLKCIHRTGHL*SQYSFYIYGQS
Trigger: TGATTGACCATAGATATAAAATGAATACTGGGATCACAAATGTCCTGTTCGGTGGATGCACTTAAGTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp TCATTGCATTTGCGTGGATTCAATGTAAACTCAGCATaGTGCAAATTCAAGTTCTGCTCTTTAGAACTTCAT +
Preference number: 3 (lower is better)
Translates to: SLHLRGFNVNSA*CKFKFCSLELH
Trigger: ATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATGCAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp ATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATTCAACATCAAACCTAT +
Preference number: 3 (lower is better)
Translates to: IPSSMLQRDPLK*FLHQQIQHQTY
Trigger: ATAGGTTTGATGTTGAATTTGTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
3UTR GCA 72 bp TTCCAGAAGAATTCAAATCTATATCTTGTCCTCACTTaGCCTATCCAAATATTTACTACTATATCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: FQKNSNLYLVLT*PIQIFTTISCP
Trigger: GGGGCAAGATATAGTAGTAAATATTTGGATAGGGCAAGTGAGGACAAGATATAGATTTGAATTCTTCTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR GCA 72 bp CAACAGTGTAAAAACGTTCCTATTTCTTCACAGCCTTaGCAGCATCTATTGTTTGTTGACTTTTTAATAATC +
Preference number: 3 (lower is better)
Translates to: QQCKNVPISSQP*QHLLFVDFLII
Trigger: GATTATTAAAAAGTCAACAAACAATAGATGCTGGCAAGGCTGTGAAGAAATAGGAACGTTTTTACACTGTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR GCA 72 bp CCCTGCAAAGGACATGATCTCATTCCTTTTTATGGATaGATAGTATTACATGGTGCATATGTACTATATTTT +
Preference number: 3 (lower is better)
Translates to: PCKGHDLIPFYG*IVLHGAYVLYF
Trigger: AAAATATAGTACATATGCACCATGTAATACTATGCATCCATAAAAAGGAATGAGATCATGTCCTTTGCAGGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGCGGCTCCCGGAGTCTaGGCGGGGCTGTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLAAPGV*AGLSAP
Trigger: CGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCTCTACATCTTCACCTaGGCAGGGCTGCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFLYIFT*AGLLVI
Trigger: GATGACGAGCAGCCCTGCCCAGGTGAAGATGTAGAG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGCGGCTCCCGGAGTCTaGGCGGGGCTGTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLAAPGV*AGLSAP
Trigger: CGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAACCACAGCGCCTAGCTaGCGGGCGCGCGCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLTTAPS*RARAVA
Trigger: CGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCACCACAGCGCCTAGCTaGCGGGCGCGCGCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCTTAPS*RARAVA
Trigger: CGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGT...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPSPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTGA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFNVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTTCTACAGTCACATCTaGCAGGCCTGTCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPFYSHI*QACPLW
Trigger: CCAGAGAGGACAGGCCTGCCAGATGTGACTGTAGAA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCACAAAGGCCATCTGTaGCCCTTGAGATGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVHKGHL*PLRCCG
Trigger: GCCACAGCATCTCAAGGGCCACAGATGGCCTTTGTG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTCCCTCTCAGCCCTTaGGCTTCCCGGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLPLSP*ASRAPG
Trigger: TCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCCTGGCTGGTCGGAGGTaGCAGACTGTTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGLAGRR*QTVADS
Trigger: TGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAG...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTTCATTACAGAAACAGTaGCCACAGGTCAGTACCGCC +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPSLQKQ*PQVSTA
Trigger: GGCGGTACTGACCTGTGGTCACTGTTTCTGTAATGA...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGACCACAGCGCCTAGCTaGCGGGCGCGCGCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLTTAPS*RARAVA
Trigger: CGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGTCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWSTNSL*VTAGLS
Trigger: AGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGA...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTGAGAGGAAGTCTGGCTaGTCGGAGGTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSERKSG*SEVTDC
Trigger: ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTC...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCGCGCGCGCTGTAGCGTaGGGTCAAGGCGAACGCGCT +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCARAVA*GQGERA
Trigger: AGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGC...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTCTCTACATCTTCACCTaGGCAGGGCTGCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSLYIFT*AGLLVI
Trigger: GATGACGAGCAGCCCTGCCCAGGTGAAGATGTAGAG...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTAGGGAACAAGACATGTaGGCCATATGTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPREQDM*AICSAR
Trigger: CCTGGCAGAACATATGGCCCACATGTCTTGTTCCCT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCCACCGAACATGGGCTTaGGGTGGGCACGAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRHRTWA*GGHERF
Trigger: AAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTG...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR TCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCCACCGAACATGGGCTTaGGGTGGGCACGAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLHRTWA*GGHERF
Trigger: AAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTG...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTCCCTCCCGACCTCTaGCCCCTGACCTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLPPDL*PLTFHH
Trigger: GTGATGGAAGGTCAGGGGTCAGAGGTCGGGAGGGAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS-3UTR TCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCTCATGCATATTCCAATaGAGCTGCTGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFSCIFQ*SCCLFS
Trigger: GGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGA...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 4 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACGAACAGCCTGTGGGTaGCAGCAGGCCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRTACG*QQACLS
Trigger: GCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGACCACAGCGCCTAGCTaGCGGGCGCGCGCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMTTAPS*RARAVA
Trigger: CGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGT...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCCGTACCTGCCTGGATTaGCTGTCCCTAGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGRTCLD*LSLVAP
Trigger: AGGAGCAACTAGGGACAGGCAATCCAGGCAGGTACG...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCGTGCTGGTCCACAAATaGAGGTTTCAGAGCATTAGT +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFVLVHK*RFQSIS
Trigger: ACTAATGCTCTGAAACCTGCATTTGTGGACCAGCAC...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTCAAATGCCTCAGGGCTaGACCATAAGTCACCTACTT +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPQMPQG*TISHLL
Trigger: AAGTAGGTGACTTATGGTGCAGCCCTGAGGCATTTG...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCAACATGGGCTTGAGGTaGGCACGAGCGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGNMGLR*ARALFA
Trigger: GGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTT...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTTGCCCCAACAAGCCCTaGTGTGTGTGTTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSCPNKP*CVCCSL
Trigger: AAGGGAACAACACACACACCAGGGCTTGTTGGGGCA...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGCGGCTCCCGGAGTCTaGGCGGGGCTGTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPAAPGV*AGLSAP
Trigger: CGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGTTCACCACTGAAGGATaGCTCCACCAGAATACCCTT +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVFTTEG*LHQNTL
Trigger: AAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAA...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 4 (lower is better)
Translates to: AICSARRPTSPSKMPGSCDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACCGAACAGCCTGTGGGTaGCAGCAGGCCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHRTACG*QQACLS
Trigger: GCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCG...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTGTACAATTCTGCTaGCAAGGCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPSVQFC*QGILTF
Trigger: GAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCTGCACCTATTTATCTaGCCTCTTAGTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVLHLFI*PLSSLS
Trigger: GGAGAGGGAACTAAGAGGGCAGATAAATAGGTGCAG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTACTGTTGCATTTGAGTaGTGGTCCACAAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPTVAFE*WSTNAG
Trigger: ACCTGCATTTGTGGACCAGCACTCAAATGCAACAGT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTCTCATCTACCCTCACTaGAGGAGCACGTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSLIYPH*RSTFPS
Trigger: CGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAG...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGGCGCGCGCTGTAGCGTaGGGTCAAGGCGAACGCGCT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQARAVA*GQGERA
Trigger: AGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGC...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR CCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCAATCGCCATTCTGACTaGTGTGAGATGGTATCTCAT +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFNRHSD*CEMVSH
Trigger: ATGAGATACCATCTCACACCAGTCAGAATGGCGATT...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAAGCAGAGCTTCCCTGTaGTCTTTGTTGCCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLASRASL*SLLPAY
Trigger: GTACGCTGGCAACAAAGACCACAGGGAAGCTCTGCT...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCGAGGCCAAGGAGCGTaGCGACGGACTCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKRGQGA*RRTPGS
Trigger: GGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCTAACATTTCACCACTaGAGGATGACTCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVLTFHH*RMTPPE
Trigger: TTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTCGTGTAGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPRVGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACG...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTGGCTGGTCGGAGGTaGCAGACTGTTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLAGRR*QTVADS
Trigger: TGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATCTGGCTGGTCGGAGGTaGCAGACTGTTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYLAGRR*QTVADS
Trigger: TGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAG...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTCCTGTTCTGCCAAAATaGGGTTGTAAAAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPPVLPK*GCKKPS
Trigger: AGATGGCTTTTTACAACCTCATTTTGGCAGAACAGG...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATGTTTGCACCAGGCCTaGGCTCCTCTACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLCLHQA*APLQTQ
Trigger: CTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR GCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTTCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSSRHKK*RALSVA
Trigger: TGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGA...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCACCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCGTTCTGTAGCCATTaGAAGTTCATCAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPSFCSH*KFINSR
Trigger: TCTGCTGTTGATGAACTTGCAATGGCTACAGAACGA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTTTGCCTGTCCCTAGTTaGTCCTTCTCATTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSLPVPS*SFSFSS
Trigger: GCTGGAAAATGAGAAGGAGCAACTAGGGACAGGCAA...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTGTTGCCAGCGTACCTaGCTGGATTGCCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLCCQRT*LDCLSL
Trigger: TAGGGACAGGCAATCCAGGCAGGTACGCTGGCAACA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCGTGGGCCATATGTTCTaGCAGGAGGCCTACTTCACC +
Preference number: 4 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRVGHMF*QEAYFT
Trigger: GGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCAC...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGGTCCCAGAAAAACCATaGCCTTTGATCTGTTTCACG +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVVPEKP*PLICFT
Trigger: CGTGAAACAGATCAAAGGCCATGGTTTTTCTGGGAC...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSTNSL*VTAGLS
Trigger: AGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTGCCAATCTCTATCCTaGGTGTCTAGGAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHCQSLS*VSRKAA
Trigger: GGCAGCTTTCCTAGACACCCAGGATAGAGATTGGCA...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCACCGAACATGGGCTTaGGGTGGGCACGAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLHRTWA*GGHERF
Trigger: AAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTCCCTCTCAGCCCTTaGGCTTCCCGGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLPLSP*ASRAPG
Trigger: TCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCGACTATCACTTAGAATaGTATAATGAGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFDYHLE*YNEQKR
Trigger: CCTCTTCTGCTCATTATATCATTCTAAGTGATAGTC...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCGTGTAGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVRVGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTTCTTCACTCCTTaGTATACCAAGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPSFFTP*YTKTRR
Trigger: TCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGACCCTCCCTATGGCCTaGAGCTCATGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLTLPMA*SSWAGF
Trigger: GAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTGGCGTGAAGCAGTGTaGCAACGTCGAGGAGGGATA +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITWREAV*QRRGGI
Trigger: TATCCCTCCTCGACGTTGTCACACTGCTTCACGCCA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCCACACTCTCCCAAGGTaGCCAATGGCAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: IQLVNVLSLWLTLRIIFIHTLPR*PMADNS
Trigger: AGAGTTGTCTGCCATTGGTCACCTTGGGAGAGTGTG...GATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR GCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCTTCTCTACTATCGAGTaGATGCCTTCTATATCATCT +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFFSTIE*MPSISS
Trigger: AGATGATATAGAAGGCATGCACTCGATAGTAGAGAA...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTATATTGCCTTACCTATaGTTCTATGTGTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPILPYL*FYVFLT
Trigger: GGTCAGGAACACATAGAAGCATAGGTAAGGCAATAT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACACACAGGTATCCATGTaGCATGGTAGTTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHTQVSM*HGSLLH
Trigger: GTGCAGCAAACTACCATGGCACATGGATACCTGTGT...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTACTTGTTGACTTCCTaGTCATCCCGCAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSYLLTS*SSRNPS
Trigger: GGAGGGATTGCGGGATGAGCAGGAAGTCAACAAGTA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGAACATGGGCTTGAGGTaGGCACGAGCGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITNMGLR*ARALFA
Trigger: GGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGGATCGGGAAGAGGTaGGGAAGACTCGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGIGKR*GRLAQR
Trigger: CCGCTGCGCGAGTCTTCCCCACCTCTTCCCGATCCC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTCATCTACCCTCACTaGAGGAGCACGTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLIYPH*RSTFPS
Trigger: CGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: AICSARRPTSPSKMPGSCNVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCNVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCATCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKASTNSL*VTAGLS
Trigger: AGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGA...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHSTNSL*VTAGLS
Trigger: AGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGA...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCITQGR*YPWVPG
Trigger: GCCAGGCACCCAGGGATACCACCTACCTTGCGTGAT...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGCGCGCGCTGTAGCGTaGGGTCAAGGCGAACGCGCT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSARAVA*GQGERA
Trigger: AGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367505.6
CDS-3UTR CCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTCAGGCCTGTCCTCTCTaGAATGACTATGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCQACPL*NDYDLP
Trigger: TGGGAGATCATAGTCATTCCAGAGAGGACAGGCCTG...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCTCCCTCTCAGCCCTTaGGCTTCCCGGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLPLSP*ASRAPG
Trigger: TCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCGAGGCCAAGGAGCGTaGCGACGGACTCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSRGQGA*RRTPGS
Trigger: GGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACCTAACATTTCACCACTaGAGGATGACTCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHLTFHH*RMTPPE
Trigger: TTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAG...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCGAACAGCCTGTGGGTaGCAGCAGGCCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKRTACG*QQACLS
Trigger: GCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTGCCATCCAATATTCATaGAGCAACTTATATTCCTTC +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPAIQYS*SNLYSF
Trigger: GAAGGAATATAAGTTGCTTCATGAATATTGGATGGC...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTGCCATCCAATATTCATaGAGCAACTTATATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPAIQYS*SNLYSF
Trigger: GAAGGAATATAAGTTGCTTCATGAATATTGGATGGC...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCACCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCACCACTCAGATCCATTTaGGTCCTTGTCTTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAPLRSI*VLVLGF
Trigger: AAAGCCTAAGACAAGGACTCAAATGGATCTGAGTGG...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGACAGTTCCTTGTACTGTaGTGCATGCTGTCACCTAAG +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGQFLVL*CMLSPK
Trigger: CTTAGGTGACAGCATGCATCACAGTACAAGGAACTG...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCAGAATACAATAAGCTaGTGTTTCAAGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVQNTIS*CFKEEV
Trigger: CACTTCCTCCTTGAAACATCAGCTTATTGTATTCTG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLPLESV*TRPALL
Trigger: GAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCACCGCAGGCCCCAGTaGATGAGGAGAAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKHRRPQ*MRRSTA
Trigger: GGCTGTGCTTCTCCTCATGCACTGGGGCCTGCGGTG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGAACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLEPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CAAAGTGATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: QSDTARQCLVPLAHSPDHQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...ATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR GCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCTTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACCTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCCTGTGGCCCTTGAGATaGTGTGGCCAGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCLWPLR*CGQRKR
Trigger: TCTCTTCCTCTGGCCACAGCATCTCAAGGGCCACAG...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAGCGTCCTCCCTCCCTaGTCCCGGAGGCCAAAGACC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSVLPP*SRRPKT
Trigger: GGTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS-3UTR CCA 90 bp ATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: IQLVNVLSLWLTLRIIFINVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...GATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CCA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: AICSARRPTSPSKMPGSCGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTATCAATGCAGGATGCTaGACATCCACTTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCINAGC*TSTWMD
Trigger: GTCCATCCAAGTGGATGTCCAGCATCCTGCATTGAT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCGTCCCAGAAAAACCATaGCCTTTGATCTGTTTCACG +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGVPEKP*PLICFT
Trigger: CGTGAAACAGATCAAAGGCCATGGTTTTTCTGGGAC...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTTTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCCAATTGTGTAGCATGTaGTGGGTGGGAAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRQLCSM*WVGRVL
Trigger: CAGTACCCTTCCCACCCACCACATGCTACACAATTG...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTGGAGAAAAGTTTCACCACTGAAGGATaGCTCCACCAGAATACCCTT +
Preference number: 4 (lower is better)
Translates to: GSTPHADGDRNAFPLEKSFTTEG*LHQNTL
Trigger: AAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAA...ACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp TTGGTAGGGTCTCAACACAGGGATCAATGCAGGATGCTGGACATCCACTTGGATGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LVGSQHRDQCRMLDIHLDVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...ATCCAAGTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTGAGACCCTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSCGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGACCCTCCCTATGGCCTaGAGCTCATGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKTLPMA*SSWAGF
Trigger: GAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGAGCTAATAAGTCCTaGGGGTCAAAGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGANKS*GSKRVL
Trigger: AAGGACCCTCTTTGACCCTCAGGACTTATTAGCTCC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGAGCTTCTATGTGTTCCTaGCCTACTTTACCTTCACAG +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGASMCS*PTLPSQ
Trigger: CTGTGAAGGTAAAGTAGGTCAGGAACACATAGAAGC...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTCTCAGCAGCCCTTTTaGGTGAAGGATTTGACTGTT +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSSQQPF*VKDLTV
Trigger: AACAGTCAAATCCTTCACTCAAAAGGGCTGCTGAGA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCGAACAGGACATTTGTaGTCCCAGTATTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVRTGHL*SQYSFY
Trigger: ATAAAATGAATACTGGGATCACAAATGTCCTGTTCG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANPLESV*TRPALL
Trigger: GAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGG...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCPLESV*TRPALL
Trigger: GAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGG...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCGAACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCEPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTC...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATTCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: DTARQCLVPLAHSPDHLHSRHKK*RALSVA
