Pregenerated sensors for SHLD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171984Ensembl transcript IDs: ENST00000303142.11, ENST00000378979.8, ENST00000442185.1, ENST00000445603.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGAGACCCTAGGGGATCTGGGTGGCCACCAACACTGCTGGTCATaGCACAGCACCTCCATTACTACCCTGCACACTGCCCGGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: PETLGDLGGHQHCWS*HSTSITTLHTARHQ Trigger: CTGGTGCCGGGCAGTGTGCAGGGTAGTAATGGAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR CCA 90 bp | AGCTGGCCAGAGACCCTAGGGGATCTGGGTGGCCACCAACACTGCTaGTCATGGCACAGCACCTCCATTACTACCCTGCACACTGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: SWPETLGDLGGHQHC*SWHSTSITTLHTAR Trigger: CCGGGCAGTGTGCAGGGTAGTAATGGAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR GCA 90 bp | CAGAGCTGGCCAGAGACCCTAGGGGATCTGGGTGGCCACCAACACTaGTGGTCATGGCACAGCACCTCCATTACTACCCTGCACACTGCC | + |
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Preference number: 1 (lower is better) Translates to: QSWPETLGDLGGHQH*WSWHSTSITTLHTA Trigger: GGCAGTGTGCAGGGTAGTAATGGAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR GCA 90 bp | GTCAGTCAGCGGCCTTGGCCAAGAGGACGGAGAACTCCCAGACCCTaGTGGCTCTCCATATGGGCTGACTGGCTCCAATACCAGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: VSQRPWPRGRRTPRP*WLSIWADWLQYQVT Trigger: TGTGACCTGGTATTGGAGCCAGTCAGCCCATATGGAGAGCCAGCAGGGTCTGGGAGTTCTCCGTCCTCTTGGCCAAGGCCGCTGACTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR CCA 90 bp | GGGATTGGGCACACAGAGCTGGCCAGAGACCCTAGGGGATCTGGGTaGCCACCAACACTGCTGGTCATGGCACAGCACCTCCATTACTAC | + |
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Preference number: 1 (lower is better) Translates to: GIGHTELARDPRGSG*PPTLLVMAQHLHYY Trigger: GTAGTAATGGAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCTCTGTGTGCCCAATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR TCA 90 bp | ACTCCTCAGAGAATGTCCTTCCTTGAGGCAAGGGAGCTGGGCTTTTaGCTCGTAGCCCAGTCAGTCAGCGGCCTTGGCCAAGAGGACGGA | + |
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Preference number: 1 (lower is better) Translates to: TPQRMSFLEARELGF*LVAQSVSGLGQEDG Trigger: TCCGTCCTCTTGGCCAAGGCCGCTGACTGACTGGGCTACGAGTCAAAAGCCCAGCTCCCTTGCCTCAAGGAAGGACATTCTCTGAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR GCA 90 bp | ACAATAACAAAAAGACATCCAGGAAACAGCTCCTTGTCATTGCTGTaGCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAAGCTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: TITKRHPGNSSLSLL*QVSCPLKFLLKALL Trigger: AAGCAAAGCTTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGGATGTCTTTTTGTTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378979.8 |
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| 3UTR TCA 90 bp | AATGACATGGTCTCAGTTTTACAACTTGATATAATTCCTTATACCTaGTTCGGTGTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACA | + |
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Preference number: 1 (lower is better) Translates to: NDMVSVLQLDIIPYT*FGVELCILLKPHLT Trigger: TGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAATCAGGTATAAGGAATTATATCAAGTTGTAAAACTGAGACCATGTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCAGGCCACCAACACTGCTaGTCATGGCACAGCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: YSLQTQLDKATWHQPSVAGHQHC*SWHSTS Trigger: GGAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCC...