RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHMT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000182199

Ensembl transcript IDs: ENST00000328923.8, ENST00000414700.7, ENST00000449049.7, ENST00000553324.5, ENST00000553474.5, ENST00000553529.5, ENST00000553837.5, ENST00000553868.1, ENST00000553949.1, ENST00000553950.5, ENST00000554310.5, ENST00000554467.5, ENST00000554600.5, ENST00000554604.5, ENST00000554656.5, ENST00000554975.5, ENST00000555116.5, ENST00000555213.1, ENST00000555563.5, ENST00000555634.5, ENST00000555773.5, ENST00000555774.5, ENST00000556689.5, ENST00000556737.1, ENST00000556798.1, ENST00000556825.5, ENST00000557269.5, ENST00000557302.1, ENST00000557348.5, ENST00000557427.5, ENST00000557433.5, ENST00000557487.5, ENST00000557529.1, ENST00000557703.5, ENST00000557740.5

Found 1269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTG +
Preference number: 1 (lower is better)
Translates to: IQALAPAQPELHPGP*AAGPPAPGGCQYHL
Trigger: CAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 90 bp TGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCC +
Preference number: 1 (lower is better)
Translates to: CRRPGWLGTRSRAGH*LPTVQDPGQRLPRP
Trigger: GGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR CCA 90 bp CACCTGATACCAGTGAGTAGCCTCGCTCTAGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACA +
Preference number: 1 (lower is better)
Translates to: HLIPVSSLALAGHLP*PEHSSEPAGSTPGT
Trigger: TGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGCTAGAGCGAGGCTACTCACTGGTATCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR CCA 90 bp GTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAAT +
Preference number: 1 (lower is better)
Translates to: VNEASIGAGASYDEP*PEKSSSQCQLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 90 bp GTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGACAGACACACAAACAGCTAAAGCCG +
Preference number: 1 (lower is better)
Translates to: VAGKVEQSVPAGCSQ*GQFWAGQTHKQLKP
Trigger: CGGCTTTAGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
3UTR TCA 90 bp GCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTAAGCAGGAAGGATTTGAAATCCTGG +
Preference number: 1 (lower is better)
Translates to: ALANCSTRCLRLARR*LVSESLSRKDLKSW
Trigger: CCAGGATTTCAAATCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR TCA 90 bp TCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: SEGHSSTSPRKRTRL*HCDHDRGSNRKCLG
Trigger: GCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp GAGGAGGCTGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: EEAAAPGVLVVAVVGAERAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...CCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCAGCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp AGAGGAGGCTGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: RGGCSPGGPCGSGGGSGALHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...CGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCAGCCTCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCATGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: APAQPELHPGPWAAGPPACGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp GAGGAGGCTGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: EEAAAPGVLVVAVVGAERSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCAGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp GTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: VKAGAPSRRPPGVMALRSPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...AGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp TGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACAAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: CSPGGPCGSGGGSGAVYTKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...TGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp TCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SRNCREVKAGAPSRRPPGPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...ACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCAAGACAAATCACTGTTTaGCCCAGGGGAACCCCACCC +
Preference number: 2 (lower is better)
Translates to: APAQPELHPGPWAAGPPARQITV*PRGTPP
Trigger: GGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: QALAPAQPELHPGPWAAGTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: QALAPAQPELHPGPWAAGACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp TGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: WIQALAPAQPELHPGPWAAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...GGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp ATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: IQALGPQVHQHQVVVSTTCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp AAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTCCAGTCTGGTGTCGGCTCTaGTCAGAGACAGAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: KAGAPSRRPPGVMALRSPVWCRL*SETERG
Trigger: TCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGAC...TGGAGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp GGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GMGKALANCSTRCLRLARLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...TCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGGGCAGTGAGATCAGCTaGGGGAGGGAGCAGACAGTG +
Preference number: 2 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQGSEIS*GREQTV
Trigger: CACTGTCTGCTCCCTCCCCCAGCTGATCTCACTGCC...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557529.1
3UTR CAA 90 bp GTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTGATGTGGGCCATGTCTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: VVVTMSACLKGEGIT*AATRPLMWAMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LLLALKGTPQLPQERGRVDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp GCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: AVYTLRETNHCLAQGNPTDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp GCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: ARCDGTSVSRTGVLVGSDDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...ATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 2 (lower is better)
Translates to: QALAPAQPELHPGPWAAGSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp ATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 2 (lower is better)
Translates to: IQALAPAQPELHPGPWAAVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...TGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAGGAGCAGACAGTGAGTaGGAACTGGCTGGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: PCLLLALKGTPQLPQERGGADSE*ELAGPG
Trigger: CCCCGGGCCAGCCAGTTCCCACTCACTGTCTGCTCC...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557529.1
3UTR-3UTR TCA 90 bp CGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: RAFFRTCREYSRNMGVQAACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp ATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: IQALAPAQPELHPGPWAAAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...TGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555116.5
ENST00000555774.5
3UTR-3UTR TCA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCATGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: VVVVTMSACLKGEGITLACGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp CCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 2 (lower is better)
Translates to: PHGTVEKLRLGPQAAGRPKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...CGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 2 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: CFDFITHLSHAGVVNEASDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CCA 90 bp GGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACATTGAGGGAGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 2 (lower is better)
Translates to: GGPCGSGGGSGAVYTLRESYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CTCCCTCAATGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: LALKGTPQLPQERGRVSDGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp CTGATACCAGTGAGTAGCCTCGCTCTAGCAGGGCATCTGCCATGGCCCGAGCATGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: LIPVSSLALAGHLPWPEHACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...ATGCTCGGGCCATGGCAGATGCCCTGCTAGAGCGAGGCTACTCACTGGTATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp GGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: GDDVRVLERRGNHLGSHQSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp AGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SSGGDDVRVLERRGNHLGPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RCLQCSSKPGMGKALANCCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 2 (lower is better)
Translates to: MGKALANCSTRCLRLARRRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGGAGGGAGCAGACAGTaGGTGGGAACTGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: FWEGRLYLALALSERSSLGGSRQ*VGTGWP
Trigger: GGGCCAGCCAGTTCCCACTCACTGTCTGCTCCCTCC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557529.1
3UTR-3UTR GCA 90 bp GCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: ASIGAGASYDEPWPEKSSIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...GCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR GCA 90 bp ACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCAGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: TMSACLKGEGITLAATRPDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...TGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 2 (lower is better)
Translates to: MGKALANCSTRCLRLARRGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 2 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR CAA 90 bp GGTGGGAGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACCCACAGTAATGGAAACTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GGSGAVYTLRETNHC*AQGNPTHSNGNSGQ
Trigger: CTGCCCTGAGTTTCCATTACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LQCSSKPGMGKALANCSTPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp GCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: AMSASRCALTSSHTSLMRPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...CCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp GGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 2 (lower is better)
Translates to: GGDDVRVLERRGNHLGSHWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...GTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 2 (lower is better)
Translates to: LALKGTPQLPQERGRVSDRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 2 (lower is better)
Translates to: MGKALANCSTRCLRLARRKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp CCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCAAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 2 (lower is better)
Translates to: PSRPLGRRSTSTRWLSVPKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...TGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp GACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 2 (lower is better)
Translates to: DDVRVLERRGNHLGSHQAVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: FWEGRLYLALALSERSSLCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 2 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp AGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: SGAVYTLRETNHCLAQGNACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp GTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: VPSMLIKTRHGEGPGKLLACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp CACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: HGKVDSVLKCVRDLPASLCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...AAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: FWEGRLYLALALSERSSLVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGAAAGAGGAGGCTaGAGCCCCGGGGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMTERGG*SPGGPC
Trigger: ACAAGGACCCCCGGGGCTGCAGCCTCCTCTTTCTGT...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 2 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp TTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 2 (lower is better)
Translates to: LAVMDTSSSTRSARAPSRSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...CCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: SDTVIMTGVQTESAWALLGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp TGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGGATACGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: CDGTSVSRTGVLVGSDGYGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...GTATCCATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 2 (lower is better)
Translates to: LLLALKGTPQLPQERGRVKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 2 (lower is better)
Translates to: PCLLLALKGTPQLPQERGKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp AGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: SGAVYTLRETNHCLAQGNSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...GTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAACCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 2 (lower is better)
Translates to: GAVYTLRETNHCLAQGNPPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: VVVVTMSACLKGEGITLAIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR GCA 90 bp CGGTGGTGGGAGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: RWWERSGVHIEGDKSLFGIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...GCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCTCCCACCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp GTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: VGHVCQQVCFDFITHLSHSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...ATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp GTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: VPSMLIKTRHGEGPGKLLAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...GAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555116.5
ENST00000555774.5
3UTR-3UTR TCA 90 bp GTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 2 (lower is better)
Translates to: VPSMLIKTRHGEGPGKLLPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 2 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 2 (lower is better)
Translates to: LALKGTPQLPQERGRVSDRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 2 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp AATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGAAAAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: NLLRLLITSGVGSDQRQKKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...TTTCTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: TVIMTGVQTESAWALLLSKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
3UTR-3UTR CCA 90 bp GTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 2 (lower is better)
Translates to: VYTLRETNHCLAQGNPTHSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...GTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp GTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 2 (lower is better)
Translates to: VPSMLIKTRHGEGPGKLLSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...GAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGGTCTGGTGTCGGCTCTaGTCAGAGACAGAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMVWCRL*SETERG
Trigger: TCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGAC...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp CACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: HGKVDSVLKCVRDLPASLSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...AAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 2 (lower is better)
Translates to: TVIMTGVQTESAWALLLSRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: LLALKGTPQLPQERGRVSGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp GTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 2 (lower is better)
Translates to: VPSMLIKTRHGEGPGKLLVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp TTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGAGACAAATCACTGTTTaGCCCAGGGGAACCCCACCC +
Preference number: 2 (lower is better)
Translates to: LNLLRLLITSGVGSDQRQRQITV*PRGTPP
Trigger: GGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT...CTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTAGACAAATCACTGTTTaGCCCAGGGGAACCCCACCC +
Preference number: 2 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASRQITV*PRGTPP
Trigger: GGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 2 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTRPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555116.5
ENST00000555774.5
3UTR-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 2 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: KKRSSQLQILGRETIPGSAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCACAGAAAGAGGAGGCTaGAGCCCCGGGGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPTERGG*SPGGPC
Trigger: ACAAGGACCCCCGGGGCTGCAGCCTCCTCTTTCTGT...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp AGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTAATGGAAACTCAGATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: RQITVWPRGTPPTVMETQIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...CTGAGTTTCCATTACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR GCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 2 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 2 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR TCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 2 (lower is better)
Translates to: TVIMTGVQTESAWALLLSEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 2 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: RLYLALALSERSSLPHQKVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp AGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: SSGGDDVRVLERRGNHLGLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...GCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp TGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGGATACGAGCGGTGTACACATTaGGGGAGACAAATCACTGTT +
Preference number: 2 (lower is better)
Translates to: CDGTSVSRTGVLVGSDGYERCTH*GRQITV
Trigger: AACAGTGATTTGTCTCCCTCAATGTGTACACCGCTC...GTATCCATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: KKRSSQLQILGRETIPGSAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 2 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp TCTAAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCAGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 2 (lower is better)
Translates to: SKPMLTPSSIKSTTLRKSVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...TGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: LQCSSKPGMGKALANCSTLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: KKRSSQLQILGRETIPGSGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: YKFWEGRLYLALALSERSGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp TCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: SFNKLNLLRLLITSGVGSDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...AGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR CAA 90 bp AAATCCTGGAGCTTGGCAGTCTTGCTCTTCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCC +
Preference number: 2 (lower is better)
Translates to: KSWSLAVLLFTSKPM*TPSSIKSTTLRKSS
Trigger: GGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR GCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 2 (lower is better)
Translates to: TVIMTGVQTESAWALLLSASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: LLSYKFWEGRLYLALALSVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp AGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTAATGGAAACTCAGCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: RQITVWPRGTPPTVMETQLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...CTGAGTTTCCATTACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACACTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: KKRSSQLQILGRETIPGSDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR CCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 2 (lower is better)
Translates to: TVIMTGVQTESAWALLLSLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: KKRSSQLQILGRETIPGSGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR GCA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: TISFNKLNLLRLLITSGVGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR TCA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGAGCGGTGTACACATTaGGGGAGACAAATCACTGTT +
Preference number: 2 (lower is better)
Translates to: TISFNKLNLLRLLITSGVERCTH*GRQITV
Trigger: AACAGTGATTTGTCTCCCTCAATGTGTACACCGCTC...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CAA 90 bp CCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: PGMGKALANCSTRCLRLAGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...GGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 72 bp TTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAGGACAGGTGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: LRLGPQAAGRPV*WHFGLQDRCSC