Trigger: TGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGA...ATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR GCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGATCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EAYFTIQNAWQLSELARGSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGCCGGTTTCAGTTTTCTaGATATGGCTAGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWPVSVF*IWLASF
Trigger: AAAACTGGCTAGCCATATGCAGAAAACTGAAACCGG...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGAATTCCCATACTGTCCTaGACTTCCTTCCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGIPILS*TSFLLV
Trigger: AACAAGCAGGAAGGAAGTGCAGGACAGTATGGGAAT...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTTGCAAATTCAAGTTCTaGTCTTTAGAACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPCKFKF*SLELHG
Trigger: TCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCA...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCCCTACACATCATTaGATTTGCGTGGATTCAATG +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSIPTHH*ICVDSM
Trigger: CATTGAATCCACGCAAATGCAATGATGTGTAGGGAT...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTCTTCACCATCCAAAATaGCTGGCAGTTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCLHHPK*LAVVRT
Trigger: AGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAG...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLNVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATGCAGGATGCTGGACATCCACTTGGATGGACTGCGTTTCTTGCTGATGTGTTTTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: MQDAGHPLGWTAFLADVFCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...AAACACATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCATCCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CCA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVDAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTGGAGAAAAGTTCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSTPHADGDRNAFPLEKSSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...ACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCITQGR*YPWVPG
Trigger: GCCAGGCACCCAGGGATACCACCTACCTTGCGTGAT...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGGCAGGGTTCAATATaGGCTCCACCAAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGQGSI*APPREH
Trigger: ATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCGTCACGATTCAAAATTaGGCTGTCCAGTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGVTIQN*AVQFQS
Trigger: ACTTTGGAACTGGACAGCCCAATTTTGAATCGTGAC...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp AATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCCTCTTCCAACACTCCCAAGGTGACCAATaGCAGACAACTCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: NVLSLWLTLRIIFILFQHSQGDQ*QTTLNL
Trigger: CAGATTCAGAGTTGTCTGCCATTGGTCACCTTGGGA...GTGTTGGAAGAGGATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 72 bp TCCCTCGGGAAGAGTGAGAGCATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAATCAGAGCCAAAACCTC +
Preference number: 4 (lower is better)
Translates to: SLGKSESILLDI*SSMCQNQSQNL
Trigger: GAGGTTTTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCCGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 72 bp ACCACTTTTCCCTCGGGAAGAGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGTGTCAGAATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TTFPSGRVRASC*TSCRVCVRIRA
Trigger: GGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCCGAGGGAAAAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCCGACCTCTGACCCCTaGCCTTCCATCACCCAAGCG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSPTSDP*PSITQA
Trigger: CGCTTGGGTGATGGAAGGTCAGGGGTCAGAGGTCGG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS-3UTR TCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGACTCTTCTTATCTCTGTaGGCCACTTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGLFLSL*ATSSFR
Trigger: TCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAG...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTAAAAACCATGGCCTTTaGTCTGTTTCACGAGACCTT +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCKNHGL*SVSRDL
Trigger: AAGGTCTCGTGAAACAGATCAAAGGCCATGGTTTTT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCTGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGTTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACCGAACAGCCTGTGGGTaGCAGCAGGCCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSVDIILILLMMRGKVNNRTACG*QQACLS
Trigger: GCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCG...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCCTGGCTGGTCGGAGGTaGCAGACTGTTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICLAGRR*QTVADS
Trigger: TGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAG...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCTTAATGGAGCTTCTGTaGGATCCCACGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRLMELL*DPTLYC
Trigger: ACAATACAGCGTGGGATCTCACAGAAGCTCCATTAA...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATACATCTTGCCACGTTaGGAAAACGAGTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLYILPR*ENECFG
Trigger: GCCAAAGCACTCGTTTTCTCAACGTGGCAAGATGTA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTACCCTCCCTATGGCCTaGAGCTCATGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSTLPMA*SSWAGF
Trigger: GAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTATTCTCTCCTCAGGCTaGCTAATTCATCATTCATCC +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSILSSG*LIHHSS
Trigger: GGATGAATGATGAATTAGTCAGCCTGAGGAGAGAAT...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTCTCTGCGCAAAACCTaGCACAGCAGTTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLSLRKT*HSSSFL
Trigger: TAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TTCAGACCCTCAGATGTAACAATCTCTCGCCATAAGAAGTGCAGGGCACTTTCAGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: FRPSDVTISRHKKCRALSGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...TGAAAGTGCCCTGCACTTCTTATGGCGAGAGATTGTTACATCTGAGGGTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR GCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCAAAACCTCCATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: ASCLTSCRVCVRIRAKTSIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...GGAGGTTTTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR GCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSNHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGCTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAACAGAGGCCTCTGAATaGTTTGCTGATGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLTEASE*FADEFV
Trigger: CACGAACTCATCAGCAAAGCATTCAGAGGCCTCTGT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGGATCGGGAAGAGGTaGGGAAGACTCGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGIGKR*GRLAQR
Trigger: CCGCTGCGCGAGTCTTCCCCACCTCTTCCCGATCCC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACCTCATCTACCCTCACTaGAGGAGCACGTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANLIYPH*RSTFPS
Trigger: CGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAG...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATCAATGCAGGATGCTaGACATCCACTTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLINAGC*TSTWMD
Trigger: GTCCATCCAAGTGGATGTCCAGCATCCTGCATTGAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKITQGR*YPWVPG
Trigger: GCCAGGCACCCAGGGATACCACCTACCTTGCGTGAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATTTCTTTGTGAGATGTaGTCTGGCGGCAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLFLCEM*SGGRLH
Trigger: GTGCAATCTGCCGCCAGACCACATCTCACAAAGAAA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCGMSSS*FAFSEV
Trigger: TACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCC...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGTGCACCCTCCCTATaGCCTGAAGCTCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGAPSL*PEAHGQ
Trigger: CTGCCCATGAGCTTCAGGCCATAGGGAGGGTGCACC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATTCCAGGCAGCTAACTaGGAGCTAATAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLFQAAN*ELISPE
Trigger: CTCAGGACTTATTAGCTCCCAGTTAGCTGCCTGGAA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTGTCACGATTCAAAATTaGGCTGTCCAGTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCVTIQN*AVQFQS
Trigger: ACTTTGGAACTGGACAGCCCAATTTTGAATCGTGAC...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGAATCTACAGACAACAGTaGCGTCTACCTATTCACTGT +
Preference number: 4 (lower is better)
Translates to: EAYFTIQNAWQLSELARGIYRQQ*RLPIHC
Trigger: ACAGTGAATAGGTAGACGCCACTGTTGTCTGTAGAT...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCTCTCAAATGTTCAGGTaGCCCTTCAACATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLSQMFR*PFNIWS
Trigger: GGACCAGATGTTGAAGGGCCACCTGAACATTTGAGA...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCACCGAACATGGGCTTaGGGTGGGCACGAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSHRTWA*GGHERF
Trigger: AAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCATGCATATTCCAATaGAGCTGCTGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSCIFQ*SCCLFS
Trigger: GGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACTTCACCACTGAAGGATaGCTCCACCAGAATACCCTT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYFTTEG*LHQNTL
Trigger: AAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAA...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTAACATTTCACCACTaGAGGATGACTCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLTFHH*RMTPPE
Trigger: TTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCTAACATTTCACCACTaGAGGATGACTCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITLTFHH*RMTPPE
Trigger: TTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAG...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCCGTGTAGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: IQLVNVLSLWLTLRIIFIRVGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACG...GATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp GGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTGGAGAAAAGTATCATCAGAGGTGTCTaGTGGCAAGTATTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GSTPHADGDRNAFPLEKSIIRGV*WQVFRI
Trigger: GATTCTGAATACTTGCCATCAGACACCTCTGATGAT...ACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTAGTAGCTGGACAGTaGCCTTGTGAATCGGGATTG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLVAGQ*PCESGL
Trigger: CAATCCCGATTCACAAGGTCACTGTCCAGCTACTAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: AICSARRPTSPSKMPGSCTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYWNLER*SELLLL
Trigger: CAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCA...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITWNLER*SELLLL
Trigger: CAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCATTACAGAAACAGTaGCCACAGGTCAGTACCGCC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSLQKQ*PQVSTA
Trigger: GGCGGTACTGACCTGTGGTCACTGTTTCTGTAATGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGGAGCTAATAAGTCCTaGGGGTCAAAGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLGANKS*GSKRVL
Trigger: AAGGACCCTCTTTGACCCTCAGGACTTATTAGCTCC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTCCAGCCCTCCCAACTTaGTTCAATCTTTTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSPALPT*FNLLKL
Trigger: TAACTTTAAAAGATTGAATCAAGTTGGGAGGGCTGG...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGAGTTAATCAATACTCATaGAAGACAGCGAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGVNQYS*KTARSE
Trigger: CTCACTTCTCGCTGTCTTTCATGAGTATTGATTAAC...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTGAAGACCTTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLKTFL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAAGGTCTTCAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCSRHKK*RALSVA
Trigger: TGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGA...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CAAAGTGATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: QSDTARQCLVPLAHSPDHRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...ATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAGAACTGAAGACCTCTaGAATCACGGAACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLRTEDL*NHGTSL
Trigger: CAGAGAAGTTCCGTGATTGCAGAGGTCTTCAGTTCT...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACCGGGTGGTGGTAGGTaGTCGATCATCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPPGGGR*SIIHQS
Trigger: GGACTGGTGGATGATCGAGCACCTACCACCACCCGG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCTCCTTTGGGTATATATaGAGTAATGGGATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRSFGYI*SNGIAG
Trigger: CCCAGCAATCCCATTACTGCATATATACCCAAAGGA...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTCATCTACCCTCACTaGAGGAGCACGTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLIYPH*RSTFPS
Trigger: CGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCAAAACCTCCGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ASCLTSCRVCVRIRAKTSGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...GGAGGTTTTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GGGAAGAGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGATCAATGCAGGATGCTaGACATCCACTTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: GKSESILLDILSSMCQNQINAGC*TSTWMD
Trigger: GTCCATCCAAGTGGATGTCCAGCATCCTGCATTGAT...CTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGACATGGTATTAGAAGGTaGTACATCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGHGIRR*YITISM
Trigger: CATGCTGATAGTGATGTACCACCTTCTAATACCATG...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCGAGAGGAAGTCTGGCTaGTCGGAGGTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICERKSG*SEVTDC
Trigger: ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTC...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLGMSSS*FAFSEV
Trigger: TACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGAGTGCTTTGGCCCCTaGATCTCTAAGCTGTATTTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLECFGP*ISKLYF
Trigger: AAAATACAGCTTAGAGATCCAGGGGCCAAAGCACTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGTGCACCCTCCCTATaGCCTGAAGCTCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGAPSL*PEAHGQ
Trigger: CTGCCCATGAGCTTCAGGCCATAGGGAGGGTGCACC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR CAA 72 bp AGGCTTGTTACACAGGTATCCATGTGCCATGGTAGTTaGCTGCACCTATTTATCTGCCCTCTTAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RLVTQVSMCHGS*LHLFICPLSSL
Trigger: GAGGGAACTAAGAGGGCAGATAAATAGGTGCAGCAAACTACCATGGCACATGGATACCTGTGTAACAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp CTCCTTGCTTTCTACACTTCAGCCACTCAGATCCATTaGAGTCCTTGTCTTAGGCTTTTCCATGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LLAFYTSATQIH*SPCLRLFHALA
Trigger: AGCCAGTGCATGGAAAAGCCTAAGACAAGGACTCAAATGGATCTGAGTGGCTGAAGTGTAGAAAGCAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp AAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTaGTACTGTGATGCATGCTGTCACCTAAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KPDTAVLSYASS*YCDACCHLRVS
Trigger: GCTCACCCTTAGGTGACAGCATGCATCACAGTACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGTTCTCCGAGCCTCTTaGGTCTGTTTGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSVLRAS*VCLHQA
Trigger: GGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAAC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACTCATGCATATTCCAATaGAGCTGCTGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYSCIFQ*SCCLFS
Trigger: GGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGA...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTCTTCTTATCTCTGTaGGCCACTTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLFLSL*ATSSFR
Trigger: TCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGAAGCTCACCACTTTTaGACACCTCTTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYEAHHF*TPLLIS
Trigger: AGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATGTGCAGGAAGAAGCTaGAGAGTTAATTCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLCAGRS*RVNSPR
Trigger: TCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTCACCACTGAAGGATaGCTCCACCAGAATACCCTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFTTEG*LHQNTL
Trigger: AAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: IQLVNVLSLWLTLRIIFIVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...GATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACGTGTAGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRVGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHWNLER*SELLLL
Trigger: CAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCA...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CGCAACACTTCTCTGTACAATTCTGCTGCCAAGGCATACTCACCTTCTACCTTTTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: RNTSLYNSAAKAYSPSTFLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...AAAGGTAGAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAAGTGTTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATACCCTCCCTATGGCCTaGAGCTCATGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYTLPMA*SSWAGF
Trigger: GAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTCTACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSLPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTAG...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTGTGGAATGAATGGATaGATGCTTATTCTAACTGTG +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSCGMNG*MLILTV
Trigger: CACAGTTAGAATAAGCATTCATCCATTCATTCCACA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCCACGTTTCCGTCGGCTaGTCATTTTCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLHVSVG*SFSSFL
Trigger: AAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTG...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGAACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKEPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSNHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACTTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGACAGGATATAAAGCTTaGTGGGCTTCAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITTGYKA*WASATS
Trigger: AGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCACAGGATATAAAGCTTaGTGGGCTTCAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLTGYKA*WASATS
Trigger: AGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCATTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGGAGGTGACAGACTGTTaGAGACTCAATAACATTACG +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITEVTDC*RLNNIT
Trigger: CGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTC...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGAGGTGACAGACTGTTaGAGACTCAATAACATTACG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLEVTDC*RLNNIT
Trigger: CGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGRDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAAGCGCCTACCCAAGCTaGTTCTCCGAGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSAYPS*FSEPLE
Trigger: CTCAAGAGGCTCGGAGAACCAGCTTGGGTAGGCGCT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS-3UTR CCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATCAATGCAGGATGCTaGACATCCACTTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLINAGC*TSTWMD
Trigger: GTCCATCCAAGTGGATGTCCAGCATCCTGCATTGAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSDAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCGTCCCAGAAAAACCATaGCCTTTGATCTGTTTCACG +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCVPEKP*PLICFT
Trigger: CGTGAAACAGATCAAAGGCCATGGTTTTTCTGGGAC...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGATTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: EAYFTIQNAWQLSELARGFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGATATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: EAYFTIQNAWQLSELARGYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCCACGAACAGCCTGTaGGTGACAGCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSTNSL*VTAGLS
Trigger: AGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPITQGR*YPWVPG
Trigger: GCCAGGCACCCAGGGATACCACCTACCTTGCGTGAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGATCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAGAGGAAGTCTGGCTaGTCGGAGGTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSERKSG*SEVTDC
Trigger: ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGATTGGGCAAGGTTCTaGATTAACACCTCCCGATGT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLDWARF*INTSRC
Trigger: ACATCGGGAGGTGTTAATCCAGAACCTTGCCCAATC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCCACTTTTGTAGAATaGCTGCCCTTCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSTFVE*LPFTGM
Trigger: CATCCCTGTGAAGGGCAGCCATTCTACAAAAGTGGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGTGCACCCTCCCTATaGCCTGAAGCTCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGAPSL*PEAHGQ
Trigger: CTGCCCATGAGCTTCAGGCCATAGGGAGGGTGCACC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTCCAGGCAGCTAACTaGGAGCTAATAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFQAAN*ELISPE
Trigger: CTCAGGACTTATTAGCTCCCAGTTAGCTGCCTGGAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAGCCTCTCGGACAAATaGGATCTAGGGAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSLSDK*DLGNGS
Trigger: AGAACCATTCCCTAGATCCCATTTGTCCGAGAGGCT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCACTGACTGGTGTGAGATaGTATCTCATTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKALTGVR*YLIVVL
Trigger: CAGAACCACAATGAGATACCATCTCACACCAGTCAG...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp ACACTTTGCATGTTGCCACAGGTGACACTTCAGGCATaGAACACGAGGCTTACGATCTATCTGATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TLCMLPQVTLQA*NTRLTIYLIKF
Trigger: GAACTTGATCAGATAGATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCACCTGTGGCAACATGCAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp ATTGCTGGGTCCTATGGGATTTCTGTTTCTAGATCCTaGAGGAATCGCCATACTGTCTTCCACAATGGTTGC +
Preference number: 4 (lower is better)
Translates to: IAGSYGISVSRS*RNRHTVFHNGC
Trigger: GCAACCATTGTGGAAGACAGTATGGCGATTCCTCAAGGATCTAGAAACAGAAATCCCATAGGACCCAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp GTTTCATCTTCTAGCATCTTTTCTTCTCCACCTCACTaGAGTCACCTACTTCTACAGTCACATCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSSSSIFSSPPH*SHLLLQSHLAG