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGGGTGTGATTTCATGTAATGTCCCAGCCTCAGGCCGATCTAGAGGAAAGGAGAATGTCCTTCCTTaGGGCAAGGGAGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SKGVISCNVPASGRSRGKENVLP*GKGAGL Trigger: AAGCCCAGCTCCCTTGCCTCAAGGAAGGACATTCTC...CTTTCCTCTAGATCGGCCTGAGGCTGGGACATTACATGAAATCACACCCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CCA 90 bp | CTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCCCAGAAGTCCTAGGGGATCTGGGTaGCCACCAACACTGCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LKPHLTEACSLRVNSPRSPRGSG*PPTLLV Trigger: GACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGG...ACTTCTGGGAGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR TCA 90 bp | TGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTAGGGAGCTGGGCTTTTaGCTCGTAGCCCAGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CILLKPHLTEACSLRVNSRELGF*LVAQSV Trigger: GACTGACTGGGCTACGAGTCAAAAGCCCAGCTCCCT...AGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CCA 90 bp | TGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTGCACTTAATTGGGATTaGGCACACAGAGCTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: CILLKPHLTEACSLRVNSALNWD*AHRAGQ Trigger: CTGGCCAGCTCTGTGTGCCCAATCCCAATTAAGTGC...AGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CCA 90 bp | CTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCCCAGAAGTCTCAAAGCACTTAATTaGGATTGGGCACACAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LKPHLTEACSLRVNSPRSLKALN*DWAHRA Trigger: AGCTCTGTGTGCCCAATCCCAATTAAGTGCTTTGAG...ACTTCTGGGAGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCATTACATATACTGTGGTaGGTGGTGCACATTTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: YSLQTQLDKATWHQPSVALHILW*VVHICY Trigger: GTAACAAATGTGCACCACCCACCACAGTATATGTAA...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR TCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTGAGGAGGCAAGGGTGTaGTCAAGATGTGATATACTT | + |
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Preference number: 2 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPEEARV*SRCDIL Trigger: AAGTATATCACATCTTGATCACACCCTTGCCTCCTC...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCAGTATTCTCAATGACATaGTCTCAGTTTTACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: YSLQTQLDKATWHQPSVAVFSMT*SQFYNL Trigger: CAAGTTGTAAAACTGAGACCATGTCATTGAGAATAC...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR GCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTCTCACCTTTCACGTTTaGAATCTGATAAAAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPLTFHV*NLIKDK Trigger: CTTGTCTTTTATCAGATTGCAAACGTGAAAGGTGAG...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR CCA 72 bp | CACACAGAGCTGGCCAGAGACCCTAGGGGATCTGGGTaGCCACCAACACTGCTGGTCATGGCACAGCACCTC | + |
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Preference number: 3 (lower is better) Translates to: HTELARDPRGSG*PPTLLVMAQHL Trigger: GAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCTCTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR TCA 72 bp | GAGAACTCCCAGACCCTGCTGGCTCTCCATATGGGCTaGCTGGCTCCAATACCAGGTCACAGGTGCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ENSQTLLALHMG*LAPIPGHRCQP Trigger: AGGCTGGCACCTGTGACCTGGTATTGGAGCCAGTCAGCCCATATGGAGAGCCAGCAGGGTCTGGGAGTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR TCA 72 bp | AGAATGTCCTTCCTTGAGGCAAGGGAGCTGGGCTTTTaGCTCGTAGCCCAGTCAGTCAGCGGCCTTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: RMSFLEARELGF*LVAQSVSGLGQ Trigger: TTGGCCAAGGCCGCTGACTGACTGGGCTACGAGTCAAAAGCCCAGCTCCCTTGCCTCAAGGAAGGACATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CAA 90 bp | GTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGAGTCAGTCAGCGGCCTaGGCCAAGAGGACGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: VELCILLKPHLTEACSLRSQSAA*AKRTEN Trigger: GTTCTCCGTCCTCTTGGCCAAGGCCGCTGACTGACT...CCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR-3UTR CAA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCACATGGATTTCTAGCTTaGGAGAGGAGGCAAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: YSLQTQLDKATWHQPSVAHGFLA*ERRQGC Trigger: ACACCCTTGCCTCCTCTCCAAAGCTAGAAATCCATG...