Pregenerated sensors for SHMT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176974Ensembl transcript IDs: ENST00000316694.8, ENST00000352886.10, ENST00000354098.7, ENST00000395682.3, ENST00000395684.5, ENST00000579558.5, ENST00000580002.5, ENST00000582352.1, ENST00000582653.1, ENST00000618902.1, ENST00000640392.2, ENST00000644141.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCTCTGTGGCGCCAGGTaGGTCCAGAGTGGGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: PPQRARVSTVPLWSSSSILCGAR*VQSGPA Trigger: AGCGGGCCCACTCTGGACCCACCTGGCGCCACAGAG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCTCTGTGGCGCCAGGTaGGTCCAGAGTGGGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: KPPQRARVSTVPLWSSSSLCGAR*VQSGPA Trigger: AGCGGGCCCACTCTGGACCCACCTGGCGCCACAGAG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCTGTGGCGCCAGGTaGGTCCAGAGTGGGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHLCGAR*VQSGPA Trigger: AGCGGGCCCACTCTGGACCCACCTGGCGCCACAGAG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCAGTCCCAGACCCGCTaGCCCAACGCCCCGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIQSQTR*PNAPRT Trigger: GGTGCGCGGGGCGTTGGGTCAGCGGGTCTGGGACTG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCAGTCCCAGACCCGCTaGCCCAACGCCCCGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSQSQTR*PNAPRT Trigger: GGTGCGCGGGGCGTTGGGTCAGCGGGTCTGGGACTG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCAGTCCCAGACCCGCTaGCCCAACGCCCCGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHQSQTR*PNAPRT Trigger: GGTGCGCGGGGCGTTGGGTCAGCGGGTCTGGGACTG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCGCCACCAGCCCGCTaGTGTGAGCCATGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPPPAR*CEPCPP Trigger: TGGCGGACATGGCTCACATCAGCGGGCTGGTGGCGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCGCCACCAGCCCGCTaGTGTGAGCCATGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPPPAR*CEPCPP Trigger: TGGCGGACATGGCTCACATCAGCGGGCTGGTGGCGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTTGCAGGGGAGCCTCTaGCCCGGGTACCCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSILQGSL*PGYPSE Trigger: CTCTGAGGGGTACCCGGGCCAGAGGCTCCCCTGCAA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000352886.10 ENST00000580002.5 |
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| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCCTCCCGGAGAGCCTaGACGGCCGCCTGGTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISSRRA*TAAWYL Trigger: TAAGTACCAGGCGGCCGTGCAGGCTCTCCGGGAGGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCCCGAACTTGGCGCTaGACCGCTCGAGCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPRTWR*TARAQE Trigger: TTCCTGAGCTCGAGCGGTCCAGCGCCAAGTTCGGGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCCAAACCCCGAACTTaGCGCTGGACCGCTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPKPRT*RWTARA Trigger: AGCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCAACCCATGGGTCAGGTaGCCCCCATCCGGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSINPWVR*PPSGRS Trigger: GGACCTTCCGGATGGGGGCCACCTGACCCATGGGTT...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGCCTGCACGGCCGCCTaGTACTTATCCCCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIACTAA*YLSPAS Trigger: ACTGGCAGGGGATAAGTACCAGGCGGCCGTGCAGGC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCATCCATCTCTCAGGTaGGGGTCCTCCGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIHPSLR*GSSGRQ Trigger: CTGCCTGCCGGAGGACCCCCACCTGAGAGATGGATG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTTGCAGGGGAGCCTCTaGCCCGGGTACCCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHLQGSL*PGYPSE Trigger: CTCTGAGGGGTACCCGGGCCAGAGGCTCCCCTGCAA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000352886.10 ENST00000580002.5 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGTTTGCAGGGGAGCCTaGGTAGGGCTGGACGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIVCRGA*VGLDVD Trigger: GTCAACGTCCAGCCCTACTCAGGCTCCCCTGCAAAC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000354098.7 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCACCAGCCCGCTGATGTaGGCCATGTCCGCCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSITSPLM*AMSAMR Trigger: TCTCATGGCGGACATGGCTCACATCAGCGGGCTGGT...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCTCGCAGGGTCTTGTaGGTGGTGGTGGTCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPRRVL*VVVVTT Trigger: TGTGGTGACCACCACCACTCACAAGACCCTGCGAGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCGAGCTCAGGAAGGTaGACTCTGCGCGCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISSSGR*TLRARL Trigger: AAGCCTGGCGCGCAGAGTGCACCTTCCTGAGCTCGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCCTCCCGGAGAGCCTaGACGGCCGCCTGGTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSSRRA*TAAWYL Trigger: TAAGTACCAGGCGGCCGTGCAGGCTCTCCGGGAGGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCCTCCCGGAGAGCCTaGACGGCCGCCTGGTACTTA | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSSRRA*TAAWYL Trigger: TAAGTACCAGGCGGCCGTGCAGGCTCTCCGGGAGGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCAGGAAGGTGCACTCTaGGCGCCAGGCTTGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHQEGAL*APGLGL Trigger: CAAGCCCAAGCCTGGCGCGCAGAGTGCACCTTCCTG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000352886.10 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCCGAACTTGGCGCTaGACCGCTCGAGCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPRTWR*TARAQE Trigger: TTCCTGAGCTCGAGCGGTCCAGCGCCAAGTTCGGGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCCCAAACCCCGAACTTaGCGCTGGACCGCTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSPKPRT*RWTARA Trigger: AGCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCAAACCCCGAACTTaGCGCTGGACCGCTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPKPRT*RWTARA Trigger: AGCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCAACCCATGGGTCAGGTaGCCCCCATCCGGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSNPWVR*PPSGRS Trigger: GGACCTTCCGGATGGGGGCCACCTGACCCATGGGTT...