Trigger: GCCTGCCAGATGTGACTGTAGAAGTAGGTGACTCAAGTGAGGTGGAGAAGAAAAGATGCTAGAAGATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp TGTTTGTTTCACAAAGTGATACAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTCCGGATCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLFHKVIQLVNV*SLWLTLRIIFI
Trigger: GATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTGTGAAACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 72 bp ATTCACCACTTTTCCCTCGGGAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGTATGTGTCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: IHHFSLGKSESI*LDILSSMCQNQ
Trigger: CTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCCGAGGGAAAAGTGGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCATGCATATTCCAATaGAGCTGCTGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSCIFQ*SCCLFS
Trigger: GGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCATGTGCAGGAAGAAGCTaGAGAGTTAATTCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKACAGRS*RVNSPR
Trigger: TCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACA...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLILGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CGCAACACTTCTCTGTACAATTCTGCTGCCAAGGCATACTCACCTTCTACCTTTATCATCAGAGGTGTCTaGTGGCAAGTATTCAGAATC +
Preference number: 4 (lower is better)
Translates to: RNTSLYNSAAKAYSPSTFIIRGV*WQVFRI
Trigger: GATTCTGAATACTTGCCATCAGACACCTCTGATGAT...AAAGGTAGAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAAGTGTTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCCTAGTAGCTGGACAGTaGCCTTGTGAATCGGGATTG +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICLVAGQ*PCESGL
Trigger: CAATCCCGATTCACAAGGTCACTGTCCAGCTACTAG...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTAGTAGCTGGACAGTaGCCTTGTGAATCGGGATTG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLVAGQ*PCESGL
Trigger: CAATCCCGATTCACAAGGTCACTGTCCAGCTACTAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGCTTACGATCTATCTaGTCAAGTTCACCACATATA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGLRSI*SSSPHI
Trigger: TATATGTGGTGAACTTGATCAGATAGATCGTAAGCC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLWNLER*SELLLL
Trigger: CAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGTTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGACAGCAGGCCTGTCTaGGCCTCAGCAATGGATACA +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPDSRPV*ASAMDT
Trigger: TGTATCCATTGCTGAGGCTCAGACAGGCCTGCTGTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTGGCTGGTCGGAGGTaGCAGACTGTTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLAGRR*QTVADS
Trigger: TGAGTCTGCAACAGTCTGTCACCTCCGACCAGCCAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCATTACAGAAACAGTaGCCACAGGTCAGTACCGCC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSLQKQ*PQVSTA
Trigger: GGCGGTACTGACCTGTGGTCACTGTTTCTGTAATGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTAATGGAGCTTCTGTaGGATCCCACGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLMELL*DPTLYC
Trigger: ACAATACAGCGTGGGATCTCACAGAAGCTCCATTAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCCACCAAGAGAACATaGGTTGCTTCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSTKRT*VASMIV
Trigger: AACTATCATTGAAGCAACTCATGTTCTCTTGGTGGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACATTACATGGTTAAGCTaGGGCTTTCAGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHITWLS*GFQAVY
Trigger: ATACACTGCCTGAAAGCCTCAGCTTAACCATGTAAT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATATCGCTAACCATGTTTaGATAAGTGTTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYIANHV*ISVLCS
Trigger: GGAACACAGAACACTTATTCAAACATGGTTAGCGAT...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTGTTTCAAGGAGGAAGTaGCAGACAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSVSRRK*QTAGQK
Trigger: TTTCTGGCCTGCTGTCTGTCACTTCCTCCTTGAAAC...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYPLESV*TRPALL
Trigger: GAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSEPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATAATTCACACACTTTaGATGTTGCCACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLIIHTL*MLPQVT
Trigger: TGTCACCTGTGGCAACATGCAAAGTGTGTGAATTAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAGAACTGAAGACCTCTaGAATCACGGAACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLRTEDL*NHGTSL
Trigger: CAGAGAAGTTCCGTGATTGCAGAGGTCTTCAGTTCT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR GCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAGAGGTGACAGACTGTTaGAGACTCAATAACATTACG +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAEVTDC*RLNNIT
Trigger: CGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTC...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACCTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSVDIILILLMMRGKVNNLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTCTGTCTCACTTATTaGCCAGAGACCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLCLTY*PETPGG
Trigger: ACCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCGTTCTGTAGCCATTaGAAGTTCATCAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCSFCSH*KFINSR
Trigger: TCTGCTGTTGATGAACTTGCAATGGCTACAGAACGA...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAAGGTCAAAGACTCGTaGTTAAGGGAGGAACAACTG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLKVKDS*LREEQL
Trigger: CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCTCTGTACAATTCTGCTaGCAAGGCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLISVQFC*QGILTF
Trigger: GAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGA...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR GCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGGGTACCCTAATAACTaGTTAACTACTGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYGYPNN*LTTGSE
Trigger: TTCACTACCAGTAGTTAAGCAGTTATTAGGGTACCC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAACATGGGCTTGAGGTaGGCACGAGCGCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSNMGLR*ARALFA
Trigger: GGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTCATCTACCCTCACTaGAGGAGCACGTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLIYPH*RSTFPS
Trigger: CGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKNVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLISTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGTCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTTCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATCACGCAAGGTAGGTaGTATCCCTGGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYITQGR*YPWVPG
Trigger: GCCAGGCACCCAGGGATACCACCTACCTTGCGTGAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGCTCTCGCAGCTGTTTaGCCTCTTCCTCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYALAAV*PLPQVG
Trigger: GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGAGAGGAAGTCTGGCTaGTCGGAGGTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSERKSG*SEVTDC
Trigger: ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCTGTCGAGCACAGATTaGGCAAGGTTCTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMLSSTD*ARFWIN
Trigger: GTTAATCCAGAACCTTGCCCAATCTGTGCTCGACAG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGTTTCTTTGTGAGATGTaGTCTGGCGGCAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQFLCEM*SGGRLH
Trigger: GTGCAATCTGCCGCCAGACCACATCTCACAAAGAAA...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGGCAGGGTTCAATATaGGCTCCACCAAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGQGSI*APPREH
Trigger: ATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATGGAGTCAGGGGACCTaGGCTCCACTGTTTACTTGC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPWSQGT*APLFTC
Trigger: GCAAGTAAACAGTGGAGCCCAGGTCCCCTGACTCCA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGGAGTCAGGGGACCTaGGCTCCACTGTTTACTTGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSWSQGT*APLFTC
Trigger: GCAAGTAAACAGTGGAGCCCAGGTCCCCTGACTCCA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAAAGAATGTAAGATATaGAGTCAGGGGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLKECKI*SQGTWA
Trigger: AGCCCAGGTCCCCTGACTCCATATCTTACATTCTTT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACTCAGTTTTCTGCATATaGCTAGCCAGTTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYSVFCI*LASFSS
Trigger: GCTGGAAAAACTGGCTAGCCATATGCAGAAAACTGA...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTGTAGCATGTGGTGGGTaGGAAGGGTACTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSVACGG*EGYCIA
Trigger: AGCAATACAGTACCCTTCCCACCCACCACATGCTAC...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTCTTCTTATCTCTGTaGGCCACTTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLFLSL*ATSSFR
Trigger: TCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGAAGCTCACCACTTTTaGACACCTCTTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLEAHHF*TPLLIS
Trigger: AGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCGTGTAGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLRVGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAAAAACCATGGCCTTTaGTCTGTTTCACGAGACCTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLKNHGL*SVSRDL
Trigger: AAGGTCTCGTGAAACAGATCAAAGGCCATGGTTTTT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACGGCTTACGATCTATCTaGTCAAGTTCACCACATATA +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYGLRSI*SSSPHI
Trigger: TATATGTGGTGAACTTGATCAGATAGATCGTAAGCC...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAACCTCACATGCCTGTTaGTCTCATCCACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPTSHAC*SHPPTG
Trigger: ACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTCTTTCTTCACTCCTTaGTATACCAAGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHSFFTP*YTKTRR
Trigger: TCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGA...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTCTGTCTAGGCTGCTaGGCTTCAGAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFCLGC*ASEPSQ
Trigger: CTGACTGGGCTCTGAAGCTCAGCAGCCTAGACAGAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACTTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATCACGTTTAAATGCTaGAAGGTTCTCCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLITFKC*KVLLKC
Trigger: ACATTTCAGGAGAACCTTTCAGCATTTAAACGTGAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGCTGATGAGTTCGTGTaGCTTCTCTCAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKADEFV*LLSAVF
Trigger: GAAAACTGCTGAGAGAAGTCACACGAACTCATCAGC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCTACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITLPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTAG...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCTGTCAAGCTTGTTCTaGTGTTCATGCTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITLSSLF*CSCFLN
Trigger: ATTAAGAAAGCATGAACATCAGAACAAGCTTGACAG...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCATTGGCATTTTTGTCATaGAGTCTTTGTCCATGCCTA +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKALAFLS*SLCPCL
Trigger: TAGGCATGGACAAAGACTTCATGACAAAAATGCCAA...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACATCAGAAACCAGGGGTaGTCTATGAAATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHIRNQG*SMKFPS
Trigger: TGAAGGAAATTTCATAGATCACCCCTGGTTTCTGAT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGGGGAACAGGACTAGATaGTCCTTAGGTCATGATGCT +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKGNRTR*SLGHDA
Trigger: AGCATCATGACCTAAGGATCATCTAGTCCTGTTCCC...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGAACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPEPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCATAATTCACACACTTTaGATGTTGCCACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCIIHTL*MLPQVT
Trigger: TGTCACCTGTGGCAACATGCAAAGTGTGTGAATTAT...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACATAATTCACACACTTTaGATGTTGCCACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHIIHTL*MLPQVT
Trigger: TGTCACCTGTGGCAACATGCAAAGTGTGTGAATTAT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGGTGGTATCCCTGGGTaGCTGGCTATCAACAATTCC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPGGIPG*LAINNS
Trigger: GGAATTGTTGATAGCCAGGCACCCAGGGATACCACC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGAGGTGACAGACTGTTaGAGACTCAATAACATTACG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLEVTDC*RLNNIT
Trigger: CGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACTCACCTGGGCAGGGCTaGTCGTCATCATCACTTATG +
Preference number: 4 (lower is better)
Translates to: SSVDIILILLMMRGKVNNSPGQG*SSSSLM
Trigger: CATAAGTGATGATGACGAGCAGCCCTGCCCAGGTGA...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACCTACTATCGAGTGCATaGCTTCTATATCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYLLSSA*LLYHLH
Trigger: ATGCAGATGATATAGAAGGCATGCACTCGATAGTAG...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTTCTCTACTATCGAGTaGATGCCTTCTATATCATCT +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITFSTIE*MPSISS
Trigger: AGATGATATAGAAGGCATGCACTCGATAGTAGAGAA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAAACATCTGTGCTTCCTaGCCCAACTCAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVNICAS*PNSNSF
Trigger: GAAGGAGTTTGAGTTGGGGCAGGAAGCACAGATGTT...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGGGTCTTCAACTTAAGTaGATCCACCGAACAGGACAT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQGLQLK*IHRTGH
Trigger: ATGTCCTGTTCGGTGGATGCACTTAAGTTGAAGACC...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACGGATCCTAGTGTGTTaGACGCTCGAGACAAACACC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPRILVC*TLETNT
Trigger: GGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCGGATCCTAGTGTGTTaGACGCTCGAGACAAACACC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSRILVC*TLETNT
Trigger: GGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATCAATGCAGGATGCTaGACATCCACTTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKINAGC*TSTWMD
Trigger: GTCCATCCAAGTGGATGTCCAGCATCCTGCATTGAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTATCAATGCAGGATGCTaGACATCCACTTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSINAGC*TSTWMD
Trigger: GTCCATCCAAGTGGATGTCCAGCATCCTGCATTGAT...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLDAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGCTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCTTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAGGCGGATTAGGCTTTaGCTCCCTAGGATCACGCAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYRRIRL*LPRITH
Trigger: GTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGATTGGGCAAGGTTCTaGATTAACACCTCCCGATGT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKDWARF*INTSRC
Trigger: ACATCGGGAGGTGTTAATCCAGAACCTTGCCCAATC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTGTCGAGCACAGATTaGGCAAGGTTCTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLSSTD*ARFWIN
Trigger: GTTAATCCAGAACCTTGCCCAATCTGTGCTCGACAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTTCTTTGTGAGATGTaGTCTGGCGGCAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKFLCEM*SGGRLH
Trigger: GTGCAATCTGCCGCCAGACCACATCTCACAAAGAAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGMSSS*FAFSEV
Trigger: TACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGGCAGGGTTCAATATaGGCTCCACCAAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGQGSI*APPREH
Trigger: ATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTCCAGGCAGCTAACTaGGAGCTAATAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKFQAAN*ELISPE
Trigger: CTCAGGACTTATTAGCTCCCAGTTAGCTGCCTGGAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTGGAGTCAGGGGACCTaGGCTCCACTGTTTACTTGC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYWSQGT*APLFTC
Trigger: GCAAGTAAACAGTGGAGCCCAGGTCCCCTGACTCCA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTGTGTAGCATGTGGTaGGTGGGAAGGGTACTGTAT +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSLCSMW*VGRVLY
Trigger: ATACAGTACCCTTCCCACCCACCACATGCTACACAA...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGATGAGTCAAAGTTTATaGAGACAGAGCCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITMSQSL*RQSLNK
Trigger: TTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCAT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACATTCTACACATAGTATaGCTAGGCTTCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYILHIV*LGFSVS
Trigger: ACTCACAGAGAAGCCTAGCCATACTATGTGTAGAAT...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GGACTGCTTCTGAAACACTCTTGTTGTAGCATCCAATTGACAGCCTCTCTTTGGAGAACTTGGAGAATTTaGGCTGTTTTTCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: GLLLKHSCCSIQLTASLWRTWRI*AVFPVV
Trigger: CACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCT...CCAAAGAGAGGCTGTCAATTGGATGCTACAACAAGAGTGTTTCAGAAGCAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 72 bp CAGATTTTTCTCATCATAATTCACACACTTTGCATGTaGCCACAGGTGACACTTCAGGCATTGAACACGAGG +
Preference number: 4 (lower is better)
Translates to: QIFLIIIHTLCM*PQVTLQALNTR
Trigger: CCTCGTGTTCAATGCCTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTGAATTATGATGAGAAAAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp AGCATTAGTTCTCATTTGTGTAACAACTTCCATTTTTaGAGCCCCCTGAAGCCCAGTTATCCCAACTCTACC +
Preference number: 4 (lower is better)
Translates to: SISSHLCNNFHF*SPLKPSYPNST
Trigger: GGTAGAGTTGGGATAACTGGGCTTCAGGGGGCTCAAAAAATGGAAGTTGTTACACAAATGAGAACTAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp ATCCACTTGGATGGACTGCGTTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAGCTCGTCAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: IHLDGLRFLLMC*FHKVIQLVNVL
Trigger: CAAGACATTGACGAGCTGTATCACTTTGTGAAACAAACACATCAGCAAGAAACGCAGTCCATCCAAGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTTCACCACTGAAGGATaGCTCCACCAGAATACCCTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSFTTEG*LHQNTL
Trigger: AAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTAAAAACCATGGCCTTTaGTCTGTTTCACGAGACCTT +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCKNHGL*SVSRDL
Trigger: AAGGTCTCGTGAAACAGATCAAAGGCCATGGTTTTT...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATCTAGTAGCTGGACAGTaGCCTTGTGAATCGGGATTG +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHLVAGQ*PCESGL
Trigger: CAATCCCGATTCACAAGGTCACTGTCCAGCTACTAG...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTAGTAGCTGGACAGTaGCCTTGTGAATCGGGATTG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLVAGQ*PCESGL
Trigger: CAATCCCGATTCACAAGGTCACTGTCCAGCTACTAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLITSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCGGCTTACGATCTATCTaGTCAAGTTCACCACATATA +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIGLRSI*SSSPHI
Trigger: TATATGTGGTGAACTTGATCAGATAGATCGTAAGCC...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGACAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SSVDIILILLMMRGKVNNQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCTTTCTTCACTCCTTaGTATACCAAGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSFFTP*YTKTRR
Trigger: TCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTTCACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCSPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTGA...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCGTTGTAAGTAAGAACTaGAGACCTCTGCAATCACGG +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICVVSKN*RPLQSR
Trigger: CCGTGATTGCAGAGGTCTTCAGTTCTTACTTACAAC...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTTGTAAGTAAGAACTaGAGACCTCTGCAATCACGG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVVSKN*RPLQSR
Trigger: CCGTGATTGCAGAGGTCTTCAGTTCTTACTTACAAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAAAAGACACAGCAGTTaGGAGGAAGTCTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSKRHSS*EEVWLV
Trigger: GACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAGCCATCCAATATTCATaGAGCAACTTATATTCCTTC +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAAIQYS*SNLYSF
Trigger: GAAGGAATATAAGTTGCTTCATGAATATTGGATGGC...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKCGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCATTACAGAAACAGTaGCCACAGGTCAGTACCGCC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSLQKQ*PQVSTA
Trigger: GGCGGTACTGACCTGTGGTCACTGTTTCTGTAATGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTAATGGAGCTTCTGTaGGATCCCACGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLMELL*DPTLYC
Trigger: ACAATACAGCGTGGGATCTCACAGAAGCTCCATTAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCCACCAAGAGAACATaGGTTGCTTCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSTKRT*VASMIV
Trigger: AACTATCATTGAAGCAACTCATGTTCTCTTGGTGGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGAGCTAATAAGTCCTaGGGGTCAAAGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGANKS*GSKRVL
Trigger: AAGGACCCTCTTTGACCCTCAGGACTTATTAGCTCC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGGTGTGGTATTATTTCTaGGGTCTCTGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKVWYYF*GLCSAP
Trigger: TGGAGCAGAACAGAGACCTCAGAAATAATACCACAC...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACCTCTGTCAGATGGGTTaGTTGCAAAAATTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHLCQMG*LQKFSP
Trigger: GGGAGAAAATTTTTGCAATCAACCCATCTGACAGAG...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGGATCAATGCAGGATaGTGGACATCCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGINAG*WTSTWM
Trigger: CATCCAAGTGGATGTCCAGCATCCTGCATTGATCCC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATGATGACGACCTCACATaGCTGTTGATCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHDDDLT*LLISST
Trigger: GGTGGATGAGATCAACAGGCATGTGAGGTCGTCATC...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTACGCTGGGCCATTTCTaGAGCTTTTACTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSTLGHF*SFYCGT
Trigger: TGTCCCACAGTAAAAGCTGCAGAAATGGCCCAGCGT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGACAGGATATAAAGCTTaGTGGGCTTCAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMTGYKA*WASATS
Trigger: AGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCTCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGAGAACTGAAGACCTCTaGAATCACGGAACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKRTEDL*NHGTSL
Trigger: CAGAGAAGTTCCGTGATTGCAGAGGTCTTCAGTTCT...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGGAGGTGACAGACTGTTaGAGACTCAATAACATTACG +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMEVTDC*RLNNIT
Trigger: CGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTC...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTTCGTTCTGTAGCCATTaGAAGTTCATCAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCSFCSH*KFINSR
