RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHOC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165181

Ensembl transcript IDs: ENST00000318737.8, ENST00000374283.5, ENST00000374287.7, ENST00000394777.8, ENST00000394779.7, ENST00000682571.1, ENST00000682672.1, ENST00000682961.1, ENST00000683745.1, ENST00000683944.1

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACTTTCTTGATGTGGGAGGGTTAACTGTGATGATCTTCACTTCCTaGCTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCT +
Preference number: 1 (lower is better)
Translates to: NFLDVGGLTVMIFTS*LKGSDCDGDSFKWP
Trigger: AGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTCAGGAAGTGAAGATCATCACAGTTAACCCTCCCACATCAAGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR CCA 90 bp TTTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTaGCAGAGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTT +
Preference number: 1 (lower is better)
Translates to: FFKKMGPREIQSHKF*QSQGLYGMLEPSDF
Trigger: AAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374283.5
3UTR-3UTR GCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCTTTAAATGGCCTGTGTaGAGGGGTGTCTGGAAGACA +
Preference number: 2 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFFKWPV*RGVWKT
Trigger: TGTCTTCCAGACACCCCTGCACACAGGCCATTTAAA...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTATGATCTTCACTTCCTaGCTCAAAGGGTCAGACTGT +
Preference number: 2 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSMIFTS*LKGSDC
Trigger: ACAGTCTGACCCTTTGAGTCAGGAAGTGAAGATCAT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR-3UTR CCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGTGTGCAGGGGTGTCTaGAAGACATTTTGGATCTTA +
Preference number: 2 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFVCRGV*KTFWIL
Trigger: TAAGATCCAAAATGTCTTCCAGACACCCCTGCACAC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGCAAATCTAAATAATTaGGCTAGTGGATTAGCATCA +
Preference number: 2 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFANLNN*ASGLAS
Trigger: TGATGCTAATCCACTAGCGCAATTATTTAGATTTGC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCAAAAACAGTGGAATATaGCATGTAACATTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFKNSGI*HVTLLF
Trigger: GAAGAGCAATGTTACATGCCATATTCCACTGTTTTT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR TCA 72 bp GATGTGGGAGGGTTAACTGTGATGATCTTCACTTCCTaGCTCAAAGGGTCAGACTGTGATGGAGACTCATTT +
Preference number: 3 (lower is better)
Translates to: DVGGLTVMIFTS*LKGSDCDGDSF
Trigger: AAATGAGTCTCCATCACAGTCTGACCCTTTGAGTCAGGAAGTGAAGATCATCACAGTTAACCCTCCCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
3UTR CCA 72 bp AAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTaGCAGAGCCAGGGCCTATATGGAATGCTAGAACCT +
Preference number: 3 (lower is better)
Translates to: KMGPREIQSHKF*QSQGLYGMLEP
Trigger: AGGTTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
3UTR TCA 72 bp GTTACTGCAAAATGCTGGTTTGCGTCTAGGCCAATGTaGACGGAAACTGCTAGCAATTTAATCATTTATAAA +
Preference number: 3 (lower is better)
Translates to: VTAKCWFASRPM*TETASNLIIYK
Trigger: TTTATAAATGATTAAATTGCTAGCAGTTTCCGTTCACATTGGCCTAGACGCAAACCAGCATTTTGCAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCCGCCCGCTGGACACGTaGCCACTGAGCCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: LEKSKVINSGRARAYMECRPLDT*PLSLHS
Trigger: AGAGTGCAGGCTCAGTGGTCACGTGTCCAGCGGGCG...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR GCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGAACCTCAGCCGAGTCTaGCCATCAACTCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGNLSRV*PSTLPG
Trigger: CCCTGGTAGAGTTGATGGGCAGACTCGGCTGAGGTT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGAAAACGGGGGACAACTaGCACTCTCTTCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGKTGDN*HSLLSV
Trigger: GACACTCAGAAGAGAGTGTCAGTTGTCCCCCGTTTT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGTGGACACGTGACCACTaGGCCTGCACTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLEWTRDH*ACTLCF
Trigger: GAAGCACAGAGTGCAGGCTCAGTGGTCACGTGTCCA...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGAGGAGGCAAAATGCTTaGCACTGGCTATCTGACGCT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGRRQNA*HWLSDA
Trigger: AGCGTCAGATAGCCAGTGCCAAGCATTTTGCCTCCT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCCTTTATTTAGCATaGGCTGAGCCACCAATGGGT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGVLYLA*AEPPMG
Trigger: ACCCATTGGTGGCTCAGCTCATGCTAAATAAAGGAC...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGTCCTGCATCTCTTCCTaGGGTAAAATTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLESCISS*GKIPAR
Trigger: GCGGGCGGGAATTTTACCCCAGGAAGAGATGCAGGA...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGCCATTGGTCCAAGACTaGGGTATCTGTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLEPLVQD*GICHSR
Trigger: CCGGGAATGACAGATACCTCAGTCTTGGACCAATGG...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTGGTTCACTCTGGCTTTaGATGGTCAAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGGSLWL*MVKISV
Trigger: CACAGAGATTTTGACCATTCAAAGCCAGAGTGAACC...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTCTGTTCCCCTTTCCTaGTTTATTTCCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGSVPLS*FISSRV
Trigger: AACCCTGGAGGAAATAAATCAGGAAAGGGGAACAGA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTTGGCACTGGCTATCTaGCGCTTGAATTTCAATGAC +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGLALAI*RLNFND
Trigger: GTCATTGAAATTCAAGCGTCAGATAGCCAGTGCCAA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTATTTGACTTCTGCTaGCCTTGGTCTTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGVFDFC*PWSSLH
Trigger: ATGCAGAGAAGACCAAGGTCAGCAGAAGTCAAATAC...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGCACTCTGGCTTTGAATaGTCAAAATCTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGHSGFE*SKSLWS
Trigger: GCTCCACAGAGATTTTGACCATTCAAAGCCAGAGTG...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTTTCAAATCTGTAACTaGATATTGGCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGFQICN*ILAVGL
Trigger: GAGCCCCACAGCCAATATTCAGTTACAGATTTGAAA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTAGAGAGCGGCATGCTTaGAAGTCATTTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGRERHA*KSFLFH
Trigger: ATGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCT...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTATTCCACCACAAATaGGAAATTACTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGVFHHK*EITPGE
Trigger: TTCCCCTGGAGTAATTTCTCATTTGTGGTGGAATAC...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCGCGTCTAGGCCAATGTaGACGGAAACTGCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LEKSKVINSGRARAYMECASRPM*TETASN
Trigger: ATTGCTAGCAGTTTCCGTTCACATTGGCCTAGACGC...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAACCTCAGCCGAGTCTaGCCATCAACTCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSNLSRV*PSTLPG
Trigger: CCCTGGTAGAGTTGATGGGCAGACTCGGCTGAGGTT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCTTGTATCTTGTAGTTaGTTTCAGGCTTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLVSCS*FQAFSP
Trigger: GGGGGAAAAAGCCTGAAACCAACTACAAGATACAAG...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTGTAGGGAATGGAGATaGTCTACAGTGCCTACAAAT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGCREWR*STVPTN
Trigger: ATTTGTAGGCACTGTAGACCATCTCCATTCCCTACA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCCATTGGTCCAAGACTaGGGTATCTGTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSPLVQD*GICHSR
Trigger: CCGGGAATGACAGATACCTCAGTCTTGGACCAATGG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTGGCTATCTGACGCTTaGATTTCAATGACACTATCT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGWLSDA*ISMTLS
Trigger: AGATAGTGTCATTGAAATTCAAGCGTCAGATAGCCA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTTGGATTCTAGCAGCTaGAGTATGTCTGGAGTATTA +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLDSSS*SMSGVL
Trigger: TAATACTCCAGACATACTTCAGCTGCTAGAATCCAA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTTCTTCCTCAGATGGTaGAACTTTAAGCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGFFLRW*NFKPGF
Trigger: AAATCCTGGCTTAAAGTTTCACCATCTGAGGAAGAA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTTATTTAGCATGAGCTaGGCCACCAATGGGTTAATA +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLFSMS*ATNGLI
Trigger: TATTAACCCATTGGTGGCTCAGCTCATGCTAAATAA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTGTAAGTTGAACGGGTaGTTCTCTTGTTCCCATATA +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGCKLNG*FSCSHI
Trigger: TATATGGGAACAAGAGAATCACCCGTTCAACTTACA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTGTAAGTTGAACGGGTaGTTCTCTTGTTCCCATATA +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGCKLNG*FSCSHI
Trigger: TATATGGGAACAAGAGAATCACCCGTTCAACTTACA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGCACCATATTGTAAGTTaGACGGGTGATTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGHHIVS*TGDSLV
Trigger: AACAAGAGAATCACCCGTTCAACTTACAATATGGTG...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCACCATATTGTAAGTTaGACGGGTGATTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGHHIVS*TGDSLV
Trigger: AACAAGAGAATCACCCGTTCAACTTACAATATGGTG...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGATCTGGTACTTCTTTTaGCAGAGATGGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGIWYFF*QRWTLL
Trigger: CAAAAGAGTCCATCTCTGGCAAAAGAAGTACCAGAT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTGTAAGAGAGCGGCATaGTTGAAAGTCATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGCKRAA*LKVISL
Trigger: AAGAGAAATGACTTTCAAGCATGCCGCTCTCTTACA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394779.7
CDS-3UTR GCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTTGTTACATGCAGTCTaGTGTGCACCATATTGTAAG +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLLHAV*CAPYCK
Trigger: CTTACAATATGGTGCACAGCAGACTGCATGTAACAA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGCACTGTAAGCAAAAATaGGTTCAAAGGGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGHCKQK*VQRAST