Trigger: ACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 3 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CAA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp CCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCAACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 3 (lower is better)
Translates to: PSRPLGRRSTSTRWLSVPTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...TGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp TGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 3 (lower is better)
Translates to: WIQALAPAQPELHPGPWATMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 72 bp GGAGGGTGCCTACCCACCCCTGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: GGCLPTPACYWL*RALLNFPKKED
Trigger: GTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR TCA 72 bp CCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGATCCAGGTCAAAGGCTT +
Preference number: 3 (lower is better)
Translates to: PGWLGTRSRAGH*LPTVQDPGQRL
Trigger: AAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR CCA 72 bp GCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: ASIGAGASYDEP*PEKSSSQCQLV
Trigger: AACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 3 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 3 (lower is better)
Translates to: GAVYTLRETNHCLAQGNPISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...GGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR TCA 72 bp GTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACATTaGGGGAGACAAATCACTGTTTGGCCCAGGGGAACC +
Preference number: 3 (lower is better)
Translates to: VVAVVGAERCTH*GRQITVWPRGT
Trigger: GGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCTCCCACCACCGCTACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CAA 90 bp TTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 3 (lower is better)
Translates to: LAVMDTSSSTRSARAPSRDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...CCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CAA 90 bp GGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 3 (lower is better)
Translates to: GDDVRVLERRGNHLGSHQASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...CTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR GCA 72 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACACCTCTCTCATGCGGGC +
Preference number: 3 (lower is better)
Translates to: QATDVGHVCQQV*FDFITHLSHAG
Trigger: GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
3UTR GCA 72 bp CTTGGCAGCCACCAGGCCACTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGACTTCATCACACACCTC +
Preference number: 3 (lower is better)
Translates to: LGSHQATDVGHV*QQVCFDFITHL
Trigger: GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
3UTR CCA 72 bp CCAGTGAGTAGCCTCGCTCTAGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACT +
Preference number: 3 (lower is better)
Translates to: PVSSLALAGHLP*PEHSSEPAGST
Trigger: AGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGCTAGAGCGAGGCTACTCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR CCA 72 bp TTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCC +
Preference number: 3 (lower is better)
Translates to: FPGAFNAHQNQA*GRPWQTAPPVA
Trigger: GGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CAA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSAGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 3 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR CCA 72 bp GGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCCCTTTCCGGTAGAAGA +
Preference number: 3 (lower is better)
Translates to: GPQMCKGSPGQS*GPQPSPLSGRR
Trigger: TCTTCTACCGGAAAGGGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp AGTCTTGTGAGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACC +
Preference number: 3 (lower is better)
Translates to: SLVSSGGDDVRVLERRGNETNHC*AQGNPT
Trigger: GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTC...ATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CAA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 3 (lower is better)
Translates to: LALKGTPQLPQERGRVSDASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp TCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 3 (lower is better)
Translates to: SSKPGMGKALANCSTRCLGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...CAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 72 bp AAGATGAGCCCTGACCTGGCCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAA +
Preference number: 3 (lower is better)
Translates to: KMSPDLAPRRVL*VVVVTMSACLK
Trigger: TTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACTCTTCGAGGGGCCAGGTCAGGGCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 3 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: PCLLLALKGTPQLPQERGGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CAA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 3 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 72 bp AACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTAAGCAGGAAGGATTTG +
Preference number: 3 (lower is better)
Translates to: NCSTRCLRLARR*LVSESLSRKDL
Trigger: CAAATCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CAA 90 bp AGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: SGAVYTLRETNHCLAQGNGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...GTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CAA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACC +
Preference number: 3 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPETNHC*AQGNPT
Trigger: GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
3UTR-3UTR CAA 90 bp AGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTAATGGAAACTCAGTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 3 (lower is better)
Translates to: RQITVWPRGTPPTVMETQSMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...CTGAGTTTCCATTACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555774.5
3UTR TCA 72 bp AAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGACAGACACACAAACAG +
Preference number: 3 (lower is better)
Translates to: KVEQSVPAGCSQ*GQFWAGQTHKQ
Trigger: CTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
3UTR-3UTR CAA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 3 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR-3UTR CAA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 3 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR TCA 72 bp CACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGGGGTTCAAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: HSSTSPRKRTRL*HCDHDRGSNRK
Trigger: CTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR GCA 72 bp AGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAACCAGGCATGGGGAAG +
Preference number: 3 (lower is better)
Translates to: RVTLSLWASFPR*LQCSSKPGMGK
Trigger: CTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
3UTR-3UTR CAA 90 bp AAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 3 (lower is better)
Translates to: KPMLTPSSIKSTTLRKSSASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 3 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
3UTR-3UTR CAA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CAA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR-3UTR CAA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTTTTAACAAATTGAATTaGCTGCGCCTGCTAATCACG +
Preference number: 3 (lower is better)
Translates to: TVIMTGVQTESAWALLLSFNKLN*LRLLIT
Trigger: CGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAA...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCAGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: APAQPELHPGPWAAGPPAAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QALAPAQPELHPGPWAAGAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGAGGAGGCTGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGAGCTGCCCACATCTCTaGAGAGGCCGAGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: RGGCSPGGPCGSGGGSGASCPHL*RGRAAQ
Trigger: TTGGGCGGCTCGGCCTCTGCAGAGATGTGGGCAGCT...CGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCAGCCTCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328923.8
ENST00000556825.5
CDS-3UTR CCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QALAPAQPELHPGPWAAGDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: APAQPELHPGPWAAGPPAPEWPS*PAAHIS
Trigger: AGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGG...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGAGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AEGLCRRPGWLGTRSRAGAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...TCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR CCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCATCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: APAQPELHPGPWAAGPPASKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACACCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CSPGGPCGSGGGSGAVYTPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...TGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp TGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACACTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSPGGPCGSGGGSGAVYTLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...TGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp GGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTGACGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: GCVDGQVGWGPGVGLDIDAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...GTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR GCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QALAPAQPELHPGPWAAGKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VKAGAPSRRPPGVMALRSVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...AGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTCCATCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: KAGAPSRRPPGVMALRSPSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...TGGAGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CGTGAGGTTGCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: REVAEGLCRRPGWLGTRSAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...ACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGCAACCTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: MGKALANCSTRCLRLARRCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PGMGKALANCSTRCLRLAGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...GGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: PGMGKALANCSTRCLRLAESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...GGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: EEAAAPGVLVVAVVGAERGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...CCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCAGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGAAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AEGLCRRPGWLGTRSRAGKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...TCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATCCTTCCAGCCCTCACTaGCGCCGGGACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSHAGVVNEASIGAGASYPSSPH*RRDPCL
Trigger: CAGGCAGGGGTCCCGGCGGCAGTGAGGGCTGGAAGG...ATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557348.5
CDS-3UTR CCA 90 bp GGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GASYDEPWPEKSSSQCQLDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...CAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CGTGAGGTTGCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: REVAEGLCRRPGWLGTRSCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...ACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGCAACCTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR CCA 90 bp GCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGAACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AEGLCRRPGWLGTRSRAGTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...TCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
3UTR CAA 72 bp ATCGGGCAGGTCCAGCCCCATGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IGQVQPHDPVVR*QKGCVDGQVGW
Trigger: CCAGCCAACCTGGCCGTCTACACAGCCCTTCTGCAACCTCACGACCGGATCATGGGGCTGGACCTGCCCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp AAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTCCATGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: KAGAPSRRPPGVMALRSPWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...TGGAGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVVNEASIGAGASYDEPCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...CGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGGACATTGACTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WTLTPHCAGSRSKASKARAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...CCGGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAATGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp GGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: GASYDEPWPEKSSSQCQLAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...CAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGAAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GMGKALANCSTRCLRLARNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...TCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSACRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTGACGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: GCVDGQVGWGPGVGLDIDAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...GTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp CCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: PGMGKALANCSTRCLRLASSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...GGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GDDVRVLERRGNHLGSHQAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...CTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: PHGTVEKLRLGPQAAGRPEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...CGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GASYDEPWPEKSSSQCQLCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...CAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: PHGTVEKLRLGPQAAGRPKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...CGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: QALAPAQPELHPGPWAAGKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: MGKALANCSTRCLRLARRACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: DDVRVLERRGNHLGSHQASLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...GGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSASRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACAATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: CSPGGPCGSGGGSGAVYTIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...TGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGAGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: AEGLCRRPGWLGTRSRAGVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...TCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR GCA 90 bp GCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGVVNEASIGAGASYDEPKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...CGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HLSHAGVVNEASIGAGASTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...GCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: IQALGPQVHQHQVVVSTTSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...GGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTGACAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GCVDGQVGWGPGVGLDIDSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...GTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp AGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SIGAGASYDEPWPEKSSSAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGCCATGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: CHGPSILQNLQGVLPEHGAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...CCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSAVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RAFFRTCREYSRNMGVQALSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...GGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VVNEASIGAGASYDEPWPLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...CGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAAGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQVPSMLIKTRHGEGPGKAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...TTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CGTGAGGTTGCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTGTATCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: REVAEGLCRRPGWLGTRSVSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGATAC...ACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGCAACCTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGGAGGGAGCAGACAGTaGGTGGGAACTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQGGSRQ*VGTGWP
Trigger: GGGCCAGCCAGTTCCCACTCACTGTCTGCTCCCTCC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR GCA 90 bp ATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCACTGGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: MSACLKGEGITLAATRPLESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RAFFRTCREYSRNMGVQASLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...GGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACATTGAGGGAGGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: GGPCGSGGGSGAVYTLREDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...CTCCCTCAATGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RAFFRTCREYSRNMGVQAKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...GGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGTGCCGCCGGGACCCCTaGCTGATGCAAGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLCRRDP*LMQAVK
Trigger: CTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCA...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557348.5
CDS-3UTR GCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACTCCATGAACCACTCTaGAAAGCTTGTCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: APAQPELHPGPWAAGPPALHEPL*KACPPK
Trigger: TTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAG...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSASKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp ATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: MSASRCALTSSHTSLMRADGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...CGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDECRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSHAGVVNEASIGAGASYCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...ATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCAAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: APAQPELHPGPWAAGPPAKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: VVNEASIGAGASYDEPWPAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...CGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QALAPAQPELHPGPWAAGVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACATTGAGGGAGAGACAAATCACTGTTTaGCCCAGGGGAACCCCACCC +
Preference number: 4 (lower is better)
Translates to: GGPCGSGGGSGAVYTLRERQITV*PRGTPP
Trigger: GGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT...CTCCCTCAATGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LLLALKGTPQLPQERGRVAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVYTLRETNHCLAQGNPTCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGATGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGGGGTCCACAGCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: DSVLKCVRDLPASLGVHSCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GCTGTGGACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSGGDDVRVLERRGNHLGCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CGTGAGGTTGCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: REVAEGLCRRPGWLGTRSPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...ACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGCAACCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp GTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: VVNEASIGAGASYDEPWPRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...CGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTGACTTGTTTCCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGKLLHPLPEVGQTLTCFLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...GAAACAAGTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: NAHQNQAWGRPWQTAPPVAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CATTTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: HFPGAFNAHQNQAWGRPWAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...CCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: IQALAPAQPELHPGPWAAKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...TGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCAGCTGCCCACATCTCTaGAGAGGCCGAGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLSCPHL*RGRAAQ
Trigger: TTGGGCGGCTCGGCCTCTGCAGAGATGTGGGCAGCT...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328923.8