Trigger: TCTGCTGTTGATGAACTTGCAATGGCTACAGAACGA...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCCATTAGAACCTGTGTaGAGGGGCAGCAGCAAAATA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSPLEPV*RGSSKI
Trigger: TATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTTTTCAGCATTGCCTaGATTCTTTCTTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVFSIA*ILSSIV
Trigger: AACAATAGAAGAAAGAATGCAGGCAATGCTGAAAAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTGCATGTGTATAAATTaGATTATGCCAGTTTCACCG +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHCMCIN*IMPVSP
Trigger: CGGTGAAACTGGCATAATGCAATTTATACACATGCA...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTAAGAATACTTCATCTTaGTTAAGAGTCAACCCCATC +
Preference number: 4 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCKNTSS*LRVNPI
Trigger: GATGGGGTTGACTCTTAAGCAAGATGAAGTATTCTT...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACATTGTGGTTCTGATTTaGATTTCTCCGATGATCAGT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYIVVLI*ISPMIS
Trigger: ACTGATCATCGGAGAAATGCAAATCAGAACCACAAT...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACATTTCTTCACAGCCTTaGCAGCATCTATTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYISSQP*QHLLFV
Trigger: AACAAACAATAGATGCTGGCAAGGCTGTGAAGAAAT...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTACAACTGCTTTCTCCTTaGTTTCTACACTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVQLLSP*FLHFSH
Trigger: GTGGCTGAAGTGTAGAAAGCAAGGAGAAAGCAGTTG...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCCAGGCTTATTCAACTaGTTTCTCCTTGCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMPGLFN*FLLAFY
Trigger: GTAGAAAGCAAGGAGAAAGCAGTTGAATAAGCCTGG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACCCCAACTCTACCCTTTaGTATAATTTATTGAACCCT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYPNSTL*YNLLNP
Trigger: AGGGTTCAATAAATTATAGCAAAGGGTAGAGTTGGG...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTAATGTAAACTCAGCATaGTGCAAATTCAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCNVNSA*CKFKFC
Trigger: GCAGAACTTGAATTTGCAGCATGCTGAGTTTACATT...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGATTGTACTGTGATGCATaGTGTCACCTAAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGLYCDA*CHLRVS
Trigger: GCTCACCCTTAGGTGACAGCATGCATCACAGTACAA...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCGGATCCTAGTGTGTTaGACGCTCGAGACAAACACC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYRILVC*TLETNT
Trigger: GGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATGCTGGACATCCACTTaGATGGACTGCGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPCWTST*MDCVSC
Trigger: GCAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AGAGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RVRASCLTSCRVCVRIRADAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...GGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTCCCAGAAAAACCATaGCCTTTGATCTGTTTCACG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVPEKP*PLICFT
Trigger: CGTGAAACAGATCAAAGGCCATGGTTTTTCTGGGAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCATGGTATTAGAAGGTaGTACATCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLHGIRR*YITISM
Trigger: CATGCTGATAGTGATGTACCACCTTCTAATACCATG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGTGGTATTTGGATTTaGTCAATCACATCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGGIWI*SITSFF
Trigger: AAAGAAAGATGTGATTGACCAAATCCAAATACCACC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGGGTGGTATTTGGATTTaGTCAATCACATCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITGGIWI*SITSFF
Trigger: AAAGAAAGATGTGATTGACCAAATCCAAATACCACC...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: TFITMYSDLVAFETHFSFGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGTAGGTGGTATCCCTaGGTGCCTGGCTATCAACAA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGRWYP*VPGYQQ
Trigger: TTGTTGATAGCCAGGCACCCAGGGATACCACCTACC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTTTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: VCCTGYKACWASATSVLHNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGMSSS*FAFSEV
Trigger: TACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGAGTGCTTTGGCCCCTaGATCTCTAAGCTGTATTTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKECFGP*ISKLYF
Trigger: AAAATACAGCTTAGAGATCCAGGGGCCAAAGCACTC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAGCCTCTCGGACAAATaGGATCTAGGGAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSLSDK*DLGNGS
Trigger: AGAACCATTCCCTAGATCCCATTTGTCCGAGAGGCT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGAAGGAGTCACTAAAGTaGTTTATGATAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITKESLK*FMIMQH
Trigger: ATGCTGCATTATCATAAACCACTTTAGTGACTCCTT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCAGCTACAGTTTTCTTaGGAGAAGGGTACCCTAATA +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMQLQFS*EKGTLI
Trigger: TATTAGGGTACCCTTCTCCCAAGAAAACTGTAGCTG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTTTCTTTTTCTCTGTCTaGGAGCCAACCTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCFFFSV*EPTYSL
Trigger: GAGAGAATAGGTTGGCTCCCAGACAGAGAAAAAGAA...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp AGAGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGAGCCATCATGAGCAGAACTTaGAGAATTTGGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RVRASCLTSCRVCVRIRAIMSRT*RIWAVF
Trigger: AAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGAT...GGCTCTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
3UTR CAA 72 bp CACTGGAGAAAAGTGGAGCCAGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTGGTCAATCACATCTTT +
Preference number: 4 (lower is better)
Translates to: HWRKVEPVYFFG*WWYLDLVNHIF
Trigger: AAAGATGTGATTGACCAAATCCAAATACCACCACAAACCGAAGAAATACACTGGCTCCACTTTTCTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCTAACATTTCACCACTaGAGGATGACTCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLTFHH*RMTPPE
Trigger: TTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAAAAACCATGGCCTTTaGTCTGTTTCACGAGACCTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKKNHGL*SVSRDL
Trigger: AAGGTCTCGTGAAACAGATCAAAGGCCATGGTTTTT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACAGAGTTGCTCTTGTTaGCACTGGTTCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPQSCSC*HWFHCN
Trigger: GTTGCAATGGAACCAGTGTCAACAAGAGCAACTCTG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSWNLER*SELLLL
Trigger: CAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCAAGACTCGAAGAGATaGCGACCTCACATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYQDSKR*RPHMPV
Trigger: AACAGGCATGTGAGGTCGTCATCTCTTCGAGTCTTG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGACACTCAACCATCTaGGCTTCATCAAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGHSTI*ASSRQI
Trigger: GATCTGCCTTGATGAAGCTCAGATGGTTGAGTGTCC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTGCCTGCTAAGCCATTaGGAGCACAAACTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYCLLSH*EHKLAV
Trigger: GACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGCCATCCAATATTCATaGAGCAACTTATATTCCTTC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLAIQYS*SNLYSF
Trigger: GAAGGAATATAAGTTGCTTCATGAATATTGGATGGC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSCGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCCCGATGTTTTATCTTaGGACTTCTCCAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLPDVLS*DFSKLV
Trigger: AACTAATTTGGAGAAGTCTCAAGATAAAACATCGGG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCATTACAGAAACAGTaGCCACAGGTCAGTACCGCC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSLQKQ*PQVSTA
Trigger: GGCGGTACTGACCTGTGGTCACTGTTTCTGTAATGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATACATCTTGCCACGTTaGGAAAACGAGTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPYILPR*ENECFG
Trigger: GCCAAAGCACTCGTTTTCTCAACGTGGCAAGATGTA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGCTGATGAGTTCGTGTaGCTTCTCTCAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPADEFV*LLSAVF
Trigger: GAAAACTGCTGAGAGAAGTCACACGAACTCATCAGC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATAACAACTCTACCATaGATTCAGATATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLITTLP*IQISLA
Trigger: AGCCAGTGATATCTGAATTCATGGTAGAGTTGTTAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGAGCTAATAAGTCCTaGGGGTCAAAGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGANKS*GSKRVL
Trigger: AAGGACCCTCTTTGACCCTCAGGACTTATTAGCTCC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTTCCCTGCAAAGGACATaGTCTCATTCCTTTTTATGG +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSSLQRT*SHSFLW
Trigger: CCATAAAAAGGAATGAGATCATGTCCTTTGCAGGGA...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCAACACAGGGATCAATaGAGGATGCTGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYQHRDQ*RMLDIH
Trigger: GTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSRHKK*RALSVA
Trigger: TGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSRHKK*RALSVA
Trigger: TGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTTCTCGCCATAAGAAGTaGAGGGCACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSSRHKK*RALSVA
Trigger: TGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGA...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATTCCACCAAGCAACTaGGGCCCAGAATTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYIPPSN*GPEFGY
Trigger: GTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLINHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLNHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTTCCACATTTCTTCTaGAAAGATGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVPHFF*KDVSSS
Trigger: AGAGCTGCTGACATCTTTGCAGAAGAAATGTGGAAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCTGTACAATTCTGCTaGCAAGGCATACTCACCTTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSVQFC*QGILTF
Trigger: AAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTTCTGTACAATTCTGCTaGCAAGGCATACTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSSVQFC*QGILTF
Trigger: AAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGA...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGACAGGATATAAAGCTTaGTGGGCTTCAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKTGYKA*WASATS
Trigger: AGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKARDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCGTTCTGTAGCCATTaGAAGTTCATCAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSFCSH*KFINSR
Trigger: TCTGCTGTTGATGAACTTGCAATGGCTACAGAACGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCCATTAGAACCTGTGTaGAGGGGCAGCAGCAAAATA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSPLEPV*RGSSKI
Trigger: TATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTACAGAGGCCTCTGAATaGTTTGCTGATGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSTEASE*FADEFV
Trigger: CACGAACTCATCAGCAAAGCATTCAGAGGCCTCTGT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCTACTATCGAGTGCATaGCTTCTATATCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMLLSSA*LLYHLH
Trigger: ATGCAGATGATATAGAAGGCATGCACTCGATAGTAG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYNVLSL*LTLRII
Trigger: GATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTCCCAGAAAAACCATaGCCTTTGATCTGTTTCACG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVPEKP*PLICFT
Trigger: CGTGAAACAGATCAAAGGCCATGGTTTTTCTGGGAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACCATGGTATTAGAAGGTaGTACATCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANHGIRR*YITISM
Trigger: CATGCTGATAGTGATGTACCACCTTCTAATACCATG...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTGCAGCTTTTACTGTaGGACACTCAACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLQLLL*DTQPSE
Trigger: CTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATCCCACTCAAACGCTaGGCCATTTCTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIPLKR*AISAAF
Trigger: AAAAGCTGCAGAAATGGCCCAGCGTTTGAGTGGGAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACGGTGGTATTTGGATTTaGTCAATCACATCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYGGIWI*SITSFF
Trigger: AAAGAAAGATGTGATTGACCAAATCCAAATACCACC...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGTATCCCTGGGTGCCTaGCTATCAACAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPVSLGA*LSTIPS
Trigger: TGATGGAATTGTTGATAGCCAGGCACCCAGGGATAC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTGATTGGGCAAGGTTCTaGATTAACACCTCCCGATGT +
Preference number: 4 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIDWARF*INTSRC
Trigger: ACATCGGGAGGTGTTAATCCAGAACCTTGCCCAATC...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGATTGGGCAAGGTTCTaGATTAACACCTCCCGATGT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPDWARF*INTSRC
Trigger: ACATCGGGAGGTGTTAATCCAGAACCTTGCCCAATC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCTGTCGAGCACAGATTaGGCAAGGTTCTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSLSSTD*ARFWIN
Trigger: GTTAATCCAGAACCTTGCCCAATCTGTGCTCGACAG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTTTCTTTGTGAGATGTaGTCTGGCGGCAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSFLCEM*SGGRLH
Trigger: GTGCAATCTGCCGCCAGACCACATCTCACAAAGAAA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCCACTTTTGTAGAATaGCTGCCCTTCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSTFVE*LPFTGM
Trigger: CATCCCTGTGAAGGGCAGCCATTCTACAAAAGTGGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAGTGCTTTGGCCCCTaGATCTCTAAGCTGTATTTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSECFGP*ISKLYF
Trigger: AAAATACAGCTTAGAGATCCAGGGGCCAAAGCACTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAAGCCTCTCGGACAAATaGGATCTAGGGAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSLSDK*DLGNGS
Trigger: AGAACCATTCCCTAGATCCCATTTGTCCGAGAGGCT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAGCCTCTCGGACAAATaGGATCTAGGGAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSLSDK*DLGNGS
Trigger: AGAACCATTCCCTAGATCCCATTTGTCCGAGAGGCT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCACCTATATGTCTGTTTTaGTACCATTCTGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAPICLF*YHSVLV
Trigger: AACCAAAACAGAATGGTACCAAAACAGACATATAGG...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCATCCCTTTGTCAATTTTaGCTTTTGTTGCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKASLCQF*LLLQLL
Trigger: AAGCAATTGCAACAAAAGCCAAAATTGACAAAGGGA...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCATTCCTTGTAAATTCTaGATATTAGACCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCIPCKF*ILDLCQ
Trigger: CTGACAGAGGTCTAATATCCAGAATTTACAAGGAAT...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGAGTTGCATTTGAGTGCTaGTCCACAAATGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGVAFEC*STNAGF
Trigger: GAAACCTGCATTTGTGGACCAGCACTCAAATGCAAC...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCATGCATATTCCAATaGAGCTGCTGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSCIFQ*SCCLFS
Trigger: GGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCTCTTCTTATCTCTGTaGGCCACTTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLFLSL*ATSSFR
Trigger: TCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAAGCTCACCACTTTTaGACACCTCTTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSEAHHF*TPLLIS
Trigger: AGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTCACCACTGAAGGATaGCTCCACCAGAATACCCTT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFTTEG*LHQNTL
Trigger: AAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTTGTAGCATCCAATTaGCAGCCTCTCTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYVVASN*QPLFGR
Trigger: CCTACCAAAGAGAGGCTGTCAATTGGATGCTACAAC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TATCATCACACGTGTAGGAGGGCATTGAACTTTTTCTTTTGGTTCAAATTCGATTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: YHHTCRRALNFFFWFKFDLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...ATCGAATTTGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGTGTGATGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR TCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTATCATCAGAGGTGTCTaGTGGCAAGTATTCAGAATC +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSIIRGV*WQVFRI
Trigger: GATTCTGAATACTTGCCATCAGACACCTCTGATGAT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTTGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGGACAGTGACCTTGTaGATCGGGATTGATAAATGG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSWTVTL*IGIDKW
Trigger: CCATTTATCAATCCCGATTCACAAGGTCACTGTCCA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCGGCTTACGATCTATCTaGTCAAGTTCACCACATATA +
Preference number: 4 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICGLRSI*SSSPHI
Trigger: TATATGTGGTGAACTTGATCAGATAGATCGTAAGCC...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATGAACCCACCAGTGTTTaGCACAGTAAGGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHEPTSV*HSKVQY
Trigger: GTATTGAACCTTACTGTGTCAAACACTGGTGGGTTC...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATATCACGGAACTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHITELL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAGTTCCGTGAT...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGTTGTAAGTAAGAACTaGAGACCTCTGCAATCACGG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPVVSKN*RPLQSR
Trigger: CCGTGATTGCAGAGGTCTTCAGTTCTTACTTACAAC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR TCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTGTTGTAAGTAAGAACTaGAGACCTCTGCAATCACGG +
Preference number: 4 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIVVSKN*RPLQSR
Trigger: CCGTGATTGCAGAGGTCTTCAGTTCTTACTTACAAC...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATGTTGTAAGTAAGAACTaGAGACCTCTGCAATCACGG +
Preference number: 4 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHVVSKN*RPLQSR
Trigger: CCGTGATTGCAGAGGTCTTCAGTTCTTACTTACAAC...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTTGCAGTCTGGCCTTTaGCTGTGTTGGAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSLQSGL*LCWKIA
Trigger: AGCTATTTTCCAACACAGTCAAAGGCCAGACTGCAA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSCGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPCGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCCTCATGTGGTTCAATaGTATGAAGAACAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSPHVVQ*YEEQAD
Trigger: ATCCGCCTGTTCTTCATATCATTGAACCACATGAGG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATTAATGGAGCTTCTGTaGGATCCCACGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLMELL*DPTLYC
Trigger: ACAATACAGCGTGGGATCTCACAGAAGCTCCATTAA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGCTGATGAGTTCGTGTaGCTTCTCTCAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYADEFV*LLSAVF
Trigger: GAAAACTGCTGAGAGAAGTCACACGAACTCATCAGC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAGGAACAACTGGAGTaGAATAACAACTCTACCATG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSEEQLE*NNNSTM
Trigger: CATGGTAGAGTTGTTATTTCACTCCAGTTGTTCCTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCACGTTTCCGTCGGCTaGTCATTTTCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSHVSVG*SFSSFL
Trigger: AAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGCCCATCCTCACTATTaGTATGTGGGATATCGACAT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPAHPHY*YVGYRH
Trigger: ATGTCGATATCCCACATAGCAATAGTGAGGATGGGC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGCTGAGGATTCTTCTTaGAGTAAGGCCGATAGAGAA +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPAEDSS*SKADRE
Trigger: TTCTCTATCGGCCTTACTGCAAGAAGAATCCTCAGC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCTGTACAATTCTGCTaGCAAGGCATACTCACCTTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSVQFC*QGILTF
Trigger: AAAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACTCATGGATGGTCTGCTaGACAGGATATAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSVDIILILLMMRGKVNNSWMVC*TGYKAC
Trigger: GCAAGCTTTATATCCTGTGCAGCAGACCATCCATGA...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAGAACTGAAGACCTCTaGAATCACGGAACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSRTEDL*NHGTSL
Trigger: CAGAGAAGTTCCGTGATTGCAGAGGTCTTCAGTTCT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCCATTAGAACCTGTGTaGAGGGGCAGCAGCAAAATA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYPLEPV*RGSSKI
Trigger: TATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGTTTTCAGCATTGCCTaGATTCTTTCTTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLVFSIA*ILSSIV
Trigger: AACAATAGAAGAAAGAATGCAGGCAATGCTGAAAAC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAAGGTCAAAGACTCGTaGTTAAGGGAGGAACAACTG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSKVKDS*LREEQL
Trigger: CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGTGCATGTGTATAAATTaGATTATGCCAGTTTCACCG +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQCMCIN*IMPVSP
Trigger: CGGTGAAACTGGCATAATGCAATTTATACACATGCA...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCGGACATCCACTTGGATaGACTGCGTTTCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TFITMYSDLVAFETHFSFGHPLG*TAFLAD
Trigger: ATCAGCAAGAAACGCAGTCCATCCAAGTGGATGTCC...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGGTGGTATTTGGATTTaGTCAATCACATCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLGGIWI*SITSFF
Trigger: AAAGAAAGATGTGATTGACCAAATCCAAATACCACC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCCACTGGAGAAAAGTaGAGCCAGTGTATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSTGEK*SQCISS
Trigger: CGAAGAAATACACTGGCTCCACTTTTCTCCAGTGGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCTGAGCCTCAGCAATaGATACAGGATAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSEPQQ*IQDRGD
Trigger: GTCACCTCTATCCTGTATCCATTGCTGAGGCTCAGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGATTGGGCAAGGTTCTaGATTAACACCTCCCGATGT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYDWARF*INTSRC
Trigger: ACATCGGGAGGTGTTAATCCAGAACCTTGCCCAATC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTGTCGAGCACAGATTaGGCAAGGTTCTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLSSTD*ARFWIN
Trigger: GTTAATCCAGAACCTTGCCCAATCTGTGCTCGACAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTTCTTTGTGAGATGTaGTCTGGCGGCAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFLCEM*SGGRLH