Trigger: TGTAGAAGCCCTTTGAACCCATTTTTGCTTACAGTG...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGCAGCTGAAGTATGTCTaGAGTATTAAGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGQLKYV*SIKKSF
Trigger: GAAGGACTTCTTAATACTCCAGACATACTTCAGCTG...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTTCGACAAATATCCTTaGCGAACAGCATCACTTACT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGFDKYP*RTASLT
Trigger: AGTAAGTGATGCTGTTCGCCAAGGATATTTGTCGAA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394777.8
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTATCAATTTCTGGTTTaGGGCTTGGAGGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGYQFLV*GLEVLR
Trigger: TCTTAATACCTCCAAGCCTCAAACCAGAAATTGATA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGGGTTCACTCTGGCTTTaGATGGTCAAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLEGSLWL*MVKISV
Trigger: CACAGAGATTTTGACCATTCAAAGCCAGAGTGAACC...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTGTGACTTCAGTCTTTaGGGTGCAAGTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGCDFSL*GASLIF
Trigger: AAATATAAGACTTGCACCTCAAAGACTGAAGTCACA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCTGAGTGTCAGTTGGTaGTTTTATAGTTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLSVSW*FYSFTV
Trigger: AACTGTGAAACTATAAAATCACCAACTGACACTCAG...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAAAACGGGGGACAACTaGCACTCTCTTCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSKTGDN*HSLLSV
Trigger: GACACTCAGAAGAGAGTGTCAGTTGTCCCCCGTTTT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGACTCTCCTGGTTTACTaGACTCTTCTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLETLLVY*TLLVHS
Trigger: AGAGTGAACCAGAAGAGTGCAGTAAACCAGGAGAGT...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR GCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGACTCCAGGGGAAATCTaGTCCAATATATTGATTATG +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGTPGEI*SNILIM
Trigger: CATAATCAATATATTGGAGCAGATTTCCCCTGGAGT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTGACCTTGGTCTTCTCTaGATCATTTTACCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGDLGLL*IILPLN
Trigger: ATTAAGAGGTAAAATGATGCAGAGAAGACCAAGGTC...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAGGAGGCAAAATGCTTaGCACTGGCTATCTGACGCT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSRRQNA*HWLSDA
Trigger: AGCGTCAGATAGCCAGTGCCAAGCATTTTGCCTCCT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTGTGAGATGTTATAGTTaGATTCTAGCAGCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGVRCYS*ILAAEV
Trigger: TACTTCAGCTGCTAGAATCCAACTATAACATCTCAC...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTGAGGTCATTAAACTGTaGTCAGCAATTTGTCGAATT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGEVIKL*SAICRI
Trigger: AATTCGACAAATTGCTGACCACAGTTTAATGACCTC...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTAGTTGTCATTCAAAATaGTGGTTTTGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGSCHSK*WFCLPA
Trigger: TGCAGGAAGACAAAACCACCATTTTGAATGACAACT...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGAGTTGTCATTCAAAATaGTGGTTTTGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGSCHSK*WFCLPA
Trigger: TGCAGGAAGACAAAACCACCATTTTGAATGACAACT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTGAAATAAATCCAAACTaGGGACAGATGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGEINPN*GQMVIL
Trigger: GAGAATTACCATCTGTCCCCAGTTTGGATTTATTTC...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTTTCAAATCTGTAACTaGATATTGGCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LEKSKVINSGRARAYMECFQICN*ILAVGL
Trigger: GAGCCCCACAGCCAATATTCAGTTACAGATTTGAAA...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTCCTTTATTTAGCATaGGCTGAGCCACCAATGGGT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVLYLA*AEPPMG
Trigger: ACCCATTGGTGGCTCAGCTCATGCTAAATAAAGGAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGAATTCTTCTAGATCCTaGAAAATTATGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGNSSRS*KIMAVC
Trigger: ACACACTGCCATAATTTTGCAGGATCTAGAAGAATT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTAATTCTTCTAGATCCTaGAAAATTATGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGNSSRS*KIMAVC
Trigger: ACACACTGCCATAATTTTGCAGGATCTAGAAGAATT...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAACCTCAGCCGAGTCTaGCCATCAACTCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMNLSRV*PSTLPG
Trigger: CCCTGGTAGAGTTGATGGGCAGACTCGGCTGAGGTT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTAACCTCAGCCGAGTCTaGCCATCAACTCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSNLSRV*PSTLPG
Trigger: CCCTGGTAGAGTTGATGGGCAGACTCGGCTGAGGTT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGGGGCTCTTGAATTCTTaGCACTGTAAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLEGLLNS*HCKQKW
Trigger: CCATTTTTGCTTACAGTGCCAAGAATTCAAGAGCCC...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCTGTTTACTGGTTCTTaGTCATTCTTTGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLFTGS*SFFGFS
Trigger: AGAAAAACCAAAGAATGACCAAGAACCAGTAAACAG...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTAAAAACAGTGGAATATaGCATGTAACATTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGKNSGI*HVTLLF
Trigger: GAAGAGCAATGTTACATGCCATATTCCACTGTTTTT...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp GAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTAGAAGTTACTGCAAAATGCTaGTTTGCGTCTAGGCCAATG +
Preference number: 4 (lower is better)
Translates to: EIQSHKFWQSQGLYGMLEVTAKC*FASRPM
Trigger: CATTGGCCTAGACGCAAACCAGCATTTTGCAGTAAC...TTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCTGACATGTAGGGAATaGAGATGGTCTACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLTCRE*RWSTVP
Trigger: AGGCACTGTAGACCATCTCCATTCCCTACATGTCAG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCCATTGGTCCAAGACTaGGGTATCTGTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMPLVQD*GICHSR
Trigger: CCGGGAATGACAGATACCTCAGTCTTGGACCAATGG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTGGGAGTCTGGATTTaGACTTGGAACAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLGVWI*TWNNFL
Trigger: GAGGAAGTTGTTCCAAGTTCAAATCCAGACTCCCAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR TCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGTGTGGGTGTATAAACTaGCCTCCTCTACTTCAATTT +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLECGCIN*PPLLQF
Trigger: AAATTGAAGTAGAGGAGGTCAGTTTATACACCCACA...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTCTGTTCCCCTTTCCTaGTTTATTTCCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSVPLS*FISSRV
Trigger: AACCCTGGAGGAAATAAATCAGGAAAGGGGAACAGA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTGGCACTGGCTATCTaGCGCTTGAATTTCAATGAC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLALAI*RLNFND
Trigger: GTCATTGAAATTCAAGCGTCAGATAGCCAGTGCCAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCGTAAATTTCAACATCTaGGGTAAAAATCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LEKSKVINSGRARAYMECVNFNI*GKNRLL
Trigger: CAGGAGGCGATTTTTACCTCAGATGTTGAAATTTAC...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCATCCCCCAGAGTCTCTaGCATGTAGGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFIPQSL*HVGNGD
Trigger: ATCTCCATTCCCTACATGTCAGAGACTCTGGGGGAT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCACTCTCCTGGTTTACTaGACTCTTCTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSTLLVY*TLLVHS
Trigger: AGAGTGAACCAGAAGAGTGCAGTAAACCAGGAGAGT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCGACAAATATCCCAATaGTGTGTCCAAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSRQISQ*CVQAAC
Trigger: ACATGCAGCTTGGACACAGCATTGGGATATTTGTCG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTTTCAATGACTCACTaGAGCCTCTCTCTACTAGTG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVSMTH*SLSLLV
Trigger: CACTAGTAGAGAGAGGCTGCAGTGAGTCATTGAAAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTCTCGGTCTCCACCCTaGCTTGTCTGGGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFSRSPP*LVWVSL
Trigger: TAAAGAAACCCAGACAAGGCAGGGTGGAGACCGAGA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCACTCTGGCTTTGAATaGTCAAAATCTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSHSGFE*SKSLWS
Trigger: GCTCCACAGAGATTTTGACCATTCAAAGCCAGAGTG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGTTTACTGCACTCTTCTaGTTCACTCTGGCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLEFTALF*FTLALN
Trigger: ATTCAAAGCCAGAGTGAACCAGAAGAGTGCAGTAAA...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTGTGCAGGGGTGTCTaGAAGACATTTTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVCRGV*KTFWIL
Trigger: TAAGATCCAAAATGTCTTCCAGACACCCCTGCACAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTATCCTCACATAACTTaGGCTTTTAACAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSYPHIT*AFNRSP
Trigger: TGGGCTCCTGTTAAAAGCTCAAGTTATGTGAGGATA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318737.8
CDS-3UTR TCA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTCTTGGTTCTGGTTTTaGAGTGCTGAACATTTTTCT +
Preference number: 4 (lower is better)
Translates to: LEKSKVINSGRARAYMECSWFWF*SAEHFS
Trigger: AGAAAAATGTTCAGCACTTCAAAACCAGAACCAAGA...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTTCAAATCTGTAACTaGATATTGGCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSFQICN*ILAVGL
Trigger: GAGCCCCACAGCCAATATTCAGTTACAGATTTGAAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAGAGAGCGGCATGCTTaGAAGTCATTTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSRERHA*KSFLFH
Trigger: ATGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTATCCAACCATTCATaGGGATCTCTCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLSNHS*GSLFEV
Trigger: GACCTCAAAGAGAGATCCTCATGAATGGTTGGATAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGTCCTTTATTTAGCATaGGCTGAGCCACCAATGGGT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFVLYLA*AEPPMG