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACAGCTGCCCACATCTCTaGAGAGGCCGAGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHSCPHL*RGRAAQ
Trigger: TTGGGCGGCTCGGCCTCTGCAGAGATGTGGGCAGCT...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328923.8
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TGCCATGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: CHGPSILQNLQGVLPEHGAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...CCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: SIGAGASYDEPWPEKSSSESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTGACCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: GCVDGQVGWGPGVGLDIDLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...GTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR GCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGCAGCCCCGGGGGTCCTTGTGGTAGCGGTGGTGGGAGCGGAGCGGTGTACACAAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: CSPGGPCGSGGGSGAVYTKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...TGTGTACACCGCTCCGCTCCCACCACCGCTACCACAAGGACCCCCGGGGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: VKAGAPSRRPPGVMALRSKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...AGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGAGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: AEGLCRRPGWLGTRSRAGVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...TCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR GCA 90 bp TCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: SRNCREVKAGAPSRRPPGVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...ACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATAGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: GPWAAGPPAPGGCQYHLIVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...TATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGCCATGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: CHGPSILQNLQGVLPEHGKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...CCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGACAGAAAGAGGAGGCTaGAGCCCCGGGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LAVMDTSSSTRSARAPSRTERGG*SPGGPC
Trigger: ACAAGGACCCCCGGGGCTGCAGCCTCCTCTTTCTGT...CCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCGCAGTGAAGCTCGGTTaGATCATCTGCAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSAAVKLG*IICRAQ
Trigger: CTGAGCCCTGCAGATGATGCAACCGAGCTTCACTGC...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557348.5
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTGCCGCCGGGACCCCTaGCTGATGCAAGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQCRRDP*LMQAVK
Trigger: CTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS-3UTR GCA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGAGCTGCCCACATCTCTaGAGAGGCCGTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRSCPHL*RGRSTS
Trigger: GGAGGTGGAACGGCCTCTGCAGAGATGTGGGCAGCT...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557348.5
CDS-3UTR CCA 90 bp GGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: GGDDVRVLERRGNHLGSHSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LMWAMSASRCALTSSHTSDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: PGVMALRSPGQVFLLAVMSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...CATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: AGVVNEASIGAGASYDEPSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LQCSSKPGMGKALANCSTLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RCLQCSSKPGMGKALANCLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GGAAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: GSHPHGTVEKLRLGPQAAAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...TGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGTGCAGGGCTCAGAGCTaGCCGGAAAGGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLCRAQS*PERLSL
Trigger: CAAGCTGAGCCTTTCCGGCCAGCTCTGAGCCCTGCA...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557348.5
3UTR CAA 72 bp ACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTGATGTGGGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TMSACLKGEGIT*AATRPLMWAMS
Trigger: AGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDPEWPS*PAAHIS
Trigger: AGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGG...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQPEWPS*PAAHIS
Trigger: AGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGG...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PLMWAMSASRCALTSSHTAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGAAAGAGGAGGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LRLLITSGVGSDQRQKEEAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...CTCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp TCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAAGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SQVPSMLIKTRHGEGPGKAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...TTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: GVVNEASIGAGASYDEPWSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...CCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GVVNEASIGAGASYDEPWSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: AMSASRCALTSSHTSLMRAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...CCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSAWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: AGVVNEASIGAGASYDEPWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...CGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: HLSHAGVVNEASIGAGASEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...GCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: ASIGAGASYDEPWPEKSSPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGGACATTGACTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WTLTPHCAGSRSKASKARVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...CCGGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAATGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp CTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSHAGVVNEASIGAGASYVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...ATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLLALKGTPQLPQERGRVLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ITHLSHAGVVNEASIGAGLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...ACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGAAAGGCTCAGCTTGTaGGACCAGGCCGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GDDVRVLERRGNHLGSHQERLSL*DQAENS
Trigger: GGAGTTTTCGGCCTGGTCTCACAAGCTGAGCCTTTC...CTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557348.5
CDS-3UTR GCA 90 bp GACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCAGCTGCCCACATCTCTaGAGAGGCCGAGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: DFITHLSHAGVVNEASIGSCPHL*RGRAAQ
Trigger: TTGGGCGGCTCGGCCTCTGCAGAGATGTGGGCAGCT...GCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555563.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGAGCTGCCCACATCTCTaGAGAGGCCGAGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLSCPHL*RGRAAQ
Trigger: TTGGGCGGCTCGGCCTCTGCAGAGATGTGGGCAGCT...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VVVVTMSACLKGEGITLAAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: SSGGDDVRVLERRGNHLGESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...GCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GASYDEPWPEKSSSQCQLCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...CAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSALSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCATCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVVVTMSACLKGEGITLASRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: HLSHAGVVNEASIGAGASIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...GCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GACTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGCGCTGGCAGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: DSPLCRIQVKGFQGPALAVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...TGCCAGCGCCGGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR GCA 90 bp GGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: GDDVRVLERRGNHLGSHQDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...CTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGAVYTLRETNHCLAQGNPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...GTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTACCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCACCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: IQALAPAQPELHPGPWAAPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...TGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: PHGTVEKLRLGPQAAGRPASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...CGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCACAGAAAGAGGAGGCTaGAGCCCCGGGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: AVYTLRETNHCLAQGNPTTERGG*SPGGPC
Trigger: ACAAGGACCCCCGGGGCTGCAGCCTCCTCTTTCTGT...GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGGGGGTGGTTCTGATTTaGTCCATTCACCGCACCGCA +
Preference number: 4 (lower is better)
Translates to: GVVNEASIGAGASYDEPWGVVLI*SIHRTA
Trigger: TGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCC...CCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp GCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGCCCACATCTCTaGAGAGGCTCCACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ALVPAMMSRGRKSRAVSASCPHL*RGSTFK
Trigger: TTTGAAGGTGGAGCCTCTGCAGAGATGTGGGCAGCT...GGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555774.5
CDS-3UTR CCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACTCCGACAGGCTCTCCTaGCCTGTCCAGCCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHSDRLS*PVQPLF
Trigger: AAACAGGGGCTGGACAGGCCAGGAGAGCCTGTCGGA...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HGKVDSVLKCVRDLPASLDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...AAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LQCSSKPGMGKALANCSTCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: VPSMLIKTRHGEGPGKLLSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...GAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTATCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: AGVVNEASIGAGASYDEPSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...CGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp ATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: ITHLSHAGVVNEASIGAGAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...ACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: HLSHAGVVNEASIGAGASHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...GCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp ATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IQALGPQVHQHQVVVSTTVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...GGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLLALKGTPQLPQERGRVAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LSHAGVVNEASIGAGASYSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...ATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VYTLRETNHCLAQGNPTHPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTACCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: VGHVCQQVCFDFITHLSHAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...ATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: GASYDEPWPEKSSSQCQLEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...CAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: VVNEASIGAGASYDEPWPEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...CGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCACTGCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: MSACLKGEGITLAATRPLPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: MGKALANCSTRCLRLARRGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGAAAGAGGAGGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRLLITSGVGSDQRQKEEGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...CTCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RCLQCSSKPGMGKALANCGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAGGGTGAGGAAACAAGTGGTCAGAGCTCTAGGGAAGGCAGTGAGATCAGCTGGGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EGEETSGQSSREGSEISWGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...CCAGCTGATCTCACTGCCTTCCCTAGAGCTCTGACCACTTGTTTCCTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR TCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGGGGTCCACAGCGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: DSVLKCVRDLPASLGVHSACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GCTGTGGACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACCAGGGCACCATAAACTaGTACCCCAGTCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RPLMWAMSASRCALTSSHQGTIN*YPSQRG
Trigger: CCCCCGCTGACTGGGGTATCAGTTTATGGTGCCCTG...GTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555774.5
CDS-3UTR TCA 90 bp GGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGDDVRVLERRGNHLGSHAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...GTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
CDS-3UTR GCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: DFITHLSHAGVVNEASIGESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...GCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTGTTCTTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: VFLLAVMDTSSSTRSARAESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...AGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAAGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWASLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VYTLRETNHCLAQGNPTHSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...GTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATGAGGCCTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PWPEKSSSQCQLVVVNEACPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...GGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NEASIGAGASYDEPWPEKCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: GVVNEASIGAGASYDEPWLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...CCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWASRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GTGTTCTTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VFLLAVMDTSSSTRSARASRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...AGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAAGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACATCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QATDVGHVCQQVCFDFITSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...TGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTPAQLG*RSSLRQ
Trigger: TTGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQPAQLG*RSSLRQ
Trigger: TTGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPPAQLG*RSSLRQ
Trigger: TTGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCAATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TMSACLKGEGITLAATRPIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...TGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGAAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GMGKALANCSTRCLRLARKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...TCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LSHAGVVNEASIGAGASYDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...ATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SIGAGASYDEPWPEKSSSDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp ATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MSASRCALTSSHTSLMRAVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...CGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NAHQNQAWGRPWQTAPPVKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTACAGAAAGAGGAGGCTaGAGCCCCGGGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTTERGG*SPGGPC
Trigger: ACAAGGACCCCCGGGGCTGCAGCCTCCTCTTTCTGT...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGGGAGGGATCTACGCATaGGTAGTGGTGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPGGIYA*VVVAPL
Trigger: CAAAGGGGCCACCACTACGCATGCGTAGATCCCTCC...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS-3UTR GCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGAGCTGCCCACATCTCTaGAGAGGAGGAACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDESCPHL*RGGTRG
Trigger: CCCTCTTGTTCCTCCTCTGCAGAGATGTGGGCAGCT...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554604.5
CDS-3UTR CCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGATCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp ATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MSASRCALTSSHTSLMRATRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: LQCSSKPGMGKALANCSTAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: DDVRVLERRGNHLGSHQARPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...GGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp ACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TDVGHVCQQVCFDFITHLPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: NEASIGAGASYDEPWPEKWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGGGGTCTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KVDSVLKCVRDLPASLGVCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...GACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGCCATGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: CHGPSILQNLQGVLPEHGPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...CCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWARCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: LAVMDTSSSTRSARAPSRPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...CCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TDVGHVCQQVCFDFITHLLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GACTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGCGCTGGCATGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: DSPLCRIQVKGFQGPALACSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...TGCCAGCGCCGGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSSIKSTTLRKSSSRNCRAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...TCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATAACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GPWAAGPPAPGGCQYHLITLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...TATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: PLMWAMSASRCALTSSHTACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGGACATTGACTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGGTCTGGTGTCGGCTCTaGTCAGAGACAGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: WTLTPHCAGSRSKASKARVWCRL*SETERG
Trigger: TCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGAC...CCGGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAATGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGAAAGGCTCAGCTTGTaGGACCAGGCCGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQERLSL*DQAENS
Trigger: GGAGTTTTCGGCCTGGTCTCACAAGCTGAGCCTTTC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS-3UTR TCA 90 bp GTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATCAGGGCACCATAAACTaGTACCCCAGTCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VGHVCQQVCFDFITHLSHQGTIN*YPSQRG
Trigger: CCCCCGCTGACTGGGGTATCAGTTTATGGTGCCCTG...ATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555774.5
CDS-3UTR TCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGGTATCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTVSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGATAC...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp AGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCGTATCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: SSGGDDVRVLERRGNHLGVSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGATAC...GCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp CCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATGAGGCCGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PWPEKSSSQCQLVVVNEAAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...GGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
CDS-3UTR TCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTGCGAGAAGAGCTCGCTaGGGCGCCAAAGCTAACGGG +
Preference number: 4 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASARRAR*GAKANG
Trigger: CCCGTTAGCTTTGGCGCCTCAGCGAGCTCTTCTCGC...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS-3UTR GCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: YTLRETNHCLAQGNPTHSSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...ACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: SIGAGASYDEPWPEKSSSLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGPAQLG*RSSLRQ