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR GCA 72 bp | AAAAGACATCCAGGAAACAGCTCCTTGTCATTGCTGTaGCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KRHPGNSSLSLL*QVSCPLKFLLK Trigger: TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGGATGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378979.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTATTTTTATTACTCATCACACATAACAGGCCCACATTGCTATTTTCTGAAGCCAGGAAACAGCTCCTaGTCATTGCTGTGCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: LYFYYSSHITGPHCYFLKPGNSS*SLLCQV Trigger: TACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGG...CTTCAGAAAATAGCAATGTGGGCCTGTTATGTGTGATGAGTAATAAAAATAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378979.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTTCTCACCTTTATTCGGTGTAGAGCTTaGTATCCTTCTAAAACCTCA | + |
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Preference number: 3 (lower is better) Translates to: LCLHILWWVVHICYLLTFIRCRA*YPSKTS Trigger: TGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT...AAAGGTGAGAAGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR TCA 72 bp | TGTTCTCTCAGGGTGAATTCTCCCAGAAGTAGACTCTaGGTCAAGGATTCAGATATAAGAGGTTTATTAAGG | + |
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Preference number: 3 (lower is better) Translates to: CSLRVNSPRSRL*VKDSDIRGLLR Trigger: CCTTAATAAACCTCTTATATCTGAATCCTTGACTCAGAGTCTACTTCTGGGAGAATTCACCCTGAGAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| 3UTR TCA 72 bp | GTCTCAGTTTTACAACTTGATATAATTCCTTATACCTaGTTCGGTGTAGAGCTTTGTATCCTTCTAAAACCT | + |
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Preference number: 3 (lower is better) Translates to: VSVLQLDIIPYT*FGVELCILLKP Trigger: AGGTTTTAGAAGGATACAAAGCTCTACACCGAATCAGGTATAAGGAATTATATCAAGTTGTAAAACTGAGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | AGAGACCCTAGGGGATCTGGGTGGCCACCAACACTGCTGGTCATGGCACAGCACAGCAGCCGTCCCGGTTaGAGATCACCCGGGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: RDPRGSGWPPTLLVMAQHSSRPG*RSPGPF Trigger: AAATGGCCCGGGTGATCTTCAACCGGGACGGCTGCT...GTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CCA 90 bp | GGGATTGGGCACACAGAGCTGGCCAGAGACCCTAGGGGATCTGGGTGGCCACCAAGAAGTGGGTGTCCCTaGAATGCCTCTGTAAGACGG | + |
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Preference number: 4 (lower is better) Translates to: GIGHTELARDPRGSGWPPRSGCP*NASVRR Trigger: CCGTCTTACAGAGGCATTCCAGGGACACCCACTTCT...TGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCTCTGTGTGCCCAATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | AGAGACCCTAGGGGATCTGGGTGGCCACCAACACTGCTGGTCATGGCACAGCACATGAGTAATATCCTTTaGCAGTCCTGGGTTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RDPRGSGWPPTLLVMAQHMSNIL*QSWVWL Trigger: AAGCCAAACCCAGGACTGTCAAAGGATATTACTCAT...GTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | GGGATTGGGCACACAGAGCTGGCCAGAGACCCTAGGGGATCTGGGTGGCCACCAGGTGTGATCAAGATGTaGTATACTTTTCTCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: GIGHTELARDPRGSGWPPGVIKM*YTFLNC Trigger: ACAGTTGAGAAAAGTATATCACATCTTGATCACACC...TGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCTCTGTGTGCCCAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CCA 90 bp | AGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAATCGCTGTTGGCTTCTTaGCTGGGTCCCTGCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: SSLSLLCQVSCPLKFLLKSLLAS*LGPCRT Trigger: CGTCCTGCAGGGACCCAGCCAAGAAGCCAACAGCGA...TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378979.8 |
