RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHKBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160410

Ensembl transcript IDs: ENST00000291842.10, ENST00000593764.5, ENST00000594298.5, ENST00000594862.1, ENST00000594973.5, ENST00000595523.5, ENST00000595631.5, ENST00000595726.1, ENST00000595803.5, ENST00000595874.1, ENST00000595945.5, ENST00000596163.5, ENST00000597325.1, ENST00000597396.5, ENST00000597649.5, ENST00000598201.5, ENST00000598558.5, ENST00000598907.5, ENST00000599575.5, ENST00000599716.5, ENST00000599833.1, ENST00000600320.5, ENST00000600552.5, ENST00000600718.5, ENST00000600733.5, ENST00000600791.5, ENST00000602011.5, ENST00000602239.1

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCG +
Preference number: 1 (lower is better)
Translates to: EGSAETAGGPRGWCG*PSEVWPTPHQFLAA
Trigger: CGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR CCA 90 bp GGGAGGTGTGAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGGGCTaGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTC +
Preference number: 1 (lower is better)
Translates to: GRCEGSAETAGGPRG*CGWPSEVWPTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTCACACCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR TCA 90 bp ATCGTGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAAC +
Preference number: 1 (lower is better)
Translates to: IVLLRRTGAGRPPSC*GPTRLCRFRRFTGN
Trigger: GTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR CCA 90 bp GGGAGGCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTT +
Preference number: 1 (lower is better)
Translates to: GRHLSPPGPGHPKAS*QLRCSKGSFIELHL
Trigger: AAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR GCA 90 bp CCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 2 (lower is better)
Translates to: PRGWCGWPSEVWPTPHQFSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR TCA 90 bp GCCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ATGLVWVAVGGLAHSAPVLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...AACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR CCA 90 bp CAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCCTTCATGGAGGAGGCTaGAACCGTGGACACCCGTGG +
Preference number: 2 (lower is better)
Translates to: QGLAVLLAAEAPLGCAGSLHGGG*NRGHPW
Trigger: CCACGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...GGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595803.5
3UTR-3UTR TCA 90 bp CCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: PSEVWPTPHQFLAAFHKANQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...AGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR TCA 90 bp TGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: WPSEVWPTPHQFLAAFHKGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...TTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR TCA 90 bp CAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCGACGAACCAGAGGAGTaGGCCCATAGAACTGGGCTT +
Preference number: 2 (lower is better)
Translates to: QGLAVLLAAEAPLGCAGSDEPEE*AHRTGL
Trigger: AAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTC...GGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR-3UTR CCA 90 bp CACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGAGGAGGCTGGAACCGTaGACACCCGTGGACATTCAG +
Preference number: 2 (lower is better)
Translates to: HTRRTIPGSSGCPEGEGGRRLEP*TPVDIQ
Trigger: CTGAATGTCCACGGGTGTCCACGGTTCCAGCCTCCT...CCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595803.5
3UTR-3UTR GCA 90 bp GGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 2 (lower is better)
Translates to: GVFSSSIRPSSPALPRLGGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...CCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR-3UTR CCA 90 bp GTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 2 (lower is better)
Translates to: VGQGLAVLLAAEAPLGCAHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...GGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR CAA 90 bp CATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTaGGGAGGTGTGAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGG +
Preference number: 2 (lower is better)
Translates to: HGSCVVQKEVSLSFI*GGVRGVPRPLEGHG
Trigger: CCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: GGDLVTITIYSKEALALNNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
3UTR-3UTR TCA 90 bp GGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 2 (lower is better)
Translates to: GVFSSSIRPSSPALPRLGAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...CCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR-3UTR TCA 90 bp CTAGAAACTGGGTATAGGCCACAGCGATCCAATTATGGTGTCCACACACCAGGCCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LETGYRPQRSNYGVHTPGRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...GCCTGGTGTGTGGACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
3UTR-3UTR TCA 90 bp AGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 2 (lower is better)
Translates to: RGFLIQHSAQQPCIAKVGAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...CCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR-3UTR CCA 90 bp AGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTTGGGAGGTGTGAGGGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SCVVQKEVSLSFILGGVRATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...CCTCACACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR CCA 90 bp GATCCAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 2 (lower is better)
Translates to: DPIMVSTHQAHHPRLLRLLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...CAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
3UTR-3UTR TCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
3UTR-3UTR CCA 90 bp ACCTGTAGCAGACTAGAAACTGGGTATAGGCCACAGCGATCCAATTATGGTGTCCTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 2 (lower is better)
Translates to: TCSRLETGYRPQRSNYGVLHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...GACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTCTAGTCTGCTACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599575.5
3UTR-3UTR CCA 90 bp ACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCAGAGGAGTAACCGTGGACACCCGTaGACATTCAGAGGAGGTGAA +
Preference number: 2 (lower is better)
Translates to: TRRSIQLLSKLQATNQRSNRGHP*TFRGGE
Trigger: TTCACCTCCTCTGAATGTCCACGGGTGTCCACGGTT...ACTCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595803.5
3UTR-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
3UTR-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
3UTR-3UTR CCA 90 bp CCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCCTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 2 (lower is better)
Translates to: PRHHGSCVVQKEVSLSFILGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...GATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR-3UTR CCA 90 bp CTTCACTGGGAACACTGGTGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACAAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGA +
Preference number: 2 (lower is better)
Translates to: LHWEHWWRQVTIEEDVSTNRGHP*VVELTR
Trigger: TCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTT...TGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595523.5
ENST00000599575.5
3UTR-3UTR CCA 90 bp AGCAGACTAGAAACTGGGTATAGGCCACAGCGATCCAATTATGGTGTCCACACAAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGA +
Preference number: 2 (lower is better)
Translates to: SRLETGYRPQRSNYGVHTNRGHP*VVELTR
Trigger: TCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTT...TGTGTGGACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTCTAGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599575.5
3UTR CCA 72 bp GAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGGGCTaGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCG +
Preference number: 3 (lower is better)
Translates to: EGSAETAGGPRG*CGWPSEVWPTP
Trigger: CGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR CCA 72 bp GCCGAGACCGCTGGAGGGCCACGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTC +
Preference number: 3 (lower is better)
Translates to: AETAGGPRGWCG*PSEVWPTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR CCA 72 bp GAGTGCCGAGACCGCTGGAGGGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCA +
Preference number: 3 (lower is better)
Translates to: ECRDRWRATGLV*VAVGGLAHSAP
Trigger: TGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR TCA 72 bp CTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTC +
Preference number: 3 (lower is better)
Translates to: LRRTGAGRPPSC*GPTRLCRFRRF
Trigger: GAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
3UTR CCA 72 bp GGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTGCCCCCACCACGGCGC +
Preference number: 3 (lower is better)
Translates to: GRRRSGPLRTSS*QRSTKLPPPRR
Trigger: GCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR TCA 72 bp CATGTTCACCCAAAGCCCCACCATGCACCCGGGCTGTaGGCGCCAGTCGTTCGATGGGCCAGTCCAGGCGGG +
Preference number: 3 (lower is better)
Translates to: HVHPKPHHAPGL*APVVRWASPGG
Trigger: CCCGCCTGGACTGGCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595945.5
3UTR CCA 72 bp CCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCCGTCGGACAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: PAFGPAALHCQG*GASCCSVGQGL
Trigger: CAGCCCCTGTCCGACGGAGCAACACGATGCCCCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
3UTR CCA 72 bp CTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAG +
Preference number: 3 (lower is better)
Translates to: LSPPGPGHPKAS*QLRCSKGSFIE
Trigger: CTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR GCA 72 bp CCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATC +
Preference number: 3 (lower is better)
Translates to: PQDQGIPRHHGS*VVQKEVSLSFI
Trigger: GATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
3UTR TCA 72 bp GCTTCACTGGGAACACTGGTGGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAGAAGATCGATCCAACT +
Preference number: 3 (lower is better)
Translates to: ASLGTLVAAGNH*RGRFHKKIDPT
Trigger: AGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGCGTTGGCCTGGCCAGTaGGCAGGTAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRRWPGQ*AGSAGA
Trigger: GGCCCCGGCGCTACCTGCTCACTGGCCAGGCCAACG...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ATGLVWVAVGGLAHSAPVSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...AACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPPGAAR*PARPLS
Trigger: GCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCGGGGACCCCCTCGGCTaGAGTAGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPTRLCRFRRFTGNTGGGGDPLG*SSRCCH