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATAACCCATGGGTCAGGTaGCCCCCATCCGGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHNPWVR*PPSGRS Trigger: GGACCTTCCGGATGGGGGCCACCTGACCCATGGGTT...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGCCTGCACGGCCGCCTaGTACTTATCCCCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHACTAA*YLSPAS Trigger: ACTGGCAGGGGATAAGTACCAGGCGGCCGTGCAGGC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGCCTGCACGGCCGCCTaGTACTTATCCCCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSACTAA*YLSPAS Trigger: ACTGGCAGGGGATAAGTACCAGGCGGCCGTGCAGGC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCATCCATCTCTCAGGTaGGGGTCCTCCGGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHHPSLR*GSSGRQ Trigger: CTGCCTGCCGGAGGACCCCCACCTGAGAGATGGATG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCATCCATCTCTCAGGTaGGGGTCCTCCGGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSHPSLR*GSSGRQ Trigger: CTGCCTGCCGGAGGACCCCCACCTGAGAGATGGATG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGTTTGCAGGGGAGCCTaGGTAGGGCTGGACGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSVCRGA*VGLDVD Trigger: GTCAACGTCCAGCCCTACTCAGGCTCCCCTGCAAAC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000354098.7 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGAGCCATGTCCGCCATaGGATACGCCCCGTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIEPCPP*DTPRSH Trigger: ATGAGAACGGGGCGTATCTCATGGCGGACATGGCTC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCACCAGCCCGCTGATGTaGGCCATGTCCGCCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSTSPLM*AMSAMR Trigger: TCTCATGGCGGACATGGCTCACATCAGCGGGCTGGT...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCTCGCAGGGTCTTGTaGGTGGTGGTGGTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPRRVL*VVVVTT Trigger: TGTGGTGACCACCACCACTCACAAGACCCTGCGAGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCCTCGCAGGGTCTTGTaGGTGGTGGTGGTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSPRRVL*VVVVTT Trigger: TGTGGTGACCACCACCACTCACAAGACCCTGCGAGG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCGAGCTCAGGAAGGTaGACTCTGCGCGCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSSSGR*TLRARL Trigger: AAGCCTGGCGCGCAGAGTGCACCTTCCTGAGCTCGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGTGGGCCCCGTTGACTaGCATCGTCATTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIVGPVD*HRHCTG Trigger: ACCAGTGCAATGACGATGCCAGTCAACGGGGCCCAC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGCAGGGTCTTGTGAGTaGTGGTGGTCACCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIAGSCE*WWSPHG Trigger: GCCATGTGGTGACCACCACCACTCACAAGACCCTGC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGAGCCATGTCCGCCATaGGATACGCCCCGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHEPCPP*DTPRSH Trigger: ATGAGAACGGGGCGTATCTCATGGCGGACATGGCTC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGAGCCATGTCCGCCATaGGATACGCCCCGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSEPCPP*DTPRSH Trigger: ATGAGAACGGGGCGTATCTCATGGCGGACATGGCTC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGTAGCAGCTGGTTCCTaGGATGATCAGCTTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIVAAGS*DDQLRV Trigger: CACCCGAAGCTGATCATCGCAGGAACCAGCTGCTAC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCCTGTAGAAGATCATaGCAGCTCGGCAGCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISCRRS*QLGSLA Trigger: TGCGAGGCTGCCGAGCTGGCATGATCTTCTACAGGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGTACACAGCAAAGTTTaGAGGGGAGCCTCTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHVHSKV*RGASGP Trigger: CGGGCCAGAGGCTCCCCTGCAAACTTTGCTGTGTAC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000352886.10 ENST00000580002.5 |
||
| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGTACACAGCAAAGTTTaGAGGGGAGCCTCTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSVHSKV*RGASGP Trigger: CGGGCCAGAGGCTCCCCTGCAAACTTTGCTGTGTAC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000352886.10 ENST00000580002.5 |
||
| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGTGGGCCCCGTTGACTaGCATCGTCATTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSVGPVD*HRHCTG Trigger: ACCAGTGCAATGACGATGCCAGTCAACGGGGCCCAC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGTGGGCCCCGTTGACTaGCATCGTCATTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHVGPVD*HRHCTG Trigger: ACCAGTGCAATGACGATGCCAGTCAACGGGGCCCAC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGGGTCTTGTGAGTGGTaGTGGTCACCACATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIGSCEW*WSPHGS Trigger: ACTGCCATGTGGTGACCACCACCACTCACAAGACCC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGCAGGGTCTTGTGAGTaGTGGTGGTCACCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHAGSCE*WWSPHG Trigger: GCCATGTGGTGACCACCACCACTCACAAGACCCTGC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGCAGGGTCTTGTGAGTaGTGGTGGTCACCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSAGSCE*WWSPHG Trigger: GCCATGTGGTGACCACCACCACTCACAAGACCCTGC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCACAGAGCCCTGCAGTTaGCCACCACCTGGTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSITEPCS*PPPGVD Trigger: ATCAACACCAGGTGGTGGCCAACTGCAGGGCTCTGT...