Trigger: ACCCATTGGTGGCTCAGCTCATGCTAAATAAAGGAC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCACTGACACTCTCTTCTaGGTGTCAGTTGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSTDTLF*VSVGDF
Trigger: AAAATCACCAACTGACACTCAGAAGAGAGTGTCAGT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAAAACGGGGGACAACTaGCACTCTCTTCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMKTGDN*HSLLSV
Trigger: GACACTCAGAAGAGAGTGTCAGTTGTCCCCCGTTTT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGAAAGTCTCATCTTTTaGACTTTCACATGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSESLIF*TFTCEA
Trigger: GGCCTCACATGTGAAAGTTCAAAAGATGAGACTTTC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGATCCCCCAGAGTCTCTaGCATGTAGGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMIPQSL*HVGNGD
Trigger: ATCTCCATTCCCTACATGTCAGAGACTCTGGGGGAT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCTCCACAAAGAAACTTaGTTTCCATTGGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLHKET*FPLVQD
Trigger: GTCTTGGACCAATGGAAAGCAAGTTTCTTTGTGGAG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR GCA 90 bp TTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCGTAAAAATCGCCTCCTaGATCTCTTCCTGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: FSRKWDLEKSKVINSGRAVKIAS*ISSWGK
Trigger: TTTACCCCAGGAAGAGATGCAGGAGGCGATTTTTAC...GGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR GCA 90 bp TTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCACAGTTACTGCAAAATaGTGGTTTGCGTCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: FSRKWDLEKSKVINSGRATVTAK*WFASRP
Trigger: TGGCCTAGACGCAAACCAGCATTTTGCAGTAACTGT...GGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTCGGTCTCCACCCTaGCTTGTCTGGGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSSRSPP*LVWVSL
Trigger: TAAAGAAACCCAGACAAGGCAGGGTGGAGACCGAGA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTAAATGGCCTGTGTaGAGGGGTGTCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFFKWPV*RGVWKT
Trigger: TGTCTTCCAGACACCCCTGCACACAGGCCATTTAAA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGTCCTCTACTTCAATTTaGGAGTCTGGATTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLESSTSI*ESGFEL
Trigger: AAGTTCAAATCCAGACTCCCAAATTGAAGTAGAGGA...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp TTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCCACTCTGGCTTTGAATaGTCAAAATCTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FSRKWDLEKSKVINSGRAHSGFE*SKSLWS
Trigger: GCTCCACAGAGATTTTGACCATTCAAAGCCAGAGTG...GGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp GAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTAGAACACTGTAAGCAAAAATaGGTTCAAAGGGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: EIQSHKFWQSQGLYGMLEHCKQK*VQRAST
Trigger: TGTAGAAGCCCTTTGAACCCATTTTTGCTTACAGTG...TTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGGGCTCTTGAATTCTTaGCACTGTAAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSGLLNS*HCKQKW
Trigger: CCATTTTTGCTTACAGTGCCAAGAATTCAAGAGCCC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTAGGAGGCAAAATGCTTaGCACTGGCTATCTGACGCT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSRRQNA*HWLSDA
Trigger: AGCGTCAGATAGCCAGTGCCAAGCATTTTGCCTCCT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCTTGTATCTTGTAGTTaGTTTCAGGCTTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLVSCS*FQAFSP
Trigger: GGGGGAAAAAGCCTGAAACCAACTACAAGATACAAG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCCTGACATGTAGGGAATaGAGATGGTCTACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFLTCRE*RWSTVP
Trigger: AGGCACTGTAGACCATCTCCATTCCCTACATGTCAG...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp GAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTAGAAAAATCTCTGTGGAGCTaGATTTTATATCCCCGATAT +
Preference number: 4 (lower is better)
Translates to: EIQSHKFWQSQGLYGMLEKSLWS*ILYPRY
Trigger: ATATCGGGGATATAAAATTCAGCTCCACAGAGATTT...TTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGGCTATCTGACGCTTaGATTTCAATGACACTATCT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSWLSDA*ISMTLS
Trigger: AGATAGTGTCATTGAAATTCAAGCGTCAGATAGCCA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTGGATTCTAGCAGCTaGAGTATGTCTGGAGTATTA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLDSSS*SMSGVL
Trigger: TAATACTCCAGACATACTTCAGCTGCTAGAATCCAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTCTTCCTCAGATGGTaGAACTTTAAGCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSFFLRW*NFKPGF
Trigger: AAATCCTGGCTTAAAGTTTCACCATCTGAGGAAGAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTATTTAGCATGAGCTaGGCCACCAATGGGTTAATA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLFSMS*ATNGLI
Trigger: TATTAACCCATTGGTGGCTCAGCTCATGCTAAATAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTCCTTTATTTAGCATaGGCTGAGCCACCAATGGGT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVLYLA*AEPPMG
Trigger: ACCCATTGGTGGCTCAGCTCATGCTAAATAAAGGAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGTAAGTTGAACGGGTaGTTCTCTTGTTCCCATATA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSCKLNG*FSCSHI
Trigger: TATATGGGAACAAGAGAATCACCCGTTCAACTTACA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCACCATATTGTAAGTTaGACGGGTGATTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSHHIVS*TGDSLV
Trigger: AACAAGAGAATCACCCGTTCAACTTACAATATGGTG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCATGATCTTCACTTCCTaGCTCAAAGGGTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFMIFTS*LKGSDC
Trigger: ACAGTCTGACCCTTTGAGTCAGGAAGTGAAGATCAT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCCTCCACAAAGAAACTTaGTTTCCATTGGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FSRKWDLEKSKVINSGRALHKET*FPLVQD
Trigger: GTCTTGGACCAATGGAAAGCAAGTTTCTTTGTGGAG...GGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCATCTGGTACTTCTTTTaGCAGAGATGGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSIWYFF*QRWTLL
Trigger: CAAAAGAGTCCATCTCTGGCAAAAGAAGTACCAGAT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGTAAGAGAGCGGCATaGTTGAAAGTCATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSCKRAA*LKVISL
Trigger: AAGAGAAATGACTTTCAAGCATGCCGCTCTCTTACA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGTTTCAATGACTCACTaGAGCCTCTCTCTACTAGTG +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFVSMTH*SLSLLV
Trigger: CACTAGTAGAGAGAGGCTGCAGTGAGTCATTGAAAC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTGTTACATGCAGTCTaGTGTGCACCATATTGTAAG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLLHAV*CAPYCK
Trigger: CTTACAATATGGTGCACAGCAGACTGCATGTAACAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTTACTGCACTCTTCTaGTTCACTCTGGCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSFTALF*FTLALN
Trigger: ATTCAAAGCCAGAGTGAACCAGAAGAGTGCAGTAAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCACTGTAAGCAAAAATaGGTTCAAAGGGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSHCKQK*VQRAST
Trigger: TGTAGAAGCCCTTTGAACCCATTTTTGCTTACAGTG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTCATCAATTGTACCTTaGCGAACAGCATCACTTACT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSSIVP*RTASLT
Trigger: AGTAAGTGATGCTGTTCGCCAAGGTACAATTGATGA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCAGCTGAAGTATGTCTaGAGTATTAAGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSQLKYV*SIKKSF
Trigger: GAAGGACTTCTTAATACTCCAGACATACTTCAGCTG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGTCATTCAAAATGGTaGTTTTGTCTTCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSCHSKW*FCLPAL
Trigger: CAGTGCAGGAAGACAAAACCACCATTTTGAATGACA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTCCACCCTGCCTTGTCTaGGTTTCTTTAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSPPCLV*VSLESW
Trigger: CCAAGATTCTAAAGAAACCCAGACAAGGCAGGGTGG...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCCCACCCTGCCTTGTCTaGGTTTCTTTAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFPPCLV*VSLESW
Trigger: CCAAGATTCTAAAGAAACCCAGACAAGGCAGGGTGG...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGTGTGCAGGGGTGTCTaGAAGACATTTTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFVCRGV*KTFWIL
Trigger: TAAGATCCAAAATGTCTTCCAGACACCCCTGCACAC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTCTTGGTTCTGGTTTTaGAGTGCTGAACATTTTTCT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSWFWF*SAEHFS
Trigger: AGAAAAATGTTCAGCACTTCAAAACCAGAACCAAGA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTATCAATTTCTGGTTTaGGGCTTGGAGGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSYQFLV*GLEVLR
Trigger: TCTTAATACCTCCAAGCCTCAAACCAGAAATTGATA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAAATCTCTGTGGAGCTaGATTTTATATCCCCGATAT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSKSLWS*ILYPRY
Trigger: ATATCGGGGATATAAAATTCAGCTCCACAGAGATTT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGGTTCACTCTGGCTTTaGATGGTCAAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMGSLWL*MVKISV
Trigger: CACAGAGATTTTGACCATTCAAAGCCAGAGTGAACC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAGACATGATTCTAATTaGAGCACTTTCGTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSRHDSN*STFVGK
Trigger: TTTGCCTACGAAAGTGCTTCAATTAGAATCATGTCT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGTGACTTCAGTCTTTaGGGTGCAAGTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSCDFSL*GASLIF
Trigger: AAATATAAGACTTGCACCTCAAAGACTGAAGTCACA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCTGTTCCCCTTTCCTaGTTTATTTCCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSVPLS*FISSRV
Trigger: AACCCTGGAGGAAATAAATCAGGAAAGGGGAACAGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTGGCACTGGCTATCTaGCGCTTGAATTTCAATGAC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLALAI*RLNFND
Trigger: GTCATTGAAATTCAAGCGTCAGATAGCCAGTGCCAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCACTACATAACACTCTaGACTTCCAAAGAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSHYITL*TSKEFQ