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| CDS-3UTR GCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCACCTCCATTACTACCCTaGACACTGCCCGGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: YSLQTQLDKATWHQPSVAPPLLP*TLPGTS Trigger: ACTGGTGCCGGGCAGTGTGCAGGGTAGTAATGGAGG...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CCA 90 bp | AGCAAGGGTGTGATTTCATGTAATGTCCCAGCCTCAGGCCGATCTAGAGGAAAGCTTGACAAGGCCACGTaGCATCAGCCTAGCGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SKGVISCNVPASGRSRGKLDKAT*HQPSVA Trigger: TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAG...CTTTCCTCTAGATCGGCCTGAGGCTGGGACATTACATGAAATCACACCCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCAGAGAATGTCCTTCCTTaGGGCAAGGGAGCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: YSLQTQLDKATWHQPSVAENVLP*GKGAGL Trigger: AAGCCCAGCTCCCTTGCCTCAAGGAAGGACATTCTC...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | AGAGACCCTAGGGGATCTGGGTGGCCACCAACACTGCTGGTCATGGCACAGCACATAATTCCTTATACCTaGTTCGGTGTAGAGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: RDPRGSGWPPTLLVMAQHIIPYT*FGVELC Trigger: ACAAAGCTCTACACCGAATCAGGTATAAGGAATTAT...GTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCAAGCACTCCAGAAAACTaGGGAGAAAAGCCGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: YSLQTQLDKATWHQPSVASTPEN*GEKPPS Trigger: GCTTGGCGGCTTTTCTCCTCAGTTTTCTGGAGTGCT...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | AGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAAAGCACTCCAGAAAACTaGGGAGAAAAGCCGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSLSLLCQVSCPLKFLLKSTPEN*GEKPPS Trigger: GCTTGGCGGCTTTTCTCCTCAGTTTTCTGGAGTGCT...TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378979.8 |
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| CDS-3UTR CCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCAGCACTTAATTGGGATTaGGCACACAGAGCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YSLQTQLDKATWHQPSVAALNWD*AHRAGQ Trigger: CTGGCCAGCTCTGTGTGCCCAATCCCAATTAAGTGC...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CCA 90 bp | AGAGACCCTAGGGGATCTGGGTGGCCACCAACACTGCTGGTCATGGCACAGCACGTATTCTCAATGACATaGTCTCAGTTTTACAACTTG | + |
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Preference number: 4 (lower is better) Translates to: RDPRGSGWPPTLLVMAQHVFSMT*SQFYNL Trigger: CAAGTTGTAAAACTGAGACCATGTCATTGAGAATAC...GTGCTGTGCCATGACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGGGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | AGCAAGGGTGTGATTTCATGTAATGTCCCAGCCTCAGGCCGATCTAGAGGAAAGCATGTTCTCTCAGGGTaGATTCTCCCAGAAGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: SKGVISCNVPASGRSRGKHVLSG*ILPEVD Trigger: GTCTACTTCTGGGAGAATTCACCCTGAGAGAACATG...CTTTCCTCTAGATCGGCCTGAGGCTGGGACATTACATGAAATCACACCCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CCA 90 bp | ATTCGGTGTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCGGCCACCAACACTGCTaGTCATGGCACAGCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: IRCRALYPSKTSSHRSMFGHQHC*SWHSTS Trigger: GGAGGTGCTGTGCCATGACCAGCAGTGTTGGTGGCC...GAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CCA 90 bp | ATTCGGTGTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCCCTAGGGGATCTGGGTaGCCACCAACACTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: IRCRALYPSKTSSHRSMFPRGSG*PPTLLV Trigger: GACCAGCAGTGTTGGTGGCCACCCAGATCCCCTAGG...GAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | CTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCCCAGAAGTATCCTCTTCCTTCTCTaGCTGGCCTTTCACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LKPHLTEACSLRVNSPRSILFLL*LAFHSR Trigger: CCTGCTGTGAAAGGCCAGTCAGAGAAGGAAGAGGAT...ACTTCTGGGAGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTATCACCCGGGCCATTTaGAAACTGCGGAGGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPITRAI*KLRRAY Trigger: GTATGCCCTCCGCAGTTTTCAAATGGCCCGGGTGAT...