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTGGGACTTCCCAGGATaGAGGGAGGAGGCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIWDFPG*REEAIS Trigger: AGAAATGGCCTCCTCCCTCCATCCTGGGAAGTCCCA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGACTGGCATCGTCATTaGACTGGTTCGAAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIDWHRH*TGSKLP Trigger: AGGCAGCTTCGAACCAGTGCAATGACGATGCCAGTC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGTAGCAGCTGGTTCCTaGGATGATCAGCTTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSVAAGS*DDQLRV Trigger: CACCCGAAGCTGATCATCGCAGGAACCAGCTGCTAC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGTAGCAGCTGGTTCCTaGGATGATCAGCTTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHVAAGS*DDQLRV Trigger: CACCCGAAGCTGATCATCGCAGGAACCAGCTGCTAC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCCTGTAGAAGATCATaGCAGCTCGGCAGCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSCRRS*QLGSLA Trigger: TGCGAGGCTGCCGAGCTGGCATGATCTTCTACAGGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCCTGTAGAAGATCATaGCAGCTCGGCAGCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSCRRS*QLGSLA Trigger: TGCGAGGCTGCCGAGCTGGCATGATCTTCTACAGGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCCTTCCACCATCTGTaGCTTTGGAACGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPFHHL*LWNGDP Trigger: TGGATCTCCGTTCCAAAGGCACAGATGGTGGAAGGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGTGGTGGTCACCACATaGCAGTGTTCAAATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIVVVTT*QCSNGE Trigger: CTCCCCATTTGAACACTGCCATGTGGTGACCACCAC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGGGTCTTGTGAGTGGTaGTGGTCACCACATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHGSCEW*WSPHGS Trigger: ACTGCCATGTGGTGACCACCACCACTCACAAGACCC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGGGTCTTGTGAGTGGTaGTGGTCACCACATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSGSCEW*WSPHGS Trigger: ACTGCCATGTGGTGACCACCACCACTCACAAGACCC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCACAGAGCCCTGCAGTTaGCCACCACCTGGTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSTEPCS*PPPGVD Trigger: ATCAACACCAGGTGGTGGCCAACTGCAGGGCTCTGT...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATACAGAGCCCTGCAGTTaGCCACCACCTGGTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHTEPCS*PPPGVD Trigger: ATCAACACCAGGTGGTGGCCAACTGCAGGGCTCTGT...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTGGGACTTCCCAGGATaGAGGGAGGAGGCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSWDFPG*REEAIS Trigger: AGAAATGGCCTCCTCCCTCCATCCTGGGAAGTCCCA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTGGGACTTCCCAGGATaGAGGGAGGAGGCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHWDFPG*REEAIS Trigger: AGAAATGGCCTCCTCCCTCCATCCTGGGAAGTCCCA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCAACATCACTGTCTTTaGGGGGTTGTGCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSIQHHCL*GVVPAS Trigger: AGATGCTGGCACAACCCCTCAAAGACAGTGATGTTG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGACTGGCATCGTCATTaGACTGGTTCGAAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHDWHRH*TGSKLP Trigger: AGGCAGCTTCGAACCAGTGCAATGACGATGCCAGTC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGACTGGCATCGTCATTaGACTGGTTCGAAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSDWHRH*TGSKLP Trigger: AGGCAGCTTCGAACCAGTGCAATGACGATGCCAGTC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCCCTTCCACCATCTGTaGCTTTGGAACGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSPFHHL*LWNGDP Trigger: TGGATCTCCGTTCCAAAGGCACAGATGGTGGAAGGG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCTTCCACCATCTGTaGCTTTGGAACGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPFHHL*LWNGDP Trigger: TGGATCTCCGTTCCAAAGGCACAGATGGTGGAAGGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGTGGTGGTCACCACATaGCAGTGTTCAAATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSVVVTT*QCSNGE Trigger: CTCCCCATTTGAACACTGCCATGTGGTGACCACCAC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGTGGTGGTCACCACATaGCAGTGTTCAAATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHVVVTT*QCSNGE Trigger: CTCCCCATTTGAACACTGCCATGTGGTGACCACCAC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCTTGTGAGTGGTGGTaGTCACCACATGGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISCEWW*SPHGSV Trigger: AACACTGCCATGTGGTGACCACCACCACTCACAAGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCAACATCACTGTCTTTaGGGGGTTGTGCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSQHHCL*GVVPAS Trigger: AGATGCTGGCACAACCCCTCAAAGACAGTGATGTTG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTGTCAGAACCACCTGTaGCTATTTTGTAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSICQNHL*LFCSPA Trigger: AGCTGGGCTACAAAATAGTCACAGGTGGTTCTGACA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCCAATCCAACCCTCTaGCGGTTACTCTCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISNPTL*RLLSFL Trigger: TAAGAAGGAGAGTAACCGGCAGAGGGTTGGATTGGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCTTGTGAGTGGTGGTaGTCACCACATGGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSCEWW*SPHGSV Trigger: AACACTGCCATGTGGTGACCACCACCACTCACAAGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCTTGTGAGTGGTGGTaGTCACCACATGGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSCEWW*SPHGSV Trigger: AACACTGCCATGTGGTGACCACCACCACTCACAAGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCAACAGTTCCCCTTTaGAGCAGCTCATCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISTVPL*SSSSIS Trigger: AGAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTGTCAGAACCACCTGTaGCTATTTTGTAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSCQNHL*LFCSPA Trigger: AGCTGGGCTACAAAATAGTCACAGGTGGTTCTGACA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR TCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTGTCAGAACCACCTGTaGCTATTTTGTAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHCQNHL*LFCSPA Trigger: AGCTGGGCTACAAAATAGTCACAGGTGGTTCTGACA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCCAATCCAACCCTCTaGCGGTTACTCTCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSNPTL*RLLSFL Trigger: TAAGAAGGAGAGTAACCGGCAGAGGGTTGGATTGGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCCAATCCAACCCTCTaGCGGTTACTCTCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSNPTL*RLLSFL Trigger: TAAGAAGGAGAGTAACCGGCAGAGGGTTGGATTGGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCTCCACAAGGATCAAATaGTTGTCAGAACCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPQRARVSTVPLWSSSSISTRIK*LSEPPV Trigger: CACAGGTGGTTCTGACAACCATTTGATCCTTGTGGA...