Trigger: ATGGCAGCAGCGGCTACTGCAGCCGAGGGGGTCCCC...GCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGCGCCAGTCGTTCGATaGGCCAGTCCAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPAPVVR*ASPGGG
Trigger: GCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TCGTGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCAGCGCCAGTCGTTCGATaGGCCAGTCCAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SCCSVGQGLAVLLAAEAPAPVVR*ASPGGG
Trigger: GCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGC...TGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EVWPTPHQFLAAFHKAAPRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...GGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGACCCGCACGCCCCCTaGGCTGGTGCCATAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRDPHAP*AGAIGD
Trigger: ATCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALPGAAR*PARPLS
Trigger: GCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TGTGAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGGGCTGGTGTGGGTGGCCGCCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CEGSAETAGGPRGWCGWPPLPSR*ETHEEL
Trigger: CAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGG...CGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCGTCAGGCCACCGCTaGCCAGTAGATGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: ATGLVWVAVGGLAHSAPVPSGHR*PVDERR
Trigger: GCGTCTCTCATCTACTGGGCAGCGGTGGCCTGACGG...AACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGCGCCAGTCGTTCGATaGGCCAGTCCAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPAPVVR*ASPGGG
Trigger: GCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPGVEPG*VEIMPR
Trigger: CCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: EVWPTPHQFLAAFHKAAPATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...GGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp GAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EVWPTPHQFLAAFHKAAPECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...GGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR TCA 90 bp ACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TPGAPSPAPQVVLRVREGRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...CCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: VGGRRRSGPLRTSSWQRSSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...GGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp TCGTGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCAGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: SCCSVGQGLAVLLAAEAPGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...TGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACAGTCTCCGGGTGCTaGACGATGACCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPTVSGC*TMTRTP
Trigger: GGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCACCACGGCGCCTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: HSAPVPGSVPQSCPHHGAWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...GGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ATGCACCCGGGCTGTGAGCGCCAGTCGTTCGATGGGCCAGTCCAGGCGGGGGCTCCACATTCAGATGAATaGCTTCCCCGGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MHPGCERQSFDGPVQAGAPHSDE*LPREAP
Trigger: GGGGGCCTCCCGGGGAAGTCATTCATCTGAATGTGG...AGCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACATGCACCCGGGCTGTaGGCGCCAGTCGTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPHAPGL*APVVRW
Trigger: CCATCGAACGACTGGCGCTCACAGCCCGGGTGCATG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGACATGCACCCGGGCTGTaGGCGCCAGTCGTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LLAAEAPLGCAGSAASLGHAPGL*APVVRW
Trigger: CCATCGAACGACTGGCGCTCACAGCCCGGGTGCATG...TCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599575.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGACCCGCACGCCCCCTaGGCTGGTGCCATAGGCGAT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALDPHAP*AGAIGD
Trigger: ATCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCGGCACAGACTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: ATGLVWVAVGGLAHSAPVRHRLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCG...AACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGAAGGCTGTCGTGGGTaGGCCGTCCACGGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALEGCRG*AVHGAH
Trigger: GTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTGCAGTAGCCGCTGCTaGCATGGCCCCCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCCSSRC*HGPRAS
Trigger: GCTCGCCCGGGGGCCATGGCAGCAGCGGCTACTGCA...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR GCA 90 bp CACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCACCACGGCGCCGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HSAPVPGSVPQSCPHHGAAAMPI*RLQSQD
Trigger: ATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGC...GGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTCTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQGLAVLLAAEAPLGCAGLHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...ACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGAGTCCAGGCGGGGGCTaGAAAACACCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPGAPSPAPQVVLRVREGSPGGG*KTPAAS
Trigger: GCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACT...CCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGAAGCGAGTGGGGTaGAGCCGGGCTGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPRKRVG*SRAGWK
Trigger: TTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRRRTKS*LALGTT
Trigger: GGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCT...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCACCACGGCGCCAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: HSAPVPGSVPQSCPHHGARRTKS*LALGTT
Trigger: GGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCT...GGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp CCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PRGWCGWPSEVWPTPHQFLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTCCTCCCACATTCAGATaGATGACTTCCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQGLAVLLAAEAPLGCAGPPTFR*MTSPGG
Trigger: GCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGG...ACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGCATGCACCCGGGCTGTaGGCGCCAGTCGTTCGATGG +
Preference number: 4 (lower is better)
Translates to: CPHTRRTIPGSSGCPEGEHAPGL*APVVRW
Trigger: CCATCGAACGACTGGCGCTCACAGCCCGGGTGCATG...CTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGAAGGCTGTCGTGGGTaGGCCGTCCACGGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCEGCRG*AVHGAH
Trigger: GTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCATCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGTCCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTTGCAGTAGCCGCTGCTaGCATGGCCCCCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: CPEGEGGVFSSSIRPSSPCSSRC*HGPRAS
Trigger: GCTCGCCCGGGGGCCATGGCAGCAGCGGCTACTGCA...AGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGTGCAGTAGCCGCTGCTaGCATGGCCCCCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GVFSSSIRPSSPALPRLGCSSRC*HGPRAS
Trigger: GCTCGCCCGGGGGCCATGGCAGCAGCGGCTACTGCA...CCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGTGCACCTCCTGGACCTaGCAGTGCTTGGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRCTSWT*QCLVTA
Trigger: TGCCGTCACCAAGCACTGGCAGGTCCAGGAGGTGCA...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGACAGTCTCCGGGTGCTaGACGATGACCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALTVSGC*TMTRTP
Trigger: GGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCGTGACAGGGCTGCGGTaGACAGTGAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VGGRRRSGPLRTSSWQRSVTGLR*TVKVWK
Trigger: CTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCAC...GGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPAAMPI*RLQSQD
Trigger: ATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPALQPP*PSADSR
Trigger: TCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCAGGGGCCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: VGGRRRSGPLRTSSWQRSRGQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCT...GGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCTCAGGCCACCTGCGCTaGCCAGTAGATGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPSGHLR*PVDERR
Trigger: GCGTCTCTCATCTACTGGGCAGCGCAGGTGGCCTGA...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595726.1
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACCGTCAGGCCACCGCTaGCCAGTAGATGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPPSGHR*PVDERR
Trigger: GCGTCTCTCATCTACTGGGCAGCGGTGGCCTGACGG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594862.1
CDS-3UTR CCA 90 bp ACCCAAAGCCCCACCATGCACCCGGGCTGTGAGCGCCAGTCGTTCGATGGGCCAAGTCCAGGCGGGGGCTaGAAAACACCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TQSPTMHPGCERQSFDGPSPGGG*KTPAAS
Trigger: GCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACT...TGGCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCGVEPG*VEIMPR
Trigger: CCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTACCACATTCAGATGAATaGCTTCCCCGGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CCSVGQGLAVLLAAEAPLPHSDE*LPREAP
Trigger: GGGGGCCTCCCGGGGAAGTCATTCATCTGAATGTGG...TAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGCCTCCCACATTCAGATaGATGACTTCCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRPPTFR*MTSPGG
Trigger: GCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGG...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGAGTCTGGGATCCAGGTaGGAGTCTGGCGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRSLGSR*ESGERY
Trigger: GTACCTCTCGCCAGACTCTCACCTGGATCCCAGACT...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGAGTCTGGGATCCAGGTaGGAGTCTGGCGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: TPGAPSPAPQVVLRVREGSLGSR*ESGERY
Trigger: GTACCTCTCGCCAGACTCTCACCTGGATCCCAGACT...CCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGTCTGGGATCCAGGTaGGAGTCTGGCGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPSLGSR*ESGERY
Trigger: GTACCTCTCGCCAGACTCTCACCTGGATCCCAGACT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCCGGCACAGACTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPRHRLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCG...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCGCACTCCAGCACTGTaGAGGCTGTCGTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALRTPAL*RLSWVS
Trigger: GCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCAGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: PEGEGGVFSSSIRPSSPAGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...TGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCCAAAGCCCCACCATaGACCCGGGCTGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: EGEGGVFSSSIRPSSPALPKAPP*TRAVSA
Trigger: GGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGG...CAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTACAGTCTCCGGGTGCTaGACGATGACCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCTVSGC*TMTRTP