Trigger: GTGCAATCTGCCGCCAGACCACATCTCACAAAGAAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCCACTTTTGTAGAATaGCTGCCCTTCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSTFVE*LPFTGM
Trigger: CATCCCTGTGAAGGGCAGCCATTCTACAAAAGTGGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAAAGAATGTAAGATATaGAGTCAGGGGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSKECKI*SQGTWA
Trigger: AGCCCAGGTCCCCTGACTCCATATCTTACATTCTTT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTGGCTTTTCCATGCACTaGCTCTCTTCTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIGFSMH*LSSGFL
Trigger: AAGAAAACCAGAAGAGAGCCAGTGCATGGAAAAGCC...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGACCATCCAAAATGCCTaGCAGTTGTCAGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQTIQNA*QLSELA
Trigger: TGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGT...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp CCTCACTTGCCCTATCCAAATATTTACTACTATATCTaGCCCCTAGAAGGTTCTCTGCCAACTAGCAAAATA +
Preference number: 4 (lower is better)
Translates to: PHLPYPNIYYYI*PLEGSLPTSKI
Trigger: TATTTTGCTAGTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGCAAGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
3UTR CAA 72 bp CACATATCTAGAAAACAGTTGAGTCACGATTCAAAATaGGGCTGTCCAGTTCCAAAGTCTACCTTCTTAGTC +
Preference number: 4 (lower is better)
Translates to: HISRKQLSHDSK*GCPVPKSTFLV
Trigger: GACTAAGAAGGTAGACTTTGGAACTGGACAGCCCAATTTTGAATCGTGACTCAACTGTTTTCTAGATATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCATGCATATTCCAATaGAGCTGCTGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSCIFQ*SCCLFS
Trigger: GGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGACTATCACTTAGAATaGTATAATGAGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKDYHLE*YNEQKR
Trigger: CCTCTTCTGCTCATTATATCATTCTAAGTGATAGTC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGAAGCTCACCACTTTTaGACACCTCTTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPEAHHF*TPLLIS
Trigger: AGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGTGCAGGAAGAAGCTaGAGAGTTAATTCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSCAGRS*RVNSPR
Trigger: TCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTAACATTTCACCACTaGAGGATGACTCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLTFHH*RMTPPE
Trigger: TTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTGGGTACTCACGAATaGTGCAGCCTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLGTHE*CSLYMD
Trigger: ATCCATATACAGGCTGCATCATTCGTGAGTACCCAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCGTGTAGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSRVGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCTACACG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAAAAACCATGGCCTTTaGTCTGTTTCACGAGACCTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSKNHGL*SVSRDL
Trigger: AAGGTCTCGTGAAACAGATCAAAGGCCATGGTTTTT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATATCATCAGAGGTGTCTaGTGGCAAGTATTCAGAATC +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHIIRGV*WQVFRI
Trigger: GATTCTGAATACTTGCCATCAGACACCTCTGATGAT...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTGGAACTTGGAGAGATaGTCAGAGTTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYWNLER*SELLLL
Trigger: CAACAAGAGCAACTCTGATCATCTCTCCAAGTTCCA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCTTTCTTCACTCCTTaGTATACCAAGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSFFTP*YTKTRR
Trigger: TCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCATTTCGCACTCGCTaGACTAGCTCCTCATCAATA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSFRTR*TSSSSI
Trigger: TATTGATGAGGAGCTAGTTCAGCGAGTGCGAAATGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCTGTGGTTCAATGATATaGAGAACAGGCGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: TFITMYSDLVAFETHFSFCGSMI*RTGGLG
Trigger: GCCTAATCCGCCTGTTCTTCATATCATTGAACCACA...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCCCGATGTTTTATCTTaGGACTTCTCCAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKPDVLS*DFSKLV
Trigger: AACTAATTTGGAGAAGTCTCAAGATAAAACATCGGG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp CATTTGCGTGGATTCAATGTAAACTCAGCATGCTGCAAATTCAAGTTCTGCTCTCCCGATGTTTTATCTTaGGACTTCTCCAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: HLRGFNVNSACCKFKFCSPDVLS*DFSKLV
Trigger: AACTAATTTGGAGAAGTCTCAAGATAAAACATCGGG...AGAGCAGAACTTGAATTTGCAGCATGCTGAGTTTACATTGAATCCACGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCCACCAAGAGAACATaGGTTGCTTCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSTKRT*VASMIV
Trigger: AACTATCATTGAAGCAACTCATGTTCTCTTGGTGGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTAAAGTCCATGGAATaGATCAAGTGTAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLKSME*IKCSSF
Trigger: GAATGAACTACACTTGATTCATTCCATGGACTTTAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGAGGAACAACTGGAGTaGAATAACAACTCTACCATG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSEEQLE*NNNSTM
Trigger: CATGGTAGAGTTGTTATTTCACTCCAGTTGTTCCTC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTGAAGACCTTTCTCTaGCATAGAAAGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLKTFL*HRKLAS
Trigger: ACTGGCAAGCTTTCTATGTCAGAGAAAGGTCTTCAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTTGTAAGTAAGAACTaGAGACCTTTCTCTGACATA +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVVSKN*RPFSDI
Trigger: TATGTCAGAGAAAGGTCTTCAGTTCTTACTTACAAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCACGTTTCCGTCGGCTaGTCATTTTCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSHVSVG*SFSSFL
Trigger: AAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACCACGTTTCCGTCGGCTaGTCATTTTCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSVDIILILLMMRGKVNNHVSVG*SFSSFL
Trigger: AAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTG...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCTTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 4 (lower is better)
Translates to: TFITMYSDLVAFETHFSFFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTCTCTGTACAATTCTaGTGCCAAGGCATACTCACC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFSVQF*CQGILT
Trigger: GGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTACAGGATATAAAGCTTaGTGGGCTTCAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSTGYKA*WASATS
Trigger: AGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGAGGTGACAGACTGTTaGAGACTCAATAACATTACG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSEVTDC*RLNNIT
Trigger: CGTAATGTTATTGAGTCTGCAACAGTCTGTCACCTC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCGTTCTGTAGCCATTaGAAGTTCATCAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSFCSH*KFINSR
Trigger: TCTGCTGTTGATGAACTTGCAATGGCTACAGAACGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCGTTCTGTAGCCATTaGAAGTTCATCAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSFCSH*KFINSR
Trigger: TCTGCTGTTGATGAACTTGCAATGGCTACAGAACGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAAGGTCAAAGACTCGTaGTTAAGGGAGGAACAACTG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYKVKDS*LREEQL
Trigger: CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTATCTCCAAATTTCTTCTaGTCTATTCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVSPNFF*SILFLI
Trigger: GATGAGGAACAGAATAGAGCAGAAGAAATTTGGAGA...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp CTCAGCATGCTGCAAATTCAAGTTCTGCTCTTTAGAACTTCATGGAATTTTTCTGTTTACTTTGTGAGATaGCCAGTAGGTTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSMLQIQVLLFRTSWNFSVYFVR*PVGSKG
Trigger: ACCTTTGGAACCTACTGGGCATCTCACAAAGTAAAC...AGAAAAATTCCATGAAGTTCTAAAGAGCAGAACTTGAATTTGCAGCATGCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKDAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGACAGATGGAACTTaGAGAGATGATCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYVTDGT*RDDQSC
Trigger: GCAACTCTGATCATCTCTCCAAGTTCCATCTGTCAC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGATATAAAGCTTGCTaGGCTTCAGCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGYKAC*ASATSV
Trigger: TACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAAAGAATGTAAGATATaGAGTCAGGGGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYKECKI*SQGTWA
Trigger: AGCCCAGGTCCCCTGACTCCATATCTTACATTCTTT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCATTGATGGGCATTTaGATTGGTTCCATATATTTG +
Preference number: 4 (lower is better)
Translates to: TGYKACWASATSVLHLLMSLMGI*IGSIYL
Trigger: CAAATATATGGAACCAATCCAAATGCCCATCAATGA...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGAATTTGCCCGCACAATaGTACAATAGTCTTATGTTT +
Preference number: 4 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQNLPAQ*YNSLMF
Trigger: AAACATAAGACTATTGTACCATTGTGCGGGCAAATT...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp CCCAGTTATCCCAACTCTACCCTTTGCTATAATTTATaGAACCCTACCCTACATTCACTAAAGAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: PSYPNSTLCYNL*NPTLHSLKNFG
Trigger: ACCAAAGTTCTTTAGTGAATGTAGGGTAGGGTTCAATAAATTATAGCAAAGGGTAGAGTTGGGATAACTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTCTTCTTATCTCTGTaGGCCACTTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLFLSL*ATSSFR
Trigger: TCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGAAGCTCACCACTTTTaGACACCTCTTCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYEAHHF*TPLLIS
Trigger: AGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTGTGCAGGAAGAAGCTaGAGAGTTAATTCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYCAGRS*RVNSPR
Trigger: TCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGGTTTGTTTCACAAAGTaGTACAGCTCGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQVCFTK*YSSSMS
Trigger: AGACATTGACGAGCTGTATCACTTTGTGAAACAAAC...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGCTTACGATCTATCTaGTCAAGTTCACCACATATA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGLRSI*SSSPHI
Trigger: TATATGTGGTGAACTTGATCAGATAGATCGTAAGCC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATTCTTTCTTCACTCCTTaGTATACCAAGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHSFFTP*YTKTRR
Trigger: TCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGA...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCTTTCTTCACTCCTTaGTATACCAAGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSFFTP*YTKTRR
Trigger: TCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCCACCAAGAGAACATaGGTTGCTTCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSTKRT*VASMIV
Trigger: AACTATCATTGAAGCAACTCATGTTCTCTTGGTGGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGAGGAACAACTGGAGTaGAATAACAACTCTACCATG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYEEQLE*NNNSTM
Trigger: CATGGTAGAGTTGTTATTTCACTCCAGTTGTTCCTC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGGGATATGGAGGGCATTaGACTTTTTCTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQGYGGH*TFSFGS
Trigger: TGAACCAAAAGAAAAAGTTCAATGCCCTCCATATCC...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: TFITMYSDLVAFETHFSFRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAGAGTGAGAGCATCTTaGTTGACATCTTGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYRVRAS*LTSCRV
Trigger: TACTCGACAAGATGTCAAGCAAGATGCTCTCACTCT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATAATTCACACACTTTaGATGTTGCCACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIIHTL*MLPQVT
Trigger: TGTCACCTGTGGCAACATGCAAAGTGTGTGAATTAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSNHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCATCTCCTCAAATATTaGAGTCTGGCCTTTGACTGT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYHLLKY*SLAFDC
Trigger: ACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGATACATGTACAGAATATaGAGGCTTGTTACACAGGTA +
Preference number: 4 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGYMYRI*RLVTQV
Trigger: TACCTGTGTAACAAGCCTGCATATTCTGTACATGTA...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR GCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATAGGAGGGATAAAATTTaGCCGCACAATGGTACAATA +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHRRDKI*PHNGTI
Trigger: TATTGTACCATTGTGCGGGCAAATTTTATCCCTCCT...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCATGGTATTAGAAGGTaGTACATCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSHGIRR*YITISM
Trigger: CATGCTGATAGTGATGTACCACCTTCTAATACCATG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGAGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTTGAAGCTCATGGATaGTCTGCTGCACAGGATATA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFEAHG*SAAQDI
Trigger: TATATCCTGTGCAGCAGACCATCCATGAGCTTCAAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAATAACATTACGAGATaGAGGTCCCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSNNITR*RSLQVF
Trigger: AAAAACCTGGAGGGACCTCCATCTCGTAATGTTATT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCCCAGGTCTAATGAGTCAAAGTTTATGGAGACAGAGCCTGAACAAAAATATTGGTCAGGGTTTCCACTaGCAAAATGCTTTGTATAAA +
Preference number: 4 (lower is better)
Translates to: IPGLMSQSLWRQSLNKNIGQGFH*QNALYK
Trigger: TTTATACAAAGCATTTTGCCAGTGGAAACCCTGACC...AATATTTTTGTTCAGGCTCTGTCTCCATAAACTTTGACTCATTAGACCTGGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
3UTR CAA 72 bp AACGTTCCTATTTCTTCACAGCCTTGCCAGCATCTATaGTTTGTTGACTTTTTAATAATCGCCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: NVPISSQPCQHL*FVDFLIIAILT
Trigger: AGTCAGAATGGCGATTATTAAAAAGTCAACAAACAATAGATGCTGGCAAGGCTGTGAAGAAATAGGAACGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGACTATCACTTAGAATaGTATAATGAGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPDYHLE*YNEQKR
Trigger: CCTCTTCTGCTCATTATATCATTCTAAGTGATAGTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATACATCACTATCAGCATaGTTTAGAGATTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYTSLSA*FRDSAQ
Trigger: CTGTGCTGAATCTCTAAATCATGCTGATAGTGATGT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGCTTACGATCTATCTaGTCAAGTTCACCACATATA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGLRSI*SSSPHI
Trigger: TATATGTGGTGAACTTGATCAGATAGATCGTAAGCC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCACCTTTAATAATATaGATGCCTGCTAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSPLII*MPAKPL
Trigger: CAATGGCTTAGCAGGCATTCATATTATTAAAGGTGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTCAAAGAGATCCATTaGAGTGCTTCCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFKEIH*SASFIN
Trigger: GTTGATGAAGGAAGCACTTCAATGGATCTCTTTGAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGCCATCCAATATTCATaGAGCAACTTATATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSAIQYS*SNLYSF
Trigger: GAAGGAATATAAGTTGCTTCATGAATATTGGATGGC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACCCGATGTTTTATCTTaGGACTTCTCCAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPPDVLS*DFSKLV
Trigger: AACTAATTTGGAGAAGTCTCAAGATAAAACATCGGG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATCACGTTTAAATGCTaGAAGGTTCTCCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSITFKC*KVLLKC
Trigger: ACATTTCAGGAGAACCTTTCAGCATTTAAACGTGAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTAAAGTCCATGGAATaGATCAAGTGTAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLKSME*IKCSSF
Trigger: GAATGAACTACACTTGATTCATTCCATGGACTTTAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATAACAACTCTACCATaGATTCAGATATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPITTLP*IQISLA
Trigger: AGCCAGTGATATCTGAATTCATGGTAGAGTTGTTAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATAACAACTCTACCATaGATTCAGATATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSITTLP*IQISLA
Trigger: AGCCAGTGATATCTGAATTCATGGTAGAGTTGTTAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATACCTCCTTTTAACTaGAGAATAAGCACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIPPFN*RISTKS
Trigger: GCTTTTGGTGCTTATTCTTCAGTTAAAAGGAGGTAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTTTTCCTCAATTTACTaGGATTTCTCCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSFSSIY*DFSWTY
Trigger: ATAAGTCCAGGAGAAATCGCAGTAAATTGAGGAAAA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAATCACATCTTTCTTTaGAGACCTCCACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSNHIFL*RPPQYL
Trigger: AAGATACTGTGGAGGTCTGCAAAGAAAGATGTGATT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSRDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTTTTCAGCATTGCCTaGATTCTTTCTTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVFSIA*ILSSIV
Trigger: AACAATAGAAGAAAGAATGCAGGCAATGCTGAAAAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSDAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCATGGTATTAGAAGGTaGTACATCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYHGIRR*YITISM
Trigger: CATGCTGATAGTGATGTACCACCTTCTAATACCATG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACCTTTATTACCATGTACTCTGATTTAGTAGCTTTCGAAACACACTTCAGTTTCCATGGTATTAGAAGGTaGTACATCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: TFITMYSDLVAFETHFSFHGIRR*YITISM
Trigger: CATGCTGATAGTGATGTACCACCTTCTAATACCATG...GAAACTGAAGTGTGTTTCGAAAGCTACTAAATCAGAGTACATGGTAATAAAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CCA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGTGGTATTTGGATTTaGTCAATCACATCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGGIWI*SITSFF
Trigger: AAAGAAAGATGTGATTGACCAAATCCAAATACCACC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATTATTTCTTCGGTTTGTaGTGGTATTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHYFFGL*WYLDLV
Trigger: GACCAAATCCAAATACCACCACAAACCGAAGAAATA...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAATTCTATTGCTCTGTaGATCACATTTAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSNSIAL*ITFSHQ
Trigger: TTGGTGGCTAAATGTGATCCACAGAGCAATAGAATT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGATTTTTGATCTATGGTTaGCTATATCCACAGATACAC +
Preference number: 4 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGFLIYG*LYPQIH
Trigger: GTGTATCTGTGGATATAGCCAACCATAGATCAAAAA...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGACTATCACTTAGAATaGTATAATGAGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYDYHLE*YNEQKR
Trigger: CCTCTTCTGCTCATTATATCATTCTAAGTGATAGTC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAGACTCCTGTTCCGTTaGACATCGTATCTATATATA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYRLLFR*TSYLYI
Trigger: TATATATAGATACGATGTTCAACGGAACAGGAGTCT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATCACGTTTAAATGCTaGAAGGTTCTCCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYITFKC*KVLLKC
Trigger: ACATTTCAGGAGAACCTTTCAGCATTTAAACGTGAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTAAAGTCCATGGAATaGATCAAGTGTAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLKSME*IKCSSF
Trigger: GAATGAACTACACTTGATTCATTCCATGGACTTTAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATAACAACTCTACCATaGATTCAGATATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYITTLP*IQISLA
Trigger: AGCCAGTGATATCTGAATTCATGGTAGAGTTGTTAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATACCTCCTTTTAACTaGAGAATAAGCACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYIPPFN*RISTKS
Trigger: GCTTTTGGTGCTTATTCTTCAGTTAAAAGGAGGTAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR TCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTTGTAAGTAAGAACTaGAGACCTTTCTCTGACATA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYVVSKN*RPFSDI
Trigger: TATGTCAGAGAAAGGTCTTCAGTTCTTACTTACAAC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGTTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHRDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSRDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGTTTTCAGCATTGCCTaGATTCTTTCTTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSVFSIA*ILSSIV
Trigger: AACAATAGAAGAAAGAATGCAGGCAATGCTGAAAAC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGATGCAGCCTGTATATaGATTATAGTAGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYDAACI*IIVEFQ
Trigger: CTGAAACTCTACTATAATCCATATACAGGCTGCATC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTTTGTGGTGGTATTTaGATTTGGTCAATCACATCT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYVCGGI*IWSITS
Trigger: AGATGTGATTGACCAAATCCAAATACCACCACAAAC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTCTTCGGTTTGTGGTaGTATTTGGATTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFFGLW*YLDLVN
Trigger: ATTGACCAAATCCAAATACCACCACAAACCGAAGAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCTCTTACTAGCTTCTaGCATTTATTTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSLTSF*HLFSSS
Trigger: GGAAGAGCTAAATAAATGCCAGAAGCTAGTAAGAGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
3UTR CAA 72 bp TTACTATTCAAGGCTTTGAACTACAGTCCATTTACATaGTTCTCTACTATCGAGTGCATGCCTTCTATATCA +
Preference number: 4 (lower is better)
Translates to: LLFKALNYSPFT*FSTIECMPSIS
Trigger: TGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGTTCAAAGCCTTGAATAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTTGTTGCTTGTAGTTaGTGGTTATTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFVACS*WLFHFA
Trigger: TGCGAAATGAAATAACCAGCAACTACAAGCAACAAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR GCA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAGAGATCCATTGAAGTaGTTCCTTCATCAACAAATT +
Preference number: 4 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYRDPLK*FLHQQI
Trigger: AATTTGTTGATGAAGGAAGCACTTCAATGGATCTCT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS CCA 90 bp GACCCAGAAACCACAGCGCCTAGCTGCCGGGCGCGCGCTGTAGCGTaGGGTCAAGGCGAACGCGCTCGTCAGAGCACCCCGCCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: DPETTAPSCRARAVA*GQGERARQSTPPPF
Trigger: GAAAGGGGGCGGGGTGCTCTGACGAGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGTTTCTGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS TCA 90 bp CCAGCAGATCACGGGCACGCATTCGCCACCCACCGAACATGGGCTTaGGGTGGGCACGAGCGCTTTTTGCCGGAACGTGTAGGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: PADHGHAFATHRTWA*GGHERFLPERVGVP
Trigger: GGGGACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTGATCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS TCA 90 bp AACTTCAGTTATCTTCCGAAAGACCCACAAGCGGCTCCCGGAGTCTaGGCGGGGCTGTCAGCGCCGGATCGCTCCCAGCAGGCCGAGCAA +
Preference number: 5 (lower is better)
Translates to: NFSYLPKDPQAAPGV*AGLSAPDRSQQAEQ
Trigger: TTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGATAACTGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS GCA 90 bp CCAAGCGCCTACCCAAGCTGGTTCTCCGAGCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTCTACAGACCCAGCAGATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: PSAYPSWFSEPLESV*TRPALLYRPSRSRA