Trigger: TTGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: WPEHSSEPAGSTPGTWGCPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...GCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGCCATGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: CHGPSILQNLQGVLPEHGIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...CCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTGATACCAGTGAGTAGCCTCGCTCTAGCAGGGCATCTGCCATGGCCCGAGCATATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LIPVSSLALAGHLPWPEHIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...ATGCTCGGGCCATGGCAGATGCCCTGCTAGAGCGAGGCTACTCACTGGTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CGGTGGTGGGAGCGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RWWERSGVHIEGDKSLFGDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...GCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCGCTCCCACCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VGHVCQQVCFDFITHLSHKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...ATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCACTCCATGAACCACTCTaGAAAGCTTGTCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: IQALAPAQPELHPGPWAALHEPL*KACPPK
Trigger: TTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAG...TGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp CTGATACCAGTGAGTAGCCTCGCTCTAGCAGGGCATCTGCCATGGCCCGAGCATAGCTGCCCACATCTCTaGAGAGGCTTCAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LIPVSSLALAGHLPWPEHSCPHL*RGFKSQ
Trigger: CTGGCTTTTGAAGCCTCTGCAGAGATGTGGGCAGCT...ATGCTCGGGCCATGGCAGATGCCCTGCTAGAGCGAGGCTACTCACTGGTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553837.5
CDS-3UTR GCA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVAILTS*PHLCRG
Trigger: TCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554604.5
CDS-3UTR CCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGTCCAGCCACCAACTCTaGTCTAGGGCAGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPSSHQL*SRAASC
Trigger: ACAGCTTGCTGCCCTAGACCAGAGTTGGTGGCTGGA...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000556825.5
ENST00000557487.5
CDS-3UTR CCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTCCAGCCACCAACTCTaGTCTAGGGCAGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQSSHQL*SRAASC
Trigger: ACAGCTTGCTGCCCTAGACCAGAGTTGGTGGCTGGA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000556825.5
ENST00000557487.5
CDS-3UTR CCA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSEDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGGACGGCCAGGTTGGCTaGGGACCCGGAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEDGQVG*GPGVGL
Trigger: CAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTC...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp TGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGGATACTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CDGTSVSRTGVLVGSDGYCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...GTATCCATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: NEASIGAGASYDEPWPEKSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GGAAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSHPHGTVEKLRLGPQAASYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...TGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAATCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGGGGTCTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: KVDSVLKCVRDLPASLGVSPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...GACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp TCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SSKPGMGKALANCSTRCLHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...CAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATGAGGCCCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: PWPEKSSSQCQLVVVNEAHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...GGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGTGCAGGGCTCAGAGCTaGCCGGAAAGGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGCRAQS*PERLSL
Trigger: CAAGCTGAGCCTTTCCGGCCAGCTCTGAGCCCTGCA...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414700.7
CDS-3UTR CCA 90 bp GGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: GDDVRVLERRGNHLGSHQRPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...CTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
CDS-3UTR TCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAACCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQPEWPS*PAAHIS
Trigger: AGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGG...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: VGHVCQQVCFDFITHLSHRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...ATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: TDVGHVCQQVCFDFITHLRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: AVYTLRETNHCLAQGNPTPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp TGGGAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WEHGKVDSVLKCVRDLPAVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...GGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: GVVNEASIGAGASYDEPWGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...CCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LNLLRLLITSGVGSDQRQGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...CTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGTCTTGTGAGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SLVSSGGDDVRVLERRGNACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...ATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGGGGTCCAGGGCACCATAAACTaGTACCCCAGTCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KVDSVLKCVRDLPASLGVQGTIN*YPSQRG
Trigger: CCCCCGCTGACTGGGGTATCAGTTTATGGTGCCCTG...GACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR TCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGTCCAGAGAGGGCAACTaGGATTCCAGAACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTSREGN*DSRTFP
Trigger: TGGGAAGGTTCTGGAATCTCAGTTGCCCTCTCTGGA...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR TCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGTTCTGGAGCCAAGCTTaGGATCAACGTCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPFWSQA*DQRPRG
Trigger: ACCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAA...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR TCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCGTATCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: RCLQCSSKPGMGKALANCVSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGATAC...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR GCA 90 bp TTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNLLRLLITSGVGSDQRQAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...CTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACATGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QATDVGHVCQQVCFDFITCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...TGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: GAVYTLRETNHCLAQGNPLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...GGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: PGVMALRSPGQVFLLAVMLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...CATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACATCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAATCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: WPEHSSEPAGSTPGTWGCKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...GCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GGDDVRVLERRGNHLGSHKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...GTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: MSASRCALTSSHTSLMRADVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...CGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RPLMWAMSASRCALTSSHDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...GTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: GHVCQQVCFDFITHLSHADVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...CGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: VYTLRETNHCLAQGNPTHVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...GTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GTGTTCTTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: VFLLAVMDTSSSTRSARAVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...AGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAAGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: FPGAFNAHQNQAWGRPWQVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...TTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTGACTTGTTTCGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PGKLLHPLPEVGQTLTCFGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...GAAACAAGTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: NEASIGAGASYDEPWPEKGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TGCCATGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: CHGPSILQNLQGVLPEHGGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...CCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAAAACAGGAAGGAGGGTaGCTACCCACCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKKQEGG*LPTPAC
Trigger: GCAGGCAGGGGTGGGTAGGCACCCTCCTTCCTGTTT...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGGCAGTGAAGCTCGGTTaGATCATCTGCAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVAVKLG*IICRAQ
Trigger: CTGAGCCCTGCAGATGATGCAACCGAGCTTCACTGC...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTCCTTCCAGCCCTCACTaGCGCCGGGACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFPSSPH*RRDPCL
Trigger: CAGGCAGGGGTCCCGGCGGCAGTGAGGGCTGGAAGG...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS-3UTR CCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLTRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LQCSSKPGMGKALANCSTSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: NAHQNQAWGRPWQTAPPVSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GTGTTCTTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VFLLAVMDTSSSTRSARAAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...AGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAAGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQCSSKPGMGKALANCSTAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...GGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RPLMWAMSASRCALTSSHAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...GTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RCLQCSSKPGMGKALANCAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACAAGACAAATCACTGTTTaGCCCAGGGGAACCCCACCC +
Preference number: 4 (lower is better)
Translates to: QATDVGHVCQQVCFDFITRQITV*PRGTPP
Trigger: GGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT...TGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CCA 90 bp AGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SIGAGASYDEPWPEKSSSRPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR CCA 90 bp CCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATGAGGCCAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: PWPEKSSSQCQLVVVNEARPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...GGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
3UTR CAA 72 bp GGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACAAGCTCTAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: GVMALRSPGQVF*LAVMDTSSSTR
Trigger: GCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PSSIKSTTLRKSSSRNCRAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...TCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAATGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: FPGAFNAHQNQAWGRPWQWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...TTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: NAHQNQAWGRPWQTAPPVEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: RCLQCSSKPGMGKALANCPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: QATDVGHVCQQVCFDFITPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...TGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: MSASRCALTSSHTSLMRAPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...CGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAACGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: NEASIGAGASYDEPWPEKGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCACTGTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: MSACLKGEGITLAATRPLCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SILQNLQGVLPEHGGAGLTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...CAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TGGACATTGACTCCCCACTGTGCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WTLTPHCAGSRSKASKARTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...CCGGGCCTTGGAAGCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAATGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR TCA 90 bp CCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTGACTTGTTTCACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PGKLLHPLPEVGQTLTCFTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...GAAACAAGTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: LLLALKGTPQLPQERGRVRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: FPGAFNAHQNQAWGRPWQKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...TTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGGAGCGGTGTACACATTaGGGGAGACAAATCACTGTT +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEERCTH*GRQITV
Trigger: AACAGTGATTTGTCTCCCTCAATGTGTACACCGCTC...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp TTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAGTCTGGTGTCGGCTCTaGTCAGAGACAGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FPGAFNAHQNQAWGRPWQVWCRL*SETERG
Trigger: TCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGAC...TTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
CDS-3UTR TCA 90 bp GCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AMSASRCALTSSHTSLMRAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...CCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR GCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: RPLMWAMSASRCALTSSHLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...GTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTCCAGGCCACGACACTaGCTGTCCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLSRPRH*LSFSLC
Trigger: GCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGA...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RPLMWAMSASRCALTSSHIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...GTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CATTTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: HFPGAFNAHQNQAWGRPWIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...CCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: HAGVVNEASIGAGASYDEKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...CTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: AVYTLRETNHCLAQGNPTVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AGTCTTGTGAGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: SLVSSGGDDVRVLERRGNVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...ATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGAAAAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NLLRLLITSGVGSDQRQKKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...TTTCTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: WEGRLYLALALSERSSLPPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: ARCDGTSVSRTGVLVGSDGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...ATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTGGGGTGGTTCTGATTTaGTCCATTCACCGCACCGCA +
Preference number: 4 (lower is better)
Translates to: LMWAMSASRCALTSSHTSGVVLI*SIHRTA
Trigger: TGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCC...AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTAGCTGCCCACATCTCTaGAGAGGCCCAGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSSCPHL*RGPVSG
Trigger: CCCGCTGACTGGGCCTCTGCAGAGATGTGGGCAGCT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553474.5
ENST00000555116.5
CDS-3UTR GCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCCCGGGGCTCCTTCTTaGTCACTCACCAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVPGAPS*SLTSLA
Trigger: AGCAAGACTGGTGAGTGAGCAAGAAGGAGCCCCGGG...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR GCA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTATTCATCCACCACCTCTaGTCCCCCATAGTATCCGAG +
Preference number: 4 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVFIHHL*SPIVSE
Trigger: CTCGGATACTATGGGGGAGCAGAGGTGGTGGATGAA...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557269.5
CDS-3UTR CCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PSMLIKTRHGEGPGKLLHSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...GTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AMSASRCALTSSHTSLMRSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...CCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp TCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAAAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SQVPSMLIKTRHGEGPGKSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...TTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp ACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: TDVGHVCQQVCFDFITHLSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LMWAMSASRCALTSSHTSSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: PLMWAMSASRCALTSSHTSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAACTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LLALKGTPQLPQERGRVSHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ARCDGTSVSRTGVLVGSDVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...ATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VVVVTMSACLKGEGITLAVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
3UTR CAA 72 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACCCACAGTAATGGAAAC +
Preference number: 4 (lower is better)
Translates to: GAVYTLRETNHC*AQGNPTHSNGN
Trigger: GTTTCCATTACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGTCTTGTGAGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: SLVSSGGDDVRVLERRGNPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...ATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTCTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: ITHLSHAGVVNEASIGAGGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...ACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAAAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SQVPSMLIKTRHGEGPGKRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...TTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NAHQNQAWGRPWQTAPPVRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VGHVCQQVCFDFITHLSHAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...ATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR GCA 90 bp AACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NKLNLLRLLITSGVGSDQAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...CTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSEAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAATGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSPAQLG*RSSLRQ
Trigger: TTGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GHVCQQVCFDFITHLSHAPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...CGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: DFITHLSHAGVVNEASIGPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...GCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: DFITHLSHAGVVNEASIGVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSEKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: RCLQCSSKPGMGKALANCPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCTGACTTGTTTCGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: PGKLLHPLPEVGQTLTCFASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...GAAACAAGTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGTCCGACAGGCTCTCCTaGCCTGTCCAGCCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSESDRLS*PVQPLF
Trigger: AAACAGGGGCTGGACAGGCCAGGAGAGCCTGTCGGA...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp TTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAGATGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: FIYKVHNSPEVILTELSRCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...TCTCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSETRPLM*AMSASR
Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFLHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALALHPGP*AAGPPA
Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTGCATGGGGAAGGCCCTaGCAAACTGCTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSAWGRP*QTAPPV
Trigger: AACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGC...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 4 (lower is better)
Translates to: GGDDVRVLERRGNHLGSHLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...GTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR CCA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVRPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR CCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGGAGCAGACAGTGAGTaGGAACTGGCTGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNGADSE*ELAGPG