Trigger: GGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCCCACAGTCTCCGGGTaGTGCACGATGACCCGCACG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCPTVSG*CTMTRT
Trigger: CGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGTGACAGGGCTGCGGTaGACAGTGAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPVTGLR*TVKVWK
Trigger: CTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCAC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGCTGGGTGGAAATCATaGCGCGGAAGCGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRAGWKS*RGSESQ
Trigger: CTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALAAMPI*RLQSQD
Trigger: ATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSEVWPTPHQFLAAFHKAALQPP*PSADSR
Trigger: TCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGC...AGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALALQPP*PSADSR
Trigger: TCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCACCACGGCGCCTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: HSAPVPGSVPQSCPHHGACHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...GGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPCHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGGCCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPRGQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGGGCATCGTGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGCTGCAGGCGACGAACTaGAACAGGAGGACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GASCCSVGQGLAVLLAAELQATN*NRRTRG
Trigger: TCCTCTGGTCCTCCTGTTGCAGTTCGTCGCCTGCAG...CTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGATGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGAGTCCAGGCGGGGGCTaGAAAACACCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALSPGGG*KTPAAS
Trigger: GCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGACCCCATCCTCCGCTaGGTCCCGATAGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALDPILR*VPIELA
Trigger: AGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGAGGAAGCGAGTGGGGTaGAGCCGGGCTGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALRKRVG*SRAGWK
Trigger: TTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPLGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCAGGTCTTCATGGAGGAGGCTaGAACCGTGGACACCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLGCAGSAASLGTLVAAGLHGGG*NRGHPW
Trigger: CCACGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...ACCTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595803.5
CDS-3UTR TCA 90 bp CTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAAGTCTGGGATCCAGGTaGGAGTCTGGCGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLAAEAPLGCAGSAASLGSLGSR*ESGERY
Trigger: GTACCTCTCGCCAGACTCTCACCTGGATCCCAGACT...TCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAACAGGCACCCCCAGATaGAAGACCCCTATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPTGTPR*KTPISE
Trigger: CTCCGAGATAGGGGTCTTTCATCTGGGGGTGCCTGT...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600718.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTAAGGTCTGGAAGAGCTaGGGCCCCGAGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCKVWKS*GPEPTV
Trigger: GACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGGCTGCGGTGCACAGTaGAGGTCTGGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALGCGAQ*RSGRAE
Trigger: CTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000596163.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCGCACTCCAGCACTGTaGAGGCTGTCGTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCRTPAL*RLSWVS
Trigger: GCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGGGGACCCCCTCGGCTaGAGTAGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RGFLIQHSAQQPCIAKVGGDPLG*SSRCCH
Trigger: ATGGCAGCAGCGGCTACTGCAGCCGAGGGGGTCCCC...CCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GGGGCATCGTGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GASCCSVGQGLAVLLAAELSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...CTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGATGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: GEGGVFSSSIRPSSPALPGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...TGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCALQPP*PSADSR
Trigger: TCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCATGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPCHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCTTCTGGATGAACACTTaGTGGTCGTCCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPFWMNT*WSSRSP
Trigger: CGGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAA...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTGTCCGCTCAGAAGACTaGAGAAGAAGGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQGLAVLLAAEAPLGCAGVRSED*RRRSLG
Trigger: TCCCAGACTCCTTCTTCTCCAGTCTTCTGAGCGGAC...ACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAACCGTGGACACCCCTaGGATCCAACTCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPNRGHP*DPTLWC
Trigger: GCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: QGLAVLLAAEAPLGCAGSLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...GGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp TGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTACTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CCSVGQGLAVLLAAEAPLLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...TAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPDHVRT*LLSAQT
Trigger: AGTCTGTGCCGACAACAACCACGTGCGGACATGGTC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTAGGAAGCGAGTGGGGTaGAGCCGGGCTGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCRKRVG*SRAGWK
Trigger: TTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCACAAACTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WPSEVWPTPHQFLAAFHKLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...TTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALLGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCAACCGTGGACACCCGTaGACATTCAGAGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GPTRLCRFRRFTGNTGGGNRGHP*TFRGGE
Trigger: TTCACCTCCTCTGAATGTCCACGGGTGTCCACGGTT...GCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595803.5
CDS-3UTR TCA 90 bp ACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGTTGACGAACCAGAGGAGTaGGCCCATAGAACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TRRTIPGSSGCPEGEGGVDEPEE*AHRTGL
Trigger: AAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTC...AACCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp ACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: TPGAPSPAPQVVLRVREGAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...CCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp AGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGFLIQHSAQQPCIAKVGRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...CCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: APQVVLRVREGFSHPAFGRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...GCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACAACCTGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGGCTGCGGTGCACAGTaGAGGTCTGGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCGCGAQ*RSGRAE
Trigger: CTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000596163.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCGACATTCAGAGGAGGTaGAAGAACTCCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: QGLAVLLAAEAPLGCAGSDIQRR*KNSSGT
Trigger: AGTCCCTGAGGAGTTCTTTCACCTCCTCTGAATGTC...GGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595803.5
CDS-3UTR GCA 90 bp TGTTGCTCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAAACTCCTCTCGAAGCTaGAGGCGACGAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CCSVGQGLAVLLAAEAPLNSSRS*RRRTRG
Trigger: TCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTT...TAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GATCCAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: DPIMVSTHQAHHPRLLRLGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...CAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAAAATGGAGCCGTTGTTaGAGCCCAGGAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPKWSRC*SPGGGR
Trigger: CCTTCCTCCTCCTGGGCTGCAACAACGGCTCCATTT...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGTGACAGGGCTGCGGTaGACAGTGAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALVTGLR*TVKVWK
Trigger: CTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCAC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000596163.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALCHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTACGGAGCACACCCGCTaGCCAGTAGATGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCTEHTR*PVDERR
Trigger: GCGTCTCTCATCTACTGGGCAGCGGGTGTGCTCCGT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGTGAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGGGCTGGTGTGGGTGGCCGAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: CEGSAETAGGPRGWCGWPRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...CGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp TCCGTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTAACTCCTCTCGAAGCTaGAGGCGACGAACTGCAACA +
Preference number: 4 (lower is better)
Translates to: SVGQGLAVLLAAEAPLGCNSSRS*RRRTAT
Trigger: TGTTGCAGTTCGTCGCCTGCAGCTTCGAGAGGAGTT...ACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR CCA 90 bp TCACCCAAAGCCCCACCATGCACCCGGGCTGTGAGCGCCAGTCGTTCGATGGGCAACCGTGGACACCCCTaGGATCCAACTCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPKAPPCTRAVSASRSMGNRGHP*DPTLWC
Trigger: GCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTT...GCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR CCA 90 bp GGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGGGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GFSHPAFGPAALHCQGWGVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...CCCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GTTGTCCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VVLRVREGFSHPAFGPAAVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...GGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACAGCGATCCAATTATaGTGTCCACACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPTAIQL*CPHTRR
Trigger: GCGCCTGGTGTGTGGACACCATAATTGGATCGCTGT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCAGGTGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: PLGCAGSAASLGTLVAAGAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...ACCTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNPGAAR*PARPLS
Trigger: GCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAPGAAR*PARPLS
Trigger: GCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGPGAAR*PARPLS