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCAACAGTTCCCCTTTaGAGCAGCTCATCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSTVPL*SSSSIS Trigger: AGAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCAACAGTTCCCCTTTaGAGCAGCTCATCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSTVPL*SSSSIS Trigger: AGAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCCACAAGGATCAAATaGTTGTCAGAACCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSTRIK*LSEPPV Trigger: CACAGGTGGTTCTGACAACCATTTGATCCTTGTGGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCCACAAGGATCAAATaGTTGTCAGAACCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSTRIK*LSEPPV Trigger: CACAGGTGGTTCTGACAACCATTTGATCCTTGTGGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS CCA 90 bp | AAAGGCCACGGGCCGCCACCCCATCATACCGAATGTGCCTGGAACTaGGGCGCTGCGGCTGGCCGCCGCCCGATCCCCAGCCCAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: KGHGPPPHHTECAWN*GAAAGRRPIPSPGA Trigger: CGCGCCTGGGCTGGGGATCGGGCGGCGGCCAGCCGCAGCGCCCCAGTTCCAGGCACATTCGGTATGATGGGGTGGCGGCCCGTGGCCTTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
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| CDS CCA 90 bp | GGGGGAGGCTTTCCAGTTGGAGGCGAGGCTGACCTCCTCCCAAGGTaGGCCCATCATTGCAGCTGCAGCAGCAGAGCCTGGGCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGFPVGGEADLLPR*AHHCSCSSRAWATS Trigger: GGATGTGGCCCAGGCTCTGCTGCTGCAGCTGCAATGATGGGCCCACCTTGGGAGGAGGTCAGCCTCGCCTCCAACTGGAAAGCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CCA 90 bp | ACCACTATTCCCATCATCTGTGGCTCACCCAAGGGGGCGGCTGGCTaGTCTGAGGCAGGGGGAGGCTTTCCAGTTGGAGGCGAGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTIPIICGSPKGAAG*SEAGGGFPVGGEAD Trigger: GTCAGCCTCGCCTCCAACTGGAAAGCCTCCCCCTGCCTCAGACCAGCCAGCCGCCCCCTTGGGTGAGCCACAGATGATGGGAATAGTGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS-3UTR CAA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCCCAAACCCCGAACTaGGCGCTGGACCGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPQTPN*ALDRSS Trigger: GCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS GCA 90 bp | CCAGTTGGAGGCGAGGCTGACCTCCTCCCAAGGTGGGCCCATCATTaGAGCTGCAGCAGCAGAGCCTGGGCCACATCCTGGTTGCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVGGEADLLPRWAHH*SCSSRAWATSWLHK Trigger: TTTGTGCAACCAGGATGTGGCCCAGGCTCTGCTGCTGCAGCTGCAATGATGGGCCCACCTTGGGAGGAGGTCAGCCTCGCCTCCAACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS-3UTR CAA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCCCCAAACCCCGAACTaGGCGCTGGACCGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPPQRARVSTVPLWSSSSPQTPN*ALDRSS Trigger: GCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGGG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCCAAACCCCGAACTaGGCGCTGGACCGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPQTPN*ALDRSS Trigger: GCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000640392.2 ENST00000644141.2 |
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| CDS GCA 90 bp | GCCTTGGGTGCTGACAGCACTGGGGCCTCTGCTTCTGAGCTGTGTTaGGGGGATCCCTTTCAAGATGCGGGTGAGCTAGGGCTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALGADSTGASASELC*GDPFQDAGELGLQL Trigger: AAGCTGGAGCCCTAGCTCACCCGCATCTTGAAAGGGATCCCCGCAACACAGCTCAGAAGCAGAGGCCCCAGTGCTGTCAGCACCCAAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 90 bp | CGGAGCTCAGGTGGCAATGCTCTCGGCCCAGCTCACTTCCTGCTGTaGGGCCAGGTTCCTAACAGACCACAAACCAGTACTAGTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSGGNALGPAHFLL*GQVPNRPQTSTSPW Trigger: CCACGGACTAGTACTGGTTTGTGGTCTGTTAGGAACCTGGCCGCACAGCAGGAAGTGAGCTGGGCCGAGAGCATTGCCACCTGAGCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CCA 90 bp | CTCACAACTCCAAGGGTGGCTCCCAGACCAGCATCACCCAAGGCCTaGTCAGAATCTGCATTGCACCAACAGCCCCAGGGGTGGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTTPRVAPRPASPKA*SESALHQQPQGWCA Trigger: TGCACACCACCCCTGGGGCTGTTGGTGCAATGCAGATTCTGACCAGGCCTTGGGTGATGCTGGTCTGGGAGCCACCCTTGGAGTTGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 90 bp | CAGTGGAGAGCTACTACTCACATCCCCGATAAGCCTTCGCATTCTTaGCAAAGGCCACGGGCCGCCACCCCATCATACCGAATGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QWRATTHIPDKPSHS*QRPRAATPSYRMCL Trigger: CAGGCACATTCGGTATGATGGGGTGGCGGCCCGTGGCCTTTGGCAAGAATGCGAAGGCTTATCGGGGATGTGAGTAGTAGCTCTCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
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| CDS-3UTR CAA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCCACCATCTGTGCCTTaGGAACGGAGATCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPQRARVSTVPLWSSSSIPPSVP*ERRSTR Trigger: CCTTGTGGATCTCCGTTCCAAAGGCACAGATGGTGG...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTGTACACAGCAAAGTTaGCAGGGGAGCCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHCTQQS*QGSLWP Trigger: GGGCCAGAGGCTCCCCTGCAAACTTTGCTGTGTACA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000352886.10 ENST00000580002.5 |