Trigger: TTGAAACTCTTTGGAAGTTCAGAGTGTTATGTAGTG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGAAAGTCTCATCTTTTaGACTTTCACATGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFESLIF*TFTCEA
Trigger: GGCCTCACATGTGAAAGTTCAAAAGATGAGACTTTC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGTATTTGACTTCTGCTaGCCTTGGTCTTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFVFDFC*PWSSLH
Trigger: ATGCAGAGAAGACCAAGGTCAGCAGAAGTCAAATAC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGATGATCTTCACTTCCTaGCTCAAAGGGTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMMIFTS*LKGSDC
Trigger: ACAGTCTGACCCTTTGAGTCAGGAAGTGAAGATCAT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCATCTATCCAGCAAGGTaGTTCTTTCTAAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSIYPAR*FFLKLC
Trigger: ACACAGTTTTAGAAAGAAGCACCTTGCTGGATAGAT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTTTCAATGACTCACTaGAGCCTCTCTCTACTAGTG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVSMTH*SLSLLV
Trigger: CACTAGTAGAGAGAGGCTGCAGTGAGTCATTGAAAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTGTTTCAATGACTCACTaGAGCCTCTCTCTACTAGTG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSVSMTH*SLSLLV
Trigger: CACTAGTAGAGAGAGGCTGCAGTGAGTCATTGAAAC...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGGAGATGGTCTACAGTaGCTACAAATGAGACTGATT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFGDGLQ*LQMRLI
Trigger: AATCAGTCTCATTTGTAGGCACTGTAGACCATCTCC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAGGAGCCCAACACATTaGACTACTACTTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMRSPTH*TTTSFL
Trigger: CAAGAAGGAAGTAGTAGTCCAATGTGTTGGGCTCCT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318737.8
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTCCTCTACTTCAATTTaGGAGTCTGGATTTGAACTT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSSTSI*ESGFEL
Trigger: AAGTTCAAATCCAGACTCCCAAATTGAAGTAGAGGA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCCTTGTATCTTGTAGTTaGTTTCAGGCTTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFLVSCS*FQAFSP
Trigger: GGGGGAAAAAGCCTGAAACCAACTACAAGATACAAG...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTGAGATGTTATAGTTaGATTCTAGCAGCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVRCYS*ILAAEV
Trigger: TACTTCAGCTGCTAGAATCCAACTATAACATCTCAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAGTTGTCATTCAAAATaGTGGTTTTGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSCHSK*WFCLPA
Trigger: TGCAGGAAGACAAAACCACCATTTTGAATGACAACT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCTATCAATTTCTGGTTTaGGGCTTGGAGGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: FSRKWDLEKSKVINSGRAYQFLV*GLEVLR
Trigger: TCTTAATACCTCCAAGCCTCAAACCAGAAATTGATA...GGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAGAGAGCGGCATGCTTaGAAGTCATTTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMRERHA*KSFLFH
Trigger: ATGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTATTCCACCACAAATaGGAAATTACTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVFHHK*EITPGE
Trigger: TTCCCCTGGAGTAATTTCTCATTTGTGGTGGAATAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGTATTCCACCACAAATaGGAAATTACTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFVFHHK*EITPGE
Trigger: TTCCCCTGGAGTAATTTCTCATTTGTGGTGGAATAC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTTATCCAACCATTCATaGGGATCTCTCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSLSNHS*GSLFEV
Trigger: GACCTCAAAGAGAGATCCTCATGAATGGTTGGATAA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCTTATCCAACCATTCATaGGGATCTCTCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFLSNHS*GSLFEV
Trigger: GACCTCAAAGAGAGATCCTCATGAATGGTTGGATAA...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTATTTAGCATGAGCTaGGCCACCAATGGGTTAATA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFLFSMS*ATNGLI
Trigger: TATTAACCCATTGGTGGCTCAGCTCATGCTAAATAA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTACTGACACTCTCTTCTaGGTGTCAGTTGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSTDTLF*VSVGDF
Trigger: AAAATCACCAACTGACACTCAGAAGAGAGTGTCAGT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCACTGACACTCTCTTCTaGGTGTCAGTTGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFTDTLF*VSVGDF
Trigger: AAAATCACCAACTGACACTCAGAAGAGAGTGTCAGT...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGAAAGTCTCATCTTTTaGACTTTCACATGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMESLIF*TFTCEA
Trigger: GGCCTCACATGTGAAAGTTCAAAAGATGAGACTTTC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGAAAGTCTCATCTTTTaGACTTTCACATGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFESLIF*TFTCEA
Trigger: GGCCTCACATGTGAAAGTTCAAAAGATGAGACTTTC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCTCCACAAAGAAACTTaGTTTCCATTGGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLHKET*FPLVQD
Trigger: GTCTTGGACCAATGGAAAGCAAGTTTCTTTGTGGAG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGGTTTTTCTTCTTTTaGTGCTCCTTTATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSWFFFF*CSFIRE
Trigger: TTCTCTGATAAAGGAGCAGCAAAAGAAGAAAAACCA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTTGTAGATATCTTTTaGCTTCGACAAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVVDIF*LRQISQ
Trigger: TTGGGATATTTGTCGAAGGCAAAAGATATCTACAAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTGATGCTACAAAAATaGTTTAACACTTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVMLQK*FNTFSG
Trigger: CCCAGAAAAAGTGTTAAAGCATTTTTGTAGCATCAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGCAAATCTAAATAATTaGGCTAGTGGATTAGCATCA +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSANLNN*ASGLAS
Trigger: TGATGCTAATCCACTAGCGCAATTATTTAGATTTGC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCCACTGTAAGCAAAAATaGGTTCAAAGGGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFHCKQK*VQRAST
Trigger: TGTAGAAGCCCTTTGAACCCATTTTTGCTTACAGTG...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGGGCTCTTGAATTCTTaGCACTGTAAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMGLLNS*HCKQKW
Trigger: CCATTTTTGCTTACAGTGCCAAGAATTCAAGAGCCC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTGGGCTCTTGAATTCTTaGCACTGTAAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSGLLNS*HCKQKW
Trigger: CCATTTTTGCTTACAGTGCCAAGAATTCAAGAGCCC...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGGGCTCTTGAATTCTTaGCACTGTAAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFGLLNS*HCKQKW
Trigger: CCATTTTTGCTTACAGTGCCAAGAATTCAAGAGCCC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCTGTTTACTGGTTCTTaGTCATTCTTTGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLFTGS*SFFGFS
Trigger: AGAAAAACCAAAGAATGACCAAGAACCAGTAAACAG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGATTATTCTGTTTACTaGTTCTTGGTCATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSDYSVY*FLVILW
Trigger: CCAAAGAATGACCAAGAACCAGTAAACAGAATAATC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCCAGCTGAAGTATGTCTaGAGTATTAAGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFQLKYV*SIKKSF
Trigger: GAAGGACTTCTTAATACTCCAGACATACTTCAGCTG...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGTGGGTGTATAAACTaGCCTCCTCTACTTCAATTT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMCGCIN*PPLLQF
Trigger: AAATTGAAGTAGAGGAGGTCAGTTTATACACCCACA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR TCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCAAATCTCTGTGGAGCTaGATTTTATATCCCCGATAT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFKSLWS*ILYPRY
Trigger: ATATCGGGGATATAAAATTCAGCTCCACAGAGATTT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGGCTATCTGACGCTTaGATTTCAATGACACTATCT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMWLSDA*ISMTLS
Trigger: AGATAGTGTCATTGAAATTCAAGCGTCAGATAGCCA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCTGGCTATCTGACGCTTaGATTTCAATGACACTATCT +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFWLSDA*ISMTLS
Trigger: AGATAGTGTCATTGAAATTCAAGCGTCAGATAGCCA...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTGGATTCTAGCAGCTaGAGTATGTCTGGAGTATTA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLDSSS*SMSGVL
Trigger: TAATACTCCAGACATACTTCAGCTGCTAGAATCCAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTTGGATTCTAGCAGCTaGAGTATGTCTGGAGTATTA +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSLDSSS*SMSGVL
Trigger: TAATACTCCAGACATACTTCAGCTGCTAGAATCCAA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTCTTCCTCAGATGGTaGAACTTTAAGCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMFFLRW*NFKPGF
Trigger: AAATCCTGGCTTAAAGTTTCACCATCTGAGGAAGAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTATTTAGCATGAGCTaGGCCACCAATGGGTTAATA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLFSMS*ATNGLI
Trigger: TATTAACCCATTGGTGGCTCAGCTCATGCTAAATAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCAGAAGCTGAACTTTaGGAAGACAAGGTACTAATC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSEAEL*EDKVLI
Trigger: GATTAGTACCTTGTCTTCTCAAAGTTCAGCTTCTGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCTCAGAAGCTGAACTTTaGGAAGACAAGGTACTAATC +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFSEAEL*EDKVLI
Trigger: GATTAGTACCTTGTCTTCTCAAAGTTCAGCTTCTGA...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGTAAGTTGAACGGGTaGTTCTCTTGTTCCCATATA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMCKLNG*FSCSHI
Trigger: TATATGGGAACAAGAGAATCACCCGTTCAACTTACA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCACCATATTGTAAGTTaGACGGGTGATTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMHHIVS*TGDSLV
Trigger: AACAAGAGAATCACCCGTTCAACTTACAATATGGTG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAGAAATAGAAGTATTTaGCTTCTGCTGACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMRNRSI*LLLTLV
Trigger: GACCAAGGTCAGCAGAAGTCAAATACTTCTATTTCT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTAGAAATAGAAGTATTTaGCTTCTGCTGACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSRNRSI*LLLTLV