Trigger: GCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCGGCACAGACTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCRHRLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCGTTGGCCTGGCCAGTaGGCAGGTAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNRWPGQ*AGSAGA
Trigger: GGCCCCGGCGCTACCTGCTCACTGGCCAGGCCAACG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCAGAGGAGGGGGACCCCCTCGGCTaGAGTAGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HKKIDPTPLEAAGDEPEEGDPLG*SSRCCH
Trigger: ATGGCAGCAGCGGCTACTGCAGCCGAGGGGGTCCCC...CTCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALLSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCCTGGACCTGCCAGTaGTTGGTGACGGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCSWTCQ*LVTAFH
Trigger: GTGGAATGCCGTCACCAAGCACTGGCAGGTCCAGGA...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGAAATGGAGCCGTTGTTaGAGCCCAGGAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALKWSRC*SPGGGR
Trigger: CCTTCCTCCTCCTGGGCTGCAACAACGGCTCCATTT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGTGACAGGGCTGCGGTaGACAGTGAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCVTGLR*TVKVWK
Trigger: CTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCAC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000596163.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACTCCGCACCAGTTCCTGGCAGCGTTCCACAAAGCTGCCCCCACCACGGCGCCCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: HSAPVPGSVPQSCPHHGAQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...GGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGCTGGGTGGAAATCATaGCGCGGAAGCGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCAGWKS*RGSESQ
Trigger: CTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCCHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTCCGTCAGGCCACCTaGAGGGGCCTGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALRQAT*RGLAEA
Trigger: GGCCTCGGCCAGGCCCCTGCAGGTGGCCTGACGGAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTGGCCACCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCGHQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGGTGGCC...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593764.5
CDS-3UTR CCA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGTCCGCTCAGAAGACTaGAGAAGAAGGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LALNPGFPQESGRHLSPPVRSED*RRRSLG
Trigger: TCCCAGACTCCTTCTTCTCCAGTCTTCTGAGCGGAC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TCACCCAAAGCCCCACCATGCACCCGGGCTGTGAGCGCCAGTCGTTCGATGGGCGTCCGCTCAGAAGACTaGAGAAGAAGGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SPKAPPCTRAVSASRSMGVRSED*RRRSLG
Trigger: TCCCAGACTCCTTCTTCTCCAGTCTTCTGAGCGGAC...GCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR CCA 90 bp ACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGTTCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: TRRTIPGSSGCPEGEGGVLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...AACCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QLWCPHTRRTIPGSSGCPVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...AGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAACAGCGATCCAATTATaGTGTCCACACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLAAEAPLGCAGSAASLGTAIQL*CPHTRR
Trigger: GCGCCTGGTGTGTGGACACCATAATTGGATCGCTGT...TCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALDHVRT*LLSAQT
Trigger: AGTCTGTGCCGACAACAACCACGTGCGGACATGGTC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCCACCTGCAGGGGCCTaGCCGAGGCCGTCCATGGCG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNPPAGA*PRPSMA
Trigger: CGCCATGGACGGCCTCGGCCAGGCCCCTGCAGGTGG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGACTAGAGGTCAGGGTCTaGGATCCAACTCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLAAEAPLGCAGSAASLGLEVRV*DPTLWC
Trigger: GCACCAAAGAGTTGGATCCCAGACCCTGACCTCTAG...TCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599575.5
CDS-3UTR TCA 90 bp GAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGCCTCCCACATTCAGATaGATGACTTCCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGGVFSSSIRPSSPALPRPPTFR*MTSPGG
Trigger: GCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGG...CCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCAGGTAACCATTCTGGCGAGAGGTACTaGATCTCTTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: GCAGSAASLGTLVAAGNHSGERY*ISCLPH
Trigger: ATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGA...ATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCAGAGGAGCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HKKIDPTPLEAAGDEPEERPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...CTCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCCCGATAGAGCTCGCTaGCAAGGAGGTCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCPDRAR*QGGRCL
Trigger: AAGACAACGACCTCCTTGTCAGCGAGCTCTATCGGG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGCTTTATTGGGGAGGGTaGCTTTGGCTTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRLYWGG*LWLPEK
Trigger: CTTTTCTGGAAGCCAAAGTCACCCTCCCCAATAAAG...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGGTCTGGCGAGAGGTACTaGATCTGGGCGGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GFSHPAFGPAALHCQGWGSGERY*IWAGKV
Trigger: TACCTTCCCCGCCCAGATTCAGTACCTCTCGCCAGA...CCCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTGCAGTAGCCGCTGCTaGCATGGCCCCCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGCSSRC*HGPRAS
Trigger: GCTCGCCCGGGGGCCATGGCAGCAGCGGCTACTGCA...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCACCTGCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCHLQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS-3UTR CCA 90 bp GGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCAGGTAACCATGTCCGCTCAGAAGACTaGAGAAGAAGGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GCAGSAASLGTLVAAGNHVRSED*RRRSLG
Trigger: TCCCAGACTCCTTCTTCTCCAGTCTTCTGAGCGGAC...ATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTAACCGTGGACACCCCTaGGATCCAACTCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCNRGHP*DPTLWC
Trigger: GCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCTCCTCAGGTTGTCCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: APQVVLRVREGFSHPAFGLHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...GCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACAACCTGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGGCAGGTAACCATCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: GCAGSAASLGTLVAAGNHHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...ATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGACAGCGATCCAATTATaGTGTCCACACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALTAIQL*CPHTRR
Trigger: GCGCCTGGTGTGTGGACACCATAATTGGATCGCTGT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: PGPEPGVPTGIREAPESPHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTGCAGGCGACGAACCAGAGGAGTGAGCCCATAGAACTGGGCTTCATGGAGGAGAGTCTGGGATCCAGGTaGGAGTCTGGCGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LQATNQRSEPIELGFMEESLGSR*ESGERY
Trigger: GTACCTCTCGCCAGACTCTCACCTGGATCCCAGACT...CTCCTCCATGAAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTCGCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCGACCCGCACGCCCCCTaGGCTGGTGCCATAGGCGAT +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGDPHAP*AGAIGD
Trigger: ATCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTC...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPGHPKASWQLRCSKGSGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...ACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp CCATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCTGCAGTAGCCGCTGCTaGCATGGCCCCCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PLKRTFPQEDRSNSSRSCCSSRC*HGPRAS
Trigger: GCTCGCCCGGGGGCCATGGCAGCAGCGGCTACTGCA...GCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCCCAAAGCCCCACCATaGACCCGGGCTGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNPKAPP*TRAVSA
Trigger: GGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GPEPGVPTGIREAPESPRRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CATCTTGTCATGTTCACCCAAAGCCCCACCATGCACCCGGGCTGTGAGCGCCAGTCTGGCGAGAGGTACTaGATCTCTTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: HLVMFTQSPTMHPGCERQSGERY*ISCLPH
Trigger: ATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGA...CTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATGACAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALANQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RTRASQGIMAAALFKRKFNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...AAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCACAGTCTCCGGGTGCTaGACGATGACCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALATVSGC*TMTRTP
Trigger: GGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGT...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCCACAGTCTCCGGGTaGTGCACGATGACCCGCACG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGPTVSG*CTMTRT
Trigger: CGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCCCACAGTCTCCGGGTaGTGCACGATGACCCGCACG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNPTVSG*CTMTRT
Trigger: CGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCTCCGTCAGGCCACCTaGAGGGGCCTGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPLRQAT*RGLAEA
Trigger: GGCCTCGGCCAGGCCCCTGCAGGTGGCCTGACGGAG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR CCA 90 bp GTTGTCCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCGTCCGCTCAGAAGACTaGAGAAGAAGGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VVLRVREGFSHPAFGPAAVRSED*RRRSLG
Trigger: TCCCAGACTCCTTCTTCTCCAGTCTTCTGAGCGGAC...GGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: EGGVFSSSIRPSSPALPRHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...CCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CACTGGGAACACTGGTGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACAAGAGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HWEHWWRQVTIEEDVSTRVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...TCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp ATCCAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: IQLWCPHTRRTIPGSSGCLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...ACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGACAGCGATCCAATTATaGTGTCCACACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: EGGVFSSSIRPSSPALPRTAIQL*CPHTRR
Trigger: GCGCCTGGTGTGTGGACACCATAATTGGATCGCTGT...CCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp ATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGCCAGTCGTTCGATaGGCCAGTCCAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: IEEDVSTRRSIQLLSKLQAPVVR*ASPGGG