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR TCA 90 bp | TTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCAGGGAGCTGGGCTTTTaGCTCGTAGCCCAGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LYPSKTSSHRSMFSQGEFRELGF*LVAQSV Trigger: GACTGACTGGGCTACGAGTCAAAAGCCCAGCTCCCT...GAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR GCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTTACTACCCTGCACACTaGCCGGCACCAGTTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPYYPAH*PAPVTG Trigger: ACCTGTAACTGGTGCCGGGCAGTGTGCAGGGTAGTA...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGGTGTGATTTCATGTAATGTCCCAGCCTCAGGCCGATCTAGAGGAAAGTACTGTGGTGGGTGGTaGACATTTGTTACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKGVISCNVPASGRSRGKYCGGW*TFVTFS Trigger: TGAGAAGGTAACAAATGTGCACCACCCACCACAGTA...CTTTCCTCTAGATCGGCCTGAGGCTGGGACATTACATGAAATCACACCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CCA 90 bp | TATAAGAGGTTTATTAAGGAAAGGCTCCCAGAGACACCAGTAAATAAATGGGAGTCGCTGTTGGCTTCTTaGCTGGGTCCCTGCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YKRFIKERLPETPVNKWESLLAS*LGPCRT Trigger: CGTCCTGCAGGGACCCAGCCAAGAAGCCAACAGCGA...CTCCCATTTATTTACTGGTGTCTCTGGGAGCCTTTCCTTAATAAACCTCTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAACCACTCTCTCTTTGTTaGACCAAATATTCCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLSLLCQVSCPLKFLLKPLSLC*TKYSPA Trigger: AGCAGGGGAATATTTGGTTCAACAAAGAGAGAGTGG...TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTCTTCAAACACAACTTGACAAGGCCACGTGGCATCAGCCTAGCGTAGCACCCAGAAGTAGACTCTaGGTCAAGGATTCAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: YSLQTQLDKATWHQPSVAPRSRL*VKDSDI Trigger: TATATCTGAATCCTTGACTCAGAGTCTACTTCTGGG...TGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR GCA 90 bp | ATAACAAAAAGACATCCAGGAAACAGCTCCTTGTCATTGCTGTGCCAGGTAAGCTCCTTGTCATTGCTGTaGCAGGTAAGCTGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITKRHPGNSSLSLLCQVSSLSLL*QVSCPL Trigger: CAAAGGACAGCTTACCTGGCACAGCAATGACAAGGA...GCTTACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGGATGTCTTTTTGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAATTCTCAGAGATCTGCTaGATCCACATCAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QLLVIAVPGKLSFEVPPEFSEIC*IHIRRI Trigger: TATTCTTCTGATGTGGATCCAGCAGATCTCTGAGAA...TTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCTTATGTCACACGCTaGTGGCAGGTCCAAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LYPSKTSSHRSMFSQGEFSYVTR*WQVQST Trigger: AGTGCTTTGGACCTGCCATCAGCGTGTGACATAAGA...GAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTGGAATTCCAAAGAACTaGAAGCCTCGCTGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPGIPKN*KPRCWL Trigger: AAGCCAACAGCGAGGCTTTCAGTTCTTTGGAATTCC...