Trigger: CCCCGGGCCAGCCAGTTCCCACTCACTGTCTGCTCC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGGTGGTGGCCCCTTTGTaGCCTTTTGGGAATTGTAGT +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVVVAPL*PFGNCS
Trigger: ACTACAATTCCCAAAAGGCCACAAAGGGGCCACCAC...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGCTGCGTTGCTGTGCTaGGCCCGAATGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNAALLC*ARMAIL
Trigger: CAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCCCCATGATCCGGTCGTaGGGTTGCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPPMIRS*GCRRAV
Trigger: CACAGCCCTTCTGCAACCTCACGACCGGATCATGGG...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCGCAGGTCCAGCCCCATaGTCCGGTCGTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAAGPAP*SGREVA
Trigger: TGCAACCTCACGACCGGATCATGGGGCTGGACCTGC...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAACCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFERCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSERCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAACTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAGACTTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FIYKVHNSPEVILTELSRLSGRR*ALTWPL
Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAAG...TCTCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: EGRLYLALALSERSSLPHCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAAACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SQVPSMLIKTRHGEGPGKTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...TTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAGAGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FIYKVHNSPEVILTELSRGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...TCTCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGGCTCTTGCCCTAAGTaGGAGGTCTTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPGSCPK*EVFPPA
Trigger: TGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGGCCTGCTACTGGCTCTaGAGGGCACTCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEACYWL*RALLNF
Trigger: GAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGC...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGGAGCGGTGTACACATTaGGGGAGACAAATCACTGTT +
Preference number: 4 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVERCTH*GRQITV
Trigger: AACAGTGATTTGTCTCCCTCAATGTGTACACCGCTC...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSPAQLG*RSSLRQ
Trigger: TTGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: AMSASRCALTSSHTSLMRKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...CCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GHVCQQVCFDFITHLSHAKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...CGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: LMWAMSASRCALTSSHTSVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCCCGGAACATGGGGGTaGAGGCCTGCTTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAPGTWG*RPALGP
Trigger: TGGCCCTAAAGCAGGCCTGCACCCCCATGTTCCGGG...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGTGCCTACCCACCCCTaGCTGCTACTGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSVPTHP*LLLALK
Trigger: CTTCAGAGCCAGTAGCAGGCAGGGGTGGGTAGGCAC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTAGCTGCCCACATCTCTaGAGAGGCCGTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSSCPHL*RGRSTS
Trigger: GGAGGTGGAACGGCCTCTGCAGAGATGTGGGCAGCT...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414700.7
CDS-3UTR GCA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCTCCATGAACCACTCTaGAAAGCTTGTCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTLHEPL*KACPPK
Trigger: TTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAG...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGGGGTGGTTCTGATTTaGTCCATTCACCGCACCGCA +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLGVVLI*SIHRTA
Trigger: TGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCAGCTGCCCACATCTCTaGAGAGGCCCAGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALASCPHL*RGPVSG
Trigger: CCCGCTGACTGGGCCTCTGCAGAGATGTGGGCAGCT...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553474.5
ENST00000555116.5
CDS-3UTR CCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTTCCAGCCACCAACTCTaGTCTAGGGCAGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSSSHQL*SRAASC
Trigger: ACAGCTTGCTGCCCTAGACCAGAGTTGGTGGCTGGA...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000556825.5
ENST00000557487.5
CDS-3UTR CCA 90 bp TCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTTGTAGACGGCCAGGTTaGCTGGGGACCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SFNKLNLLRLLITSGVGSCRRPG*LGTRSR
Trigger: CCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACA...AGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SDTVIMTGVQTESAWALLSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCTCTCCCGGCCAGTCTTaGGGTCCACAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALASPGQS*GPQPSP
Trigger: GGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGA...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAACATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNPEWPS*PAAHIS
Trigger: AGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGG...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSESRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGTAGAAGATGAGCCCTaGCCTGGCCCCTCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTVEDEP*PGPSKS
Trigger: ACTCTTCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TISFNKLNLLRLLITSGVAGRPV*WHFGLQ
Trigger: CTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGC...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp CACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: HGKVDSVLKCVRDLPASLRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...AAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGCTCCACCCGTTGCCTaGGGTTGGCCAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSAPPVA*GWPDAD
Trigger: GTCAGCGTCTGGCCAACCTCAGGCAACGGGTGGAGC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACCAGGGCACCATAAACTaGTACCCCAGTCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNQGTIN*YPSQRG
Trigger: CCCCCGCTGACTGGGGTATCAGTTTATGGTGCCCTG...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTTCTGGAGCCAAGCTTaGGATCAACGTCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLFWSQA*DQRPRG
Trigger: ACCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAA...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGCCATCCTGACCAGCTaGCCACATCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFAILTS*PHLCRG
Trigger: GCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGC...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGGCTGCGTTaGTGTGCTGAGCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFESGLR*CAEPEW
Trigger: CCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTC...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFSLSLG*VAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACT...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: CFDFITHLSHAGVVNEASKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTAACTGCTCCACCCGTTaGCTGAGGTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFNCSTR*LRLARR
Trigger: GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTT...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCAAGGCCCTGGCAAACTaGTCCACCCGTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAKALAN*STRCLR
Trigger: CCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTT...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGCTCACTCACCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGLTHQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGGTGAGTGAG...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFESTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTGCAGGGCATCTGCCATaGCCCGAGCATTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSAGHLP*PEHSSE
Trigger: TTCTGAAGAATGCTCGGGCCATGGCAGATGCCCTGC...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TGPGRGKESNFESVGLISKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 4 (lower is better)
Translates to: PCLLLALKGTPQLPQERGLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 4 (lower is better)
Translates to: GPGRGKESNFESVGLISQLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 4 (lower is better)
Translates to: LALKGTPQLPQERGRVSDLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGAGACAAATCACTGTTTaGCCCAGGGGAACCCCACCC +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFERQITV*PRGTPP
Trigger: GGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGGCAGTGAGATCAGCTaGGGGAGGGAGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFGSEIS*GREQTV
Trigger: CACTGTCTGCTCCCTCCCCCAGCTGATCTCACTGCC...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGATGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: PSSIKSTTLRKSSSRNCRWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...TCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCGGGCGTAGTCAATaGGGCGAGCATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSCGRSQ*GEHRRW
Trigger: CCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCA...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTCGATGTCCGCGTGCTTaGAAGGCGAGGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFRCPRA*KARESP
Trigger: AGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCG...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: RLYLALALSERSSLPHQKGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: FWEGRLYLALALSERSSLCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTAAGAGGACGCGTCTCTaGCACTGTGATCATGACAGG +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSKRTRL*HCDHDR
Trigger: CCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTT...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGAGCGGTGTACACATTaGGGGAGACAAATCACTGTT +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVERCTH*GRQITV
Trigger: AACAGTGATTTGTCTCCCTCAATGTGTACACCGCTC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCAGAGAGGGCAACTaGGATTCCAGAACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSSREGN*DSRTFP
Trigger: TGGGAAGGTTCTGGAATCTCAGTTGCCCTCTCTGGA...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGTATCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSVSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGATAC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSAGCSQ*GQFWAG
Trigger: TCCAGCCCAAAACTGGCCTCATTGACTACAACCAGC...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSCPAPV*FPSLSL
Trigger: CAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACA...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCCCCATAGTATCTCTTaGCAGGATAACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSPHSIS*QDNPPS
Trigger: ACTCGGAGGGTTATCCTGGCAAGAGATACTATGGGG...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTAGCTGCCCACATCTCTaGAGAGGCTTCAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSSCPHL*RGFKSQ
Trigger: CTGGCTTTTGAAGCCTCTGCAGAGATGTGGGCAGCT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449049.7
ENST00000553837.5
CDS-3UTR CCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNSKARR*HSSSIS
Trigger: TGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGA...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFESTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSESTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: NKLNLLRLLITSGVGSDQHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...CTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CCA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: YKFWEGRLYLALALSERSHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 4 (lower is better)
Translates to: PGRGKESNFESVGLISQVLSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGAGGCCAGTTTTGGGCTaGACAGACACACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLRPVLG*TDTQTA
Trigger: AGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCT...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACAGTAGGGCTGGACATTaGCTCCCCACTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNSRAGH*LPTVQD
Trigger: ATCCTGCACAGTGGGGAGTCAATGTCCAGCCCTACT...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCCCAGCAGGTGTGCTTTaGCTTCATCACACACCTCTC +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPPAGVL*LHHTPL
Trigger: GAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGG...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNDVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALADVGHV*QQVCFD
Trigger: GTCAAAGCACACCTGCTGGCAGACATGGCCCACATC...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSEGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: LSYKFWEGRLYLALALSEPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAAAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSSYDEP*PEKSSS
Trigger: ACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp AAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: KPMLTPSSIKSTTLRKSSSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...GGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CCA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
3UTR CAA 72 bp AGCTTGGCAGTCTTGCTCTTCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAGTCCACAACTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SLAVLLFTSKPM*TPSSIKSTTLR
Trigger: CCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTTGGCTGATATCCGCTTaGCGTCAGACATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFWLISA*RQTCSR
Trigger: ACGGCTACATGTCTGACGTCAAGCGGATATCAGCCA...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: TVIMTGVQTESAWALLLSCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp CCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSSIKSTTLRKSSSRNCRTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...TCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp TTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGGAACTGTCGAGAAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FIYKVHNSPEVILTELSRRLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...TCTCGACAGTTCCGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCGTCTGGTGTCGGCTCTaGTCAGAGACAGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAVWCRL*SETERG
Trigger: TCCTCTTTCTGTCTCTGATCAGAGCCGACACCAGAC...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR TCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTTCCAGAGAGGGCAACTaGGATTCCAGAACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFSREGN*DSRTFP
Trigger: TGGGAAGGTTCTGGAATCTCAGTTGCCCTCTCTGGA...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTATTGACTCCCCACTGTaGAGGATCCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFIDSPL*RIQVKG
Trigger: GCCTTTGACCTGGATCCTGCACAGTGGGGAGTCAAT...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KPMLTPSSIKSTTLRKSSGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...GGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTTCCACCAGCACCAGGTaGTTGTCAGTACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: NRKAFYFTGPGRGKESNFSTSTR*LSVPPD
Trigger: ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGA...AAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGCTGCAGAAGTTCTCTaGGGCAATGAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TISFNKLNLLRLLITSGVAAEVL*GNELQA
Trigger: GGCCTGGAGCTCATTGCCTCAGAGAACTTCTGCAGC...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328923.8
CDS-3UTR TCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCAGGTTGGCCAGACGCTaGCTTGTTTCTGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALARLARR*LVSESL
Trigger: TAAGGACTCAGAAACAAGTCAGCGTCTGGCCAACCT...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACAC +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNVCQQV*FDFITH
Trigger: GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGTGACGATGTCCGCGTaGTTGAAAGGCGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSVTMSA*LKGEGI
Trigger: GATTCCCTCGCCTTTCAAGCACGCGGACATCGTCAC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR GCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGGTTCAAACAGAAAGTaGCTGGGCCCTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNGSNRK*LGPPSK
Trigger: CTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTAGTACTCCCGGAACATaGGGGTGCAGGCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSSTPGT*GCRPAL
Trigger: TAAAGCAGGCCTGCACCCCCATGTTCCGGGAGTACT...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp TCTAAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCAGTAACTTTGAGTCTGTaGGCCTCATTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SKPMLTPSSIKSTTLRKSVTLSL*ASFPRC
Trigger: GCACCTGGGAAATGAGGCCCACAGACTCAAAGTTAC...TGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCAGTTCTCTGAGGCAATaGGCTCCAGGCCACGACACT +
Preference number: 4 (lower is better)
Translates to: TISFNKLNLLRLLITSGVSSLRQ*APGHDT
Trigger: AGTGTCGTGGCCTGGAGCTCATTGCCTCAGAGAACT...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328923.8
CDS-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGAAGATGGACGTGGCTaGTATCCGCTTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSEDGRG*YPLDVR
Trigger: TCTGACGTCAAGCGGATATCAGCCACGTCCATCTTC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSPRRVL*VVVVTM
Trigger: CATCGTCACCACCACTACTCACAAGACTCTTCGAGG...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCGGAACACGGCAAAGTTaGTTCGGTCCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAGTRQS*FGPQMC
Trigger: ACACATTTGAGGACCGAATCAACTTTGCCGTGTTCC...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR TCA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACACGCTGACTTGTTTCTaGGTCCTTAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNTLTCF*VLKQEG
Trigger: TCCTTCCTGCTTAAGGACTCAGAAACAAGTCAGCGT...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR TCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTTCTGGAGCCAAGCTTaGGATCAACGTCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSFWSQA*DQRPRG
Trigger: ACCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAA...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR GCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSLSFSL*SNSHIS
Trigger: TGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAG...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLSYKFWEGRLYLALALSKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTCATCAAAACCAGGCATaGGGAAGGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSHQNQA*GRPWQT
Trigger: AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATG...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGTAGAGCAATGCAGGTaGGAGGGGAGACCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSVEQCR*EGRPLA
Trigger: TGCTAAAGGTCTCCCCTCCCACCTGCATTGCTCTAC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553474.5
CDS-3UTR TCA 90 bp TCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTTGTTCTTGTTGGCAGTaGTGGATACAAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SFNKLNLLRLLITSGVGSCSCWQ*WIQALA
Trigger: TGCTAGAGCTTGTATCCATCACTGCCAACAAGAACA...AGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR GCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGGAGCTTGGCAGTCTTaGTCTTCACCTCTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSGAWQS*SSPLSQ
Trigger: TTGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR GCA 90 bp TCTAAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCAGCCTCATTTCCCAGGTaGCTTCAATGCTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: SKPMLTPSSIKSTTLRKSASFPR*LQCSSK
Trigger: TTTTGATGAGCATTGAAGGCACCTGGGAAATGAGGC...TGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR GCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTAAGTCGAGCAGTCAGTaGCAGCTGGTTGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSKSSSQ*QLVVVN
Trigger: ATTGACTACAACCAGCTGGCACTGACTGCTCGACTT...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR GCA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCCCCAGGTGCCTTCAATaGTCATCAAAACCAGGCATG +
Preference number: 4 (lower is better)
Translates to: TISFNKLNLLRLLITSGVPRCLQ*SSKPGM
Trigger: CATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGG...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CCA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTCAGTTACAAATTCTaGGAAGGGAGACTATACCTG +
Preference number: 4 (lower is better)
Translates to: KDLLSYKFWEGRLYLALALSYKF*EGRLYL
Trigger: CAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CCA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KKRSSQLQILGRETIPGSKDLKS*SLAVLL
Trigger: GAGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS GCA 90 bp GCAGAGGTTAGCCCCCTACCCGTTCCACCTCCTTCCAGCCCTCACTaGCGCCGGGACCCCTGCCTGATGCAAGCAGTGAAGCTCGGTTGC +
Preference number: 5 (lower is better)
Translates to: AEVSPLPVPPPSSPH*RRDPCLMQAVKLGC
Trigger: GCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCAGTGAGGGCTGGAAGGAGGTGGAACGGGTAGGGGGCTAACCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553529.5
CDS GCA 90 bp CTGGCCTGTCCAGCCCCTGTTTGCTTCCCCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCGAATGGCCATCCTGACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LACPAPVCFPSLSLG*VAVLSPNGHPDQLP