Trigger: GACCAAGGTCAGCAGAAGTCAAATACTTCTATTTCT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGATCTGGTACTTCTTTTaGCAGAGATGGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMIWYFF*QRWTLL
Trigger: CAAAAGAGTCCATCTCTGGCAAAAGAAGTACCAGAT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTTGTTACATGCAGTCTaGTGTGCACCATATTGTAAG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSLLHAV*CAPYCK
Trigger: CTTACAATATGGTGCACAGCAGACTGCATGTAACAA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTACAATTTGTTACATaGAGTCTGCTGTGCACCATA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVQFVT*SLLCTI
Trigger: TATGGTGCACAGCAGACTGCATGTAACAAATTGTAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTGTACAATTTGTTACATaGAGTCTGCTGTGCACCATA +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSVQFVT*SLLCTI
Trigger: TATGGTGCACAGCAGACTGCATGTAACAAATTGTAC...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGACCTTGGTCTTCTCTaGATCATTTTACCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFDLGLL*IILPLN
Trigger: ATTAAGAGGTAAAATGATGCAGAGAAGACCAAGGTC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTTACTGCACTCTTCTaGTTCACTCTGGCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMFTALF*FTLALN
Trigger: ATTCAAAGCCAGAGTGAACCAGAAGAGTGCAGTAAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCATCAATTGTACCTTaGCGAACAGCATCACTTACT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSSIVP*RTASLT
Trigger: AGTAAGTGATGCTGTTCGCCAAGGTACAATTGATGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCAGCTGAAGTATGTCTaGAGTATTAAGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMQLKYV*SIKKSF
Trigger: GAAGGACTTCTTAATACTCCAGACATACTTCAGCTG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGTGAGATGTTATAGTTaGATTCTAGCAGCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFVRCYS*ILAAEV
Trigger: TACTTCAGCTGCTAGAATCCAACTATAACATCTCAC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGTCATTCAAAATGGTaGTTTTGTCTTCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMCHSKW*FCLPAL
Trigger: CAGTGCAGGAAGACAAAACCACCATTTTGAATGACA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTGTCATTCAAAATGGTaGTTTTGTCTTCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSCHSKW*FCLPAL
Trigger: CAGTGCAGGAAGACAAAACCACCATTTTGAATGACA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCTTGGTTCTGGTTTTaGAGTGCTGAACATTTTTCT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSWFWF*SAEHFS
Trigger: AGAAAAATGTTCAGCACTTCAAAACCAGAACCAAGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTATCAATTTCTGGTTTaGGGCTTGGAGGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMYQFLV*GLEVLR
Trigger: TCTTAATACCTCCAAGCCTCAAACCAGAAATTGATA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAAATCTCTGTGGAGCTaGATTTTATATCCCCGATAT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMKSLWS*ILYPRY
Trigger: ATATCGGGGATATAAAATTCAGCTCCACAGAGATTT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTAAATCTCTGTGGAGCTaGATTTTATATCCCCGATAT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSKSLWS*ILYPRY
Trigger: ATATCGGGGATATAAAATTCAGCTCCACAGAGATTT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAGACATGATTCTAATTaGAGCACTTTCGTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMRHDSN*STFVGK
Trigger: TTTGCCTACGAAAGTGCTTCAATTAGAATCATGTCT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCAGACATGATTCTAATTaGAGCACTTTCGTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFRHDSN*STFVGK
Trigger: TTTGCCTACGAAAGTGCTTCAATTAGAATCATGTCT...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGACCTTAATTTGCTGTTaGCTTTGCATCCAACTTAGT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMTLICC*LCIQLS
Trigger: ACTAAGTTGGATGCAAAGTCAACAGCAAATTAAGGT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTACCTTAATTTGCTGTTaGCTTTGCATCCAACTTAGT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSTLICC*LCIQLS
Trigger: ACTAAGTTGGATGCAAAGTCAACAGCAAATTAAGGT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTCACTACATAACACTCTaGACTTCCAAAGAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSHYITL*TSKEFQ
Trigger: TTGAAACTCTTTGGAAGTTCAGAGTGTTATGTAGTG...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCACTACATAACACTCTaGACTTCCAAAGAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMHYITL*TSKEFQ
Trigger: TTGAAACTCTTTGGAAGTTCAGAGTGTTATGTAGTG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCTGAGTGTCAGTTGGTaGTTTTATAGTTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLSVSW*FYSFTV
Trigger: AACTGTGAAACTATAAAATCACCAACTGACACTCAG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR TCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCCTGAGTGTCAGTTGGTaGTTTTATAGTTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFLSVSW*FYSFTV
Trigger: AACTGTGAAACTATAAAATCACCAACTGACACTCAG...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCGTTGTAGATATCTTTTaGCTTCGACAAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFVVDIF*LRQISQ
Trigger: TTGGGATATTTGTCGAAGGCAAAAGATATCTACAAC...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGACTCCAGGGGAAATCTaGTCCAATATATTGATTATG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMTPGEI*SNILIM
Trigger: CATAATCAATATATTGGAGCAGATTTCCCCTGGAGT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGATCTATCCAGCAAGGTaGTTCTTTCTAAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMIYPAR*FFLKLC
Trigger: ACACAGTTTTAGAAAGAAGCACCTTGCTGGATAGAT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCATCTATCCAGCAAGGTaGTTCTTTCTAAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFIYPAR*FFLKLC
Trigger: ACACAGTTTTAGAAAGAAGCACCTTGCTGGATAGAT...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTATCTATCCAGCAAGGTaGTTCTTTCTAAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSIYPAR*FFLKLC
Trigger: ACACAGTTTTAGAAAGAAGCACCTTGCTGGATAGAT...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTCTGTTCATATATTTTaGCCGTTCTTCTATCAGGTT +
Preference number: 4 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFSVHIF*PFFYQV
Trigger: AACCTGATAGAAGAACGGGCAAAATATATGAACAGA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCCTCTACTTCAATTTaGGAGTCTGGATTTGAACTT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSSTSI*ESGFEL
Trigger: AAGTTCAAATCCAGACTCCCAAATTGAAGTAGAGGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGGAATATCAATTTCTaGTTTGAGGCTTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMWNINF*FEAWRY
Trigger: ATACCTCCAAGCCTCAAACCAGAAATTGATATTCCA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTGAGATGTTATAGTTaGATTCTAGCAGCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVRCYS*ILAAEV
Trigger: TACTTCAGCTGCTAGAATCCAACTATAACATCTCAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGAGGTCATTAAACTGTaGTCAGCAATTTGTCGAATT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMEVIKL*SAICRI
Trigger: AATTCGACAAATTGCTGACCACAGTTTAATGACCTC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGAGGTCATTAAACTGTaGTCAGCAATTTGTCGAATT +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFEVIKL*SAICRI
Trigger: AATTCGACAAATTGCTGACCACAGTTTAATGACCTC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAGTTGTCATTCAAAATaGTGGTTTTGTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSCHSK*WFCLPA
Trigger: TGCAGGAAGACAAAACCACCATTTTGAATGACAACT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGAAATAAATCCAAACTaGGGACAGATGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMEINPN*GQMVIL
Trigger: GAGAATTACCATCTGTCCCCAGTTTGGATTTATTTC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGAAATAAATCCAAACTaGGGACAGATGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFEINPN*GQMVIL
Trigger: GAGAATTACCATCTGTCCCCAGTTTGGATTTATTTC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGGTTTTTCTTCTTTTaGTGCTCCTTTATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMWFFFF*CSFIRE
Trigger: TTCTCTGATAAAGGAGCAGCAAAAGAAGAAAAACCA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCTGGTTTTTCTTCTTTTaGTGCTCCTTTATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFWFFFF*CSFIRE
Trigger: TTCTCTGATAAAGGAGCAGCAAAAGAAGAAAAACCA...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTTGTAGATATCTTTTaGCTTCGACAAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVVDIF*LRQISQ
Trigger: TTGGGATATTTGTCGAAGGCAAAAGATATCTACAAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAATTCTTCTAGATCCTaGAAAATTATGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMNSSRS*KIMAVC
Trigger: ACACACTGCCATAATTTTGCAGGATCTAGAAGAATT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTGTGATGCTACAAAAATaGTTTAACACTTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSVMLQK*FNTFSG
Trigger: CCCAGAAAAAGTGTTAAAGCATTTTTGTAGCATCAC...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTGATGCTACAAAAATaGTTTAACACTTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVMLQK*FNTFSG
Trigger: CCCAGAAAAAGTGTTAAAGCATTTTTGTAGCATCAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGCAAATCTAAATAATTaGGCTAGTGGATTAGCATCA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMANLNN*ASGLAS
Trigger: TGATGCTAATCCACTAGCGCAATTATTTAGATTTGC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGCAAATCTAAATAATTaGGCTAGTGGATTAGCATCA +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFANLNN*ASGLAS
Trigger: TGATGCTAATCCACTAGCGCAATTATTTAGATTTGC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR GCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTTGTAGATATCTTTTaGCTTCGACAAATATCCTTG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVVDIF*LRQISL
Trigger: CAAGGATATTTGTCGAAGGCAAAAGATATCTACAAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394777.8
CDS-3UTR GCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTGTTCATATATTTTaGCCGTTCTTCTATCAGGTT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSSVHIF*PFFYQV
Trigger: AACCTGATAGAAGAACGGGCAAAATATATGAACAGA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCTGTTTACTGGTTCTTaGTCATTCTTTGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLFTGS*SFFGFS