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | TTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCTTCAAACACAACTTaGCAAGGCCACGTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LYPSKTSSHRSMFSQGEFSSNTT*QGHVAS Trigger: TGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGA...GAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAACTTCTGAATTCATTTTaGGGGAGATTAGAAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLSLLCQVSCPLKFLLKLLNSF*GRLERD Trigger: GTCTCTTTCTAATCTCCCTCAAAATGAATTCAGAAG...TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CCA 90 bp | TATAAGAGGTTTATTAAGGAAAGGCTCCCAGAGACACCAGTAAATAAATGGGAGTCTTCCTTCTCTGACTaGCCTTTCACAGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKRFIKERLPETPVNKWESSFSD*PFTAGS Trigger: TGACCCTGCTGTGAAAGGCCAGTCAGAGAAGGAAGA...CTCCCATTTATTTACTGGTGTCTCTGGGAGCCTTTCCTTAATAAACCTCTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | ATTCGGTGTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCGAGGAGGCAAGGGTGTaGTCAAGATGTGATATACTT | + |
|
Preference number: 4 (lower is better) Translates to: IRCRALYPSKTSSHRSMFEEARV*SRCDIL Trigger: AAGTATATCACATCTTGATCACACCCTTGCCTCCTC...GAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTTCTCACCTTTATATACTGTGGTGGGTaGTGCACATTTGTTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCLHILWWVVHICYLLTFIYCGG*CTFVTF Trigger: GAAGGTAACAAATGTGCACCACCCACCACAGTATAT...AAAGGTGAGAAGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTTGCTTACATATACTGTaGTGGGTGGTGCACATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPCLHIL*WVVHIC Trigger: ACAAATGTGCACCACCCACCACAGTATATGTAAGCA...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| 3UTR CAA 72 bp | ATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTaGTTACCTTCTCACCTTTCACGTTTGCAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVLTYTVVGGAH*LPSHLSRLQSD Trigger: ATCAGATTGCAAACGTGAAAGGTGAGAAGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | CTCTATTTTTATTACTCATCACACATAACAGGCCCACATTGCTATTTTCTGAAGTCTTATGTCACACGCTaGTGGCAGGTCCAAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LYFYYSSHITGPHCYFLKSYVTR*WQVQST Trigger: AGTGCTTTGGACCTGCCATCAGCGTGTGACATAAGA...CTTCAGAAAATAGCAATGTGGGCCTGTTATGTGTGATGAGTAATAAAAATAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCCCAGAAGTCTATATTTAAGTTACTaGTGTCTGGATCCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPHLTEACSLRVNSPRSLYLSY*CLDPHQ Trigger: CTGATGTGGATCCAGACACCAGTAACTTAAATATAG...ACTTCTGGGAGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CCA 90 bp | TATAAGAGGTTTATTAAGGAAAGGCTCCCAGAGACACCAGTAAATAAATGGGAGCTCAAAGCACTTAATTaGGATTGGGCACACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKRFIKERLPETPVNKWELKALN*DWAHRA Trigger: AGCTCTGTGTGCCCAATCCCAATTAAGTGCTTTGAG...CTCCCATTTATTTACTGGTGTCTCTGGGAGCCTTTCCTTAATAAACCTCTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTTTACATATACTGTGGTaGGTGGTGCACATTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPLHILW*VVHICY Trigger: GTAACAAATGTGCACCACCCACCACAGTATATGTAA...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | CGTAGCATAATTGTGCTTACATATACTGTGGTGGGTGGTGCACATTTGTTACCTGACATGTATTCTCAATaGCATGGTCTCAGTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RSIIVLTYTVVGGAHLLPDMYSQ*HGLSFT Trigger: TGTAAAACTGAGACCATGTCATTGAGAATACATGTC...AGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR TCA 90 bp | CTCTATTTTTATTACTCATCACACATAACAGGCCCACATTGCTATTTTCTGAAGTTCTGCCTAAGACAATaGAGCATTCTCAGAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYFYYSSHITGPHCYFLKFCLRQ*SILRDL Trigger: CAGATCTCTGAGAATGCTTCATTGTCTTAGGCAGAA...CTTCAGAAAATAGCAATGTGGGCCTGTTATGTGTGATGAGTAATAAAAATAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS CCA 90 bp | CTATCCAGGGATTTCCGAAGGCCATCATCCTCTTCCTTCTCTGACTaGCCTTTCACAGCAGGGTCAAGCCAGAAGTTCTCAGCGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSRDFRRPSSSSFSD*PFTAGSSQKFSAVQ Trigger: CTGGACCGCTGAGAACTTCTGGCTTGACCCTGCTGTGAAAGGCCAGTCAGAGAAGGAAGAGGATGATGGCCTTCGGAAATCCCTGGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303142.11 ENST00000442185.1 ENST00000445603.1 |