Trigger: GGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553949.1
ENST00000553950.5
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555563.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557302.1
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
ENST00000557740.5
CDS GCA 90 bp GAGGCCGTTCCACCTCCTTCCAGCCCTCACTGCCGCCGGGACCCCTaGCTGATGCAAGCAGTGAAGCTCGGTTGCATCATCTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: EAVPPPSSPHCRRDP*LMQAVKLGCIICRA
Trigger: AGCCCTGCAGATGATGCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCAGTGAGGGCTGGAAGGAGGTGGAACGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS-3UTR CAA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCTGTCCAGCCCCTGTTaGCTTCCCCAGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: QALAPAQPELHPGPWAAGLSSPC*LPQSES
Trigger: AGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAG...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS TCA 90 bp CACTGGGAAGGTACAGGTGGGTTCCCCCACTGGGAGCACCATCCCTaGCACTGCCCTCCAGCCCTCACCTCTTGCCAGGATAACCCTCCG +
Preference number: 5 (lower is better)
Translates to: HWEGTGGFPHWEHHP*HCPPALTSCQDNPP
Trigger: CGGAGGGTTATCCTGGCAAGAGGTGAGGGCTGGAGGGCAGTGTCAGGGATGGTGCTCCCAGTGGGGGAACCCACCTGTACCTTCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553868.1
ENST00000553950.5
ENST00000554467.5
ENST00000555213.1
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCCCAGTCAGCGGGGGAA +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEAQSAGE
Trigger: TTCCCCCGCTGACTGGGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553474.5
ENST00000554656.5
ENST00000555116.5
CDS TCA 90 bp GCTCTAGGGAAGGCAGTGAGATCAGCTGGGGGAGGGAGCAGACAGTaGGTGGGAACTGGCTGGCCCGGGGCTCCTTCTTGCTCACTCACC +
Preference number: 5 (lower is better)
Translates to: ALGKAVRSAGGGSRQ*VGTGWPGAPSCSLT
Trigger: GGTGAGTGAGCAAGAAGGAGCCCCGGGCCAGCCAGTTCCCACTCACTGTCTGCTCCCTCCCCCAGCTGATCTCACTGCCTTCCCTAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554467.5
ENST00000556798.1
ENST00000557529.1
CDS TCA 90 bp ACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCTGGAGATaGGACAGTAGCAGCTGTCACCCTAGGCCTGGACCCAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: TCREYSRNMGVQAWR*DSSSCHPRPGPKPC
Trigger: GCAGGGCTTGGGTCCAGGCCTAGGGTGACAGCTGCTACTGTCTCATCTCCAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS GCA 90 bp AGGATCACTGTCCGACAGGCTCTCCTGGCCTGTCCAGCCCCTGTTTaGTTCCCCAGTCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: RITVRQALLACPAPV*FPSLSLGCVAVLSP
Trigger: CGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAGGCCAGGAGAGCCTGTCGGACAGTGATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553949.1
ENST00000553950.5
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555563.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557302.1
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
ENST00000557740.5
CDS GCA 90 bp CACTGCCGCCGGGACCCCTGCCTGATGCAAGCAGTGAAGCTCGGTTaGATCATCTGCAGGGCTCAGAGCTGGCCGGAAAGGCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HCRRDPCLMQAVKLG*IICRAQSWPERLSL
Trigger: CAAGCTGAGCCTTTCCGGCCAGCTCTGAGCCCTGCAGATGATGCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS-3UTR CAA 90 bp GGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: GASYDEPWPEKSSSQCQLGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...CAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: RPLGRRSTSTRWLSVPPDISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...ATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCCGAGCCGCCCAAAACA +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEAEPPKT
Trigger: TGTTTTGGGCGGCTCGGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000553324.5
ENST00000553950.5
ENST00000554467.5
ENST00000554600.5
ENST00000555563.5
ENST00000556689.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557740.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCCGTTCCACCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEAVPPPS
Trigger: GGAAGGAGGTGGAACGGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414700.7
ENST00000557302.1
ENST00000557348.5
CDS TCA 90 bp AGGCCCGACCTCAGGGAGCCTGACCTGGCCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGA +
Preference number: 5 (lower is better)
Translates to: RPDLREPDLAPRRVL*VVVVTMSACLKGEG
Trigger: TCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACTCTTCGAGGGGCCAGGTCAGGCTCCCTGAGGTCGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 90 bp GGGAGGGATGAGCATAGCCCAAGGTCACCTGGCAGTCATCCAGCATaGGAGCCCCTTCCCTCCTCAAACCCCAGGTCTCACCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GRDEHSPRSPGSHPA*EPLPSSNPRSHQAA
Trigger: TGCGGCTTGGTGAGACCTGGGGTTTGAGGAGGGAAGGGGCTCCCATGCTGGATGACTGCCAGGTGACCTTGGGCTATGCTCATCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556798.1
CDS-3UTR CAA 90 bp CGTGAGGTTGCAGAAGGGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: REVAEGLCRRPGWLGTRSDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...ACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCCCTTCTGCAACCTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS-3UTR CAA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: NEASIGAGASYDEPWPEKGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCAGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: APAQPELHPGPWAAGPPAGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS TCA 90 bp TGCATCATCTGCAGGGCTCAGAGCTGGCCGGAAAGGCTCAGCTTGTaGGACCAGGCCGAAAACTCCGCTCATTTGCCAGCACCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: CIICRAQSWPERLSL*DQAENSAHLPAPGP
Trigger: CGGACCCGGTGCTGGCAAATGAGCGGAGTTTTCGGCCTGGTCTCACAAGCTGAGCCTTTCCGGCCAGCTCTGAGCCCTGCAGATGATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414700.7
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTTCCCACCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEASHPQE
Trigger: TTCCTGTGGGTGGGAAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555773.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGTTAGCCCCCTACCCGTT +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEVSPLPV
Trigger: AACGGGTAGGGGGCTAACCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553529.5
CDS GCA 90 bp AGGGCTGCAGGTGGGAATGAATTCCTCTCAGGTCCAGGCCAACAGTaGCCCAGGAATAGGCCTGAAGGCAGGGAAAGGCAAGGCCCGACC +
Preference number: 5 (lower is better)
Translates to: RAAGGNEFLSGPGQQ*PRNRPEGRERQGPT
Trigger: GGTCGGGCCTTGCCTTTCCCTGCCTTCAGGCCTATTCCTGGGGCACTGTTGGCCTGGACCTGAGAGGAATTCATTCCCACCTGCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 90 bp CCCACATCTCTGCAGAGGCCCAGTCAGCGGGGGAAGAGGCAGAGTTaGCAAGGGCTGAGGCCACAGATTGTAGAGCAATGCAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PTSLQRPSQRGKRQS*QGLRPQIVEQCRWE
Trigger: CTCCCACCTGCATTGCTCTACAATCTGTGGCCTCAGCCCTTGCCAACTCTGCCTCTTCCCCCGCTGACTGGGCCTCTGCAGAGATGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553474.5
ENST00000554656.5
CDS CCA 90 bp GCGGACCTGGGCCCCAAGGGCACAGCTCACGTGGGCTTGGTACACTaGATTCCAGTGGTAGAGGGAATCAGCCCCTCAATCCCATCCACA +
Preference number: 5 (lower is better)
Translates to: ADLGPKGTAHVGLVH*IPVVEGISPSIPST
Trigger: TGTGGATGGGATTGAGGGGCTGATTCCCTCTACCACTGGAATCCAGTGTACCAAGCCCACGTGAGCTGTGCCCTTGGGGCCCAGGTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS-3UTR CAA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: EGRLYLALALSERSSLPHGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GGAAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: GSHPHGTVEKLRLGPQAAISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...TGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GTTAAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: VKAGAPSRRPPGVMALRSGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...AGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AAGGCTGGGGCCCCAAGCCGCAGGCCGCCCGGTGTGATGGCACTTCGGTCTCCAACCACTCTGCAAAGCTaGTCCTCCAAAAGCCTATGT +
Preference number: 5 (lower is better)
Translates to: KAGAPSRRPPGVMALRSPTTLQS*SSKSLC
Trigger: ACATAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGT...TGGAGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGGGCCCCAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS TCA 90 bp CCCACCCACAGGAACAAGAGGGTCTTCCTGCAGGGCACCATAAACTaGTACCCCAGTCAGCGGGGGAAGAGGCAGAGTTGGCAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PTHRNKRVFLQGTIN*YPSQRGKRQSWQGL
Trigger: CAGCCCTTGCCAACTCTGCCTCTTCCCCCGCTGACTGGGGTATCAGTTTATGGTGCCCTGCAGGAAGACCCTCTTGTTCCTGTGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000555773.5
ENST00000555774.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTTTAGCAGTCCGTGAG +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEALAVRE
Trigger: CTCACGGACTGCTAAAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557427.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTCCACCTTCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEAPPSKA
Trigger: GGCTTTTGAAGGTGGAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555774.5
CDS GCA 90 bp GAGGCAATGAGCTCCAGGCCACGACACTGCCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCAGGATCACTGTCCGACAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: EAMSSRPRHCLSFSL*SNSHISGSLSDRLS
Trigger: GGAGAGCCTGTCGGACAGTGATCCTGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGAGCTCATTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553949.1
ENST00000553950.5
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555563.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557302.1
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
CDS-3UTR CAA 90 bp ATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: IQALGPQVHQHQVVVSTTASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp ATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGACGCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: MGKALANCSTRCLRLARRASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GCGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: PCLLLALKGTPQLPQERGISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: GPGRGKESNFESVGLISQISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GGCTGTGTAGACGGCCAGGTTGGCTGGGGACCCGGAGTAGGGCTGGACATTGACTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: GCVDGQVGWGPGVGLDIDWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...GTCAATGTCCAGCCCTACTCCGGGTCCCCAGCCAACCTGGCCGTCTACACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
CDS TCA 90 bp TCGGAAGAAGACCGTTCGGAGAACGCATGCGCGAGAAGAGCTCGCTaGGGCGCCAAAGCTAACGGGAGGGATCTACGCATGCGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: SEEDRSENACARRAR*GAKANGRDLRMRSG
Trigger: ACCACTACGCATGCGTAGATCCCTCCCGTTAGCTTTGGCGCCTCAGCGAGCTCTTCTCGCGCATGCGTTCTCCGAACGGTCTTCTTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTGATGCAAGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEADASSE
Trigger: TTCACTGCTTGCATCAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557703.5
CDS TCA 90 bp CTGCAGAGGAGGAACAAGAGGGTCTTCCTGCAGGGCACCATAAACTaGTACCCCAGTCAGCGGGGGAAGAGGCAGAGTTGGCAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LQRRNKRVFLQGTIN*YPSQRGKRQSWQGL
Trigger: CAGCCCTTGCCAACTCTGCCTCTTCCCCCGCTGACTGGGGTATCAGTTTATGGTGCCCTGCAGGAAGACCCTCTTGTTCCTCCTCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554975.5
CDS GCA 90 bp GAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTaGAGGCCTGGAGATGAGACAGTAGCAGCTGTCACCCTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: EHSSEPAGSTPGTWG*RPGDETVAAVTLGL
Trigger: CAGGCCTAGGGTGACAGCTGCTACTGTCTCATCTCCAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 90 bp TCTAAGCTGAAAAGAAGGACAAGGGACAGAGAAGGCAGAGGAAGCTaGCGGACCTGGGCCCCAAGGGCACAGCTCACGTGGGCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: SKLKRRTRDREGRGS*RTWAPRAQLTWAWY
Trigger: GTACCAAGCCCACGTGAGCTGTGCCCTTGGGGCCCAGGTCCGCCAGCTTCCTCTGCCTTCTCTGTCCCTTGTCCTTCTTTTCAGCTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 90 bp TGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATaGGGGTGCAGGCCTGGAGATGAGACAGTAGCAGCTGTCACCCTA +
Preference number: 5 (lower is better)
Translates to: WPEHSSEPAGSTPGT*GCRPGDETVAAVTL
Trigger: TAGGGTGACAGCTGCTACTGTCTCATCTCCAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 90 bp ACAGCATCGCAACTCGGAAGTCGCAGGAGGTCCAGCCACCAACTCTaGTCTAGGGCAGCAAGCTGTCGGAAGAAGACCGTTCGGAGAACG +
Preference number: 5 (lower is better)
Translates to: TASQLGSRRRSSHQL*SRAASCRKKTVRRT
Trigger: CGTTCTCCGAACGGTCTTCTTCCGACAGCTTGCTGCCCTAGACCAGAGTTGGTGGCTGGACCTCCTGCGACTTCCGAGTTGCGATGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554600.5
ENST00000556825.5
ENST00000557740.5
CDS-3UTR CAA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: NEASIGAGASYDEPWPEKDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: GAGASYDEPWPEKSSSQCASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp ACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: TDVGHVCQQVCFDFITHLGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: PQLPQERGRVSDTVIMTGGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...CCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: NEASIGAGASYDEPWPEKTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: TGPGRGKESNFESVGLISISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: PLMWAMSASRCALTSSHTISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: SYDEPWPEKSSSQCQLVVISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...TACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: RHGEGPGKLLHPLPEVGQGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...CTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp ATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: IQALGPQVHQHQVVVSTTGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...GGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: ASIGAGASYDEPWPEKSSWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...GCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: PGVMALRSPGQVFLLAVMKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...CATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp ATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 5 (lower is better)
Translates to: IQALGPQVHQHQVVVSTTSMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...GGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
CDS TCA 90 bp TCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTTCAAAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SESGLRCCAEPEWPS*PAAHISAEASKASS
Trigger: AGAACTGGCTTTTGAAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449049.7
ENST00000553837.5
CDS GCA 90 bp CCAGGCCTGGGGCAAAGCCAGAGGCAGCATTCTCAGAAACCCATCTaGCATGAGCAGTGGCCCCTCAATGCCACCTACCCACTCAAACTT +
Preference number: 5 (lower is better)
Translates to: PGLGQSQRQHSQKPI*HEQWPLNATYPLKL
Trigger: AAGTTTGAGTGGGTAGGTGGCATTGAGGGGCCACTGCTCATGGCAGATGGGTTTCTGAGAATGCTGCCTCTGGCTTTGCCCCAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553868.1
ENST00000554467.5
CDS CCA 90 bp GTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGTCAGTGCCAGGTTGAGCTTATAGGG +
Preference number: 5 (lower is better)
Translates to: VNEASIGAGASYDEP*PEKSSSQCQVELIG
Trigger: CCCTATAAGCTCAACCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557487.5
CDS CCA 90 bp CAGAGTTGGCAAGGGCTGAGGCCACAGATTGTAGAGCAATGCAGGTaGGAGGGGAGACCTTTAGCAGTCCGTGAGGAAGAGCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: QSWQGLRPQIVEQCR*EGRPLAVREEELCG
Trigger: CCCACACAGCTCTTCCTCACGGACTGCTAAAGGTCTCCCCTCCCACCTGCATTGCTCTACAATCTGTGGCCTCAGCCCTTGCCAACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554656.5
CDS-3UTR CAA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCCTGTCCAGCCCCTGTTaGCTTCCCCAGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPLSSPC*LPQSES
Trigger: AGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAG...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp CTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: LALKGTPQLPQERGRVSDDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...GTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: VVVVTMSACLKGEGITLADPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp TCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: SMLIKTRHGEGPGKLLHPDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...CGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCAGGCCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: RAFFRTCREYSRNMGVQAASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: RLYLALALSERSSLPHQKGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: GAVYTLRETNHCLAQGNPTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: LLLALKGTPQLPQERGRVTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: EGRLYLALALSERSSLPHTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: SSGGDDVRVLERRGNHLGTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: PCLLLALKGTPQLPQERGTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCGCAGGTACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: QALAPAQPELHPGPWAAGTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...ACCTGCGGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp TGGCCCGAGCATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTGCTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: WPEHSSEPAGSTPGTWGCWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...GCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATGCTCGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGCAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: RCLQCSSKPGMGKALANCKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...GCAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GGCATGGGGAAGGCCCTGGCAAACTGCTCCACCCGTTGCCTGAGGTTGGCCAGAGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: GMGKALANCSTRCLRLARGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...TCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTTGCCAGGGCCTTCCCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TTGTTGGCAGTGATGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACC +
Preference number: 5 (lower is better)
Translates to: LLAVMDTSSSTRSARAPSETNHC*AQGNPT
Trigger: GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTC...GGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCATCACTGCCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp GTAGTGGTGGTGACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAAGGGGTGGTTCTGATTaGCTCCATTCACCGCACCGC +
Preference number: 5 (lower is better)
Translates to: VVVVTMSACLKGEGITLARGGSD*LHSPHR
Trigger: GCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCT...TGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGTCACCACCACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGGTTCTGGAGCCAAGCTaGAGATCAACGTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRVLEPS*RSTSKG
Trigger: CCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAAC...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGCCCGGGGCTCCTTCTaGCTCACTCACCAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: FWEGRLYLALALSERSSLARGSF*LTHQSC
Trigger: GCAAGACTGGTGAGTGAGCAAGAAGGAGCCCCGGGC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR CAA 90 bp ACGATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCAGTAGTGGTGGCCCCTTaGTGGCCTTTTGGGAATTGT +
Preference number: 5 (lower is better)
Translates to: TMSACLKGEGITLAATRPVVVAP*WPFGNC
Trigger: ACAATTCCCAAAAGGCCACAAAGGGGCCACCACTAC...TGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS TCA 90 bp CCTGGGGCAAAGCCAGAGGCAGCATTCTCAGAAACCCATCTGCCATaGGCAGTGGCCCCTCAATGCCACCTACCCACTCAAACTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PGAKPEAAFSETHLP*AVAPQCHLPTQTCA
Trigger: AGCACAAGTTTGAGTGGGTAGGTGGCATTGAGGGGCCACTGCTCATGGCAGATGGGTTTCTGAGAATGCTGCCTCTGGCTTTGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553868.1
ENST00000554467.5
CDS GCA 90 bp GAAGAGCTCGCTGAGGCGCCAAAGCTAACGGGAGGGATCTACGCATaGGTAGTGGTGGCCCCTTTGTGGCCTTTTGGGAATTGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: EELAEAPKLTGGIYA*VVVAPLWPFGNCSS
Trigger: CGAACTACAATTCCCAAAAGGCCACAAAGGGGCCACCACTACGCATGCGTAGATCCCTCCCGTTAGCTTTGGCGCCTCAGCGAGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS-3UTR CAA 90 bp GTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACCCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: VYTLRETNHCLAQGNPTHPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...GTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328923.8