Trigger: GCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGC...CTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599575.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCGGCCGAGGCCGTCCATaGCGGTGGTTAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAGRGRP*RWLGPT
Trigger: TGTGGGACCTAACCACCGCCATGGACGGCCTCGGCC...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CAGGTTGTCCTGAGGGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCATCTGGCGAGAGGTACTaGATCTCTTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: QVVLRVREGFSHPAFGPASGERY*ISCLPH
Trigger: ATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGA...TGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACAAGGTCTGGAAGAGCTaGGGCCCCGAGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNKVWKS*GPEPTV
Trigger: GACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTT...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTTTATTGGGGAGGGTaGCTTTGGCTTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLYWGG*LWLPEK
Trigger: CTTTTCTGGAAGCCAAAGTCACCCTCCCCAATAAAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ATCCAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: IQLWCPHTRRTIPGSSGCLSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...ACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR GCA 90 bp CCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTCAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGPGHPKASWQLRCSKGSQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...ACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: APESPRTRASQGIMAAALRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTCACTGGGAACACTGGTGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACACTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LHWEHWWRQVTIEEDVSTLHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...TGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595523.5
ENST00000599575.5
CDS-3UTR CCA 90 bp CAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: QLWCPHTRRTIPGSSGCPLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...AGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACGTTCCGCCGCTTCACTaGGAACACTGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNVPPLH*EHWWRQ
Trigger: CTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAAC...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALARRTKS*LALGTT
Trigger: GGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCT...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAAACTGGGTATAGGCCACAGCGATCCAATTATGGTGTCCACACACCAGGCGCAAGTCTGGGATCCAGGTaGGAGTCTGGCGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ETGYRPQRSNYGVHTPGASLGSR*ESGERY
Trigger: GTACCTCTCGCCAGACTCTCACCTGGATCCCAGACT...TGCGCCTGGTGTGTGGACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCGCGTCATAACTGGTaGTGGGCTGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGPRHNW*WAAPPG
Trigger: TCCAGGAGGTGCAGCCCATCACCAGTTATGACGCGG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCCGCGTCATAACTGGTaGTGGGCTGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAPRHNW*WAAPPG
Trigger: TCCAGGAGGTGCAGCCCATCACCAGTTATGACGCGG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYPGAAR*PARPLS
Trigger: GCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCGGCTGCGGTGCACAGTaGAGGTCTGGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGGCGAQ*RSGRAE
Trigger: CTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCC...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGPLPSR*ETHEEL
Trigger: CAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAPLPSR*ETHEEL
Trigger: CAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACGTTGGCCTGGCCAGTaGGCAGGTAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLRWPGQ*AGSAGA
Trigger: GGCCCCGGCGCTACCTGCTCACTGGCCAGGCCAACG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCGCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAALPSR*ETHEEL
Trigger: CAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGC...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595726.1
CDS-3UTR GCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCCCAAAGCCCCACCATaGACCCGGGCTGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPPKAPP*TRAVSA
Trigger: GGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTCGCTGCCGGTGGCTaGTGCCACCATCTTGTCATG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALAAGG*CHHLVM
Trigger: CATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTGCACCTCCTGGACCTaGCAGTGCTTGGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGCTSWT*QCLVTA
Trigger: TGCCGTCACCAAGCACTGGCAGGTCCAGGAGGTGCA...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGLHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACCACCTGCAGGGGCCTaGCCGAGGCCGTCCATGGCG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLPPAGA*PRPSMA
Trigger: CGCCATGGACGGCCTCGGCCAGGCCCCTGCAGGTGG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGLGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACGGGGCTGGTGTGGGTaGCCGTCGGAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLRGWCG*PSEVWP
Trigger: GGGCCAGACCTCCGACGGCCACCCACACCAGCCCCG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGCCACGGGGCTGGTGTaGGTGGCCGTCGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSATGLV*VAVGGL
Trigger: CAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATAGGCCACCAGGGGCCTaGCCGAGGCCGTCCATGGCG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYRPPGA*PRPSMA
Trigger: CGCCATGGACGGCCTCGGCCAGGCCCCTGGTGGCCT...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597396.5
CDS-3UTR CCA 90 bp CGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCAAGGAGGCTGGAACCGTaGACACCCGTGGACATTCAG +
Preference number: 4 (lower is better)
Translates to: RFHKKIDPTPLEAAGDEPRRLEP*TPVDIQ
Trigger: CTGAATGTCCACGGGTGTCCACGGTTCCAGCCTCCT...TGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595803.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTCCCACATTCAGATaGATGACTTCCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGPPTFR*MTSPGG
Trigger: GCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACGACGAACCAGAGGAGTaGGCCCATAGAACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: DVSTRRSIQLLSKLQATNDEPEE*AHRTGL
Trigger: AAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTC...GTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp ACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCAGAGGAGTGACGAACCAGAGGAGTaGGCCCATAGAACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TRRSIQLLSKLQATNQRSDEPEE*AHRTGL
Trigger: AAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTC...ACTCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: EDVSTRRSIQLLSKLQATAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...CGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACACAGGCACCCCCAGATaGAAGACCCCTATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNTGTPR*KTPISE
Trigger: CTCCGAGATAGGGGTCTTTCATCTGGGGGTGCCTGT...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600718.5
CDS-3UTR TCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGACCCGCACGCCCCCTaGGCTGGTGCCATAGGCGAT +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGDPHAP*AGAIGD
Trigger: ATCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTAATCAGGGAGGCACCTaGGTCCCCCAGGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPNQGGT*VPQDQG
Trigger: GCCCTGGTCCTGGGGGACTCAGGTGCCTCCCTGATT...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCAGAGGAGTAACGGACGCAAGAGATaGAGAGGAGCGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: TRRSIQLLSKLQATNQRSNGRKR*RGAGEE
Trigger: TTCCTCACCCGCTCCTCTTCATCTCTTGCGTCCGTT...ACTCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGGGGACCCCCTCGGCTaGAGTAGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGGDPLG*SSRCCH
Trigger: ATGGCAGCAGCGGCTACTGCAGCCGAGGGGGTCCCC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR GCA 90 bp GAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: EEDVSTRRSIQLLSKLQALSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...CGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp AGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAAACTCCTCTCGAAGCTaGAGGCGACGAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RTFPQEDRSNSSRSCRRRNSSRS*RRRTRG
Trigger: TCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTT...TCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCGCTGCCGGTGGCTGCTaGCACCATCTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGAAGGC*HHLVMF
Trigger: GAACATGACAAGATGGTGGCAGCAGCCACCGGCAGC...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTCCTGGACCTGCCAGTaGTTGGTGACGGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALASWTCQ*LVTAFH
Trigger: GTGGAATGCCGTCACCAAGCACTGGCAGGTCCAGGA...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTCCTGGACCTGCCAGTaGTTGGTGACGGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGSWTCQ*LVTAFH
Trigger: GTGGAATGCCGTCACCAAGCACTGGCAGGTCCAGGA...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTGCTGGGTGGAAATCATaGCGCGGAAGCGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: RTRASQGIMAAALFKRKFAGWKS*RGSESQ
Trigger: CTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGC...AAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALACHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACAGGGGCCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNRGQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCT...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTAGAAACTGGGTATAGGCCACAGCGATCCAATTATGGTGTCCACACACCAGGCCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LETGYRPQRSNYGVHTPGLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...GCCTGGTGTGTGGACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGAGTGCCGAGACCGCTaGAGGGCCACGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFECRDR*RATGLV
Trigger: CACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGA +
Preference number: 4 (lower is better)
Translates to: QLWCPHTRRTIPGSSGCPNRGHP*VVELTR
Trigger: TCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTT...AGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599575.5
CDS-3UTR TCA 90 bp CAGGTAACCATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGCCACATTCAGATGAATaGCTTCCCCGGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QVTIEEDVSTRRSIQLLSPHSDE*LPREAP
Trigger: GGGGGCCTCCCGGGGAAGTCATTCATCTGAATGTGG...CGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp TGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCCTCCCACATTCAGATaGATGACTTCCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: WRQVTIEEDVSTRRSIQLPPTFR*MTSPGG
Trigger: GCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGG...GAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGACCCGCACGCCCCCTaGGCTGGTGCCATAGGCGAT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLDPHAP*AGAIGD