Trigger: TGCCCGTGATCTGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGGTAGGCGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS TCA 90 bp CTTCCATCACCCAAGCGCCTACCCAAGCTGGTTCTCCGAGCCTCTTaGGTCTGTTTGCACCAGGCCTGCGCTCCTCTACAGACCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LPSPKRLPKLVLRAS*VCLHQACAPLQTQQ
Trigger: CTGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGGTAGGCGCTTGGGTGATGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS TCA 90 bp CTAGTGTGTTGGACGCTCGAGACAAACACCGCAGGCCCCAGTGCATaGGGAGAAGCACAGCCTCCTTTCCCACGACCCCACTTTATCCCC +
Preference number: 5 (lower is better)
Translates to: LVCWTLETNTAGPSA*GEAQPPFPRPHFIP
Trigger: GGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTGCTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPGSPSL*SLFAPG
Trigger: GCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACC...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS-3UTR CAA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCTTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACGGGCACGAGCGCTTTTaGCCGGAACGTGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHGHERF*PERVGV
Trigger: GACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCC...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS TCA 90 bp TCTTGGCTGGTAACTGTGAACTCCAAGCTGGTTCTCCGAGCCTCTTaGGTCTGTTTGCACCAGGCCTGCGCTCCTCTACAGACCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SWLVTVNSKLVLRAS*VCLHQACAPLQTQQ
Trigger: CTGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGTTCACAGTTACCAGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS GCA 90 bp GATCCTAGTGTGTTGGACGCTCGAGACAAACACCGCAGGCCCCAGTaGATGAGGAGAAGCACAGCCTCCTTTCCCACGACCCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: DPSVLDARDKHRRPQ*MRRSTASFPTTPLY
Trigger: ATAAAGTGGGGTCGTGGGAAAGGAGGCTGTGCTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGCTCCCTCTCAGCCCTaGAGCTTCCCGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLAPSQP*SFPGSR
Trigger: CCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGGACCTCACATGCCTGTaGATCTCATCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVDLTCL*ISSTHW
Trigger: CCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTTTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTGCGTACCTGCCTGGATaGCCTGTCCCTAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCAYLPG*PVPSCS
Trigger: GGAGCAACTAGGGACAGGCAATCCAGGCAGGTACGC...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTTTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCGGTTTGTGGTGGTATTaGGATTTGGTCAATCACATC +
Preference number: 5 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFGLWWY*DLVNHI
Trigger: GATGTGATTGACCAAATCCAAATACCACCACAAACC...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCCACCGAACATGGGCTaGAGGTGGGCACGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLPPNMG*RWARAL
Trigger: AAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CAA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLGSPSL*SLFAPG
Trigger: GCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACC...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCCACACACTTTGCATGTaGCCACAGGTGACACTTCAG +
Preference number: 5 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGHTLCM*PQVTLQ
Trigger: CTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTG...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATGCTCTCGCAGCTGTTaGGCCTCTTCCTCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLCSRSC*ASSSSR
Trigger: CCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTGCTCTCGCAGCTGTTaGGCCTCTTCCTCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYCSRSC*ASSSSR
Trigger: CCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCA...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCCAAAAGACACAGCAGTaGAGAGGAAGTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGQKTQQ*RGSLAG
Trigger: ACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTG...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: VCCTGYKACWASATSVLHALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCCATTTTCAAGTTTTCTaGGCTGGTAACTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: CPETPGGGRCSIIHQSFFHFQVF*AGNCEL
Trigger: GAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATG...GAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp GAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTCAGAACTTGCAAGGGGAGCCCTGGTGTGTGTGTaGTTCCCTTCTTTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: EAYFTIQNAWQLSELARGALVCV*FPSLCP
Trigger: TGGACACAAAGAAGGGAACAACACACACACCAGGGC...TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS TCA 90 bp ATAGTAGGTTTTGTCTGTCCAATTCGGTGCACCCTCCCTATGGCCTaGAGCTCATGGGCAGGGTTCAATATGGGCTCCACCAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: IVGFVCPIRCTLPMA*SSWAGFNMGSTKRT
Trigger: TGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGTGCACCGAATTGGACAGACAAAACCTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000417762.5
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTGGGCACGAGCGCTTTTaGCCGGAACGTGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCGHERF*PERVGV
Trigger: GACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCC...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGCTCCCTCTCAGCCCTaGAGCTTCCCGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSAPSQP*SFPGSR
Trigger: CCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACTCTTAGTCGTTCTATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: RTGGLGFGSLGSRTLSRSIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...AGAACGACTAAGAGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCGACCTCACATGCCTGTaGATCTCATCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLDLTCL*ISSTHW
Trigger: CCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGTGTCATGGTGCTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWCHGAF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGCACCATGACA...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACTGCTCTCGCAGCTGTTaGGCCTCTTCCTCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYCSRSC*ASSSSR
Trigger: CCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCA...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCAAGAACTCTCCACGAACAGCCTGTGGGTGACAGCAGGCCTGTCTGAGCCTTGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: WQELSTNSLWVTAGLSEPWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...AGGCTCAGACAGGCCTGCTGTCACCCACAGGCTGTTCGTGGAGAGTTCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGGCAGCTACAGTTTTCTaGGGAGAAGGGTACCCTAAT +
Preference number: 5 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWAATVF*GEGYPN
Trigger: ATTAGGGTACCCTTCTCCCAAGAAAACTGTAGCTGC...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS TCA 90 bp ATGGCTGCCCTTCACAGGGATGTCCTCCTCCTGGTTTGCTTTCTCTaGGGTAAAGACATACGAGATTTCTTTGTGAGATGTGGTCTGGCG +
Preference number: 5 (lower is better)
Translates to: MAALHRDVLLLVCFL*GKDIRDFFVRCGLA
Trigger: CGCCAGACCACATCTCACAAAGAAATCTCGTATGTCTTTACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCCTGTGAAGGGCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGGCACGAGCGCTTTTaGCCGGAACGTGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGHERF*PERVGV
Trigger: GACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGCTCCCTCTCAGCCCTaGAGCTTCCCGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSAPSQP*SFPGSR
Trigger: CCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GGGAAGAGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: GKSESILLDILSSMCQNQQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...CTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp AATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCCTCTTCCAACACATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: NVLSLWLTLRIIFILFQHMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...GTGTTGGAAGAGGATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACGACCTCACATGCCTGTaGATCTCATCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: VCCTGYKACWASATSVLHDLTCL*ISSTHW
Trigger: CCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 5 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCTGCTCTCGCAGCTGTTaGGCCTCTTCCTCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLICSRSC*ASSSSR
Trigger: CCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCA...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACGTGTTGTTCCCTTCTTaGTGTCCATGTGTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHVLFPS*CPCVLS
Trigger: ACTGAGAACACATGGACACAAAGAAGGGAACAACAC...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGAAACAACTTCCATTTTTaGAGCCCCCTGAAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGNNFHF*SPLKPS
Trigger: ACTGGGCTTCAGGGGGCTCAAAAAATGGAAGTTGTT...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGTCTTATGCCAGTTCCTaGTACTGTGATGCATGCTGT +
Preference number: 5 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWSYASS*YCDACC
Trigger: ACAGCATGCATCACAGTACAAGGAACTGGCATAAGA...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CTTATTGCCCAGAGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTGTACGATATATGGTTaGCTATGTCTGAGAATCTTG +
Preference number: 5 (lower is better)
Translates to: LIAQRPRVVVGARSSTSPCTIYG*LCLRIL
Trigger: CAAGATTCTCAGACATAGCAAACCATATATCGTACA...AGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCTCTGGGCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAAGGCTTCTCTGTGAGTaGGAATGTAGAGATACAGAG +
Preference number: 5 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLARLLCE*ECRDTE
Trigger: CTCTGTATCTCTACATTCCAACTCACAGAGAAGCCT...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS TCA 90 bp CCAAGCCATCCACACTCTCCCAAGGTGACCAATGGCAGACAACTCTaGATCTGCAGTCCTGACCAAAGATGCAACGTCTGGAATAATAGA +
Preference number: 5 (lower is better)
Translates to: PSHPHSPKVTNGRQL*ICSPDQRCNVWNNR
Trigger: TCTATTATTCCAGACGTTGCATCTTTGGTCAGGACTGCAGATTCAGAGTTGTCTGCCATTGGTCACCTTGGGAGAGTGTGGATGGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS GCA 90 bp AGAACTTGGAGAATTTGGGCTGTTTTTCCAGTAGTGTTGATGAGCTaGACCAAGCCATCCACACTCTCCCAAGGTGACCAATGGCAGACA +
Preference number: 5 (lower is better)
Translates to: RTWRIWAVFPVVLMS*TKPSTLSQGDQWQT
Trigger: TGTCTGCCATTGGTCACCTTGGGAGAGTGTGGATGGCTTGGTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGGCACGAGCGCTTTTaGCCGGAACGTGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGHERF*PERVGV
Trigger: GACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCATCTCATCTGCTAAAATTCCACCAAGCAACTGCGGCCCAGAATTTGGGTACTATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: PSHLLKFHQATAAQNLGTIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...AGTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAATTTTAGCAGATGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGCTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACACACTTTGCATGTaGCCACAGGTGACACTTCAG +
Preference number: 5 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITHTLCM*PQVTLQ
Trigger: CTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTG...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TACCCTCTAATTTTTCTCCTTTCACTCCTGGACCTTTCACTGGCGCCCCCTGGACATAATTCACACACTTaGCATGTTGCCACAGGTGAC +
Preference number: 5 (lower is better)
Translates to: YPLIFLLSLLDLSLAPPGHNSHT*HVATGD
Trigger: GTCACCTGTGGCAACATGCAAAGTGTGTGAATTATG...TCCAGGGGGCGCCAGTGAAAGGTCCAGGAGTGAAAGGAGAAAAATTAGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTTCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: AICSARRPTSPSKMPGSCSELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGACCTCACATGCCTGTaGATCTCATCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLDLTCL*ISSTHW
Trigger: CCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAGGCCTCTGAATGCTTaGCTGATGAGTTCGTGTGAC +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLRPLNA*LMSSCD
Trigger: GTCACACGAACTCATCAGCAAAGCATTCAGAGGCCT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTTGGCCTCTTCCTCAAGTCGGCCATCACGCAAGGTAGGTGGTATCCCTGGGTGATATCTTGTCCTCACTaGCCCTATCCAAATATTTAC +
Preference number: 5 (lower is better)
Translates to: FGLFLKSAITQGRWYPWVISCPH*PYPNIY
Trigger: GTAAATATTTGGATAGGGCAAGTGAGGACAAGATAT...CACCCAGGGATACCACCTACCTTGCGTGATGGCCGACTTGAGGAAGAGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCCCTCTGTCAGATGGGTaGATTGCAAAAATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGPLSDG*IAKIFS
Trigger: GGAGAAAATTTTTGCAATCAACCCATCTGACAGAGG...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp AGACCCCGGGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTTCTCTTCTTTTTCAATaGGTTTTGAGAAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: RPRVVVGARSSTSPSSSSSLLFQ*VLRSSP
Trigger: TGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGA...AGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACCCGGGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ATTGACAGCCTCTCTTTGGTAGGGTCTCAACACAGGGATCAATGCAGGATGCTGGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: IDSLSLVGSQHRDQCRMLDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...CAGCATCCTGCATTGATCCCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp TACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGTCGGCTCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: YTCSCSALAAVWPLPQVGSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...GCCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCCATAATTCACACACTTaGCATGTTGCCACAGGTGAC +
Preference number: 5 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRHNSHT*HVATGD
Trigger: GTCACCTGTGGCAACATGCAAAGTGTGTGAATTATG...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCCATAATTCACACACTTaGCATGTTGCCACAGGTGAC +
Preference number: 5 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLHNSHT*HVATGD
Trigger: GTCACCTGTGGCAACATGCAAAGTGTGTGAATTATG...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 5 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CACCACATCCTGGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: HHILAAHLMLTVIEMPFHVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...GTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCCAGGATGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: VCCTGYKACWASATSVLHVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTGCTCTCGCAGCTGTTaGGCCTCTTCCTCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKCSRSC*ASSSSR
Trigger: CCGACTTGAGGAAGAGGCCAAACAGCTGCGAGAGCA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGTGGGCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCATGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: CGPYVLPGGLLHHPKCLAWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...TGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAGTCATGGTGCCTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKAVMVPF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGGCACCATGAC...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367503.7
CDS CCA 90 bp TGTTTGTTTCACAAAGTGATACAGCTCGTCAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATCTTCATCCTCTTCCAACACATCTGG +
Preference number: 5 (lower is better)
Translates to: CLFHKVIQLVNVLSL*LTLRIIFILFQHIW
Trigger: CCAGATGTGTTGGAAGAGGATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTGTGAAACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000433355.6
ENST00000438092.6
ENST00000519632.5
ENST00000629427.2
CDS CCA 90 bp CTCCGGATCATCTTCATCCTCTTCCAACACATCATGAGCAGAACTTaGAGAATTTGGGCTGTTTTTCCAGTAGTGTTGATGAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LRIIFILFQHIMSRT*RIWAVFPVVLMSCT
Trigger: GGTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGGATGAAGATGATCCGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp CCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCCCACTCAAACGCTCAGGAACTGATTGCTaGACTCTGAACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: PLCTGVPLIHHRLIPLKRSGTDC*TLNSSM
Trigger: CATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGA...GCGTTTGAGTGGGATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTGGAGAAAAGTTCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GSTPHADGDRNAFPLEKSSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...ACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp CGACCTCACATGCCTGTTGATCTCATCCACCCACTGGTGACAGATGGAACTTGGTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: RPHMPVDLIHPLVTDGTWFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...CCAAGTTCCATCTGTCACCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GTAACAATCTCTCGCCATAAGAAGTGCAGGGCACTTTCAGTAGCAGGACTGCTTGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: VTISRHKKCRALSVAGLLVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...AAGCAGTCCTGCTACTGAAAGTGCCCTGCACTTCTTATGGCGAGAGATTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTTCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: AICSARRPTSPSKMPGSCSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCAGAAAGCTTGCCAGTTaGTTGCTTGTAGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLRKLAS*LLVVAG
Trigger: ACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCT...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCAAAAGACACAGCAGTaGAGAGGAAGTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLQKTQQ*RGSLAG
Trigger: ACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTTGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAGGCCTCTGAATGCTTaGCTGATGAGTTCGTGTGAC +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLRPLNA*LMSSCD
Trigger: GTCACACGAACTCATCAGCAAAGCATTCAGAGGCCT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGGCTCCACTGTTTACTaGCTACATGTCCTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLGSTVY*LHVLRK
Trigger: CTTTCTTAGGACATGTAGCAAGTAAACAGTGGAGCC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAAAAGACACAGCAGTTGAGAGGAAGTCTGGCTGGTCGGAGGTGACAGACTGTATTCAAATCTATATCTaGTCCTCACTTGCCCTATCC +
Preference number: 5 (lower is better)
Translates to: TKDTAVERKSGWSEVTDCIQIYI*SSLALS
Trigger: GGATAGGGCAAGTGAGGACAAGATATAGATTTGAAT...ACAGTCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TCAGTTTTGAGTTTTCCTTTGTGTTCCTCCGAGGAGCGCAACACTTCTCTGTACCTCTCAGCAGCCCTTTaGAGTGAAGGATTTGACTGT +
Preference number: 5 (lower is better)
Translates to: SVLSFPLCSSEERNTSLYLSAAL*SEGFDC
Trigger: ACAGTCAAATCCTTCACTCAAAAGGGCTGCTGAGAG...GTACAGAGAAGTGTTGCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GCCATATGTTCTGCCAGGAGGCCTACTTCACCATCCAAAATGCCTGGCAGTTGTAAAATGAACAGGTGTTaGGATTTGATGGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: AICSARRPTSPSKMPGSCKMNRC*DLMGSM
Trigger: CATTGAGCCCATCAAATCCAAACACCTGTTCATTTT...ACAACTGCCAGGCATTTTGGATGGTGAAGTAGGCCTCCTGGCAGAACATATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GATACAGCTCGTCAATGTCTTGTCCCTCTGGCTCACTCTCCGGATCATCTTCATCAGAACTTGGAGAATTaGGGCTGTTTTTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: DTARQCLVPLAHSPDHLHQNLEN*GCFSSS
Trigger: ACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTG...ATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CCA 90 bp ATCTTCATCCTCTTCCAACACATCATGAGCAGAACTTGGAGAATTTaGGCTGTTTTTCCAGTAGTGTTGATGAGCTGCACCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: IFILFQHIMSRTWRI*AVFPVVLMSCTKPS
Trigger: GGATGGCTTGGTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGGATGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CCA 90 bp TGTTTGTTTCACAAAGTGATACAGCTCGTCAATGTCTTGTCCCTCTaGCTCACTCTCCGGATCATCTTCATCCTCTTCCAACACATCATG +
Preference number: 5 (lower is better)
Translates to: CLFHKVIQLVNVLSL*LTLRIIFILFQHIM
Trigger: CATGATGTGTTGGAAGAGGATGAAGATGATCCGGAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTGTATCACTTTGTGAAACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCCGGATCCTAGTGTGTaGGACGCTCGAGACAAACAC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSPDPSV*DARDKH
Trigger: GTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: TGYKACWASATSVLHLLMIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp CAGCTCCACATATCAACACTTTTCTGGATAGTTCTACTTGGATGTCTTAGGCACGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: QLHISTLFWIVLLGCLRHVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...GTGCCTAAGACATCCAAGTAGAACTATCCAGAAAAGTGTTGATATGTGGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCATCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKASELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp GGTGGTGGTAGGTGCTCGATCATCCACCAGTCCTTCTTCATCTTCTATCATCTCATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: GGGRCSIIHQSFFIFYHLIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...GAGATGATAGAAGATGAAGAAGGACTGGTGGATGATCGAGCACCTACCACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GGATGGTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: GWSAAQDIKLAGLQQLLYKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...ATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGACCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CATTTCTGCAGCTTTTACTGTGGGACACTCAACCATCTGAGCTTCATCAAGGCAAGAAAGCTTGCCAGTTaGTTGCTTGTAGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: HFCSFYCGTLNHLSFIKARKLAS*LLVVAG
Trigger: ACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCT...TGCCTTGATGAAGCTCAGATGGTTGAGTGTCCCACAGTAAAAGCTGCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCAAAAGACACAGCAGTaGAGAGGAAGTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCQKTQQ*RGSLAG
Trigger: ACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTG...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGCTCTGTCTCACTTATaGCCCAGAGACCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYALSHL*PRDPGW
Trigger: CCACCCGGGGTCTCTGGGCAATAAGTGAGACAGAGC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGAGAAAACGAGTGCTTaGGCCCCTGGATCTCTAAGC +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKEKTSA*APGSLS
Trigger: GCTTAGAGATCCAGGGGCCAAAGCACTCGTTTTCTC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GGCAGCACACCTCATGCTGACGGTGATAGAAATGCCTTTCCACTGGAGAAAAGTTCCAGCCCTCCCAACTaGATTCAATCTTTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: GSTPHADGDRNAFPLEKSSSPPN*IQSFKV
Trigger: AACTTTAAAAGATTGAATCAAGTTGGGAGGGCTGGA...ACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAGCATGAGGTGTGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCAAAATGCCTGGCAGTaGTCAGAACTTGCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: TGYKACWASATSVLHLLMQNAWQ*SELARG