CDS-3UTR CAA 90 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: QATDVGHVCQQVCFDFITPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...TGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTACCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp ACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: TGPGRGKESNFESVGLISDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...GGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: PLMWAMSASRCALTSSHTDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: LLALKGTPQLPQERGRVSDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...AGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACAACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: QATDVGHVCQQVCFDFITTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...TGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: RLYLALALSERSSLPHQKISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: VVNEASIGAGASYDEPWPGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...CGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: VVNEASIGAGASYDEPWPPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...CGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp TGGATACAAGCTCTAGCACCCGCTCAGCCCGAGCTCCATCCAGGCCCTTGGGCCTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: WIQALAPAQPELHPGPWALSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...GGCCCAAGGGCCTGGATGGAGCTCGGGCTGAGCGGGTGCTAGAGCTTGTATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp TACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: YTLRETNHCLAQGNPTHSKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...ACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: FWEGRLYLALALSERSSLKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp ACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: TDVGHVCQQVCFDFITHLKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...GAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCAGGGGTGGTTCTGATTaGCTCCATTCACCGCACCGC +
Preference number: 5 (lower is better)
Translates to: PLMWAMSASRCALTSSHTRGGSD*LHSPHR
Trigger: GCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCT...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: CFDFITHLSHAGVVNEASDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: GAVYTLRETNHCLAQGNPASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: GPGRGKESNFESVGLISQASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp ATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: ITHLSHAGVVNEASIGAGASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...ACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCCTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGAGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: PCLLLALKGTPQLPQERGASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...TCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: YKFWEGRLYLALALSERSGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: GTPQLPQERGRVSDTVIMTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...CATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: CFDFITHLSHAGVVNEASTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AAGTCATCCTCACGGAACTGTCGAGAAGTTAAGGCTGGGGCCCCAAGCCGCAGGGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: KSSSRNCREVKAGAPSRRGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...CCTGCGGCTTGGGGCCCCAGCCTTAACTTCTCGACAGTTCCGTGAGGATGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCAGCTATGATGAGCCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: PAMMSRGRKSRAVSASWLGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...CAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCGTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATGAGGCCCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: PWPEKSSSQCQLVVVNEAPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...GGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: GPGRGKESNFESVGLISQWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp TGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGATGGATACAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: CDGTSVSRTGVLVGSDGYKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...GTATCCATCACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACAGCAGTGAAGCTCGGTaGCATCATCTGCAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: RPLMWAMSASRCALTSSHSSEAR*HHLQGS
Trigger: TGAGCCCTGCAGATGATGCAACCGAGCTTCACTGCT...GTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557348.5
CDS-3UTR CAA 90 bp ATGTCCGCGTGCTTGAAAGGCGAGGGAATCACCTTGGCAGCCACCAGGCCACTGACCACTCTGCAAAGCTaGTCCTCCAAAAGCCTATGT +
Preference number: 5 (lower is better)
Translates to: MSACLKGEGITLAATRPLTTLQS*SSKSLC
Trigger: ACATAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGT...CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGCACGCGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp CATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTTCTGGAGCCAAGCTaGAGATCAACGTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: HVCQQVCFDFITHLSHAGVLEPS*RSTSKG
Trigger: CCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAAC...GCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp CTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 5 (lower is better)
Translates to: LSHAGVVNEASIGAGASYSMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...ATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR CAA 90 bp AATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTGGCCGGAAAAGTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 5 (lower is better)
Translates to: NEASIGAGASYDEPWPEKSMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...CTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR CAA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGCCCCTTTGTGGCCTTTaGGGAATTGTAGTTCGCCCA +
Preference number: 5 (lower is better)
Translates to: GPGRGKESNFESVGLISQPLCGL*GIVVRP
Trigger: TGGGCGAACTACAATTCCCAAAAGGCCACAAAGGGG...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS TCA 90 bp CATTCACCGCACCGCACCTCAGAAATCTCCCACCACCTCACTCCATaGACCACTCTGCAAAGCTTGTCCTCCAAAAGCCTATGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: HSPHRTSEISHHLTP*TTLQSLSSKSLCLP
Trigger: GGGGAGACATAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAGTGAGGTGGTGGGAGATTTCTGAGGTGCGGTGCGGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS TCA 90 bp CCAGTTCTGGAGCCAAGCTTGAGATCAACGTCCAAGGGGTGGTTCTaGTTTGCTCCATTCACCGCACCGCACCTCAGAAATCTCCCACCA +
Preference number: 5 (lower is better)
Translates to: PVLEPSLRSTSKGWF*FAPFTAPHLRNLPP
Trigger: TGGTGGGAGATTTCTGAGGTGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS TCA 90 bp AGGACTCTCAACCATCAGCAAAGGACTGGGAAGTTCACTCCTCAATaGACACTGGGAAGGTACAGGTGGGTTCCCCCACTGGGAGCACCA +
Preference number: 5 (lower is better)
Translates to: RTLNHQQRTGKFTPQ*TLGRYRWVPPLGAP
Trigger: TGGTGCTCCCAGTGGGGGAACCCACCTGTACCTTCCCAGTGTTCATTGAGGAGTGAACTTCCCAGTCCTTTGCTGATGGTTGAGAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553868.1
ENST00000553950.5
ENST00000554467.5
ENST00000555213.1
CDS TCA 90 bp GTGGCCGGAAAAGTCGAGCAGTCAGTGCCAGCTGGTTGTAGTCAATaGGGCCAGTTTTGGGCTGGACAGACACACAAACAGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: VAGKVEQSVPAGCSQ*GQFWAGQTHKQLKP
Trigger: GGGCTTTAGCTGTTTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGACTACAACCAGCTGGCACTGACTGCTCGACTTTTCCGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS GCA 90 bp TCTGGAGCCAAGCTTGAGATCAACGTCCAAGGGGTGGTTCTGATTTaGTCCATTCACCGCACCGCACCTCAGAAATCTCCCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: SGAKLEINVQGVVLI*SIHRTAPQKSPTTS
Trigger: TGAGGTGGTGGGAGATTTCTGAGGTGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553837.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CATTTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: HFPGAFNAHQNQAWGRPWASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...CCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: QVPSMLIKTRHGEGPGKLASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...CAGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LLSYKFWEGRLYLALALSGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: YKFWEGRLYLALALSERSISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: LAQVGGRRVTLSLWASFPGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...GGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: WEGRLYLALALSERSSLPGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: AGVVNEASIGAGASYDEPTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...CGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGCTGGTGCCAGCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: HLSHAGVVNEASIGAGASTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...GCTGGCACCAGCGCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: LKGTPQLPQERGRVSDTVWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...CACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTATGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: VCQQVCFDFITHLSHAGVWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...TACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp TTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAATGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: FPGAFNAHQNQAWGRPWQWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...TTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCGCCCGGTGTGATGGCACTTCGGTCTCCAGGACAGGTGTTCTTGTTGGCAGTGTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PPGVMALRSPGQVFLLAVLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...CACTGCCAACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: TVIMTGVQTESAWALLLSKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AGACAAATCACTGTTTGGCCCAGGGGAACCCCACCCACAGTAATGGAAACTCAGGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACC +
Preference number: 5 (lower is better)
Translates to: RQITVWPRGTPPTVMETQETNHC*AQGNPT
Trigger: GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTC...CTGAGTTTCCATTACTGTGGGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp AAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTCTTGGGGTCGAGACAAATCACTGTTaGGCCCAGGGGAACCCCACC +
Preference number: 5 (lower is better)
Translates to: KVDSVLKCVRDLPASLGVETNHC*AQGNPT
Trigger: GGTGGGGTTCCCCTGGGCCAAACAGTGATTTGTCTC...GACCCCAAGACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp CATTTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGGCTCACTCACCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: HFPGAFNAHQNQAWGRPWAHSPV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGGTGAGTGAGC...CCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS GCA 90 bp ACCGCACCTCAGAAATCTCCCACCACCTCACTCCATGAACCACTCTaGAAAGCTTGTCCTCCAAAAGCCTATGTCTCCCCAACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TAPQKSPTTSLHEPL*KACPPKAYVSPTPE
Trigger: CTCTGGAGTTGGGGAGACATAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAGTGAGGTGGTGGGAGATTTCTGAGGTGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS GCA 90 bp ACAGCAGCTCAATTTCATCCACCACCTCTGCTCCCCCATAGTATCTaGCGTGGGAGAGGGGTAATGAGGGCACAGAGAAAGGACTCTCAA +
Preference number: 5 (lower is better)
Translates to: TAAQFHPPPLLPHSI*RGRGVMRAQRKDSQ
Trigger: TTGAGAGTCCTTTCTCTGTGCCCTCATTACCCCTCTCCCACGGCAGATACTATGGGGGAGCAGAGGTGGTGGATGAAATTGAGCTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553868.1
ENST00000553950.5
ENST00000554467.5
ENST00000555213.1
CDS-3UTR CAA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGATCCGGTCGTGAGGTaGCAGAAGGGCTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: TVIMTGVQTESAWALLLSDPVVR*QKGCVD
Trigger: GTCTACACAGCCCTTCTGCAACCTCACGACCGGATC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp TCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: SFNKLNLLRLLITSGVGSGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...AGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp TCTAAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCAGGCGAGGGAATCACCTaGGCAGCCACCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: SKPMLTPSSIKSTTLRKSGEGIT*AATRPL
Trigger: CAGTGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCC...TGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCAAACTGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: PGAFNAHQNQAWGRPWQTGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...AGTTTGCCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: RVSDTVIMTGVQTESAWAGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...GGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: PLMWAMSASRCALTSSHTPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: ALKGTPQLPQERGRVSDTPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...AGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CATTTCCCAGGTGCCTTCAATGCTCATCAAAACCAGGCATGGGGAAGGCCCTGGCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: HFPGAFNAHQNQAWGRPWPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...CCAGGGCCTTCCCCATGCCTGGTTTTGATGAGCATTGAAGGCACCTGGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: YKFWEGRLYLALALSERSKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CGGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: RSGVHIEGDKSLFGPGEPGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...GGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp TGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: WEGRLYLALALSERSSLPGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...CGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTAGCAGTGAAGCTCGGTaGCATCATCTGCAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SDTVIMTGVQTESAWALLSSEAR*HHLQGS
Trigger: TGAGCCCTGCAGATGATGCAACCGAGCTTCACTGCT...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414700.7
CDS-3UTR CAA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGTTCTGGAGCCAAGCTaGAGATCAACGTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: RLYLALALSERSSLPHQKVLEPS*RSTSKG
Trigger: CCCCTTGGACGTTGATCTCAAGCTTGGCTCCAGAAC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp GGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTCTCTCATGCGTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 5 (lower is better)
Translates to: GHVCQQVCFDFITHLSHASMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...CGCATGAGAGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR CAA 90 bp GCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 5 (lower is better)
Translates to: ATDVGHVCQQVCFDFITHSMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...GTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000554604.5
ENST00000555116.5
ENST00000555563.5
ENST00000555774.5
ENST00000557269.5
CDS-3UTR CAA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGCTGTCCAGCCCCTGTTaGCTTCCCCAGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LSYKFWEGRLYLALALSELSSPC*LPQSES
Trigger: AGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAG...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGCCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: RLYLALALSERSSLPHQKASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCATCTCCCGGCCAGTCTaGGGGTCCACAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAISRPV*GSTAFT
Trigger: GGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGAT...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: FWEGRLYLALALSERSSLGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...GAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TGCTTTGACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: CFDFITHLSHAGVVNEASGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...GCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp TTGGGCCGCAGGTCCACCAGCACCAGGTGGTTGTCAGTACCACCTGATACCAGTACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: LGRRSTSTRWLSVPPDTSTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...ACTGGTATCAGGTGGTACTGACAACCACCTGGTGCTGGTGGACCTGCGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp GGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GPGRGKESNFESVGLISQLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...CTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GACTTCATCACACACCTCTCTCATGCGGGCGTAGTCAATGAGGCGAGCATAGGCGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: DFITHLSHAGVVNEASIGGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...GCCTATGCTCGCCTCATTGACTACGCCCGCATGAGAGAGGTGTGTGATGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGGCCTCATTTCCCAGGTGGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: PGRGKESNFESVGLISQVGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...CACCTGGGAAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCCCCCTACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTAGGGGTGGTTCTGATTaGCTCCATTCACCGCACCGC +
Preference number: 5 (lower is better)
Translates to: YKFWEGRLYLALALSERSRGGSD*LHSPHR
Trigger: GCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAACTGTCCAGCCCCTGTTaGCTTCCCCAGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKLSSPC*LPQSES
Trigger: AGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAG...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTCTTGTTACCAAAAACCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: RGSNRKCLGPPSKSCYQKPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...TTTTTGGTAACAAGACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTCCCTCCGAGTACTTGTaGTTCAGACAGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLSYKFWEGRLYLALALSPSEYL*FRQDPR
Trigger: CCTGGGGTCCTGTCTGAACAACAAGTACTCGGAGGG...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTTCCCTCCCGCACCAAAAAGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: RLYLALALSERSSLPHQKGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...TTTTTGGTGCGGGAGGGAAGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCTCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: ATGSEGHSSTSPRKRTRLTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...GAGACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGCGTCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: LLLALKGTPQLPQERGRVTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...GACGCGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp CCACTGATGTGGGCCATGTCTGCCAGCAGGTGTGCTTTGACTTCATCACACACCTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PLMWAMSASRCALTSSHTLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...GGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACAAACTGCTCCACCCGTaGCCTGAGGTTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNKLLHP*PEVGQT
Trigger: CGTCTGGCCAACCTCAGGCAACGGGTGGAGCAGTTT...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTGATCAGAGACAGAAAGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: NLLRLLITSGVGSDQRQKGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...TTTCTGTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: TVIMTGVQTESAWALLLSGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTGCCTGCTACTGGCTCTGAAGGGCACTCCTCAACTTCCCCAAGAAAGAGGACGTTTAACAAATTGAATTaGCTGCGCCTGCTAATCACG +
Preference number: 5 (lower is better)
Translates to: LPATGSEGHSSTSPRKRTFNKLN*LRLLIT
Trigger: CGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAA...CGTCCTCTTTCTTGGGGAAGTTGAGGAGTGCCCTTCAGAGCCAGTAGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp GGAGCGGTGTACACATTGAGGGAGACAAATCACTGTTTGGCCCAGGGGAACCCCTTTAACAAATTGAATTaGCTGCGCCTGCTAATCACG +
Preference number: 5 (lower is better)
Translates to: GAVYTLRETNHCLAQGNPFNKLN*LRLLIT
Trigger: CGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAA...GGGGTTCCCCTGGGCCAAACAGTGATTTGTCTCCCTCAATGTGTACACCGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp TCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTACCACTCTGCAAAGCTaGTCCTCCAAAAGCCTATGT +
Preference number: 5 (lower is better)
Translates to: SDTVIMTGVQTESAWALLTTLQS*SSKSLC
Trigger: ACATAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGT...AAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS-3UTR CAA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: LSYKFWEGRLYLALALSEGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGGGACAGGTGTTCTTGTaGGCAGTGATGGATACAAGC +
Preference number: 5 (lower is better)
Translates to: LSYKFWEGRLYLALALSEGQVFL*AVMDTS
Trigger: GCTTGTATCCATCACTGCCAACAAGAACACCTGTCC...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: LSYKFWEGRLYLALALSEPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACATTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PQERGRVSDTVIMTGVQTLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...TGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GAACACGGCAAAGTTGATTCGGTCCTCAAATGTGTAAGGGATCTCCCGGCCAGTTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: EHGKVDSVLKCVRDLPASLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...ACTGGCCGGGAGATCCCTTACACATTTGAGGACCGAATCAACTTTGCCGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CAACTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: QLPQERGRVSDTVIMTGVLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...AACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTTCAATGAGGCCAGTTTaGGGCTGGACAGACACACAA +
Preference number: 5 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESSMRPV*GWTDTQ
Trigger: TTGTGTGTCTGTCCAGCCCAAAACTGGCCTCATTGA...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
CDS-3UTR CAA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCGCCAGCAGGTGTGCTTaGACTTCATCACACACCTCT +
Preference number: 5 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAASRCA*TSSHTS
Trigger: AGAGGTGTGTGATGAAGTCAAAGCACACCTGCTGGC...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTACGATGTCCGCGTGCTaGAAAGGCGAGGGAATCACC +
Preference number: 5 (lower is better)