Trigger: ATCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTAAGGTCTGGAAGAGCTaGGGCCCCGAGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPKVWKS*GPEPTV
Trigger: GACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTT...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGAAGGCTGTCGTGGGTaGGCCGTCCACGGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFEGCRG*AVHGAH
Trigger: GTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCTGAGTGGAGGCTGGTaGGGGAGATGCGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGLSGGW*GRCGVR
Trigger: CCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAG...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGGGGACCCCCTCGGCTaGAGTAGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKGDPLG*SSRCCH
Trigger: ATGGCAGCAGCGGCTACTGCAGCCGAGGGGGTCCCC...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCCCAAAGCCCCACCATaGACCCGGGCTGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYPKAPP*TRAVSA
Trigger: GGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTTCTGGATGAACACTTaGTGGTCGTCCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGFWMNT*WSSRSP
Trigger: CGGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAA...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTTCTGGATGAACACTTaGTGGTCGTCCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAFWMNT*WSSRSP
Trigger: CGGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAA...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATAGCGTTCCACAAAGCTaGCCCCACCACGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYSVPQS*PHHGAG
Trigger: CCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCT...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGCGACGAACCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: DVSTRRSIQLLSKLQATNLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...GTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGACCCCATCCTCCGCTaGGTCCCGATAGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPDPILR*VPIELA
Trigger: AGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALADHVRT*LLSAQT
Trigger: AGTCTGTGCCGACAACAACCACGTGCGGACATGGTC...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNDHVRT*LLSAQT
Trigger: AGTCTGTGCCGACAACAACCACGTGCGGACATGGTC...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFGVEPG*VEIMPR
Trigger: CCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKGVEPG*VEIMPR
Trigger: CCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCC...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYGVEPG*VEIMPR
Trigger: CCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCC...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTAGGAAGCGAGTGGGGTaGAGCCGGGCTGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPRKRVG*SRAGWK
Trigger: TTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCT...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCTGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACTCTGGCGAGAGGTACTaGATCTCTTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNSGERY*ISCLPH
Trigger: ATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGA...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACGTCCTCCTAGCTGCTaGGGCCCCACTAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLRPPSC*GPTRLC
Trigger: GCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCATGCACCCGGGCTGTaGGCGCCAGTCGTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKHAPGL*APVVRW
Trigger: CCATCGAACGACTGGCGCTCACAGCCCGGGTGCATG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCAAGGTCTGGAAGAGCTaGGGCCCCGAGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGKVWKS*GPEPTV
Trigger: GACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTGCGGTGCACAGTaGAGGTCTGGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPGCGAQ*RSGRAE
Trigger: CTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCACCTGCTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPGHLLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGCAGGTGGCC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594298.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCGTCAGGCCACCTGCTaGGATGAGGTGCTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPRQATC*DEVLLR
Trigger: TCGGAGAAGCACCTCATCTCAGCAGGTGGCCTGACG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594298.5
CDS-3UTR GCA 90 bp CCATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAACTCCTCTCGAAGCTaGAGGCGACGAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLKRTFPQEDRSNSSRSCNSSRS*RRRTRG
Trigger: TCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTT...GCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGGCCCCACTAGGCTGTaGCGGTTCCGCCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLGPTRL*RFRRFT
Trigger: AGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGACAGTCTCCGGGTGCTaGACGATGACCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKTVSGC*TMTRTP
Trigger: GGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAACAGTCTCCGGGTGCTaGACGATGACCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLTVSGC*TMTRTP
Trigger: GGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGT...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACCCACAGTCTCCGGGTaGTGCACGATGACCCGCACG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLPTVSG*CTMTRT
Trigger: CGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCCCACAGTCTCCGGGTaGTGCACGATGACCCGCACG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYPTVSG*CTMTRT
Trigger: CGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCCACAGTCTCCGGGTaGTGCACGATGACCCGCACG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFPTVSG*CTMTRT
Trigger: CGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGAAMPI*RLQSQD
Trigger: ATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GAACACTGGTGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACAAGAAGATCGCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: EHWWRQVTIEEDVSTRRSHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...CGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: IEEDVSTRRSIQLLSKLQLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...CTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCAGTCCAGGCGGGGGCTaGAAAACACCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGSPGGG*KTPAAS
Trigger: GCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSRRTKS*LALGTT
Trigger: GGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCT...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGRRTKS*LALGTT
Trigger: GGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGGCCGAGGCCGTCCATaGCGGTGGTTAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKGRGRP*RWLGPT
Trigger: TGTGGGACCTAACCACCGCCATGGACGGCCTCGGCC...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPLGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATGGCCGTCGGAGGTCTaGCCCACTCCGCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLWPSEV*PTPHQF
Trigger: GAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCA...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CCATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: PLKRTFPQEDRSNSSRSCAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...GCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGAAGGTCTGGAAGAGCTaGGGCCCCGAGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKKVWKS*GPEPTV
Trigger: GACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTTGGGAGGCTGCGGTGCACAGTaGAGGTCTGGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HHGSCVVQKEVSLSFILGGCGAQ*RSGRAE
Trigger: CTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCC...TCCCAAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR TCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSPLPSR*ETHEEL
Trigger: CAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCGCACTCCAGCACTGTaGAGGCTGTCGTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKRTPAL*RLSWVS
Trigger: GCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATGGTGTTGCTGGAGGCTaGGTGGAGGCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYGVAGG*VEAGEG
Trigger: TCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACC...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGTCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCATCTTGGGAGGTGTaGGGGGAGTGCCGAGACCGC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLSSWEV*GECRDR
Trigger: GCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGA...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: IEEDVSTRRSIQLLSKLQLSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...CTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCTCGCTGCCGGTGGCTaGTGCCACCATCTTGTCATG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGLAAGG*CHHLVM
Trigger: CATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAG...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKAAMPI*RLQSQD
Trigger: ATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGC...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFALQPP*PSADSR
Trigger: TCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYALQPP*PSADSR
Trigger: TCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGC...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCACGGAGCACACCCGCTaGCCAGTAGATGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGTEHTR*PVDERR
Trigger: GCGTCTCTCATCTACTGGGCAGCGGGTGTGCTCCGT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCAGTCCAGGCGGGGGCTaGAAAACACCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFSPGGG*KTPAAS
Trigger: GCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACT...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCATGGGCTGCACCTCCTaGACCTGCCAGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSMGCTS*TCQCLV
Trigger: CACCAAGCACTGGCAGGTCCAGGAGGTGCAGCCCAT...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCATGGGCTGCACCTCCTaGACCTGCCAGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGMGCTS*TCQCLV
Trigger: CACCAAGCACTGGCAGGTCCAGGAGGTGCAGCCCAT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCATCCACGTAGTAAATaGAGCCGTTGTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGHPRSK*SRCCSP
Trigger: TGGGCTGCAACAACGGCTCCATTTACTACGTGGATG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGACCCCATCCTCCGCTaGGTCCCGATAGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFDPILR*VPIELA
Trigger: AGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGACCCCATCCTCCGCTaGGTCCCGATAGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLDPILR*VPIELA
Trigger: AGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCAGGAAGCGAGTGGGGTaGAGCCGGGCTGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFRKRVG*SRAGWK