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| CDS TCA 90 bp | AAACCAGCGTTCAGCTCCTCTGAGAATCTAATGCTGCCACTGATCTaGCAGGAGGCGGAGCTCAGGTGGCAATGCTCTCGGCCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KPAFSSSENLMLPLI*QEAELRWQCSRPSS Trigger: TGAGCTGGGCCGAGAGCATTGCCACCTGAGCTCCGCCTCCTGTCAGATCAGTGGCAGCATTAGATTCTCAGAGGAGCTGAACGCTGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 90 bp | AAGGGTGGCTCCCAGACCAGCATCACCCAAGGCCTGGTCAGAATCTaGATTGCACCAACAGCCCCAGGGGTGGTGTGCACATTGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KGGSQTSITQGLVRI*IAPTAPGVVCTLKF Trigger: AAACTTCAATGTGCACACCACCCCTGGGGCTGTTGGTGCAATGCAGATTCTGACCAGGCCTTGGGTGATGCTGGTCTGGGAGCCACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCCACCATCTGTGCCTTaGGAACGGAGATCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHPPSVP*ERRSTR Trigger: CCTTGTGGATCTCCGTTCCAAAGGCACAGATGGTGG...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCCCACCATCTGTGCCTTaGGAACGGAGATCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPPQRARVSTVPLWSSSSPPSVP*ERRSTR Trigger: CCTTGTGGATCTCCGTTCCAAAGGCACAGATGGTGG...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGTCAACAGTTCCCCTTaGGAGCAGCTCATCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPQRARVSTVPLWSSSSIVNSSP*EQLIHL Trigger: GAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGAC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS CCA 90 bp | AGGGCCTGTAATCCCTGTAAAGGGCAAAGGACACGGTGCAGAGAGTaGGCACTCAGGTCTACACACAGCAGGACCCATATTCCTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: RACNPCKGQRTRCRE*ALRSTHSRTHIPGP Trigger: TGGTCCAGGAATATGGGTCCTGCTGTGTGTAGACCTGAGTGCCCACTCTCTGCACCGTGTCCTTTGCCCTTTACAGGGATTACAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS-3UTR CAA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTGTACACAGCAAAGTTaGCAGGGGAGCCTGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPPQRARVSTVPLWSSSSCTQQS*QGSLSR Trigger: CCTACTCAGGCTCCCCTGCAAACTTTGCTGTGTACA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000354098.7 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTGTACACAGCAAAGTTaGCAGGGGAGCCTGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHCTQQS*QGSLSR Trigger: CCTACTCAGGCTCCCCTGCAAACTTTGCTGTGTACA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000316694.8 ENST00000354098.7 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGTCAACAGTTCCCCTTaGGAGCAGCTCATCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHVNSSP*EQLIHL Trigger: GAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGAC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGTCAACAGTTCCCCTTaGGAGCAGCTCATCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPPQRARVSTVPLWSSSSVNSSP*EQLIHL Trigger: GAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGAC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS TCA 90 bp | AAAGTAAGTGAAGTAGAACATAAAAGAGGGTACGGCTGGTACTGCTaGGGAGACAGCACTGGCCCGGCCTTCCCAGGCACTGCCGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: KVSEVEHKRGYGWYC*GDSTGPAFPGTAAH Trigger: ATGTGCGGCAGTGCCTGGGAAGGCCGGGCCAGTGCTGTCTCCTCAGCAGTACCAGCCGTACCCTCTTTTATGTTCTACTTCACTTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 90 bp | GGCCTGGTCAGAATCTGCATTGCACCAACAGCCCCAGGGGTGGTGTaGACATTGAAGTTTAAGAAACAGGGACCTAAAGCAGTGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVRICIAPTAPGVV*TLKFKKQGPKAVVP Trigger: GGGGACCACTGCTTTAGGTCCCTGTTTCTTAAACTTCAATGTGCACACCACCCCTGGGGCTGTTGGTGCAATGCAGATTCTGACCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CCA 90 bp | TGCAAAGCTGTTCTGAGGACAAGCAGTCCTTATGCTGGTGACCAATaGCAACCACTATTCCCATCATCTGTGGCTCACCCAAGGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CKAVLRTSSPYAGDQ*QPLFPSSVAHPRGR Trigger: CCGCCCCCTTGGGTGAGCCACAGATGATGGGAATAGTGGTTGCCATTGGTCACCAGCATAAGGACTGCTTGTCCTCAGAACAGCTTTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS-3UTR CAA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCTCAACATCACTGTCTTaGAGGGGTTGTGCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: KPPQRARVSTVPLWSSSSSTSLS*RGCASI Trigger: GATGCTGGCACAACCCCTCAAAGACAGTGATGTTGA...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATTCAACATCACTGTCTTaGAGGGGTTGTGCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHSTSLS*RGCASI Trigger: GATGCTGGCACAACCCCTCAAAGACAGTGATGTTGA...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
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| CDS TCA 90 bp | CCTAGATCCCTCACATGTGCAGTTCAAACCAGCGTTCAGCTCCTCTaGGAATCTAATGCTGCCACTGATCTGACAGGAGGCGGAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRSLTCAVQTSVQLL*ESNAATDLTGGGAQ Trigger: CTGAGCTCCGCCTCCTGTCAGATCAGTGGCAGCATTAGATTCTCAGAGGAGCTGAACGCTGGTTTGAACTGCACATGTGAGGGATCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CCA 90 bp | CACCTCTGTGCTAAAGGCAACCACTCTAACTCTTCAACGTCTTGGTaGTTGAGATGGCCCCAACTACTATTGCCAGCGCAGTCAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLCAKGNHSNSSTSW*LRWPQLLLPAQSGP Trigger: AGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTTAGCACAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
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| CDS-3UTR CAA 90 bp | CCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATCGGCCACCACCTGGTGTaGATAAACTTTAAATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPQRARVSTVPLWSSSSIGHHLV*INFKFQ Trigger: CTGGAATTTAAAGTTTATCAACACCAGGTGGTGGCC...GATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS TCA 90 bp | TCTGTGCTAAAGGCAACCACTCTAACTCTTCAACGTCTTGGTGGTTaGGATGGCCCCAACTACTATTGCCAGCGCAGTCAGGGCCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SVLKATTLTLQRLGG*DGPNYYCQRSQGLT Trigger: TGTCAGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTTAGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS GCA 90 bp | TTAGATCAGAGGGCCTGTAATCCCTGTAAAGGGCAAAGGACACGGTaGAGAGAGTGGGCACTCAGGTCTACACACAGCAGGACCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: LDQRACNPCKGQRTR*REWALRSTHSRTHI Trigger: AATATGGGTCCTGCTGTGTGTAGACCTGAGTGCCCACTCTCTGCACCGTGTCCTTTGCCCTTTACAGGGATTACAGGCCCTCTGATCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS-3UTR CAA 90 bp | ACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCATGGCCACCACCTGGTGTaGATAAACTTTAAATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGPSVNSSPLEQLIHGHHLV*INFKFQ Trigger: CTGGAATTTAAAGTTTATCAACACCAGGTGGTGGCC...ATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS-3UTR CAA 90 bp | AAACCCCCTCAAAGGGCCCGAGTGTCAACAGTTCCCCTTTGGAGCAGCTCATCCGGCCACCACCTGGTGTaGATAAACTTTAAATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPPQRARVSTVPLWSSSSGHHLV*INFKFQ Trigger: CTGGAATTTAAAGTTTATCAACACCAGGTGGTGGCC...GGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000316694.8 ENST00000352886.10 ENST00000354098.7 ENST00000580002.5 ENST00000640392.2 ENST00000644141.2 |