Trigger: AGAAAAACCAAAGAATGACCAAGAACCAGTAAACAG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTCTGTTTACTGGTTCTTaGTCATTCTTTGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSLFTGS*SFFGFS
Trigger: AGAAAAACCAAAGAATGACCAAGAACCAGTAAACAG...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGATTATTCTGTTTACTaGTTCTTGGTCATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMDYSVY*FLVILW
Trigger: CCAAAGAATGACCAAGAACCAGTAAACAGAATAATC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGATTATTCTGTTTACTaGTTCTTGGTCATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFDYSVY*FLVILW
Trigger: CCAAAGAATGACCAAGAACCAGTAAACAGAATAATC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTGATTATTCTGTTTACTaGTTCTTGGTCATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSDYSVY*FLVILW
Trigger: CCAAAGAATGACCAAGAACCAGTAAACAGAATAATC...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAAGAGAAACCTTGTTTaGTCAAAAATAACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMKRNLV*SKITVA
Trigger: TGCCACTGTTATTTTTGACCAAACAAGGTTTCTCTT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CCA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAAAAACAGTGGAATATaGCATGTAACATTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NLNNCASGLASKTVEYGMKNSGI*HVTLLF
Trigger: GAAGAGCAATGTTACATGCCATATTCCACTGTTTTT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS GCA 90 bp TCAGGAAAGCTGCCCAGGGCAAATGAAGTCTTCATATGCCACACTTaGACAGCAGCTGAAGAACCCCAGAAAGCAGTCCACCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SGKLPRANEVFICHT*TAAEEPQKAVHLGL
Trigger: CAAACCCAGGTGGACTGCTTTCTGGGGTTCTTCAGCTGCTGTGCAAGTGTGGCATATGAAGACTTCATTTGCCCTGGGCAGCTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682672.1
CDS GCA 90 bp AGCCTAGGATTCATTGTGAACTGGTCCCGTAAGGCTCAGGAAAGCTaGCCAGGGCAAATGAAGTCTTCATATGCCACACTTGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: SLGFIVNWSRKAQES*PGQMKSSYATLAQQ
Trigger: CTGCTGTGCAAGTGTGGCATATGAAGACTTCATTTGCCCTGGGCAGCTTTCCTGAGCCTTACGGGACCAGTTCACAATGAATCCTAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682672.1
CDS-3UTR CAA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTTGGCTGTGGGGCTCTaGAATTCTTGGCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLAVGL*NSWHCK
Trigger: CTTACAGTGCCAAGAATTCAAGAGCCCCACAGCCAA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGCTTCGACAAATATCCTaGGCGAACAGCATCACTTAC +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGLRQIS*ANSITY
Trigger: GTAAGTGATGCTGTTCGCCAAGGATATTTGTCGAAG...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394777.8
CDS-3UTR CAA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTTGGTTCACTCTGGCTTaGAATGGTCAAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGWFTLA*NGQNLC
Trigger: ACAGAGATTTTGACCATTCAAAGCCAGAGTGAACCA...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGACTGTGGTCAGCAATTaGTCGAATTATCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGTVVSN*SNYQGS
Trigger: ACTGCCTTGATAATTCGACAAATTGCTGACCACAGT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTAGAATTGGCTGTGGGGCTCTaGAATTCTTGGCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: EIQSHKFWQSQGLYGMLELAVGL*NSWHCK
Trigger: CTTACAGTGCCAAGAATTCAAGAGCCCCACAGCCAA...TTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGCAGTGTGTTCATCAATaGTCACCACTACATAACACT +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGQCVHQ*SPLHNT
Trigger: AGTGTTATGTAGTGGTGACAATTGATGAACACACTG...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGATATGGCATGTAACATaGCTCTTCTCCTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGIWHVT*LFSSFK
Trigger: TTTGAAGGAGGAGAAGAGCAATGTTACATGCCATAT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS TCA 90 bp CTGTCATTCCCGGAACTGAAACAGCTGAGATATCCTCACATAACTTaGGCTTTTAACAGGAGCCCAACACATTGGACTACTACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LSFPELKQLRYPHIT*AFNRSPTHWTTTSF
Trigger: GAAGGAAGTAGTAGTCCAATGTGTTGGGCTCCTGTTAAAAGCTCAAGTTATGTGAGGATATCTCAGCTGTTTCAGTTCCGGGAATGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683745.1
CDS-3UTR CAA 90 bp AGCCAGGGCCTATATGGAATGCTAGAACCTAGTGATTTTCCCAATTACCTAGAGCCTCCACAAAGAAACTaGCTTTCCATTGGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SQGLYGMLEPSDFPNYLEPPQRN*LSIGPR
Trigger: TCTTGGACCAATGGAAAGCAAGTTTCTTTGTGGAGG...CTCTAGGTAATTGGGAAAATCACTAGGTTCTAGCATTCCATATAGGCCCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTGGCTGTGGGGCTCTaGAATTCTTGGCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLAVGL*NSWHCK
Trigger: CTTACAGTGCCAAGAATTCAAGAGCCCCACAGCCAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTAATAGGACTTTCTTCTaGAAGTGTCAAAGAACATGC +
Preference number: 5 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGNRTFF*KCQRTC
Trigger: GCATGTTCTTTGACACTTCAAGAAGAAAGTCCTATT...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGTGTTGTAGATATCTTTaGCCTTCGACAAATATCCCA +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGCCRYL*PSTNIP
Trigger: TGGGATATTTGTCGAAGGCAAAAGATATCTACAACA...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394779.7
CDS-3UTR CAA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCTGACATTGCAATTCTaGTATCTTGTAGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGLTLQF*YLVVGF
Trigger: GAAACCAACTACAAGATACAAGAATTGCAATGTCAG...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGAATCAGTACCTTAATTaGCTGTTGACTTTGCATCCA +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGNQYLN*LLTLHP
Trigger: TGGATGCAAAGTCAACAGCAAATTAAGGTACTGATT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTCCTGTTAATGATTCCTaGTCTCCTGAGTTAAATGAA +
Preference number: 5 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGPVNDS*SPELNE
Trigger: TTCATTTAACTCAGGAGACAAGGAATCATTAACAGG...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTAGAACTGCAAAATGCTGGTTaGCGTCTAGGCCAATGTGAA +
Preference number: 5 (lower is better)
Translates to: EIQSHKFWQSQGLYGMLELQNAG*RLGQCE
Trigger: TTCACATTGGCCTAGACGCAAACCAGCATTTTGCAG...TTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CAA 90 bp GACTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGATCTGTTCATATATTTaGCCCGTTCTTCTATCAGGT +
Preference number: 5 (lower is better)
Translates to: DSKGQTVMETHLNGLCAGICSYI*PVLLSG
Trigger: ACCTGATAGAAGAACGGGCAAAATATATGAACAGAT...CCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp CTCAAAGGGTCAGACTGTGATGGAGACTCATTTAAATGGCCTGTGTGCAGGGGTATCTGTTCATATATTTaGCCCGTTCTTCTATCAGGT +
Preference number: 5 (lower is better)
Translates to: LKGSDCDGDSFKWPVCRGICSYI*PVLLSG
Trigger: ACCTGATAGAAGAACGGGCAAAATATATGAACAGAT...ACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS CCA 90 bp TCTCCAATTCATCCCCCAGAGTCTCTGACATGTAGGGAATGGAGATaGTCTACAGTGCCTACAAATGAGACTGATTCTATTATTCTTAAG +
Preference number: 5 (lower is better)
Translates to: SPIHPPESLTCREWR*STVPTNETDSIILK
Trigger: CTTAAGAATAATAGAATCAGTCTCATTTGTAGGCACTGTAGACCATCTCCATTCCCTACATGTCAGAGACTCTGGGGGATGAATTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCGTGAAGATCTGTCCTTaGAAATCTAAAAGAGGATCC +
Preference number: 5 (lower is better)
Translates to: LEKSKVINSGRARAYMECVKICP*KSKRGS
Trigger: GGATCCTCTTTTAGATTTCAAAGGACAGATCTTCAC...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS GCA 90 bp CCACTACATAACACTCTGAACTTCCAAAGAGTTTCAATGACTCACTaGAGCCTCTCTCTACTAGTGAGATGTTATAGTTGGATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: PLHNTLNFQRVSMTH*SLSLLVRCYSWILA
Trigger: TGCTAGAATCCAACTATAACATCTCACTAGTAGAGAGAGGCTGCAGTGAGTCATTGAAACTCTTTGGAAGTTCAGAGTGTTATGTAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
CDS-3UTR CAA 90 bp CTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTCCTCAATTCCATGCTaGTTAGTAAGATCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LEKSKVINSGRARAYMECSSIPC*LVRSLS
Trigger: TGAAAGAGATCTTACTAACAAGCATGGAATTGAGGA...GCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGGTTCACTCTGGCTTaGAATGGTCAAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSWFTLA*NGQNLC
Trigger: ACAGAGATTTTGACCATTCAAAGCCAGAGTGAACCA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTCATCAATTGTACCTaGGCGAACAGCATCACTTAC +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSFINCT*ANSITY
Trigger: GTAAGTGATGCTGTTCGCCAAGGTACAATTGATGAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAAGAGAGCGGCATGCTaGAAAGTCATTTCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSKRAAC*KVISLS
Trigger: TGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCTT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCACTGTGGTCAGCAATTaGTCGAATTATCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSTVVSN*SNYQGS
Trigger: ACTGCCTTGATAATTCGACAAATTGCTGACCACAGT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGCTAGACGTCGTTTTTaGAATTGTGGTAGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSARRRF*NCGSCE
Trigger: CTCACAACTACCACAATTCAAAAAACGACGTCTAGC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS TCA 90 bp TCCTCAGATGGTGAAACTTTAAGCCAGGATTTATCCAACCATTCATaGGGATCTCTCTTTGAGGTCATTAAACTGTGGTCAGCAATTTGT +
Preference number: 5 (lower is better)
Translates to: SSDGETLSQDLSNHS*GSLFEVIKLWSAIC
Trigger: ACAAATTGCTGACCACAGTTTAATGACCTCAAAGAGAGATCCTCATGAATGGTTGGATAAATCCTGGCTTAAAGTTTCACCATCTGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CCA 90 bp TTAATATCTCCAATTCATCCCCCAGAGTCTCTGACATGTAGGGAATaGAGATGGTCTACAGTGCCTACAAATGAGACTGATTCTATTATT +
Preference number: 5 (lower is better)
Translates to: LISPIHPPESLTCRE*RWSTVPTNETDSII
Trigger: AATAATAGAATCAGTCTCATTTGTAGGCACTGTAGACCATCTCCATTCCCTACATGTCAGAGACTCTGGGGGATGAATTGGAGATATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGTGAAGATCTGTCCTTaGAAATCTAAAAGAGGATCC +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSVKICP*KSKRGS
Trigger: GGATCCTCTTTTAGATTTCAAAGGACAGATCTTCAC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp GAAATCCAAAGTCATAAATTCTGGCAGAGCCAGGGCCTATATGGAATGCTAGAAATATCAATTTCTGGTTaGAGGCTTGGAGGTATTAAG +
Preference number: 5 (lower is better)
Translates to: EIQSHKFWQSQGLYGMLEISISG*RLGGIK