Trigger: TTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCT...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKRRTKS*LALGTT
Trigger: GGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGGCCGTCCATGGCGGTaGTTAGGTCCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFGRPWR*LGPTWP
Trigger: TGGCCATGTGGGACCTAACCACCGCCATGGACGGCC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATGGCCGTCCATGGCGGTaGTTAGGTCCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYGRPWR*LGPTWP
Trigger: TGGCCATGTGGGACCTAACCACCGCCATGGACGGCC...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCCACATTCAGATGAATaGCTTCCCCGGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKPHSDE*LPREAP
Trigger: GGGGGCCTCCCGGGGAAGTCATTCATCTGAATGTGG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCCACATTCAGATGAATaGCTTCCCCGGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYPHSDE*LPREAP
Trigger: GGGGGCCTCCCGGGGAAGTCATTCATCTGAATGTGG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGACGAACCAGAGGAGTaGGCCCATAGAACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPDEPEE*AHRTGL
Trigger: AAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCCGCGTCATAACTGGTaGTGGGCTGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYPRHNW*WAAPPG
Trigger: TCCAGGAGGTGCAGCCCATCACCAGTTATGACGCGG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCCCGATAGAGCTCGCTaGCAAGGAGGTCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPPDRAR*QGGRCL
Trigger: AAGACAACGACCTCCTTGTCAGCGAGCTCTATCGGG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGGCTGCGGTGCACAGTaGAGGTCTGGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFGCGAQ*RSGRAE
Trigger: CTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCGGCACAGACTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSRHRLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKPLPSR*ETHEEL
Trigger: CAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000594862.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTTTATTGGGGAGGGTaGCTTTGGCTTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALYWGG*LWLPEK
Trigger: CTTTTCTGGAAGCCAAAGTCACCCTCCCCAATAAAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCTTTATTGGGGAGGGTaGCTTTGGCTTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNLYWGG*LWLPEK
Trigger: CTTTTCTGGAAGCCAAAGTCACCCTCCCCAATAAAG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR TCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTTTATTGGGGAGGGTaGCTTTGGCTTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGLYWGG*LWLPEK
Trigger: CTTTTCTGGAAGCCAAAGTCACCCTCCCCAATAAAG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCTTTCAGCGTCGAGATaGGTCCGCTCAGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPLSASR*VRSEDW
Trigger: CCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGCTGCCGGTGGCTGCTaGCACCATCTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGAAGGC*HHLVMF
Trigger: GAACATGACAAGATGGTGGCAGCAGCCACCGGCAGC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTCGCTGCCGGTGGCTaGTGCCACCATCTTGTCATG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFLAAGG*CHHLVM
Trigger: CATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGTGCACCTCCTGGACCTaGCAGTGCTTGGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKCTSWT*QCLVTA
Trigger: TGCCGTCACCAAGCACTGGCAGGTCCAGGAGGTGCA...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGAGGAGGAAGGAGCCTaGCGCGTCATAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPEEEGA*RVITGD
Trigger: ATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCTC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGTGACAGGGCTGCGGTaGACAGTGAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSVTGLR*TVKVWK
Trigger: CTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCAC...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGCTGGGTGGAAATCATaGCGCGGAAGCGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSAGWKS*RGSESQ
Trigger: CTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGC...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATACGGAGCACACCCGCTaGCCAGTAGATGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYTEHTR*PVDERR
Trigger: GCGTCTCTCATCTACTGGGCAGCGGGTGTGCTCCGT...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTTCATGGAGGAGGCTaGAACCGTGGACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFLHGGG*NRGHPW
Trigger: CCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCTGCATTGCCAAGGTTaGGGGGCATCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSLHCQG*GASCCS
Trigger: GGAGCAACACGATGCCCCCCAACCTTGGCAATGCAG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACCTGTAGCAGACTAGAAACTGGGTATAGGCCACAGCGATCCAATTATGGTGTCACAGCGATCCAATTATaGTGTCCACACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TCSRLETGYRPQRSNYGVTAIQL*CPHTRR
Trigger: GCGCCTGGTGTGTGGACACCATAATTGGATCGCTGT...GACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTCTAGTCTGCTACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCTTGTAGCAATGAGCTaGTTCCCGACGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGLVAMS*FPTKNK
Trigger: CTTGTTCTTCGTCGGGAACCAGCTCATTGCTACAAG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600718.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTTGTAGCAATGAGCTaGTTCCCGACGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALALVAMS*FPTKNK
Trigger: CTTGTTCTTCGTCGGGAACCAGCTCATTGCTACAAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291842.10
ENST00000600718.5
CDS-3UTR CCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGATGGGCTGCACCTCCTaGACCTGCCAGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKMGCTS*TCQCLV
Trigger: CACCAAGCACTGGCAGGTCCAGGAGGTGCAGCCCAT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: PRHHGSCVVQKEVSLSFIDHVRT*LLSAQT
Trigger: AGTCTGTGCCGACAACAACCACGTGCGGACATGGTC...GATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLLKGSE*GGAGLG
Trigger: ACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTGGTTAGGTCCCACATaGCCAAGCTGCCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSWLGPT*PSCRWP
Trigger: AGGCCAACGGCAGCTTGGCCATGTGGGACCTAACCA...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCTTGGGCTCCCACGGTaGCCAGACAAGGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYLGLPR*PDKEVL
Trigger: CAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALAHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: RTRASQGIMAAALFKRKFHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...AAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CCA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GGDLVTITIYSKEALALNHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCCTCCCACATTCAGATaGATGACTTCCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKPPTFR*MTSPGG
Trigger: GCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTTCTGGCGAGAGGTACTaGATCTCTTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPSGERY*ISCLPH
Trigger: ATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGA...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACGGCACAGACTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLRHRLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGGCACAGACTGAGATaGGGTGCTTCTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFRHRLR*GASPTA
Trigger: TGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGCTGCCGGTGGCTGCTaGCACCATCTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLAAGGC*HHLVMF
Trigger: GAACATGACAAGATGGTGGCAGCAGCCACCGGCAGC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAATGGAGCCGTTGTTaGAGCCCAGGAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSKWSRC*SPGGGR
Trigger: CCTTCCTCCTCCTGGGCTGCAACAACGGCTCCATTT...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGTGACAGGGCTGCGGTaGACAGTGAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLVTGLR*TVKVWK
Trigger: CTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCAC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGCTGGGTGGAAATCATaGCGCGGAAGCGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFAGWKS*RGSESQ
Trigger: CTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKCHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTGTCATTGCCAGCACTaGAGCCGCCATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYCHCQH*SRHAHL
Trigger: CAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACA...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATAGGGGCCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYRGQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCT...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAAGGGGCCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLRGQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCT...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTTGTTCTGGATGAACACTTaGTGGTCGTCCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: RHHGSCVVQKEVSLSFILFWMNT*WSSRSP
Trigger: CGGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAA...CAAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCAGACAAGGAGGTGTTaGTGGAGGCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKQTRRC*WRLSGG
Trigger: GCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: REGGDLVTITIYSKEALARHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCACCTGCAATGTCATTaGCAGCACTGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGHLQCH*QHCSRH
Trigger: ATGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTG...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSDHVRT*LLSAQT
Trigger: AGTCTGTGCCGACAACAACCACGTGCGGACATGGTC...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATGGTTAGGTCCCACATaGCCAAGCTGCCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLWLGPT*PSCRWP
Trigger: AGGCCAACGGCAGCTTGGCCATGTGGGACCTAACCA...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTGGTTAGGTCCCACATaGCCAAGCTGCCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYWLGPT*PSCRWP
Trigger: AGGCCAACGGCAGCTTGGCCATGTGGGACCTAACCA...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACTCCGCACCAGTTCCTaGCAGCGTTCCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLLRTSS*QRSTKL
Trigger: CAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGACGAACCAGAGGAGTaGGCCCATAGAACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFDEPEE*AHRTGL
Trigger: AAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCCCGATAGAGCTCGCTaGCAAGGAGGTCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKPDRAR*QGGRCL
Trigger: AAGACAACGACCTCCTTGTCAGCGAGCTCTATCGGG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATAACTCCTCTCGAAGCTaGAGGCGACGAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYNSSRS*RRRTRG
Trigger: TCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTT...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGAACTCCTCTCGAAGCTaGAGGCGACGAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKNSSRS*RRRTRG