||
| CDS TCA 90 bp | ATCCTCCTGCAAAGCTGTTCTGAGGACAAGCAGTCCTTATGCTGGTaGCCAATGGCAACCACTATTCCCATCATCTGTGGCTCACCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLQSCSEDKQSLCW*PMATTIPIICGSPK Trigger: CTTGGGTGAGCCACAGATGATGGGAATAGTGGTTGCCATTGGTCACCAGCATAAGGACTGCTTGTCCTCAGAACAGCTTTGCAGGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS GCA 90 bp | AGGCACCAAAGAGGGCATTTGCAAGCATTATCTGTCTCAGCCATGTaGATCGGGTCCTCAGATGGCAGAGTGACAATGACACAGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RHQRGHLQALSVSAM*IGSSDGRVTMTQSP Trigger: TGGTGACTGTGTCATTGTCACTCTGCCATCTGAGGACCCGATGCACATGGCTGAGACAGATAATGCTTGCAAATGCCCTCTTTGGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 90 bp | AATGATGTCCTAGATGAGGACTTGAGGGTGAGACAGGATGGATACTaGTGTGTTCAGCCTGCTCAACCAAGTATGGCTCACAGACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NDVLDEDLRVRQDGY*CVQPAQPSMAHRPR Trigger: CCTGGGTCTGTGAGCCATACTTGGTTGAGCAGGCTGAACACACCAGTATCCATCCTGTCTCACCCTCAAGTCCTCATCTAGGACATCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395684.5 |
||
| CDS CCA 90 bp | GCTAAAGGCAACCACTCTAACTCTTCAACGTCTTGGTGGTTGAGATaGCCCCAACTACTATTGCCAGCGCAGTCAGGGCCTGACATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKGNHSNSSTSWWLR*PQLLLPAQSGPDIS Trigger: AGAAATGTCAGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS GCA 90 bp | CATTCACAGCCCATCAGCTCCAGAATGTACAGATCCAAGCAAACATaGCTAAAGCAAGCCAACTCCCCAGGAATATGCAGGAAACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSQPISSRMYRSKQT*LKQANSPGICRKLG Trigger: TCCCAGTTTCCTGCATATTCCTGGGGAGTTGGCTTGCTTTAGGCATGTTTGCTTGGATCTGTACATTCTGGAGCTGATGGGCTGTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS TCA 90 bp | AAGCTTAGGGGTGGGACAGTGAAAATGCAGATGCTGAAGCCAGCATaGTCAAGTGTTCCACCAATGCCTCTGGAATCTACAGTCAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: KLRGGTVKMQMLKPA*SSVPPMPLESTVNQ Trigger: TTGGTTGACTGTAGATTCCAGAGGCATTGGTGGAACACTTGATCATGCTGGCTTCAGCATCTGCATTTTCACTGTCCCACCCCTAAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618902.1 |
||
| CDS TCA 90 bp | CCTGCTGAGAAGGAACCAAAAAGCACCTGCAGAATGAAACAAATGTaGCGGGACCACACAATGGAAACCAAAATGGTTACCTTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PAEKEPKSTCRMKQM*RDHTMETKMVTFRN Trigger: GTTCCTGAAGGTAACCATTTTGGTTTCCATTGTGTGGTCCCGTCACATTTGTTTCATTCTGCAGGTGCTTTTTGGTTCCTTCTCAGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395684.5 |
||
| CDS TCA 90 bp | AAATTTCCAAATTGTTTAGGTCCTAGGCTGACTGAGTACTCCCTATaGCTGTGTCAGAACCAGGCCTTTGAAGATATTCACATACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KFPNCLGPRLTEYSL*LCQNQAFEDIHIPL Trigger: CAGAGGTATGTGAATATCTTCAAAGGCCTGGTTCTGACACAGTCATAGGGAGTACTCAGTCAGCCTAGGACCTAAACAATTTGGAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395682.3 |
||
| CDS CCA 72 bp | GGGCCGCCACCCCATCATACCGAATGTGCCTGGAACTaGGGCGCTGCGGCTGGCCGCCGCCCGATCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPPHHTECAWN*GAAAGRRPIPS Trigger: GCTGGGGATCGGGCGGCGGCCAGCCGCAGCGCCCCAGTTCCAGGCACATTCGGTATGATGGGGTGGCGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
||
| CDS CCA 72 bp | GGCCACGGGCCGCCACCCCATCATACCGAATGTGCCTaGAACTGGGGCGCTGCGGCTGGCCGCCGCCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: GHGPPPHHTECA*NWGAAAGRRPI Trigger: GATCGGGCGGCGGCCAGCCGCAGCGCCCCAGTTCCAGGCACATTCGGTATGATGGGGTGGCGGCCCGTGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
||
| CDS GCA 72 bp | CAAAGGCCACGGGCCGCCACCCCATCATACCGAATGTaGCTGGAACTGGGGCGCTGCGGCTGGCCGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRPRAATPSYRM*LELGRCGWPPP Trigger: GGGCGGCGGCCAGCCGCAGCGCCCCAGTTCCAGGCACATTCGGTATGATGGGGTGGCGGCCCGTGGCCTTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
||
| CDS CCA 72 bp | TCATACCGAATGTGCCTGGAACTGGGGCGCTGCGGCTaGCCGCCGCCCGATCCCCAGCCCAGGCGCGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SYRMCLELGRCG*PPPDPQPRRDP Trigger: TGGGTCGCGCCTGGGCTGGGGATCGGGCGGCGGCCAGCCGCAGCGCCCCAGTTCCAGGCACATTCGGTATGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
||
| CDS CCA 72 bp | CCCATCATCTGTGGCTCACCCAAGGGGGCGGCTGGCTaGTCTGAGGCAGGGGGAGGCTTTCCAGTTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PIICGSPKGAAG*SEAGGGFPVGG Trigger: GCCTCCAACTGGAAAGCCTCCCCCTGCCTCAGACCAGCCAGCCGCCCCCTTGGGTGAGCCACAGATGATGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 72 bp | TTTCCAGTTGGAGGCGAGGCTGACCTCCTCCCAAGGTaGGCCCATCATTGCAGCTGCAGCAGCAGAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPVGGEADLLPR*AHHCSCSSRAW Trigger: CCAGGCTCTGCTGCTGCAGCTGCAATGATGGGCCCACCTTGGGAGGAGGTCAGCCTCGCCTCCAACTGGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 72 bp | CCAAGGGTGGCTCCCAGACCAGCATCACCCAAGGCCTaGTCAGAATCTGCATTGCACCAACAGCCCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVAPRPASPKA*SESALHQQPQG Trigger: CCCCTGGGGCTGTTGGTGCAATGCAGATTCTGACCAGGCCTTGGGTGATGCTGGTCTGGGAGCCACCCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS GCA 72 bp | CTCAGCGGGGTGAGAGAAGACACTCCCCTGGCACAGTaGAAGGCATCACCACACAGTCCTGGTGCCACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LSGVREDTPLAQ*KASPHSPGATY Trigger: GTAGGTGGCACCAGGACTGTGTGGTGATGCCTTGCACTGTGCCAGGGGAGTGTCTTCTCTCACCCCGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS GCA 72 bp | GCTGACAGCACTGGGGCCTCTGCTTCTGAGCTGTGTTaGGGGGATCCCTTTCAAGATGCGGGTGAGCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADSTGASASELC*GDPFQDAGELG Trigger: CCCTAGCTCACCCGCATCTTGAAAGGGATCCCCGCAACACAGCTCAGAAGCAGAGGCCCCAGTGCTGTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 72 bp | CAGGGACTATGGCCTAAACCCTCACAACTCCAAGGGTaGCTCCCAGACCAGCATCACCCAAGGCCTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGLWPKPSQLQG*LPDQHHPRPGQ Trigger: CTGACCAGGCCTTGGGTGATGCTGGTCTGGGAGCCACCCTTGGAGTTGTGAGGGTTTAGGCCATAGTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS GCA 72 bp | GGTGGCAATGCTCTCGGCCCAGCTCACTTCCTGCTGTaGGGCCAGGTTCCTAACAGACCACAAACCAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GGNALGPAHFLL*GQVPNRPQTST Trigger: AGTACTGGTTTGTGGTCTGTTAGGAACCTGGCCGCACAGCAGGAAGTGAGCTGGGCCGAGAGCATTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 72 bp | GCTACTACTCACATCCCCGATAAGCCTTCGCATTCTTaGCAAAGGCCACGGGCCGCCACCCCATCATACCGA | + |
|
Preference number: 6 (lower is better) Translates to: ATTHIPDKPSHS*QRPRAATPSYR Trigger: TCGGTATGATGGGGTGGCGGCCCGTGGCCTTTGGCAAGAATGCGAAGGCTTATCGGGGATGTGAGTAGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
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| CDS TCA 72 bp | GAAGTAGAACATAAAAGAGGGTACGGCTGGTACTGCTaGGGAGACAGCACTGGCCCGGCCTTCCCAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: EVEHKRGYGWYC*GDSTGPAFPGT Trigger: AGTGCCTGGGAAGGCCGGGCCAGTGCTGTCTCCTCAGCAGTACCAGCCGTACCCTCTTTTATGTTCTACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 72 bp | AGGGCCTGTAATCCCTGTAAAGGGCAAAGGACACGGTaGAGAGAGTGGGCACTCAGGTCTACACACAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RACNPCKGQRTR*REWALRSTHSR Trigger: CCTGCTGTGTGTAGACCTGAGTGCCCACTCTCTGCACCGTGTCCTTTGCCCTTTACAGGGATTACAGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 72 bp | GACCAGCATCACCCAAGGCCTGGTCAGAATCTGCATTaGACCAACAGCCCCAGGGGTGGTGTGCACATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: DQHHPRPGQNLH*TNSPRGGVHIE Trigger: TTCAATGTGCACACCACCCCTGGGGCTGTTGGTGCAATGCAGATTCTGACCAGGCCTTGGGTGATGCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS GCA 72 bp | GAGGGTGAGACAGGATGGATACTGGTGTGTTCAGCCTaGTCAACCAAGTATGGCTCACAGACCCAGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGETGWILVCSA*STKYGSQTQES Trigger: GGACTCCTGGGTCTGTGAGCCATACTTGGTTGAGCAGGCTGAACACACCAGTATCCATCCTGTCTCACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395684.5 |
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| CDS CCA 72 bp | ATGGATACTGGTGTGTTCAGCCTGCTCAACCAAGTATaGCTCACAGACCCAGGAGTCCCTGAGGAGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MDTGVFSLLNQV*LTDPGVPEESQ Trigger: CTGGGACTCCTCAGGGACTCCTGGGTCTGTGAGCCATACTTGGTTGAGCAGGCTGAACACACCAGTATCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395684.5 |
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| CDS CCA 72 bp | GGCACTCAGGTCTACACACAGCAGGACCCATATTCCTaGACCACACCACTGCTAGCACAATCGGCAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTQVYTQQDPYS*TTPLLAQSAVL Trigger: CAAGACTGCCGATTGTGCTAGCAGTGGTGTGGTCCAGGAATATGGGTCCTGCTGTGTGTAGACCTGAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CAA 90 bp | CTCTGTGCTAAAGGCAACCACTCTAACTCTTCAACGTCTTGGTGGTaGAGATGGCCCCAACTACTATTGCCAGCGCAGTCAGGGCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LCAKGNHSNSSTSWW*RWPQLLLPAQSGPD Trigger: GTCAGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTTAGCACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
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| CDS CCA 72 bp | AACCACTCTAACTCTTCAACGTCTTGGTGGTTGAGATaGCCCCAACTACTATTGCCAGCGCAGTCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NHSNSSTSWWLR*PQLLLPAQSGP Trigger: AGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
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| CDS CCA 72 bp | ATTATCTGTCTCAGCCATGTGCATCGGGTCCTCAGATaGCAGAGTGACAATGACACAGTCACCAGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IICLSHVHRVLR*QSDNDTVTRER Trigger: CCTCTCCCTGGTGACTGTGTCATTGTCACTCTGCCATCTGAGGACCCGATGCACATGGCTGAGACAGATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 72 bp | GGTGACAACAGCAAGGCTAACAGAGTTTTCTGGACCTaGCCCGAGGTCATACAGGAGGATCCTTCCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GDNSKANRVFWT*PEVIQEDPSTL Trigger: CAAAGTGGAAGGATCCTCCTGTATGACCTCGGGCCAGGTCCAGAAAACTCTGTTAGCCTTGCTGTTGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CAA 72 bp | CTGAGTACTCCCTATGACTGTGTCAGAACCAGGCCTTaGAAGATATTCACATACCTCTGGCCCGGGTACCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTPYDCVRTRP*KIFTYLWPGYP Trigger: GGGGTACCCGGGCCAGAGGTATGTGAATATCTTCAAAGGCCTGGTTCTGACACAGTCATAGGGAGTACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395682.3 |
||
| CDS CAA 72 bp | TCAACGTCTTGGTGGTTGAGATGGCCCCAACTACTATaGCCAGCGCAGTCAGGGCCTGACATTTCTAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: STSWWLRWPQLL*PAQSGPDISRC Trigger: GCATCTAGAAATGTCAGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS CAA 90 bp | GGCTCCACCCACCATGACAAGAGGAATGATGTCCTAGATGAGGACTaGAGGGTGAGACAGGATGGATACTGGTGTGTTCAGCCTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GSTHHDKRNDVLDED*RVRQDGYWCVQPAQ Trigger: TTGAGCAGGCTGAACACACCAGTATCCATCCTGTCTCACCCTCAAGTCCTCATCTAGGACATCATTCCTCTTGTCATGGTGGGTGGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395684.5 |