Translates to: KKRSSQLQILGRETIPGSTMSAC*KGEGIT
Trigger: GGTGATTCCCTCGCCTTTCAAGCACGCGGACATCGT...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: KIFSVTNSGKGDYTWLLPGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...GGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: LLSYKFWEGRLYLALALSPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCTCACGCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: NVDPFIYKVHNSPEVILTPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...CGTGAGGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp AAGCCAATGTTGACCCCTTCATCTATAAAGTCCACAACTCTCCGGAAGTCATCCCCAGGACAGGTGTTCTaGTTGGCAGTGATGGATACA +
Preference number: 5 (lower is better)
Translates to: KPMLTPSSIKSTTLRKSSPGQVF*LAVMDT
Trigger: TGTATCCATCACTGCCAACAAGAACACCTGTCCTGG...GGATGACTTCCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
CDS-3UTR CAA 90 bp CTTCCCCAAGAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: LPQERGRVSDTVIMTGVQTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...TTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTCTTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCTGGAGCTTGGCAGTCTaGCTCTTCACCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAWSLAV*LFTSKP
Trigger: TGGCTTAGAGGTGAAGAGCAAGACTGCCAAGCTCCA...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp ACTGTGATCATGACAGGGGTTCAAACAGAAAGTGCCTGGGCCCTCCTTCTAAGTTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: TVIMTGVQTESAWALLLSLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...ACTTAGAAGGAGGGCCCAGGCACTTTCTGTTTGAACCCCTGTCATGATCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp AGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: RKAFYFTGPGRGKESNFEGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...CTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp GAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: ERLSISLAQVGGRRVTLSGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...ACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACTTTGAGTCTGTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RLSISLAQVGGRRVTLSLLSRKD*KSWSLA
Trigger: AGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...CAGACTCAAAGTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557529.1
CDS-3UTR CAA 90 bp ACAATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCCTGTCCAGCCCCTGTTaGCTTCCCCAGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: TISFNKLNLLRLLITSGVLSSPC*LPQSES
Trigger: AGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAG...GACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS-3UTR CAA 90 bp CTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LSYKFWEGRLYLALALSELSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...CTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp GAAAGAGGACGCGTCTCTGACACTGTGATCATGACAGGGGTTCAAACAGAAAGTTTAAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: ERGRVSDTVIMTGVQTESLSRKD*KSWSLA
Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTTAA...ACTTTCTGTTTGAACCCCTGTCATGATCACAGTGTCAGAGACGCGTCCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
CDS-3UTR CAA 90 bp TACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTGAGAGGTCTACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: YKFWEGRLYLALALSERSTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...AGACCTCTCACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCGGAAGGAGAGTAACTTaGAGTCTGTGGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: KDLLSYKFWEGRLYLALAGRRVT*SLWASF
Trigger: AAATGAGGCCCACAGACTCAAAGTTACTCTCCTTCC...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAGAAAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTGGGAACACGGCAAAGTaGATTCGGTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: KKRSSQLQILGRETIPGSGNTAK*IRSSNV
Trigger: CACATTTGAGGACCGAATCAACTTTGCCGTGTTCCC...AGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp CTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCCTAAGTACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: LLSYKFWEGRLYLALALSTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...ACTTAGGGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAAAATAGAAAGGCTTTCTATTTCACTGGCCCAGGTAGGGGGAAGGAGAGTAACACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: KNRKAFYFTGPGRGKESNTSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...GTTACTCTCCTTCCCCCTACCTGGGCCAGTGAAATAGAAAGCCTTTCTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557348.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp AAAGATCTTCTCAGTTACAAATTCTGGGAAGGGAGACTATACCTGGCTCTTGCCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAG +
Preference number: 5 (lower is better)
Translates to: KDLLSYKFWEGRLYLALATSKPM*TPSSIK
Trigger: CTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGT...GGCAAGAGCCAGGTATAGTCTCCCTTCCCAGAATTTGTAACTGAGAAGATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553837.5
ENST00000555116.5
ENST00000555774.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557529.1
CDS-3UTR CAA 90 bp TCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTTTTAACAAATTGAATTaGCTGCGCCTGCTAATCACG +
Preference number: 5 (lower is better)
Translates to: SFNKLNLLRLLITSGVGSFNKLN*LRLLIT
Trigger: CGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAA...AGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328923.8
ENST00000555774.5
ENST00000556825.5
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCCGAGCCG +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEAEP
Trigger: CGGCTCGGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000328923.8
ENST00000553324.5
ENST00000553950.5
ENST00000554467.5
ENST00000554600.5
ENST00000555563.5
ENST00000556689.5
ENST00000556825.5
ENST00000557433.5
ENST00000557487.5
ENST00000557740.5
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCCGTTCCA +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEAVP
Trigger: TGGAACGGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414700.7
ENST00000557302.1
ENST00000557348.5
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCCCAGTCA +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEAQS
Trigger: TGACTGGGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553474.5
ENST00000554656.5
ENST00000555116.5
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEAPS
Trigger: GGAAGGAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554310.5
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEAEG
Trigger: GCCTTCAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553949.1
ENST00000556737.1
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEAPP
Trigger: AGGTGGAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555774.5
CDS GCA 72 bp CCACCTCCTTCCAGCCCTCACTGCCGCCGGGACCCCTaGCTGATGCAAGCAGTGAAGCTCGGTTGCATCATC +
Preference number: 6 (lower is better)
Translates to: PPPSSPHCRRDP*LMQAVKLGCII
Trigger: GATGATGCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCAGTGAGGGCTGGAAGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414700.7
ENST00000553529.5
ENST00000557348.5
CDS GCA 72 bp GAGGCTCCTTCCAGCCCTCACTGCCGCCGGGACCCCTaGCTGATGCAAGCAGTGAAGCTCGGTTGCATCATC +
Preference number: 6 (lower is better)
Translates to: EAPSSPHCRRDP*LMQAVKLGCII
Trigger: GATGATGCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCAGTGAGGGCTGGAAGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554310.5
CDS CAA 90 bp CAGGATCACTGTCCGACAGGCTCTCCTGGCCTGTCCAGCCCCTGTTaGCTTCCCCAGTCTGAGTCTGGGCTGCGTTGCTGTGCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: QDHCPTGSPGLSSPC*LPQSESGLRCCAEP
Trigger: GGGCTCAGCACAGCAACGCAGCCCAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAGGCCAGGAGAGCCTGTCGGACAGTGATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553949.1
ENST00000553950.5
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555563.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557302.1
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
ENST00000557740.5
CDS CAA 90 bp TCACTGCCGCCGGGACCCCTGCCTGATGCAAGCAGTGAAGCTCGGTaGCATCATCTGCAGGGCTCAGAGCTGGCCGGAAAGGCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SLPPGPLPDASSEAR*HHLQGSELAGKAQL
Trigger: AAGCTGAGCCTTTCCGGCCAGCTCTGAGCCCTGCAGATGATGCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCGGCGGCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS TCA 72 bp AACCCCAGGTCTCACCAAGCCGCAGGCCGCCCGGTGTaGTGGCACTTCGGTCTCCAGGACAGGTGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: NPRSHQAAGRPV*WHFGLQDRCSC
Trigger: ACAAGAACACCTGTCCTGGAGACCGAAGTGCCATCACACCGGGCGGCCTGCGGCTTGGTGAGACCTGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556798.1
CDS GCA 72 bp CCAGCCCCTGTTTGCTTCCCCAGTCTGAGTCTGGGCTaGGTTGCTGTGCTGAGCCCGAATGGCCATCCTGAC +
Preference number: 6 (lower is better)
Translates to: PAPVCFPSLSLG*VAVLSPNGHPD
Trigger: GTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCCAGACTCAGACTGGGGAAGCAAACAGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553949.1
ENST00000553950.5
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555563.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557302.1
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
ENST00000557740.5
CDS GCA 72 bp CGGGACCCCTGCCTGATGCAAGCAGTGAAGCTCGGTTaGATCATCTGCAGGGCTCAGAGCTGGCCGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RDPCLMQAVKLG*IICRAQSWPER
Trigger: CCTTTCCGGCCAGCTCTGAGCCCTGCAGATGATGCAACCGAGCTTCACTGCTTGCATCAGGCAGGGGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414700.7
ENST00000557348.5
CDS CAA 90 bp AGGAAGCTGGCGGACCTGGGCCCCAAGGGCACAGCTCACGTGGGCTaGGTACACTGGATTCCAGTGGTAGAGGGAATCAGCCCCTCAATC +
Preference number: 6 (lower is better)
Translates to: RKLADLGPKGTAHVG*VHWIPVVEGISPSI
Trigger: GATTGAGGGGCTGATTCCCTCTACCACTGGAATCCAGTGTACCAAGCCCACGTGAGCTGTGCCCTTGGGGCCCAGGTCCGCCAGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS TCA 72 bp GACCGTTCGGAGAACGCATGCGCGAGAAGAGCTCGCTaGGGCGCCAAAGCTAACGGGAGGGATCTACGCATG +
Preference number: 6 (lower is better)
Translates to: DRSENACARRAR*GAKANGRDLRM
Trigger: CATGCGTAGATCCCTCCCGTTAGCTTTGGCGCCTCAGCGAGCTCTTCTCGCGCATGCGTTCTCCGAACGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEALA
Trigger: TGCTAAAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557427.5
CDS CCA 72 bp GCGAGCATAGGCGCTGGTGCCAGCTATGATGAGCCGTaGCCGGAAAAGTCGAGCAGTCAGTGCCAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: ASIGAGASYDEP*PEKSSSQCQVE
Trigger: CTCAACCTGGCACTGACTGCTCGACTTTTCCGGCCACGGCTCATCATAGCTGGCACCAGCGCCTATGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557487.5
CDS CCA 72 bp GAGCATAGCCCAAGGTCACCTGGCAGTCATCCAGCATaGGAGCCCCTTCCCTCCTCAAACCCCAGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: EHSPRSPGSHPA*EPLPSSNPRSH
Trigger: GTGAGACCTGGGGTTTGAGGAGGGAAGGGGCTCCCATGCTGGATGACTGCCAGGTGACCTTGGGCTATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556798.1
CDS TCA 72 bp TGCAGGGCTCAGAGCTGGCCGGAAAGGCTCAGCTTGTaGGACCAGGCCGAAAACTCCGCTCATTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: CRAQSWPERLSL*DQAENSAHLPA
Trigger: TGCTGGCAAATGAGCGGAGTTTTCGGCCTGGTCTCACAAGCTGAGCCTTTCCGGCCAGCTCTGAGCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414700.7
CDS TCA 72 bp GGGCTGCGTTGCTGTGCTGAGCCCGAATGGCCATCCTaGCCAGCTGCCCACATCTCTGCAGAGGCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: GLRCCAEPEWPS*PAAHISAEASK
Trigger: TTTTGAAGCCTCTGCAGAGATGTGGGCAGCTGGTCAGGATGGCCATTCGGGCTCAGCACAGCAACGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449049.7
ENST00000553837.5
CDS GCA 72 bp AGCTCCAGGCCACGACACTGCCTGTCCTTCTCCCTCTaGAGCAACTCCCACATCTCAGGATCACTGTCCGAC +
Preference number: 6 (lower is better)
Translates to: SSRPRHCLSFSL*SNSHISGSLSD
Trigger: GTCGGACAGTGATCCTGAGATGTGGGAGTTGCTGCAGAGGGAGAAGGACAGGCAGTGTCGTGGCCTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553949.1
ENST00000553950.5
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555563.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557302.1
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
CDS GCA 72 bp TCAGAACCTGCAGGGAGTACTCCCGGAACATGGGGGTaGAGGCCTGGAGATGAGACAGTAGCAGCTGTCACC +
Preference number: 6 (lower is better)
Translates to: SEPAGSTPGTWG*RPGDETVAAVT
Trigger: GGTGACAGCTGCTACTGTCTCATCTCCAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 72 bp GCAGGATCCAGGTCAAAGGCTTCCAAGGCCCGGCGCTaGCACAGCAGCTCAATTTCATCCACCACCTCTGCT +
Preference number: 6 (lower is better)
Translates to: AGSRSKASKARR*HSSSISSTTSA
Trigger: AGCAGAGGTGGTGGATGAAATTGAGCTGCTGTGCCAGCGCCGGGCCTTGGAAGCCTTTGACCTGGATCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 31 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553324.5
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000553868.1
ENST00000553949.1
ENST00000554310.5
ENST00000554467.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555116.5
ENST00000555213.1
ENST00000555563.5
ENST00000555634.5
ENST00000555773.5
ENST00000555774.5
ENST00000556689.5
ENST00000556737.1
ENST00000556825.5
ENST00000557269.5
ENST00000557348.5
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
ENST00000557740.5
CDS CCA 72 bp GGCCCCAAGGGCACAGCTCACGTGGGCTTGGTACACTaGATTCCAGTGGTAGAGGGAATCAGCCCCTCAATC +
Preference number: 6 (lower is better)
Translates to: GPKGTAHVGLVH*IPVVEGISPSI
Trigger: GATTGAGGGGCTGATTCCCTCTACCACTGGAATCCAGTGTACCAAGCCCACGTGAGCTGTGCCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CAA 90 bp TACCCTCTGGCCCTGCACCCTCAGCATAGCTCTGTGACCCCAGCCTaGACTCCTTCCATCCTGGCATTTCCCTTCCATCAGCCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: YPLALHPQHSSVTPA*TPSILAFPFHQPQH
Trigger: ATGCTGGGGCTGATGGAAGGGAAATGCCAGGATGGAAGGAGTCAAGGCTGGGGTCACAGAGCTATGCTGAGGGTGCAGGGCCAGAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS TCA 72 bp CTCAGGGAGCCTGACCTGGCCCCTCGAAGAGTCTTGTaGGTAGTGGTGGTGACGATGTCCGCGTGCTTGAAA +
Preference number: 6 (lower is better)
Translates to: LREPDLAPRRVL*VVVVTMSACLK
Trigger: TTTCAAGCACGCGGACATCGTCACCACCACTACTCACAAGACTCTTCGAGGGGCCAGGTCAGGCTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS TCA 72 bp TGGGGTCCACAGCCTTCACCCCTTTCCGGTAGAAGATaGGCCCTGACCTGTGTGAGAGGTGGATGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: WGPQPSPLSGRR*ALTCVRGGWSE
Trigger: CTCTGACCATCCACCTCTCACACAGGTCAGGGCTCATCTTCTACCGGAAAGGGGTGAAGGCTGTGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS GCA 72 bp GCTGAGGCGCCAAAGCTAACGGGAGGGATCTACGCATaGGTAGTGGTGGCCCCTTTGTGGCCTTTTGGGAAT +
Preference number: 6 (lower is better)
Translates to: AEAPKLTGGIYA*VVVAPLWPFGN
Trigger: ATTCCCAAAAGGCCACAAAGGGGCCACCACTACGCATGCGTAGATCCCTCCCGTTAGCTTTGGCGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS GCA 72 bp TCTCTGCAGAGGCTGATGCAAGCAGTGAAGCTCGGTTaGATCATCTGCAGGGCTCAGAGCTGGCCGGAAAGG +
Preference number: 6 (lower is better)
Translates to: SLQRLMQAVKLG*IICRAQSWPER
Trigger: CCTTTCCGGCCAGCTCTGAGCCCTGCAGATGATGCAACCGAGCTTCACTGCTTGCATCAGCCTCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557703.5
CDS CCA 72 bp GGAGGGATCTACGCATGCGTAGTGGTGGCCCCTTTGTaGCCTTTTGGGAATTGTAGTTCGCCCACTCACCGC +
Preference number: 6 (lower is better)
Translates to: GGIYACVVVAPL*PFGNCSSPTHR
Trigger: GCGGTGAGTGGGCGAACTACAATTCCCAAAAGGCCACAAAGGGGCCACCACTACGCATGCGTAGATCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS CCA 72 bp CAACTCGGAAGTCGCAGGAGGTCCAGCCACCAACTCTaGTCTAGGGCAGCAAGCTGTCGGAAGAAGACCGTT +
Preference number: 6 (lower is better)
Translates to: QLGSRRRSSHQL*SRAASCRKKTV
Trigger: AACGGTCTTCTTCCGACAGCTTGCTGCCCTAGACCAGAGTTGGTGGCTGGACCTCCTGCGACTTCCGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554600.5
ENST00000556825.5
ENST00000557740.5
CDS CAA 72 bp GCCCTGCACCCTCAGCATAGCTCTGTGACCCCAGCCTaGACTCCTTCCATCCTGGCATTTCCCTTCCATCAG +
Preference number: 6 (lower is better)
Translates to: ALHPQHSSVTPA*TPSILAFPFHQ
Trigger: CTGATGGAAGGGAAATGCCAGGATGGAAGGAGTCAAGGCTGGGGTCACAGAGCTATGCTGAGGGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS GCA 72 bp CTTGGCAGCCACCAGGCCACTGATGTGGGCCATGTCTaGCAGCAGGTGTGCTTTGACTTCATCACACACGTT +
Preference number: 6 (lower is better)
Translates to: LGSHQATDVGHV*QQVCFDFITHV
Trigger: AACGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556689.5
CDS GCA 72 bp GCGCTGGCACAGCAGCTCAATTTCATCCACCACCTCTaGTCCCCCATAGTATCCGAGCCGCCCAAAACAAAG +
Preference number: 6 (lower is better)
Translates to: ALAQQLNFIHHL*SPIVSEPPKTK
Trigger: CTTTGTTTTGGGCGGCTCGGATACTATGGGGGAGCAGAGGTGGTGGATGAAATTGAGCTGCTGTGCCAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555634.5
ENST00000557269.5
CDS CCA 72 bp CATTCTTCAGAACCTGCAGGGAGTACTCCCGGAACATaGGGGTGCAGGCCTGGAGATGAGACAGTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: HSSEPAGSTPGT*GCRPGDETVAA
Trigger: AGCTGCTACTGTCTCATCTCCAGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTTCTGAAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554467.5
CDS CCA 72 bp CAAGGGCTGAGGCCACAGATTGTAGAGCAATGCAGGTaGGAGGGGAGACCTTTAGCAGTCCGTGAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: QGLRPQIVEQCR*EGRPLAVREEE
Trigger: CTCTTCCTCACGGACTGCTAAAGGTCTCCCCTCCCACCTGCATTGCTCTACAATCTGTGGCCTCAGCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554656.5
CDS CAA 72 bp ACGGGAGGGATCTACGCATGCGTAGTGGTGGCCCCTTaGTGGCCTTTTGGGAATTGTAGTTCGCCCACTCAC +
Preference number: 6 (lower is better)
Translates to: TGGIYACVVVAP*WPFGNCSSPTH
Trigger: GTGAGTGGGCGAACTACAATTCCCAAAAGGCCACAAAGGGGCCACCACTACGCATGCGTAGATCCCTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556825.5
CDS GCA 72 bp GCGCTGGCACAGCAGCTCAATTTCATCCACCACCTCTaGTCCCCCATAGTATCTCTTGCCAGGATAACCCTC +
Preference number: 6 (lower is better)
Translates to: ALAQQLNFIHHL*SPIVSLARITL
Trigger: GAGGGTTATCCTGGCAAGAGATACTATGGGGGAGCAGAGGTGGTGGATGAAATTGAGCTGCTGTGCCAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000328923.8
ENST00000414700.7
ENST00000449049.7
ENST00000553474.5
ENST00000553529.5
ENST00000553837.5
ENST00000554310.5
ENST00000554600.5
ENST00000554604.5
ENST00000554656.5
ENST00000554975.5
ENST00000555773.5
ENST00000556689.5
ENST00000556737.1
ENST00000557427.5
ENST00000557433.5
ENST00000557487.5
ENST00000557703.5
ENST00000557740.5
CDS GCA 72 bp CAATTTCATCCACCACCTCTGCTCCCCCATAGTATCTaGCGTGGGAGAGGGGTAATGAGGGCACAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: QFHPPPLLPHSI*RGRGVMRAQRK
Trigger: CTTTCTCTGTGCCCTCATTACCCCTCTCCCACGGCAGATACTATGGGGGAGCAGAGGTGGTGGATGAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553868.1
ENST00000553950.5
ENST00000554467.5
ENST00000555213.1
CDS GCA 72 bp CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTaGTTTGACTTCATCACACACGTTGAGCTTATAGGG +
Preference number: 6 (lower is better)
Translates to: QATDVGHVCQQV*FDFITHVELIG
Trigger: CCCTATAAGCTCAACGTGTGTGATGAAGTCAAAGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556689.5
CDS CCA 72 bp AGGCAGCATTCTCAGAAACCCATCTGCCATGAGCAGTaGCCCCTCAATGCCACCTACCCACTCAAACTTGTG +
Preference number: 6 (lower is better)
Translates to: RQHSQKPICHEQ*PLNATYPLKLV
Trigger: CACAAGTTTGAGTGGGTAGGTGGCATTGAGGGGCCACTGCTCATGGCAGATGGGTTTCTGAGAATGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553868.1
ENST00000554467.5
CDS TCA 72 bp CACCGCACCTCAGAAATCTCCCACCACCTCACTCCATaGACCACTCTGCAAAGCTTGTCCTCCAAAAGCCTA +
Preference number: 6 (lower is better)
Translates to: HRTSEISHHLTP*TTLQSLSSKSL
Trigger: TAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAGTGAGGTGGTGGGAGATTTCTGAGGTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS TCA 72 bp GAGCCAAGCTTGAGATCAACGTCCAAGGGGTGGTTCTaGTTTGCTCCATTCACCGCACCGCACCTCAGAAAT +
Preference number: 6 (lower is better)
Translates to: EPSLRSTSKGWF*FAPFTAPHLRN
Trigger: ATTTCTGAGGTGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCTTGGACGTTGATCTCAAGCTTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS GCA 72 bp AAGCTTGAGATCAACGTCCAAGGGGTGGTTCTGATTTaGTCCATTCACCGCACCGCACCTCAGAAATCTCCC +
Preference number: 6 (lower is better)
Translates to: KLEINVQGVVLI*SIHRTAPQKSP
Trigger: GGGAGATTTCTGAGGTGCGGTGCGGTGAATGGAGCAAATCAGAACCACCCCTTGGACGTTGATCTCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS GCA 72 bp CAGAAATCTCCCACCACCTCACTCCATGAACCACTCTaGAAAGCTTGTCCTCCAAAAGCCTATGTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: QKSPTTSLHEPL*KACPPKAYVSP
Trigger: TGGGGAGACATAGGCTTTTGGAGGACAAGCTTTGCAGAGTGGTTCATGGAGTGAGGTGGTGGGAGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449049.7
ENST00000553837.5
ENST00000555774.5
CDS CCA 72 bp GCACAGAGAAAGGACTCTCAACCATCAGCAAAGGACTaGGAAGTTCACTCCTCAATGAACACTGGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: AQRKDSQPSAKD*EVHSSMNTGKV
Trigger: TACCTTCCCAGTGTTCATTGAGGAGTGAACTTCCCAGTCCTTTGCTGATGGTTGAGAGTCCTTTCTCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553868.1
ENST00000553950.5
ENST00000554467.5
ENST00000555213.1
CDS CAA 72 bp CACTCACCAGTCTTGCTCTTCACCTCTAAGCCAATGTaGACCCCTTCATCTATAAAGTCCACAACTCTCCGG +
Preference number: 6 (lower is better)
Translates to: HSPVLLFTSKPM*TPSSIKSTTLR
Trigger: CCGGAGAGTTGTGGACTTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAGCAAGACTGGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554467.5
ENST00000556798.1
ENST00000557529.1