Trigger: CTTAATACCTCCAAGCCTCAAACCAGAAATTGATAT...TTCTAGCATTCCATATAGGCCCTGGCTCTGCCAGAATTTATGACTTTGGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CAA 90 bp TTTTCAAGAAAATGGGACCTAGAGAAATCCAAAGTCATAAATTCTGGCAGAGCCTGGTTCACTCTGGCTTaGAATGGTCAAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: FSRKWDLEKSKVINSGRAWFTLA*NGQNLC
Trigger: ACAGAGATTTTGACCATTCAAAGCCAGAGTGAACCA...GGCTCTGCCAGAATTTATGACTTTGGATTTCTCTAGGTCCCATTTTCTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTTTCTCTTTCATCAATaGTACCTTGGCGAACAGCAT +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSFLFHQ*YLGEQH
Trigger: ATGCTGTTCGCCAAGGTACAATTGATGAAAGAGAAA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCAGTGTGTTCATCAATaGTCACCACTACATAACACT +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSQCVHQ*SPLHNT
Trigger: AGTGTTATGTAGTGGTGACAATTGATGAACACACTG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGAAGAAGAACCAATCTaGAATAGGGAAGTGATGCTA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSEEEPI*NREVML
Trigger: TAGCATCACTTCCCTATTCAAGATTGGTTCTTCTTC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCATATGGCATGTAACATaGCTCTTCTCCTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSIWHVT*LFSSFK
Trigger: TTTGAAGGAGGAGAAGAGCAATGTTACATGCCATAT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCCTCCACAAAGAAACTaGCTTTCCATTGGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMPPQRN*LSIGPR
Trigger: TCTTGGACCAATGGAAAGCAAGTTTCTTTGTGGAGG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318737.8
ENST00000374287.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCATATCAATTTCTGGTTaGAGGCTTGGAGGTATTAAG +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSISISG*RLGGIK
Trigger: CTTAATACCTCCAAGCCTCAAACCAGAAATTGATAT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTCCTCAATTCCATGCTaGTTAGTAAGATCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSSIPC*LVRSLS
Trigger: TGAAAGAGATCTTACTAACAAGCATGGAATTGAGGA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTGGTTCACTCTGGCTTaGAATGGTCAAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFWFTLA*NGQNLC
Trigger: ACAGAGATTTTGACCATTCAAAGCCAGAGTGAACCA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAATAGGACTTTCTTCTaGAAGTGTCAAAGAACATGC +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSNRTFF*KCQRTC
Trigger: GCATGTTCTTTGACACTTCAAGAAGAAAGTCCTATT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCAAGAGAGCGGCATGCTaGAAAGTCATTTCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFKRAAC*KVISLS
Trigger: TGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCTT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTGTTGTAGATATCTTTaGCCTTCGACAAATATCCCA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSCCRYL*PSTNIP
Trigger: TGGGATATTTGTCGAAGGCAAAAGATATCTACAACA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCTGACATTGCAATTCTaGTATCTTGTAGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSLTLQF*YLVVGF
Trigger: GAAACCAACTACAAGATACAAGAATTGCAATGTCAG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCAATCAGTACCTTAATTaGCTGTTGACTTTGCATCCA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSNQYLN*LLTLHP
Trigger: TGGATGCAAAGTCAACAGCAAATTAAGGTACTGATT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCGGAATATTCAACTCTTaGCAGTGTTTAGTCCAACAA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSGIFNS*QCLVQQ
Trigger: TTGTTGGACTAAACACTGCAAAGAGTTGAATATTCC...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCTCCATAATGGAAGAGTaGTCATTCAAAATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSSIMEE*SFKMVV
Trigger: AACCACCATTTTGAATGACAACTCTTCCATTATGGA...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCACTTTTTCCAGCTCTTaGGTAGAAATAAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSTFSSS*VEIKAV
Trigger: AACAGCCTTTATTTCTACCAAAGAGCTGGAAAAAGT...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TGGATTAGCATCAAAAACAGTGGAATATGGCATGTAACATTGCTCTTCTCCTCCCCTGTTAATGATTCCTaGTCTCCTGAGTTAAATGAA +
Preference number: 5 (lower is better)
Translates to: WISIKNSGIWHVTLLFSSPVNDS*SPELNE
Trigger: TTCATTTAACTCAGGAGACAAGGAATCATTAACAGG...GGAGGAGAAGAGCAATGTTACATGCCATATTCCACTGTTTTTGATGCTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTGGTTCACTCTGGCTTaGAATGGTCAAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMWFTLA*NGQNLC
Trigger: ACAGAGATTTTGACCATTCAAAGCCAGAGTGAACCA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTCATCAATTGTACCTaGGCGAACAGCATCACTTAC +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMFINCT*ANSITY
Trigger: GTAAGTGATGCTGTTCGCCAAGGTACAATTGATGAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTTCATCAATTGTACCTaGGCGAACAGCATCACTTAC +
Preference number: 5 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSFINCT*ANSITY
Trigger: GTAAGTGATGCTGTTCGCCAAGGTACAATTGATGAA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGAAGAGAGCGGCATGCTaGAAAGTCATTTCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMKRAAC*KVISLS
Trigger: TGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCTT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGACTGTGGTCAGCAATTaGTCGAATTATCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMTVVSN*SNYQGS
Trigger: ACTGCCTTGATAATTCGACAAATTGCTGACCACAGT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCATGAGGATCTCTCTTaGAGGTCATTAAACTGTGGT +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMHEDLS*RSLNCG
Trigger: ACCACAGTTTAATGACCTCAAAGAGAGATCCTCATG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGCTAGACGTCGTTTTTaGAATTGTGGTAGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMARRRF*NCGSCE
Trigger: CTCACAACTACCACAATTCAAAAAACGACGTCTAGC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCGCTAGACGTCGTTTTTaGAATTGTGGTAGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFARRRF*NCGSCE
Trigger: CTCACAACTACCACAATTCAAAAAACGACGTCTAGC...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS TCA 90 bp GCTAATAATATCCAATGCAGTGAAGGTCCTTTATTTAGCATGAGCTaGGCCACCAATGGGTTAATACATGGAAAATCAAGTAAGTACATT +
Preference number: 5 (lower is better)
Translates to: ANNIQCSEGPLFSMS*ATNGLIHGKSSKYI
Trigger: AATGTACTTACTTGATTTTCCATGTATTAACCCATTGGTGGCTCAGCTCATGCTAAATAAAGGACCTTCACTGCATTGGATATTATTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CCA 90 bp GCATCACTTACTACTTTTTCTTGTTCCTTTAAGAGAAACCTTGTTTaGTCAAAAATAACAGTGGCAAATTTCCAATTAGCAGTAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ASLTTFSCSFKRNLV*SKITVANFQLAVGR
Trigger: CCTCCCTACTGCTAATTGGAAATTTGCCACTGTTATTTTTGACCAAACAAGGTTTCTCTTAAAGGAACAAGAAAAAGTAGTAAGTGATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGTGAAGATCTGTCCTTaGAAATCTAAAAGAGGATCC +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMVKICP*KSKRGS
Trigger: GGATCCTCTTTTAGATTTCAAAGGACAGATCTTCAC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCATATCAATTTCTGGTTaGAGGCTTGGAGGTATTAAG +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFISISG*RLGGIK
Trigger: CTTAATACCTCCAAGCCTCAAACCAGAAATTGATAT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTCCTCAATTCCATGCTaGTTAGTAAGATCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFSSIPC*LVRSLS
Trigger: TGAAAGAGATCTTACTAACAAGCATGGAATTGAGGA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTCTGTTTACTGGTTCTaGGTCATTCTTTGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFSVYWF*VILWFF
Trigger: GAAAAACCAAAGAATGACCAAGAACCAGTAAACAGA...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCAATAGGACTTTCTTCTaGAAGTGTCAAAGAACATGC +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFNRTFF*KCQRTC
Trigger: GCATGTTCTTTGACACTTCAAGAAGAAAGTCCTATT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTTTCTCTTTCATCAATaGTACCTTGGCGAACAGCAT +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMFLFHQ*YLGEQH
Trigger: ATGCTGTTCGCCAAGGTACAATTGATGAAAGAGAAA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGAAGAAGAACCAATCTaGAATAGGGAAGTGATGCTA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMEEEPI*NREVML
Trigger: TAGCATCACTTCCCTATTCAAGATTGGTTCTTCTTC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCACTTTTTCCAGCTCTTaGGTAGAAATAAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SEEISVHIFCPFFYQVVFTFSSS*VEIKAV
Trigger: AACAGCCTTTATTTCTACCAAAGAGCTGGAAAAAGT...GAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGATATGGCATGTAACATaGCTCTTCTCCTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMIWHVT*LFSSFK
Trigger: TTTGAAGGAGGAGAAGAGCAATGTTACATGCCATAT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGATATCAATTTCTGGTTaGAGGCTTGGAGGTATTAAG +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMISISG*RLGGIK
Trigger: CTTAATACCTCCAAGCCTCAAACCAGAAATTGATAT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCTGTTTACTGGTTCTaGGTCATTCTTTGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSVYWF*VILWFF
Trigger: GAAAAACCAAAGAATGACCAAGAACCAGTAAACAGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTGTTTACTGGTTCTaGGTCATTCTTTGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSSVYWF*VILWFF
Trigger: GAAAAACCAAAGAATGACCAAGAACCAGTAAACAGA...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCTGACATTGCAATTCTaGTATCTTGTAGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMLTLQF*YLVVGF
Trigger: GAAACCAACTACAAGATACAAGAATTGCAATGTCAG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGGAATATTCAACTCTTaGCAGTGTTTAGTCCAACAA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMGIFNS*QCLVQQ
Trigger: TTGTTGGACTAAACACTGCAAAGAGTTGAATATTCC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGGAAGTTGACACAGAGTaGCTAATAATATCCAATGCA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMEVDTE*LIISNA
Trigger: TGCATTGGATATTATTAGCAACTCTGTGTCAACTTC...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTGAAGTTGACACAGAGTaGCTAATAATATCCAATGCA +
Preference number: 5 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSEVDTE*LIISNA
Trigger: TGCATTGGATATTATTAGCAACTCTGTGTCAACTTC...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGTCCATAATGGAAGAGTaGTCATTCAAAATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMSIMEE*SFKMVV