Trigger: TCCCCTTGCAAGTTCTGACAACTGCCAGGCATTTTG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS CCA 90 bp GCTTGCTGTTCCCTTTTCTGTGATTTACTTGCCAATTACCTCATGTaGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ACCSLFCDLLANYLM*FNDMKNRRIRLWLP
Trigger: AGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCACATGAGGTAATTGGCAAGTAAATCACAGAAAAGGGAACAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYGSPSL*SLFAPG
Trigger: GCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACCGGATCCTAGTGTGTaGGACGCTCGAGACAAACAC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPPDPSV*DARDKH
Trigger: GTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GGGAAGAGTGAGAGCATCTTGCTTGACATCTTGTCGAGTATGTGTCAGAATCAGTCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GKSESILLDILSSMCQNQSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...CTGATTCTGACACATACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTGGTAGGGTCTCAACACAGGGATCAATGCAGGATGCTGGACATCCACTTGGATTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: LVGSQHRDQCRMLDIHLDFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...ATCCAAGTGGATGTCCAGCATCCTGCATTGATCCCTGTGTTGAGACCCTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp CCATCTCATCTGCTAAAATTCCACCAAGCAACTGCGGCCCAGAATTTGGGTACTATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: PSHLLKFHQATAAQNLGTILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...AGTACCCAAATTCTGGGCCGCAGTTGCTTGGTGGAATTTTAGCAGATGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCATAATTCACACACTTaGCATGTTGCCACAGGTGAC +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLHNSHT*HVATGD
Trigger: GTCACCTGTGGCAACATGCAAAGTGTGTGAATTATG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATTGACACTGGTTCCATaGCAACAAGGCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLTLVP*QQGSGG
Trigger: GCCCCCACTGCCTTGTTGCAATGGAACCAGTGTCAA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGACCTCACATGCCTGTaGATCTCATCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSDLTCL*ISSTHW
Trigger: CCAGTGGGTGGATGAGATCAACAGGCATGTGAGGTC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: VCCTGYKACWASATSVLHQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAGAAAGCTTGCCAGTTaGTTGCTTGTAGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLRKLAS*LLVVAG
Trigger: ACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCAAAAGACACAGCAGTaGAGAGGAAGTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKQKTQQ*RGSLAG
Trigger: ACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTTCAAAGAGATCCATaGAAGTGCTTCCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLQRDP*KCFLHQ
Trigger: TTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAGAAAACGAGTGCTTaGGCCCCTGGATCTCTAAGC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSEKTSA*APGSLS
Trigger: GCTTAGAGATCCAGGGGCCAAAGCACTCGTTTTCTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAGCTCTTCAGTTTCTTaGGTAAATAGGTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSSSVS*VNRSAR
Trigger: CCTGGCAGACCTATTTACCAAAGAAACTGAAGAGCT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTAGAACATGGCATTCTCTaGTTCAAAAGGTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLEHGIL*FKRSKT
Trigger: AGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTC...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGGCTCCACTGTTTACTaGCTACATGTCCTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLGSTVY*LHVLRK
Trigger: CTTTCTTAGGACATGTAGCAAGTAAACAGTGGAGCC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCTGTATTACACTTGCTCATGTAGTGCTCTCGCAGCTGTTTGGCCTCTTCCTCCATTTTCAAGTTTTCTaGGCTGGTAACTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: FCITLAHVVLSQLFGLFLHFQVF*AGNCEL
Trigger: GAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATG...GAGGAAGAGGCCAAACAGCTGCGAGAGCACTACATGAGCAAGTGTAATACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGTCTTCTCCACCTCACTaGAGTCACCTACTTCTACAG +
Preference number: 5 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQSSPPH*SHLLLQ
Trigger: CTGTAGAAGTAGGTGACTCAAGTGAGGTGGAGAAGA...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS TCA 90 bp TCTTATCTCTGTGAGCCACTTCTTCCTTTAGACTATCACTTAGAATaGTATAATGAGCAGAAGAGGTATCTGAACCTGGGCAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SYLCEPLLPLDYHLE*YNEQKRYLNLGRAA
Trigger: AGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000433355.6
ENST00000438092.6
ENST00000629427.2
CDS TCA 90 bp TTTTCTGTGATTTACTTGCCAATTACCTCATGTGGTTCAATGATATaGAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGCACT +
Preference number: 5 (lower is better)
Translates to: FSVIYLPITSCGSMI*RTGGLGFGSLGSRT
Trigger: AGTGCGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCACATGAGGTAATTGGCAAGTAAATCACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS TCA 90 bp GCTCAGTGCCCTGATTCTGCCTTTTCTATGGGTCTTAGATATCTGTaGCATCTGCTTGCTGTTCCCTTTTCTGTGATTTACTTGCCAATT +
Preference number: 5 (lower is better)
Translates to: AQCPDSAFSMGLRYL*HLLAVPFSVIYLPI
Trigger: AATTGGCAAGTAAATCACAGAAAAGGGAACAGCAAGCAGATGTCACAGATATCTAAGACCCATAGAAAAGGCAGAATCAGGGCACTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCCGGATCCTAGTGTGTaGGACGCTCGAGACAAACAC +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYPDPSV*DARDKH
Trigger: GTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACATTTTCAAGTTTTCTaGGCTGGTAACTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLHFQVF*AGNCEL
Trigger: AAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTATCTCTTCTTTTTCAATaGGTTTTGAGAAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLSLLFQ*VLRSSP
Trigger: TGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGA...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCAGGAACTGATTGCTaGACTCTGAACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSGTDC*TLNSSM
Trigger: CATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCAGCTCGTCAATGTCTaGTCCCTCTGGCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYQLVNV*SLWLTL
Trigger: GAGAGTGAGCCAGAGGGACAAGACATTGACGAGCTG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCTGTCATGGTGCTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICCHGAF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGCACCATGACA...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCAAAAGACACAGCAGTaGAGAGGAAGTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSQKTQQ*RGSLAG
Trigger: ACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCCTTCAAAGAGATCCATaGAAGTGCTTCCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCLQRDP*KCFLHQ
Trigger: TTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAG...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGAGAAAACGAGTGCTTaGGCCCCTGGATCTCTAAGC +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSEKTSA*APGSLS
Trigger: GCTTAGAGATCCAGGGGCCAAAGCACTCGTTTTCTC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGAGAAAACGAGTGCTTaGGCCCCTGGATCTCTAAGC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPEKTSA*APGSLS
Trigger: GCTTAGAGATCCAGGGGCCAAAGCACTCGTTTTCTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CCTCTCGGACAAATGGGATCTAGGGAATGGTTCTATGAGTTTTCCAGGCAGCTACTTAACACGACTGATTaGTGCAAATTCCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: PLGQMGSREWFYEFSRQLLNTTD*CKFHVV
Trigger: AACAACATGGAATTTGCACAAATCAGTCGTGTTAAG...TAGCTGCCTGGAAAACTCATAGAACCATTCCCTAGATCCCATTTGTCCGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGTTCAATGATATGAAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGATCACGATGCATGTGTATAAATaGCATTATGCCAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: WFNDMKNRRIRLWLPRITMHVYK*HYASFT
Trigger: GGTGAAACTGGCATAATGCAATTTATACACATGCAT...CGTGATCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp AACCTCTCTGCGCAAAACCTGACACAGCAGTTCTTTCTTATGCCAGTTCCTTGTGCCTATATGTCTGTTTaGGTACCATTCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: NLSAQNLTQQFFLMPVPCAYMSV*VPFCFG
Trigger: ACCAAAACAGAATGGTACCAAAACAGACATATAGGC...ACAAGGAACTGGCATAAGAAAGAACTGCTGTGTCAGGTTTTGCGCAGAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTGTTCAAAACTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLFKTF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGTTTTGAACAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TGYKACWASATSVLHLLMSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SSVDIILILLMMRGKVNNMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATGCTGGACATCCACTaGGATGGACTGCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSMLDIH*DGLRFL
Trigger: CAAGAAACGCAGTCCATCCAAGTGGATGTCCAGCAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCCTGTATATGGATTATAGTAGAGTTTCAGACCCTCAGATGTAACAATCTCTCGAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: ACIWIIVEFQTLRCNNLSKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...CGAGAGATTGTTACATCTGAGGGTCTGAAACTCTACTATAATCCATATACAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGTGACACTTCAGGCATaGAACACGAGGCTTACGATC +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSVTLQA*NTRLTI
Trigger: GATCGTAAGCCTCGTGTTCAATGCCTGAAGTGTCAC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCACACACTTTGCATGTaGCCACAGGTGACACTTCAG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSHTLCM*PQVTLQ
Trigger: CTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACCACACACTTTGCATGTaGCCACAGGTGACACTTCAG +
Preference number: 5 (lower is better)
Translates to: SSVDIILILLMMRGKVNNHTLCM*PQVTLQ
Trigger: CTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTG...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACACACACTTTGCATGTaGCCACAGGTGACACTTCAG +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPHTLCM*PQVTLQ
Trigger: CTGAAGTGTCACCTGTGGCAACATGCAAAGTGTGTG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACCGCCCATCCTCACTATaGCTATGTGGGATATCGACA +
Preference number: 5 (lower is better)
Translates to: SSVDIILILLMMRGKVNNRPSSL*LCGIST
Trigger: TGTCGATATCCCACATAGCAATAGTGAGGATGGGCG...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACGGTTTGTGGTGGTATTaGGATTTGGTCAATCACATC +
Preference number: 5 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANGLWWY*DLVNHI
Trigger: GATGTGATTGACCAAATCCAAATACCACCACAAACC...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTGTCATGGTGCTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSCHGAF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGCACCATGACA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275233.12
ENST00000367505.6
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACGTTTTGAGTTTTCCTTaGTGTTCCTCCGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSVDIILILLMMRGKVNNVLSFP*CSSEER
Trigger: GCGCTCCTCGGAGGAACACAAAGGAAAACTCAAAAC...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGAGAAAGCTTGCCAGTTaGTTGCTTGTAGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKRKLAS*LLVVAG
Trigger: ACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGCAAAAGACACAGCAGTaGAGAGGAAGTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQQKTQQ*RGSLAG
Trigger: ACCAGCCAGACTTCCTCTCAACTGCTGTGTCTTTTG...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTTCAAAGAGATCCATaGAAGTGCTTCCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLQRDP*KCFLHQ
Trigger: TTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCCCGATGTTTTATCTaGAGACTTCTCCAAATTAGT +
Preference number: 5 (lower is better)
Translates to: AAQDIKLAGLQQLLYYTCSRCFI*RLLQIS
Trigger: ACTAATTTGGAGAAGTCTCAAGATAAAACATCGGGA...GCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGATACATCTTGCCACGTaGAGAAAACGAGTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKIHLAT*RKRVLW
Trigger: CCAAAGCACTCGTTTTCTCAACGTGGCAAGATGTAT...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAAGGCCTCTGAATGCTTaGCTGATGAGTTCGTGTGAC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPRPLNA*LMSSCD
Trigger: GTCACACGAACTCATCAGCAAAGCATTCAGAGGCCT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGCTCCACTGTTTACTaGCTACATGTCCTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKGSTVY*LHVLRK
Trigger: CTTTCTTAGGACATGTAGCAAGTAAACAGTGGAGCC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GTCTGCTGCACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACAAAGAATACTTCATCTaGCTTAAGAGTCAACCCCAT +
Preference number: 5 (lower is better)
Translates to: VCCTGYKACWASATSVLHKEYFI*LKSQPH
Trigger: ATGGGGTTGACTCTTAAGCAAGATGAAGTATTCTTT...GTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGTGCAGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCATGATGCCTCCAGCTTaGTTCTTTTGTAGTGCTTAT +
Preference number: 5 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIMMPPA*FFCSAY
Trigger: ATAAGCACTACAAAAGAACAAAGCTGGAGGCATCAT...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAATGTGCCATGGTAGTTaGCTGCACCTATTTATCTGC +
Preference number: 5 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVMCHGS*LHLFIC
Trigger: GCAGATAAATAGGTGCAGCAAACTACCATGGCACAT...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAAACAGGTGTTTGGATTaGATGGGCTCAATGACTCAG +
Preference number: 5 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVNRCLD*MGSMTQ
Trigger: CTGAGTCATTGAGCCCATCAAATCCAAACACCTGTT...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGGGGAAGGGTACTGTATaGCTGTCACTATATCTATGT +
Preference number: 5 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQGKGTV*LSLYLC
Trigger: ACATAGATATAGTGACAGCAATACAGTACCCTTCCC...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTCTCTTCTTTTTCAATaGGTTTTGAGAAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLSLLFQ*VLRSSP
Trigger: TGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCAGGAACTGATTGCTaGACTCTGAACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSGTDC*TLNSSM
Trigger: CATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGATCCTCTAATCCTCTCTGTACTGGAGTGCCACTGATACACCATCGATTAATCTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: RSSNPLCTGVPLIHHRLIFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...GATTAATCGATGGTGTATCAGTGGCACTCCAGTACAGAGAGGATTAGAGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGATGGACTGCGTTTCTaGCTGATGTGTTTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSDGLRF*LMCLFH
Trigger: GTGAAACAAACACATCAGCAAGAAACGCAGTCCATC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATTGACAGCCTCTCTTaGGTAGGGTCTCAACACAGG +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYIDSLS*VGSQHR
Trigger: CCTGTGTTGAGACCCTACCAAAGAGAGGCTGTCAAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCCTGTATATGGATTATAGTAGAGTTTCAGACCCTCAGATGTAACAATCTCTCGACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: ACIWIIVEFQTLRCNNLSTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...CGAGAGATTGTTACATCTGAGGGTCTGAAACTCTACTATAATCCATATACAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGAAGACTCCTGTTCCGTaGAACATCGTATCTATATAT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLKTPVP*NIVSIY
Trigger: ATATATAGATACGATGTTCAACGGAACAGGAGTCTT...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTGTGGTGGTATTTGGATTTGGTCAATCACATCTTTCTTTGCAGACCTCCACAGATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: LWWYLDLVNHIFLCRPPQIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...CTGTGGAGGTCTGCAAAGAAAGATGTGATTGACCAAATCCAAATACCACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAGGTTTGTGGTGGTATTaGGATTTGGTCAATCACATC +
Preference number: 5 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVGLWWY*DLVNHI
Trigger: GATGTGATTGACCAAATCCAAATACCACCACAAACC...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGATGCCTGCTAAGCCATaGAGAGCACAAACTAGCTGT +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQMPAKP*RAQTSC
Trigger: ACAGCTAGTTTGTGCTCTCAATGGCTTAGCAGGCAT...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGAATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACCTTCAAAGAGATCCATaGAAGTGCTTCCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANLQRDP*KCFLHQ
Trigger: TTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAG...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTATACATCTTGCCACGTaGAGAAAACGAGTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSIHLAT*RKRVLW
Trigger: CCAAAGCACTCGTTTTCTCAACGTGGCAAGATGTAT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGTGTGCAAATTCCATGTaGTTGTCAGTAAGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLCANSM*LSVRAF
Trigger: AAAAGCTCTTACTGACAACAACATGGAATTTGCACA...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGGAGGAACAACTGCTTCGTTATTATCACTaGCAACGATTTGCTTATGTG +
Preference number: 5 (lower is better)
Translates to: WHSLVQKVKDSCLREEQLLRYYH*QRFAYV
Trigger: CACATAAGCAAATCGTTGCAAGTGATAATAACGAAG...CAGTTGTTCCTCCCTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGCAGACCTCTGTCTACTaGTGGTGGATAGAAATATTA +
Preference number: 5 (lower is better)
Translates to: TGYKACWASATSVLHLLMQTSVY*WWIEIL
Trigger: TAATATTTCTATCCACCACAAGTAGACAGAGGTCTG...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGAATACCATCACACTGTaGCTAGGGAAGAAATGGTCT +
Preference number: 5 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKNTITL*LGKKWS
Trigger: AGACCATTTCTTCCCTAGCAACAGTGTGATGGTATT...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCAGGAACTGATTGCTaGACTCTGAACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSGTDC*TLNSSM
Trigger: CATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTAATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAAGAGTGAGAGCATCTaGCTTGACATCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSKSESI*LDILSS
Trigger: ACTCGACAAGATGTCAAGCAAGATGCTCTCACTCTT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGTCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACCTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACATAATTCACACACTTaGCATGTTGCCACAGGTGAC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPHNSHT*HVATGD
Trigger: GTCACCTGTGGCAACATGCAAAGTGTGTGAATTATG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATTCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHSELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp GCCCTATCCAAATATTTACTACTATATCTTGCCCCTAGAAGGTTCTCTGCCAACTGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: ALSKYLLLYLAPRRFSANWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...GTTGGCAGAGAACCTTCTAGGGGCAAGATATAGTAGTAAATATTTGGATAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGGTTTGTGGTGGTATTaGGATTTGGTCAATCACATC +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSGLWWY*DLVNHI
Trigger: GATGTGATTGACCAAATCCAAATACCACCACAAACC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTAGAAAGCTTGCCAGTTaGTTGCTTGTAGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSRKLAS*LLVVAG
Trigger: ACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTTCAAAGAGATCCATaGAAGTGCTTCCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLQRDP*KCFLHQ
Trigger: TTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATACATCTTGCCACGTaGAGAAAACGAGTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIHLAT*RKRVLW
Trigger: CCAAAGCACTCGTTTTCTCAACGTGGCAAGATGTAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAAGCTCTTCAGTTTCTTaGGTAAATAGGTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSSSVS*VNRSAR
Trigger: CCTGGCAGACCTATTTACCAAAGAAACTGAAGAGCT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGGCTCCACTGTTTACTaGCTACATGTCCTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSGSTVY*LHVLRK
Trigger: CTTTCTTAGGACATGTAGCAAGTAAACAGTGGAGCC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGATGCATGTGTATAAATaGCATTATGCCAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: TGYKACWASATSVLHLLMMHVYK*HYASFT
Trigger: GGTGAAACTGGCATAATGCAATTTATACACATGCAT...CATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp CAGGATATAAAGCTTGCTGGGCTTCAGCAACTTCTGTATTACACTTGCTCATGTTTCCCTTTGTCAATTTaGGCTTTTGTTGCAATTGCT +
Preference number: 5 (lower is better)
Translates to: QDIKLAGLQQLLYYTCSCFPLSI*AFVAIA
Trigger: AGCAATTGCAACAAAAGCCAAAATTGACAAAGGGAA...ACATGAGCAAGTGTAATACAGAAGTTGCTGAAGCCCAGCAAGCTTTATATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp ACTTATATTCCTTCTTCCATGCTTCAAAGAGATCCATTGAAGTGCTTCCTTCATTATGCAGTAATGGGATaGCTGGGTCCTATGGGATTT +
Preference number: 5 (lower is better)
Translates to: TYIPSSMLQRDPLKCFLHYAVMG*LGPMGF
Trigger: AAATCCCATAGGACCCAGCAATCCCATTACTGCATA...ATGAAGGAAGCACTTCAATGGATCTCTTTGAAGCATGGAAGAAGGAATATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp CTGCTCCATTCGCCTATATGTCTGTTTTGGTACCATTCTGTTTTGGTTACTGTACTTTTTCAATTGGTTTaGAGAAGCTCACCACTTTTG +
Preference number: 5 (lower is better)
Translates to: LLHSPICLFWYHSVLVTVLFQLV*RSSPLL
Trigger: CAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAG...TACAGTAACCAAAACAGAATGGTACCAAAACAGACATATAGGCGAATGGAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTTTTTCAATTGGTTTaGAGAAGCTCACCACTTTTG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLFQLV*RSSPLL
Trigger: CAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCAGGAACTGATTGCTaGACTCTGAACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSGTDC*TLNSSM
Trigger: CATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGTCAAGAAGTCTAGTTTaGCTAGGCCAGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQSRSLV*LGQLPK
Trigger: TTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGA...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAGAGCATCTTGCTaGACATCTTGTCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYVRASC*TSCRVC
Trigger: ACATACTCGACAAGATGTCAAGCAAGATGCTCTCAC...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp CAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATCTGCAAGACTCCTGTTCCGTaGAACATCGTATCTATATAT +
Preference number: 5 (lower is better)
Translates to: QSIYIVLYYRVHAFYIICKTPVP*NIVSIY
Trigger: ATATATAGATACGATGTTCAACGGAACAGGAGTCTT...GCAGATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCAGAATCTGTGTCCTaGTTCCCTGATTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSESVS*FPDFLV
Trigger: AACTAGAAAATCAGGGAACAAGGACACAGATTCTGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGCTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCAGAGTTGCTCTTGTaGACACTGGTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSELLL*TLVPLQ
Trigger: TTGCAATGGAACCAGTGTCAACAAGAGCAACTCTGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AAACTAGCTGTCGATGTGCTTCTTCACATTCAGTTCCACATTTCTTCTGCAAAGTGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: KLAVDVLLHIQFHISSAKWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...CTTTGCAGAAGAAATGTGGAACTGAATGTGAAGAAGCACATCGACAGCTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000433355.6