||
| CDS-3UTR CAA 90 bp | GGGATTGGGCACACAGAGCTGGCCAGAGACCCTAGGGGATCTGGGTGGCCACCATCTCACCTTTCACGTTaGCAATCTGATAAAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: GIGHTELARDPRGSGWPPSHLSR*QSDKRQ Trigger: TTGTCTTTTATCAGATTGCAAACGTGAAAGGTGAGA...TGGTGGCCACCCAGATCCCCTAGGGTCTCTGGCCAGCTCTGTGTGCCCAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | CTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCCCAGAAGTCTGAAAGCCTCGCTGTaGGCTTCTTGGCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LKPHLTEACSLRVNSPRSLKASL*ASWLGP Trigger: GGGACCCAGCCAAGAAGCCAACAGCGAGGCTTTCAG...ACTTCTGGGAGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | ATTCGGTGTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCGAGCAGCCGTCCCGGTaGAAGATCACCCGGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IRCRALYPSKTSSHRSMFEQPSR*KITRAI Trigger: AATGGCCCGGGTGATCTTCAACCGGGACGGCTGCTC...GAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | ATTCGGTGTAGAGCTTTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCAGTCAGTCAGCGGCCTaGGCCAAGAGGACGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IRCRALYPSKTSSHRSMFSQSAA*AKRTEN Trigger: GTTCTCCGTCCTCTTGGCCAAGGCCGCTGACTGACT...GAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
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| CDS-3UTR CAA 90 bp | CAGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAACAGGTAAGCTGTCCTTaGAAGTTCCTCCTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLLVIAVPGKLSFEVPPEQVSCP*KFLLKA Trigger: AGCTTTCAGGAGGAACTTCAAAGGACAGCTTACCTG...TTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | ATAACAAAAAGACATCCAGGAAACAGCTCCTTGTCATTGCTGTGCCAGGTAAGCCCAGGAAACAGCTCCTaGTCATTGCTGTGCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ITKRHPGNSSLSLLCQVSPGNSS*SLLCQV Trigger: TACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGG...GCTTACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGGATGTCTTTTTGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | TGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTGATCACCCGGGCCATTaGAAAACTGCGGAGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: CILLKPHLTEACSLRVNSDHPGH*KTAEGI Trigger: TATGCCCTCCGCAGTTTTCAAATGGCCCGGGTGATC...AGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | ATAACAAAAAGACATCCAGGAAACAGCTCCTTGTCATTGCTGTGCCAGGTAAGCAACAGCTCCTTGTCATaGCTGTGCCAGGTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ITKRHPGNSSLSLLCQVSNSSLS*LCQVSC Trigger: ACAGCTTACCTGGCACAGCAATGACAAGGAGCTGTT...GCTTACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGGATGTCTTTTTGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAATCCACTCTCTCTTTGTaGAACCAAATATTCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSLLCQVSCPLKFLLKSTLSL*NQIFPC Trigger: GCAGGGGAATATTTGGTTCAACAAAGAGAGAGTGGA...TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | CTCTATTTTTATTACTCATCACACATAACAGGCCCACATTGCTATTTTCTGAAGCTGAAAGCCTCGCTGTaGGCTTCTTGGCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYFYYSSHITGPHCYFLKLKASL*ASWLGP Trigger: GGGACCCAGCCAAGAAGCCAACAGCGAGGCTTTCAG...CTTCAGAAAATAGCAATGTGGGCCTGTTATGTGTGATGAGTAATAAAAATAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | TGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCATGGATTTCTAGCTTaGGAGAGGAGGCAAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CILLKPHLTEACSLRVNSHGFLA*ERRQGC Trigger: ACACCCTTGCCTCCTCTCCAAAGCTAGAAATCCATG...AGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | TTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCCTCTTCAAACACAACTaGACAAGGCCACGTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LYPSKTSSHRSMFSQGEFLFKHN*TRPRGI Trigger: GATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAG...GAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTTGTCATTGCTGTGCCAGGTAAGCTGTCCTTTGAAGTTCCTCCTGAAACATAACAGGCCCACATaGCTATTTTCTGAAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSLLCQVSCPLKFLLKHNRPT*LFSEVL Trigger: TAAAACTTCAGAAAATAGCAATGTGGGCCTGTTATG...TTTCAGGAGGAACTTCAAAGGACAGCTTACCTGGCACAGCAATGACAAGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATCCTTCTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTTGACAGTCCTGGGTTaGGCTTTTCATCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYPSKTSSHRSMFSQGEFLTVLG*AFHHPK Trigger: CTTTGGATGATGAAAAGCCAAACCCAGGACTGTCAA...GAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | CTAAAACCTCATCTCACAGAAGCATGTTCTCTCAGGGTGAATTCTCCCAGAAGTCGCTGTTATTTTAGATaGTCCAAATGTTCCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKPHLTEACSLRVNSPRSRCYFR*SKCSFH Trigger: GTGGAAGGAACATTTGGACAATCTAAAATAACAGCG...ACTTCTGGGAGAATTCACCCTGAGAGAACATGCTTCTGTGAGATGAGGTTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | TATAAGAGGTTTATTAAGGAAAGGCTCCCAGAGACACCAGTAAATAAATGGGAGGTGGGTGGTGCACATTaGTTACCTTCTCACCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YKRFIKERLPETPVNKWEVGGAH*LPSHLS Trigger: TGAAAGGTGAGAAGGTAACAAATGTGCACCACCCAC...CTCCCATTTATTTACTGGTGTCTCTGGGAGCCTTTCCTTAATAAACCTCTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS-3UTR CAA 90 bp | ATAACAAAAAGACATCCAGGAAACAGCTCCTTGTCATTGCTGTGCCAGGTAAGCAATTCCACTCTCTCTTaGTTGAACCAAATATTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITKRHPGNSSLSLLCQVSNSTLS*LNQIFP Trigger: GGGGAATATTTGGTTCAACAAAGAGAGAGTGGAATT...GCTTACCTGGCACAGCAATGACAAGGAGCTGTTTCCTGGATGTCTTTTTGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378979.8 |
||
| CDS-3UTR CAA 90 bp | TATAAGAGGTTTATTAAGGAAAGGCTCCCAGAGACACCAGTAAATAAATGGGAGATTCGGTGTAGAGCTTaGTATCCTTCTAAAACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YKRFIKERLPETPVNKWEIRCRA*YPSKTS Trigger: TGAGGTTTTAGAAGGATACAAAGCTCTACACCGAAT...CTCCCATTTATTTACTGGTGTCTCTGGGAGCCTTTCCTTAATAAACCTCTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS GCA 72 bp | ACTGCTGGTCATGGCACAGCACCTCCATTACTACCCTaGACACTGCCCGGCACCAGTTACAGGTCTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: TAGHGTAPPLLP*TLPGTSYRSFI Trigger: AATGAAAGACCTGTAACTGGTGCCGGGCAGTGTGCAGGGTAGTAATGGAGGTGCTGTGCCATGACCAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303142.11 |
||
| CDS CAA 90 bp | GAAGACGGAGGTTGCAGTGAGCTGAGATTGTCATTGTACTCCAGCTaGGGCTACAAGAGTGAGACTCCATCTCTCCTCCAAAGCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EDGGCSELRLSLYSS*GYKSETPSLLQSTP Trigger: TGGAGTGCTTTGGAGGAGAGATGGAGTCTCACTCTTGTAGCCCAAGCTGGAGTACAATGACAATCTCAGCTCACTGCAACCTCCGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442185.1 |
||
| CDS GCA 72 bp | TCCCAACACTTTGGGAAGCTGATGGAAGACGGAGGTTaGAGTGAGCTGAGATTGTCATTGTACTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQHFGKLMEDGG*SELRLSLYSSL Trigger: CAAGCTGGAGTACAATGACAATCTCAGCTCACTGCAACCTCCGTCTTCCATCAGCTTCCCAAAGTGTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442185.1 |
||
| CDS CAA 72 bp | AAGCTGATGGAAGACGGAGGTTGCAGTGAGCTGAGATaGTCATTGTACTCCAGCTTGGGCTACAAGAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KLMEDGGCSELR*SLYSSLGYKSE Trigger: CTCACTCTTGTAGCCCAAGCTGGAGTACAATGACAATCTCAGCTCACTGCAACCTCCGTCTTCCATCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442185.1 |
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