Trigger: AACCACCATTTTGAATGACAACTCTTCCATTATGGA...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTTCTTTCTCCATAATGGAAGAGTaGTCATTCAAAATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: RKYLFIYFARSSIRLSSFSIMEE*SFKMVV
Trigger: AACCACCATTTTGAATGACAACTCTTCCATTATGGA...GAAAGAAGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGACTTTTTCCAGCTCTTaGGTAGAAATAAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMTFSSS*VEIKAV
Trigger: AACAGCCTTTATTTCTACCAAAGAGCTGGAAAAAGT...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp AATCTAAATAATTGCGCTAGTGGATTAGCATCAAAAACAGTGGAATATGGCATGCCTGTTAATGATTCCTaGTCTCCTGAGTTAAATGAA +
Preference number: 5 (lower is better)
Translates to: NLNNCASGLASKTVEYGMPVNDS*SPELNE
Trigger: TTCATTTAACTCAGGAGACAAGGAATCATTAACAGG...CATGCCATATTCCACTGTTTTTGATGCTAATCCACTAGCGCAATTATTTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
CDS-3UTR CAA 90 bp TTTCTGAGGAAATATCTGTTCATATATTTTGCCCGTTCTTCTATCAGGTTGTCTCCTGTTAATGATTCCTaGTCTCCTGAGTTAAATGAA +
Preference number: 5 (lower is better)
Translates to: FLRKYLFIYFARSSIRLSPVNDS*SPELNE
Trigger: TTCATTTAACTCAGGAGACAAGGAATCATTAACAGG...AGACAACCTGATAGAAGAACGGGCAAAATATATGAACAGATATTTCCTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS TCA 72 bp TGGGGTAAAATTCCCGCCCGCTGGACACGTGACCACTaGGCCTGCACTCTGTGCTTCCATTGGCCAGACCAG +
Preference number: 6 (lower is better)
Translates to: WGKIPARWTRDH*ACTLCFHWPDQ
Trigger: CTGGTCTGGCCAATGGAAGCACAGAGTGCAGGCTCAGTGGTCACGTGTCCAGCGGGCGGGAATTTTACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS CCA 72 bp ACATCTGAGGTAAAAATCGCCTCCTGCATCTCTTCCTaGGGTAAAATTCCCGCCCGCTGGACACGTGACCAC +
Preference number: 6 (lower is better)
Translates to: TSEVKIASCISS*GKIPARWTRDH
Trigger: GTGGTCACGTGTCCAGCGGGCGGGAATTTTACCCCAGGAAGAGATGCAGGAGGCGATTTTTACCTCAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374283.5
CDS GCA 72 bp CTGCCCAGGGCAAATGAAGTCTTCATATGCCACACTTaGACAGCAGCTGAAGAACCCCAGAAAGCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: LPRANEVFICHT*TAAEEPQKAVH
Trigger: GTGGACTGCTTTCTGGGGTTCTTCAGCTGCTGTGCAAGTGTGGCATATGAAGACTTCATTTGCCCTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682672.1
CDS GCA 72 bp TCAGGAAAGCTGCCCAGGGCAAATGAAGTCTTCATATaGCACACTTGCACAGCAGCTGAAGAACCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: SGKLPRANEVFI*HTCTAAEEPQK
Trigger: TTTCTGGGGTTCTTCAGCTGCTGTGCAAGTGTGGCATATGAAGACTTCATTTGCCCTGGGCAGCTTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682672.1
CDS GCA 72 bp TTCATTGTGAACTGGTCCCGTAAGGCTCAGGAAAGCTaGCCAGGGCAAATGAAGTCTTCATATGCCACACTT +
Preference number: 6 (lower is better)
Translates to: FIVNWSRKAQES*PGQMKSSYATL
Trigger: AAGTGTGGCATATGAAGACTTCATTTGCCCTGGGCAGCTTTCCTGAGCCTTACGGGACCAGTTCACAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682672.1
CDS CCA 72 bp CCAATTCATCCCCCAGAGTCTCTGACATGTAGGGAATaGAGATGGTCTACAGTGCCTACAAATGAGACTGAT +
Preference number: 6 (lower is better)
Translates to: PIHPPESLTCRE*RWSTVPTNETD
Trigger: ATCAGTCTCATTTGTAGGCACTGTAGACCATCTCCATTCCCTACATGTCAGAGACTCTGGGGGATGAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS CCA 72 bp CATCCCCCAGAGTCTCTGACATGTAGGGAATGGAGATaGTCTACAGTGCCTACAAATGAGACTGATTCTATT +
Preference number: 6 (lower is better)
Translates to: HPPESLTCREWR*STVPTNETDSI
Trigger: AATAGAATCAGTCTCATTTGTAGGCACTGTAGACCATCTCCATTCCCTACATGTCAGAGACTCTGGGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394777.8
ENST00000394779.7
CDS TCA 72 bp CCGGAACTGAAACAGCTGAGATATCCTCACATAACTTaGGCTTTTAACAGGAGCCCAACACATTGGACTACT +
Preference number: 6 (lower is better)
Translates to: PELKQLRYPHIT*AFNRSPTHWTT
Trigger: AGTAGTCCAATGTGTTGGGCTCCTGTTAAAAGCTCAAGTTATGTGAGGATATCTCAGCTGTTTCAGTTCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683745.1
CDS CAA 72 bp CCAAATAGGGGCCTAAAATGCTGTTGTAGATATCTTTaGCCTTCGACAAATATCCCAATGCTGTGTCCAAGC +
Preference number: 6 (lower is better)
Translates to: PNRGLKCCCRYL*PSTNIPMLCPS
Trigger: GCTTGGACACAGCATTGGGATATTTGTCGAAGGCAAAAGATATCTACAACAGCATTTTAGGCCCCTATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 72 bp CCAAATAGGGGCCTAAAATGCTGTTGTAGATATCTTTaGCCTTCGACAAATATCCTTGGCGAACAGCATCAC +
Preference number: 6 (lower is better)
Translates to: PNRGLKCCCRYL*PSTNILGEQHH
Trigger: GTGATGCTGTTCGCCAAGGATATTTGTCGAAGGCAAAAGATATCTACAACAGCATTTTAGGCCCCTATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394777.8
CDS CAA 72 bp GCCAGGATTTATCCAACCATTCATGAGGATCTCTCTTaGAGGTCATTAAACTGTGGTCAGCAATTTGTCGAA +
Preference number: 6 (lower is better)
Translates to: ARIYPTIHEDLS*RSLNCGQQFVE
Trigger: TTCGACAAATTGCTGACCACAGTTTAATGACCTCAAAGAGAGATCCTCATGAATGGTTGGATAAATCCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 72 bp GGACTTCAGGTAGGAGTTCCTGAAGTTGACACAGAGTaGCTAATAATATCCAATGCAGTGAAGGTCCTTTAT +
Preference number: 6 (lower is better)
Translates to: GLQVGVPEVDTE*LIISNAVKVLY
Trigger: ATAAAGGACCTTCACTGCATTGGATATTATTAGCAACTCTGTGTCAACTTCAGGAACTCCTACCTGAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 90 bp AGGACATCTCTAATTGTTACCAGAAGATGTAAGAGAGCGGCATGCTaGAAAGTCATTTCTCTTTCATCAATTGTACCTTGGCGAACAGCA +
Preference number: 6 (lower is better)
Translates to: RTSLIVTRRCKRAAC*KVISLSSIVPWRTA
Trigger: TGCTGTTCGCCAAGGTACAATTGATGAAAGAGAAATGACTTTCAAGCATGCCGCTCTCTTACATCTTCTGGTAACAATTAGAGATGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 90 bp ATGCTTGTTAGTAAGATTTCTCAAGGAAATCCTCCACAAAGAAACTaGCTTTCCATTGGTCCAAGACTGAGGTATCTGTCATTCCCGGAA +
Preference number: 6 (lower is better)
Translates to: MLVSKISQGNPPQRN*LSIGPRLRYLSFPE
Trigger: TTCCGGGAATGACAGATACCTCAGTCTTGGACCAATGGAAAGCAAGTTTCTTTGTGGAGGATTTCCTTGAGAAATCTTACTAACAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682571.1
CDS TCA 72 bp GGTGAAACTTTAAGCCAGGATTTATCCAACCATTCATaGGGATCTCTCTTTGAGGTCATTAAACTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: GETLSQDLSNHS*GSLFEVIKLWS
Trigger: TGACCACAGTTTAATGACCTCAAAGAGAGATCCTCATGAATGGTTGGATAAATCCTGGCTTAAAGTTTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS TCA 72 bp ATCCAATGCAGTGAAGGTCCTTTATTTAGCATGAGCTaGGCCACCAATGGGTTAATACATGGAAAATCAAGT +
Preference number: 6 (lower is better)
Translates to: IQCSEGPLFSMS*ATNGLIHGKSS
Trigger: ACTTGATTTTCCATGTATTAACCCATTGGTGGCTCAGCTCATGCTAAATAAAGGACCTTCACTGCATTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS TCA 72 bp TTCAAATCTGTAACTGAATATTGGCTGTGGGGCTCTTaGATTCTTGGCACTGTAAGCAAAAATGGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: FKSVTEYWLWGS*ILGTVSKNGFK
Trigger: TTTGAACCCATTTTTGCTTACAGTGCCAAGAATTCAAGAGCCCCACAGCCAATATTCAGTTACAGATTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318737.8
ENST00000374283.5
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682571.1
ENST00000682961.1
ENST00000683944.1
CDS TCA 72 bp GAGAAATTACTCCAGGGGAAATCTGCTCCAATATATTaGTTATGTACAACTACACAGGAACTTGTACCCCTT +
Preference number: 6 (lower is better)
Translates to: EKLLQGKSAPIY*LCTTTQELVPL
Trigger: AAGGGGTACAAGTTCCTGTGTAGTTGTACATAATCAATATATTGGAGCAGATTTCCCCTGGAGTAATTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS TCA 72 bp GCAGTCTGCTGTGCACCATATTGTAAGTTGAACGGGTaGTTCTCTTGTTCCCATATATTTTTCTTAAAGTTC +
Preference number: 6 (lower is better)
Translates to: AVCCAPYCKLNG*FSCSHIFFLKF
Trigger: GAACTTTAAGAAAAATATATGGGAACAAGAGAATCACCCGTTCAACTTACAATATGGTGCACAGCAGACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS TCA 72 bp TGTTACATGCAGTCTGCTGTGCACCATATTGTAAGTTaGACGGGTGATTCTCTTGTTCCCATATATTTTTCT +
Preference number: 6 (lower is better)
Translates to: CYMQSAVHHIVS*TGDSLVPIYFS
Trigger: AGAAAAATATATGGGAACAAGAGAATCACCCGTTCAACTTACAATATGGTGCACAGCAGACTGCATGTAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS GCA 72 bp GAGCTGAATTTTATATCCCCGATATCCTCAATTCCATaGTTGTTAGTAAGATTTCTCAAGGAAATCCTCCAC +
Preference number: 6 (lower is better)
Translates to: ELNFISPISSIP*LLVRFLKEILH
Trigger: GTGGAGGATTTCCTTGAGAAATCTTACTAACAAGCATGGAATTGAGGATATCGGGGATATAAAATTCAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682571.1
CDS CAA 72 bp TCCATAATGGAAGAGTTGTCATTCAAAATGGTGGTTTaGTCTTCCTGCACTGTCTCTCCTAATCCTAAATAC +
Preference number: 6 (lower is better)
Translates to: SIMEELSFKMVV*SSCTVSPNPKY
Trigger: GTATTTAGGATTAGGAGAGACAGTGCAGGAAGACAAAACCACCATTTTGAATGACAACTCTTCCATTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CCA 72 bp AATGATTCCTTGTCTCCTGAGTTAAATGAAGATTCATaGTGCCTTTTCTGTCCTAAACTTTTTCCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: NDSLSPELNEDS*CLFCPKLFPAL
Trigger: AAGAGCTGGAAAAAGTTTAGGACAGAAAAGGCACCATGAATCTTCATTTAACTCAGGAGACAAGGAATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 90 bp TCAATTCTTCTAGATCCTGCAAAATTATGGCAGTGTGTTCATCAATaGTCACCACTACATAACACTCTGAACTTCCAAAGAGTTTCAATG +
Preference number: 6 (lower is better)
Translates to: SILLDPAKLWQCVHQ*SPLHNTLNFQRVSM
Trigger: CATTGAAACTCTTTGGAAGTTCAGAGTGTTATGTAGTGGTGACAATTGATGAACACACTGCCATAATTTTGCAGGATCTAGAAGAATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
CDS GCA 72 bp CTCCTTGATTCTATATTAATTAGAAAAGGAGTATTCTaGCCTATATTAGATTTACAGCTGGAGTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: LLDSILIRKGVF*PILDLQLESFQ
Trigger: CTGGAAAGACTCCAGCTGTAAATCTAATATAGGGCAGAATACTCCTTTTCTAATTAATATAGAATCAAGGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 72 bp TTCAGTTCTGAGAGTGATGGAATATCAATTTCTGGTTaGAGGCTTGGAGGTATTAAGAATTCATACTCAATA +
Preference number: 6 (lower is better)
Translates to: FSSESDGISISG*RLGGIKNSYSI
Trigger: TATTGAGTATGAATTCTTAATACCTCCAAGCCTCAAACCAGAAATTGATATTCCATCACTCTCAGAACTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318737.8
ENST00000374283.5
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1
CDS CAA 72 bp ATTTGCGGTGATTTTGTTATGGAAGAAGAACCAATCTaGAATAGGGAAGTGATGCTACAAAAATGCTTTAAC +
Preference number: 6 (lower is better)
Translates to: ICGDFVMEEEPI*NREVMLQKCFN
Trigger: GTTAAAGCATTTTTGTAGCATCACTTCCCTATTCAAGATTGGTTCTTCTTCCATAACAAAATCACCGCAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318737.8
ENST00000374287.7
ENST00000394777.8
ENST00000394779.7
ENST00000682961.1
ENST00000683944.1