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| CDS CAA 90 bp | CAGCTTCCTCAGGCTGCTCCTGGCTTGTTTTCTCTGACAAGTTGCTaGGGCAATTCCCTAACATTGATGGTAAAGGCTCCCCTGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLPQAAPGLFSLTSC*GNSLTLMVKAPLKA Trigger: TGCCTTCAGGGGAGCCTTTACCATCAATGTTAGGGAATTGCCCAAGCAACTTGTCAGAGAAAACAAGCCAGGAGCAGCCTGAGGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS TCA 72 bp | AAGGCAACCACTCTAACTCTTCAACGTCTTGGTGGTTaGGATGGCCCCAACTACTATTGCCAGCGCAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KATTLTLQRLGG*DGPNYYCQRSQ Trigger: CTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS CCA 72 bp | GCTAAAGGCAACCACTCTAACTCTTCAACGTCTTGGTaGTTGAGATGGCCCCAACTACTATTGCCAGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AKGNHSNSSTSW*LRWPQLLLPAQ Trigger: CTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS CCA 72 bp | GTTCTGAGGACAAGCAGTCCTTATGCTGGTGACCAATaGCAACCACTATTCCCATCATCTGTGGCTCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLRTSSPYAGDQ*QPLFPSSVAHP Trigger: TGGGTGAGCCACAGATGATGGGAATAGTGGTTGCCATTGGTCACCAGCATAAGGACTGCTTGTCCTCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CAA 90 bp | TCTAACTCTTCAACGTCTTGGTGGTTGAGATGGCCCCAACTACTATaGCCAGCGCAGTCAGGGCCTGACATTTCTAGATGCTTCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SNSSTSWWLRWPQLL*PAQSGPDISRCFSE Trigger: CTCAGAGAAGCATCTAGAAATGTCAGGCCCTGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS TCA 72 bp | CAAAGCTGTTCTGAGGACAAGCAGTCCTTATGCTGGTaGCCAATGGCAACCACTATTCCCATCATCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSCSEDKQSLCW*PMATTIPIICG Trigger: GCCACAGATGATGGGAATAGTGGTTGCCATTGGTCACCAGCATAAGGACTGCTTGTCCTCAGAACAGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS GCA 72 bp | CCCATCAGCTCCAGAATGTACAGATCCAAGCAAACATaGCTAAAGCAAGCCAACTCCCCAGGAATATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PISSRMYRSKQT*LKQANSPGICR Trigger: CCTGCATATTCCTGGGGAGTTGGCTTGCTTTAGGCATGTTTGCTTGGATCTGTACATTCTGGAGCTGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 72 bp | TGTGCTAAAGGCAACCACTCTAACTCTTCAACGTCTTaGTGGTTGAGATGGCCCCAACTACTATTGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CAKGNHSNSSTS*WLRWPQLLLPA Trigger: CGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTTAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS CAA 72 bp | AAAGGCAACCACTCTAACTCTTCAACGTCTTGGTGGTaGAGATGGCCCCAACTACTATTGCCAGCGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: KGNHSNSSTSWW*RWPQLLLPAQS Trigger: TGACTGCGCTGGCAATAGTAGTTGGGGCCATCTCAACCACCAAGACGTTGAAGAGTTAGAGTGGTTGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579558.5 |
||
| CDS CAA 72 bp | CAGGCTGCTCCTGGCTTGTTTTCTCTGACAAGTTGCTaGGGCAATTCCCTAACATTGATGGTAAAGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAAPGLFSLTSC*GNSLTLMVKAP Trigger: GGGAGCCTTTACCATCAATGTTAGGGAATTGCCCAAGCAACTTGTCAGAGAAAACAAGCCAGGAGCAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS GCA 72 bp | CCTCAGGCTGCTCCTGGCTTGTTTTCTCTGACAAGTTaGTTGGGCAATTCCCTAACATTGATGGTAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PQAAPGLFSLTS*LGNSLTLMVKA Trigger: AGCCTTTACCATCAATGTTAGGGAATTGCCCAAGCAACTTGTCAGAGAAAACAAGCCAGGAGCAGCCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
||
| CDS CCA 72 bp | GGCAGCATGAATATTGGGCAGCAGTTCAATTTACTTTaGGGGGTAAGGGGCATGTTCACAGAGCACATTAGG | + |
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Preference number: 6 (lower is better) Translates to: GSMNIGQQFNLL*GVRGMFTEHIR Trigger: CCTAATGTGCTCTGTGAACATGCCCCTTACCCCCCAAAGTAAATTGAACTGCTGCCCAATATTCATGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CAA 72 bp | TCCTCAGGCTGCTCCTGGCTTGTTTTCTCTGACAAGTaGCTTGGGCAATTCCCTAACATTGATGGTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SSGCSWLVFSDK*LGQFPNIDGKG Trigger: GCCTTTACCATCAATGTTAGGGAATTGCCCAAGCAACTTGTCAGAGAAAACAAGCCAGGAGCAGCCTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS TCA 72 bp | AGCACCCTGAAGTTCACAGTCTGCACGAGGACTTCTTaGGCTTTATTATTTGAAGACATGGAGGATGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: STLKFTVCTRTS*ALLFEDMEDEG Trigger: CCCTTCATCCTCCATGTCTTCAAATAATAAAGCTCAAGAAGTCCTCGTGCAGACTGTGAACTTCAGGGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS TCA 72 bp | AATTGTTTAGGTCCTAGGCTGACTGAGTACTCCCTATaGCTGTGTCAGAACCAGGCCTTTGAAGATATTCAC | + |
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Preference number: 6 (lower is better) Translates to: NCLGPRLTEYSL*LCQNQAFEDIH Trigger: GTGAATATCTTCAAAGGCCTGGTTCTGACACAGTCATAGGGAGTACTCAGTCAGCCTAGGACCTAAACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395682.3 |
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| CDS TCA 72 bp | AAGGAACCAAAAAGCACCTGCAGAATGAAACAAATGTaGCGGGACCACACAATGGAAACCAAAATGGTTACC | + |
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Preference number: 6 (lower is better) Translates to: KEPKSTCRMKQM*RDHTMETKMVT Trigger: GGTAACCATTTTGGTTTCCATTGTGTGGTCCCGTCACATTTGTTTCATTCTGCAGGTGCTTTTTGGTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395684.5 |
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| CDS CCA 72 bp | AACAAATGTGACGGGACCACACAATGGAAACCAAAATaGTTACCTTCAGGAACAAGACCAAAATGCCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: NKCDGTTQWKPK*LPSGTRPKCLL Trigger: TAGCAGGCATTTTGGTCTTGTTCCTGAAGGTAACCATTTTGGTTTCCATTGTGTGGTCCCGTCACATTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395684.5 |
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| CDS CAA 72 bp | TCACAGTCTGCACGAGGACTTCTTGAGCTTTATTATTaGAAGACATGGAGGATGAAGGGAGAACAGAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: SQSARGLLELYY*KTWRMKGEQKV Trigger: TACTTTCTGTTCTCCCTTCATCCTCCATGTCTTCAAATAATAAAGCTCAAGAAGTCCTCGTGCAGACTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582352.1 |
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| CDS CAA 72 bp | CACTTGACTTGCAGCTTTGTTGTGAAGGAGCTAGGATaGTTTAAATCGAAAATGCTCAACGAGAAAAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HLTCSFVVKELG*FKSKMLNEKSV Trigger: AACACTTTTCTCGTTGAGCATTTTCGATTTAAACAATCCTAGCTCCTTCACAACAAAGCTGCAAGTCAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582653.1 |
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