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGGTTTGTGGTGGTATTaGGATTTGGTCAATCACATC +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPGLWWY*DLVNHI
Trigger: GATGTGATTGACCAAATCCAAATACCACCACAAACC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATTTATATTCCTTTGGGTATATATGCAGTAATGGGATTGCTGGGTCCTATGGGAGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: IYIPLGIYAVMGLLGPMGVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...TCCCATAGGACCCAGCAATCCCATTACTGCATATATACCCAAAGGAATATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433355.6
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAGAAAGCTTGCCAGTTaGTTGCTTGTAGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYRKLAS*LLVVAG
Trigger: ACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATTGCAGTCTGGCCTTaGACTGTGTTGGAAAATAGC +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYIAVWP*TVLENS
Trigger: GCTATTTTCCAACACAGTCAAAGGCCAGACTGCAAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGTGTGCAAATTCCATGTaGTTGTCAGTAAGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKCANSM*LSVRAF
Trigger: AAAAGCTCTTACTGACAACAACATGGAATTTGCACA...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTTAACACGACTGATTaGTGCAAATTCCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLNTTD*CKFHVV
Trigger: AACAACATGGAATTTGCACAAATCAGTCGTGTTAAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAGCTCTTCAGTTTCTTaGGTAAATAGGTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSSSVS*VNRSAR
Trigger: CCTGGCAGACCTATTTACCAAAGAAACTGAAGAGCT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGAACATGGCATTCTCTaGTTCAAAAGGTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSEHGIL*FKRSKT
Trigger: AGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp GCTTATGTGAACATGGCATTCTCTTGTTCAAAAGGTCAAAGACTCGTGCTTAAGCTTCGTTATTATCACTaGCAACGATTTGCTTATGTG +
Preference number: 5 (lower is better)
Translates to: AYVNMAFSCSKGQRLVLKLRYYH*QRFAYV
Trigger: CACATAAGCAAATCGTTGCAAGTGATAATAACGAAG...CTTAAGCACGAGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTCACATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCTGTTCAAAACTTTTTaGGAGTGGCAAGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSLFKTF*EWQELS
Trigger: GGAGAGTTCTTGCCACTCCAAAAAAGTTTTGAACAG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCTTTTTCAATTGGTTTaGAGAAGCTCACCACTTTTG +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLFQLV*RSSPLL
Trigger: CAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: SSVDIILILLMMRGKVNNILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATACGTGTAGGAGGGCATaGAACTTTTTCTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYTCRRA*NFFFWF
Trigger: GAACCAAAAGAAAAAGTTCAATGCCCTCCTACACGT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTAAGACTCCTGTTCCGTaGAACATCGTATCTATATAT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSKTPVP*NIVSIY
Trigger: ATATATAGATACGATGTTCAACGGAACAGGAGTCTT...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTCTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCAATCACATCTTTCTTaGCAGACCTCCACAGTATCT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYQSHLS*QTSTVS
Trigger: AGATACTGTGGAGGTCTGCAAAGAAAGATGTGATTG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGTGTATTTCTTCGGTTaGTGGTGGTATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPVYFFG*WWYLDL
Trigger: CAAATCCAAATACCACCACAAACCGAAGAAATACAC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAAGCTTGCCAGTTTGTaGCTTGTAGTTGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYKLASL*LVVAGY
Trigger: ATAACCAGCAACTACAAGCAACAAACTGGCAAGCTT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGGCCTTTGACTGTGTaGGAAAATAGCTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSWPLTV*ENSFDS
Trigger: TGAATCAAAGCTATTTTCCAACACAGTCAAAGGCCA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGCTTCAAAGAGATCCATaGAAGTGCTTCCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQLQRDP*KCFLHQ
Trigger: TTGATGAAGGAAGCACTTCAATGGATCTCTTTGAAG...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTTCCCGATGTTTTATCTaGAGACTTCTCCAAATTAGT +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSSRCFI*RLLQIS
Trigger: ACTAATTTGGAGAAGTCTCAAGATAAAACATCGGGA...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATATTGGTGAATCATGTGCTAAAGATACTGAAGGCCCTTCCAAAACTGAGATCTGCAAATTCCATGTTGTaGTCAGTAAGAGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: ILVNHVLKILKALPKLRSANSML*SVRAFE
Trigger: TTCAAAAGCTCTTACTGACAACAACATGGAATTTGC...AGATCTCAGTTTTGGAAGGGCCTTCAGTATCTTTAGCACATGATTCACCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCAGAACATGGCATTCTCTaGTTCAAAAGGTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPEHGIL*FKRSKT
Trigger: AGTCTTTGACCTTTTGAACAAGAGAATGCCATGTTC...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGTAGTGTTGACATCATTCTCATTTTACTGATGATGCGAGGAAAGGTGAATAACATTCAAATCTATATCTaGTCCTCACTTGCCCTATCC +
Preference number: 5 (lower is better)
Translates to: SSVDIILILLMMRGKVNNIQIYI*SSLALS
Trigger: GGATAGGGCAAGTGAGGACAAGATATAGATTTGAAT...GTTATTCACCTTTCCTCGCATCATCAGTAAAATGAGAATGATGTCAACACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTCATTTTCAAGTTTTCTaGGCTGGTAACTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSHFQVF*AGNCEL
Trigger: AAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATG...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTTTTTCAATTGGTTTaGAGAAGCTCACCACTTTTG +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLFQLV*RSSPLL
Trigger: CAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATCTTGCTTGACATCTaGTCGAGTATGTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYILLDI*SSMCQN
Trigger: ATTCTGACACATACTCGACAAGATGTCAAGCAAGAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp AGCTTTGATTCATACTCTGTGAACAATTCATCAGCTTTACAAAAGACACAGCAGAAGACTCCTGTTCCGTaGAACATCGTATCTATATAT +
Preference number: 5 (lower is better)
Translates to: SFDSYSVNNSSALQKTQQKTPVP*NIVSIY
Trigger: ATATATAGATACGATGTTCAACGGAACAGGAGTCTT...CTGCTGTGTCTTTTGTAAAGCTGATGAATTGTTCACAGAGTATGAATCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000433355.6
ENST00000519632.5
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATATCTTTCTTCACTCCTaGATATACCAAGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYIFLHS*IYQDSK
Trigger: CTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGAT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATGGTGGTATTTGGATTaGGTCAATCACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPWWYLD*VNHIFL
Trigger: AAGAAAGATGTGATTGACCAAATCCAAATACCACCA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCATCCCGATGTTTTATCTaGAGACTTCTCCAAATTAGT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPSRCFI*RLLQIS
Trigger: ACTAATTTGGAGAAGTCTCAAGATAAAACATCGGGA...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTCCCGATGTTTTATCTaGAGACTTCTCCAAATTAGT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSSRCFI*RLLQIS
Trigger: ACTAATTTGGAGAAGTCTCAAGATAAAACATCGGGA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTGCAAATTCCATGTTGTaGTCAGTAAGAGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSANSML*SVRAFE
Trigger: TTCAAAAGCTCTTACTGACAACAACATGGAATTTGC...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ACACTTCGTTATTATCACTTGCAACGATTTGCTTATGTGAACATGGCATTCTCTTGTGCAAATTCCATGTaGTTGTCAGTAAGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TLRYYHLQRFAYVNMAFSCANSM*LSVRAF
Trigger: AAAAGCTCTTACTGACAACAACATGGAATTTGCACA...AGAGAATGCCATGTTCACATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp ATCAAATGGCTAGGATGTAACAAGCTACTCCTTATTCAGCAATTTCAAAGTCCACTTAACACGACTGATTaGTGCAAATTCCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: IKWLGCNKLLLIQQFQSPLNTTD*CKFHVV
Trigger: AACAACATGGAATTTGCACAAATCAGTCGTGTTAAG...TGGACTTTGAAATTGCTGAATAAGGAGTAGCTTGTTACATCCTAGCCATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCATTTTCAAGTTTTCTaGGCTGGTAACTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYHFQVF*AGNCEL
Trigger: GAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367505.6
CDS-3UTR CAA 90 bp ACTACAGTCCATTTACATTGTTCTCTACTATCGAGTGCATGCCTTCTATATCATATATCTTGTCCTCACTaGCCCTATCCAAATATTTAC +
Preference number: 5 (lower is better)
Translates to: TTVHLHCSLLSSACLLYHISCPH*PYPNIY
Trigger: GTAAATATTTGGATAGGGCAAGTGAGGACAAGATAT...ATGATATAGAAGGCATGCACTCGATAGTAGAGAACAATGTAAATGGACTGTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS GCA 90 bp TTAAACTCAAAAACAGATGAATGCGCAACCTGGAGAGAAACAAGATaGCCCAAAATAGTGAACACTAAGCATGTAATAGATATGAAATTG +
Preference number: 5 (lower is better)
Translates to: LNSKTDECATWRETR*PKIVNTKHVIDMKL
Trigger: CAATTTCATATCTATTACATGCTTAGTGTTCACTATTTTGGGGCATCTTGTTTCTCTCCAGGTTGCGCATTCATCTGTTTTTGAGTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCATTTTCAAGTTTTCTaGGCTGGTAACTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYHFQVF*AGNCEL
Trigger: AAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTCTCTTCTTTTTCAATaGGTTTTGAGAAGCTCACCA +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYSLLFQ*VLRSSP
Trigger: TGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTTCTTGCTGATGTGTTaGTTTCACAAAGTGATACAG +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYFLLMC*FHKVIQ
Trigger: CTGTATCACTTTGTGAAACAAACACATCAGCAAGAA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATAAGACTCCTGTTCCGTaGAACATCGTATCTATATAT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYKTPVP*NIVSIY
Trigger: ATATATAGATACGATGTTCAACGGAACAGGAGTCTT...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTCTGTTTCATGTTCTaGGTTGAATTCAGAGATACA +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLCFMF*VEFRDT
Trigger: TGTATCTCTGAATTCAACCAAGAACATGAAACAGAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATTGTGCAAATTCCATGTaGTTGTCAGTAAGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYCANSM*LSVRAF
Trigger: AAAAGCTCTTACTGACAACAACATGGAATTTGCACA...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTTAACACGACTGATTaGTGCAAATTCCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLNTTD*CKFHVV
Trigger: AACAACATGGAATTTGCACAAATCAGTCGTGTTAAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS-3UTR CAA 90 bp TTCCTCACAGAAGAAGAAACACTTCGTTATTATCACTTGCAACGATTTGCTTATCTTCGTTATTATCACTaGCAACGATTTGCTTATGTG +
Preference number: 5 (lower is better)
Translates to: FLTEEETLRYYHLQRFAYLRYYH*QRFAYV
Trigger: CACATAAGCAAATCGTTGCAAGTGATAATAACGAAG...ATAAGCAAATCGTTGCAAGTGATAATAACGAAGTGTTTCTTCTTCTGTGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS CCA 72 bp ACCACAGCGCCTAGCTGCCGGGCGCGCGCTGTAGCGTaGGGTCAAGGCGAACGCGCTCGTCAGAGCACCCCG +
Preference number: 6 (lower is better)
Translates to: TTAPSCRARAVA*GQGERARQSTP
Trigger: CGGGGTGCTCTGACGAGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367503.7
ENST00000519632.5
CDS GCA 72 bp GGTCCCCCGGGAGACCCAGAAACCACAGCGCCTAGCTaGCGGGCGCGCGCTGTAGCGTGGGGTCAAGGCGAA +
Preference number: 6 (lower is better)
Translates to: GPPGDPETTAPS*RARAVAWGQGE
Trigger: TTCGCCTTGACCCCACGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGTTTCTGGGTCTCCCGGGGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS TCA 72 bp TATCTTCCGAAAGACCCACAAGCGGCTCCCGGAGTCTaGGCGGGGCTGTCAGCGCCGGATCGCTCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: YLPKDPQAAPGV*AGLSAPDRSQQ
Trigger: CTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS CAA 90 bp CCCAGCAGATCACGGGCACGCATTCGCCACCCACCGAACATGGGCTaGAGGTGGGCACGAGCGCTTTTTGCCGGAACGTGTAGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PSRSRARIRHPPNMG*RWARALFAGTCRGP
Trigger: GGGACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTGATCTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS CAA 90 bp CGCGAGGCCAAGGAGCGTGACGACGGACTCCCGGATCCTAGTGTGTaGGACGCTCGAGACAAACACCGCAGGCCCCAGTGCATGAGGAGA +
Preference number: 6 (lower is better)
Translates to: REAKERDDGLPDPSV*DARDKHRRPQCMRR
Trigger: TCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS TCA 72 bp CACGGGCACGCATTCGCCACCCACCGAACATGGGCTTaGGGTGGGCACGAGCGCTTTTTGCCGGAACGTGTA +
Preference number: 6 (lower is better)
Translates to: HGHAFATHRTWA*GGHERFLPERV
Trigger: TACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS CCA 72 bp GCACGCATTCGCCACCCACCGAACATGGGCTTGAGGTaGGCACGAGCGCTTTTTGCCGGAACGTGTAGGGGT +
Preference number: 6 (lower is better)
Translates to: ARIRHPPNMGLR*ARALFAGTCRG
Trigger: ACCCCTACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS CCA 72 bp AGGAGCGTGACGACGGACTCCCGGATCCTAGTGTGTTaGACGCTCGAGACAAACACCGCAGGCCCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: RSVTTDSRILVC*TLETNTAGPSA
Trigger: TGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS CAA 72 bp TCACGGGCACGCATTCGCCACCCACCGAACATGGGCTaGAGGTGGGCACGAGCGCTTTTTGCCGGAACGTGT +
Preference number: 6 (lower is better)
Translates to: SRARIRHPPNMG*RWARALFAGTC
Trigger: ACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS CAA 72 bp AAGGAGCGTGACGACGGACTCCCGGATCCTAGTGTGTaGGACGCTCGAGACAAACACCGCAGGCCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: KERDDGLPDPSV*DARDKHRRPQC
Trigger: GCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS GCA 72 bp GTGTTGGACGCTCGAGACAAACACCGCAGGCCCCAGTaGATGAGGAGAAGCACAGCCTCCTTTCCCACGACC +
Preference number: 6 (lower is better)
Translates to: VLDARDKHRRPQ*MRRSTASFPTT
Trigger: GGTCGTGGGAAAGGAGGCTGTGCTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000438092.6
ENST00000629427.2
CDS CAA 90 bp CCTTCCATCACCCAAGCGCCTACCCAAGCTGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGCCTGCGCTCCTCTACAGACCCAGCA +
Preference number: 6 (lower is better)
Translates to: PSITQAPTQAGSPSL*SLFAPGLRSSTDPA
Trigger: TGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGGTAGGCGCTTGGGTGATGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS CCA 72 bp CCCCTGACCTTCCATCACCCAAGCGCCTACCCAAGCTaGTTCTCCGAGCCTCTTGAGTCTGTTTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: PLTFHHPSAYPS*FSEPLESVCTR
Trigger: CCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGGTAGGCGCTTGGGTGATGGAAGGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS CAA 72 bp ACCCAAGCGCCTACCCAAGCTGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGCCTGCGCTCCTCTACA +
Preference number: 6 (lower is better)
Translates to: TQAPTQAGSPSL*SLFAPGLRSST
Trigger: TGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGGTAGGCGCTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS GCA 72 bp TACCCAAGCTGGTTCTCCGAGCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTCTACAGACCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: YPSWFSEPLESV*TRPALLYRPSR
Trigger: TCTGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275233.12
CDS GCA 72 bp ACTCCAAGCTGGTTCTCCGAGCCTCTTGAGTCTGTTTaGACCAGGCCTGCGCTCCTCTACAGACCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: TPSWFSEPLESV*TRPALLYRPSR
Trigger: TCTGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS CAA 90 bp TTCTTGGCTGGTAACTGTGAACTCCAAGCTGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGCCTGCGCTCCTCTACAGACCCAGCA +
Preference number: 6 (lower is better)
Translates to: FLAGNCELQAGSPSL*SLFAPGLRSSTDPA
Trigger: TGCTGGGTCTGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGTTCACAGTTACCAGCCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS TCA 72 bp TTTGTCTGTCCAATTCGGTGCACCCTCCCTATGGCCTaGAGCTCATGGGCAGGGTTCAATATGGGCTCCACC +
Preference number: 6 (lower is better)
Translates to: FVCPIRCTLPMA*SSWAGFNMGST
Trigger: GGTGGAGCCCATATTGAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGTGCACCGAATTGGACAGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000417762.5
ENST00000438092.6
ENST00000629427.2
CDS CAA 72 bp GGTAACTGTGAACTCCAAGCTGGTTCTCCGAGCCTCTaGAGTCTGTTTGCACCAGGCCTGCGCTCCTCTACA +
Preference number: 6 (lower is better)
Translates to: GNCELQAGSPSL*SLFAPGLRSST
Trigger: TGTAGAGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGTTCACAGTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367503.7
ENST00000367505.6
ENST00000519632.5
CDS TCA 72 bp CCACACTCTCCCAAGGTGACCAATGGCAGACAACTCTaGATCTGCAGTCCTGACCAAAGATGCAACGTCTGG +
Preference number: 6 (lower is better)
Translates to: PHSPKVTNGRQL*ICSPDQRCNVW
Trigger: CCAGACGTTGCATCTTTGGTCAGGACTGCAGATTCAGAGTTGTCTGCCATTGGTCACCTTGGGAGAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CCA 72 bp ACAACTCACAAATCACCAAATCTCTCAACTGTAGAATaGCAGTTGTCAGGGACCAGGGGTGGGAGAATGGGG +
Preference number: 6 (lower is better)
Translates to: TTHKSPNLSTVE*QLSGTRGGRMG
Trigger: CCCCATTCTCCCACCCCTGGTCCCTGACAACTGCCATTCTACAGTTGAGAGATTTGGTGATTTGTGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417762.5
CDS CAA 72 bp GGTCAGCCACAGTCAAGACAGAGGCCTCTGAATGCTTaGCTGATGAGTTCGTGTGACTTCTCTCAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: GQPQSRQRPLNA*LMSSCDFSQQF
Trigger: AAACTGCTGAGAGAAGTCACACGAACTCATCAGCAAAGCATTCAGAGGCCTCTGTCTTGACTGTGGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS GCA 72 bp AGAATTTGGGCTGTTTTTCCAGTAGTGTTGATGAGCTaGACCAAGCCATCCACACTCTCCCAAGGTGACCAA +
Preference number: 6 (lower is better)
Translates to: RIWAVFPVVLMS*TKPSTLSQGDQ
Trigger: TTGGTCACCTTGGGAGAGTGTGGATGGCTTGGTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CCA 72 bp GTAGAATGGCTGCCCTTCACAGGGATGTCCTCCTCCTaGTTTGCTTTCTCTGAGGTAAAGACATACGAGATT +
Preference number: 6 (lower is better)
Translates to: VEWLPFTGMSSS*FAFSEVKTYEI
Trigger: AATCTCGTATGTCTTTACCTCAGAGAAAGCAAACCAGGAGGAGGACATCCCTGTGAAGGGCAGCCATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000438092.6
ENST00000629427.2
CDS CAA 90 bp CCATGGAATGAATCAAGTGTAGTTCATTCAAGCTCTTCAGTTTCTTaGGTAAATAGGTCTGCCAGGTCAGCCACAGTCAAGACAGAGGCC +
Preference number: 6 (lower is better)
Translates to: PWNESSVVHSSSSVS*VNRSARSATVKTEA
Trigger: GGCCTCTGTCTTGACTGTGGCTGACCTGGCAGACCTATTTACCAAAGAAACTGAAGAGCTTGAATGAACTACACTTGATTCATTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS CAA 90 bp CATCTTCATCCTCTTCCAACACATCATGAGCAGAACTTGGAGAATTaGGGCTGTTTTTCCAGTAGTGTTGATGAGCTGCACCAAGCCATC +
Preference number: 6 (lower is better)
Translates to: HLHPLPTHHEQNLEN*GCFSSSVDELHQAI
Trigger: GATGGCTTGGTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGGATGAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CAA 90 bp TCTCCGGATCATCTTCATCCTCTTCCAACACATCATGAGCAGAACTaGGAGAATTTGGGCTGTTTTTCCAGTAGTGTTGATGAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: SPDHLHPLPTHHEQN*ENLGCFSSSVDELH
Trigger: GTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGGATGAAGATGATCCGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CCA 72 bp CTCTTCCAACACATCATGAGCAGAACTTGGAGAATTTaGGCTGTTTTTCCAGTAGTGTTGATGAGCTGCACC +
Preference number: 6 (lower is better)
Translates to: LFQHIMSRTWRI*AVFPVVLMSCT
Trigger: GGTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CAA 72 bp CCTCTTCCAACACATCATGAGCAGAACTTGGAGAATTaGGGCTGTTTTTCCAGTAGTGTTGATGAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: PLPTHHEQNLEN*GCFSSSVDELH
Trigger: GTGCAGCTCATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS TCA 72 bp TTTGTAGCCACCCCAAATCTTCTAACATTTCACCACTaGAGGATGACTCCACCAGAATACCCTTGTCACAAA +
Preference number: 6 (lower is better)
Translates to: FVATPNLLTFHH*RMTPPEYPCHK
Trigger: TTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000433355.6
ENST00000438092.6
ENST00000519632.5
ENST00000629427.2
CDS TCA 72 bp TGGGCAGGGTTCAATATGGGCTCCACCAAGAGAACATaGGTTGCTTCAATGATAGTTAATCCATTAGAACCT +
Preference number: 6 (lower is better)
Translates to: WAGFNMGSTKRT*VASMIVNPLEP
Trigger: AGGTTCTAATGGATTAACTATCATTGAAGCAACTCATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000417762.5
ENST00000438092.6
ENST00000629427.2
CDS TCA 72 bp ATTTACTTGCCAATTACCTCATGTGGTTCAATGATATaGAGAACAGGCGGATTAGGCTTTGGCTCCCTAGGA +
Preference number: 6 (lower is better)
Translates to: IYLPITSCGSMI*RTGGLGFGSLG
Trigger: TCCTAGGGAGCCAAAGCCTAATCCGCCTGTTCTTCATATCATTGAACCACATGAGGTAATTGGCAAGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS CAA 72 bp GAATCAAGTGTAGTTCATTCAAGCTCTTCAGTTTCTTaGGTAAATAGGTCTGCCAGGTCAGCCACAGTCAAG +
Preference number: 6 (lower is better)
Translates to: ESSVVHSSSSVS*VNRSARSATVK
Trigger: CTTGACTGTGGCTGACCTGGCAGACCTATTTACCAAAGAAACTGAAGAGCTTGAATGAACTACACTTGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000629427.2
CDS TCA 72 bp TGTGAGCCACTTCTTCCTTTAGACTATCACTTAGAATaGTATAATGAGCAGAAGAGGTATCTGAACCTGGGC +
Preference number: 6 (lower is better)
Translates to: CEPLLPLDYHLE*YNEQKRYLNLG
Trigger: GCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275233.12
ENST00000367505.6
ENST00000433355.6
ENST00000438092.6
ENST00000629427.2
CDS TCA 72 bp CCTGATTCTGCCTTTTCTATGGGTCTTAGATATCTGTaGCATCTGCTTGCTGTTCCCTTTTCTGTGATTTAC +
Preference number: 6 (lower is better)
Translates to: PDSAFSMGLRYL*HLLAVPFSVIY
Trigger: GTAAATCACAGAAAAGGGAACAGCAAGCAGATGTCACAGATATCTAAGACCCATAGAAAAGGCAGAATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS CCA 72 bp ATCTTCATCCTCTTCCAACACATCATGAGCAGAACTTaGAGAATTTGGGCTGTTTTTCCAGTAGTGTTGATG +
Preference number: 6 (lower is better)
Translates to: IFILFQHIMSRT*RIWAVFPVVLM
Trigger: CATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGGATGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS CAA 72 bp CATCTTCATCCTCTTCCAACACATCATGAGCAGAACTaGGAGAATTTGGGCTGTTTTTCCAGTAGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: HLHPLPTHHEQN*ENLGCFSSSVD
Trigger: ATCAACACTACTGGAAAAACAGCCCAAATTCTCCAAGTTCTGCTCATGATGTGTTGGAAGAGGATGAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521977.1
CDS TCA 72 bp AAAGAAAAGTTAAATGATCTGTTGCTCTGGCCTCAGTaGTTTCATGAAATCCAGGAAAGAATTTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: KEKLNDLLLWPQ*FHEIQERISLP
Trigger: GGGCAGAGAAATTCTTTCCTGGATTTCATGAAATCACTGAGGCCAGAGCAACAGATCATTTAACTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523276.1
CDS TCA 72 bp CATTTCAGCATCCGTTTCAAAAGACTCCTGTTCCGTTaGACATCGTATCTATATATAGAACTGACATACTTA +
Preference number: 6 (lower is better)
Translates to: HFSIRFKRLLFR*TSYLYIELTYL
Trigger: TAAGTATGTCAGTTCTATATATAGATACGATGTTCAACGGAACAGGAGTCTTTTGAAACGGATGCTGAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000433355.6
ENST00000438092.6
ENST00000519632.5
ENST00000629427.2
CDS CAA 72 bp ACATTTCAGCATCCGTTTCAAAAGACTCCTGTTCCGTaGAACATCGTATCTATATATAGAACTGACATACTT +
Preference number: 6 (lower is better)
Translates to: TFQHPFQKTPVP*NIVSIYRTDIL
Trigger: AAGTATGTCAGTTCTATATATAGATACGATGTTCAACGGAACAGGAGTCTTTTGAAACGGATGCTGAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275233.12
ENST00000367503.7
ENST00000367505.6
ENST00000433355.6
ENST00000438092.6
ENST00000519632.5
ENST00000629427.2