Trigger: TCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCGAGGAGGAAGGAGCCTaGCGCGTCATAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFEEEGA*RVITGD
Trigger: ATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCTC...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCTGGATGAACACTTaGTGGTCGTCCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLFWMNT*WSSRSP
Trigger: CGGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAA...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTCCGTCAGGCCACCTaGAATGTCATTGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFLRQAT*NVIAST
Trigger: AGTGCTGGCAATGACATTGCAGGTGGCCTGACGGAG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCTCCGTCAGGCCACCTaGAATGTCATTGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYLRQAT*NVIAST
Trigger: AGTGCTGGCAATGACATTGCAGGTGGCCTGACGGAG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS-3UTR CCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGAACCGTGGACACCCCTaGGATCCAACTCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKNRGHP*DPTLWC
Trigger: GCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCTTCACTGGGAACACTaGTGGCGGCAGGTAACCATT +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGLHWEH*WRQVTI
Trigger: AATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCACAGCGATCCAATTATaGTGTCCACACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGTAIQL*CPHTRR
Trigger: GCGCCTGGTGTGTGGACACCATAATTGGATCGCTGT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCATCCACGTAGTAAATaGAGCCGTTGTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPHPRSK*SRCCSP
Trigger: TGGGCTGCAACAACGGCTCCATTTACTACGTGGATG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp ATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTGCAGGTGAACAGAGAATGCTaGGATCCAACTCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: IEEDVSTRRSIQLLSKLQVNREC*DPTLWC
Trigger: GCACCAAAGAGTTGGATCCCAGCATTCTCTGTTCAC...CTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS-3UTR CCA 90 bp CAGGTAACCATTGAAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGA +
Preference number: 4 (lower is better)
Translates to: QVTIEEDVSTRRSIQLLSNRGHP*VVELTR
Trigger: TCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTT...CGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595523.5
ENST00000599575.5
CDS-3UTR TCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGCGGCAGGTAACCATTaGAGAGGACGTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLAAGNH*RGRFHK
Trigger: CTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCTGCTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFPAEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGCAGG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594298.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCACTGGGAACACTGGTaGCGGCAGGTAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFHWEHW*RQVTIE
Trigger: TTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCATCCACGTAGTAAATaGAGCCGTTGTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WLPEKREGGDLVTITIYSHPRSK*SRCCSP
Trigger: TGGGCTGCAACAACGGCTCCATTTACTACGTGGATG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCAGACTGAGATGAGGTaGTTCTCCGACAGCATGATC +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKQTEMR*FSDSMI
Trigger: GATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR TCA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCTTTATTGGGGAGGGTaGCTTTGGCTTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFLYWGG*LWLPEK
Trigger: CTTTTCTGGAAGCCAAAGTCACCCTCCCCAATAAAG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CCA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCATCCCAAGGCATCATaGCAGCTGCGTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LWLPEKREGGDLVTITIYHPKAS*QLRCSK
Trigger: TTTTGAACAACGCAGCTGCCATGATGCCTTGGGATG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LPEKREGGDLVTITIYSKRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR GCA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAAGGCATCATGGCAGCTaGGTTGTTCAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLRHHGS*VVQKEV
Trigger: AACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS TCA 90 bp GGGGCCGAGAGCCGAGCCGCCGGGAGCCCTCGCACTCCAGCACTGTaGAGGCTGTCGTGGGTGAGCCGTCCACGGAGCGCACGGAGCACA +
Preference number: 5 (lower is better)
Translates to: GAESRAAGSPRTPAL*RLSWVSRPRSARST
Trigger: TGTGCTCCGTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCGAGGGCTCCCGGCGGCTCGGCTCTCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
ENST00000602239.1
CDS CCA 90 bp GCTCTTGCTCCGTCAGGCCACCAGGGGCCTGGCCGAGGCCGTCCATaGCGGTGGTTAGGTCCCACATGGCCAAGCTGCCGTTGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ALAPSGHQGPGRGRP*RWLGPTWPSCRWPG
Trigger: GCCAGGCCAACGGCAGCTTGGCCATGTGGGACCTAACCACCGCCATGGACGGCCTCGGCCAGGCCCCTGGTGGCCTGACGGAGCAAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597396.5
CDS GCA 90 bp TTCCACACCCCGATGCGCCCTATCTCGGAGCCACCGCCTTCCGCCTaGAGAGCCCATAGCAGGATCTCGCTGCCGGTGGCTGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: FHTPMRPISEPPPSA*RAHSRISLPVAAAT
Trigger: GGTGGCAGCAGCCACCGGCAGCGAGATCCTGCTATGGGCTCTGCAGGCGGAAGGCGGTGGCTCCGAGATAGGGCGCATCGGGGTGTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600733.5
CDS-3UTR CAA 90 bp TGTGAGGGGAGTGCCGAGACCGCTGGAGGGCCACGGGGCTGGTGTGGGTGGCCGGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATG +
Preference number: 5 (lower is better)
Translates to: CEGSAETAGGPRGWCGWPVRTWL*SAQTEM
Trigger: CATCTCAGTCTGTGCCGACAACAACCACGTGCGGAC...CGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS CCA 90 bp GACTGCAGGGAAGGGACACCGAGCAGGCGTCACGGGCCGGGGGAGTaGATATTAGGTCTCCCACGCCCTCTCCATCCCTCCTACCCTCGC +
Preference number: 5 (lower is better)
Translates to: DCREGTPSRRHGPGE*ILGLPRPLHPSYPR
Trigger: GCGAGGGTAGGAGGGATGGAGAGGGCGTGGGAGACCTAATATCCACTCCCCCGGCCCGTGACGCCTGCTCGGTGTCCCTTCCCTGCAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594973.5
ENST00000598558.5
CDS-3UTR CAA 90 bp GCCACGGGGCTGGTGTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCATGTCCGCACGTGGTaGTTGTCGGCACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: ATGLVWVAVGGLAHSAPVHVRTW*LSAQTE
Trigger: CTCAGTCTGTGCCGACAACAACCACGTGCGGACATG...AACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS TCA 90 bp ATCTTGGTGACAGGGCTGCGGTGCACAGTGAAGGTCTGGAAGAGCTaGGGCCCCGAGCCCACAGTCTCCGGGTGCTGCACGATGACCCGC +
Preference number: 5 (lower is better)
Translates to: ILVTGLRCTVKVWKS*GPEPTVSGCCTMTR
Trigger: GCGGGTCATCGTGCAGCACCCGGAGACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCACCAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594973.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
CDS-3UTR CAA 90 bp GAGGCCCCACTAGGCTGTGCCGGTTCCGCCGCTTCACTGGGAACACTGGTGGCGTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACT +
Preference number: 5 (lower is better)
Translates to: EAPLGCAGSAASLGTLVALVRRK*RMGAKT
Trigger: AGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAA...CGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CAA 90 bp GTCGGACAGGGGCTGGCCGTCCTCCTAGCTGCTGAGGCCCCACTAGGCTGTGCCCTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VGQGLAVLLAAEAPLGCALGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...GGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CAA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATG +
Preference number: 5 (lower is better)
Translates to: GPEPGVPTGIREAPESPRVRTWL*SAQTEM
Trigger: CATCTCAGTCTGTGCCGACAACAACCACGTGCGGAC...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCCTTCTGGATGAACACTaGCTGGTCGTCCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: PGPEPGVPTGIREAPESPLLDEH*LVVPLT
Trigger: GGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAAG...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS TCA 90 bp CCATCTTGTCATGTTCACCCAAAGCCCCACCATGCACCCGGGCTGTaGGCGCCAGTCGTTCGATGGGCCAGTCCAGGCGGGGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PSCHVHPKPHHAPGL*APVVRWASPGGGWK
Trigger: TTTCCAGCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATGACAAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000598907.5
ENST00000600718.5
ENST00000600733.5
CDS GCA 90 bp GTGGCTGCTGCCACCATCTTGTCATGTTCACCCAAAGCCCCACCATaGACCCGGGCTGTGAGCGCCAGTCGTTCGATGGGCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VAAATILSCSPKAPP*TRAVSASRSMGQSR
Trigger: CCTGGACTGGCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000598907.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGGGAGTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACT +
Preference number: 5 (lower is better)
Translates to: HTPGAPSPAPQVVLRVRELVRRK*RMGAKT
Trigger: AGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAA...CTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CAA 90 bp GGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGGCTGACAAGGAGGTCGTaGTCTTTCATGCGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: GPEPGVPTGIREAPESPRLTRRS*SFMRKG
Trigger: CCCCTTGCGCATGAAAGACAACGACCTCCTTGTCAG...CCTGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS CCA 90 bp CACCGCCTTCCGCCTGCAGAGCCCATAGCAGGATCTCGCTGCCGGTaGCTGCTGCCACCATCTTGTCATGTTCACCCAAAGCCCCACCAT +
Preference number: 5 (lower is better)
Translates to: HRLPPAEPIAGSRCR*LLPPSCHVHPKPHH
Trigger: ATGGTGGGGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAGATCCTGCTATGGGCTCTGCAGGCGGAAGGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
CDS CCA 90 bp CCGTCAGGCCACCGCTGCCCAGTAGATGAGAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACCTTCTGGATGAACACTTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PSGHRCPVDERRTKS*LALGTTFWMNTCWS
Trigger: CGACCAGCAAGTGTTCATCCAGAAGGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGGTGGCCTGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594862.1
ENST00000596163.5
CDS-3UTR CAA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCACTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LALNPGFPQESGRHLSPPLGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCSDSMI*VTGLRC
Trigger: GCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGA...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000596163.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATG +
Preference number: 5 (lower is better)
Translates to: APESPRTRASQGIMAAALVRTWL*SAQTEM
Trigger: CATCTCAGTCTGTGCCGACAACAACCACGTGCGGAC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCATGTCCGCACGTGGTaGTTGTCGGCACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: APESPRTRASQGIMAAALHVRTW*LSAQTE
Trigger: CTCAGTCTGTGCCGACAACAACCACGTGCGGACATG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCGCAGTGAGGACTTTATaGGGGAGGGTGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PGPEPGVPTGIREAPESPAVRTL*GRVTLA
Trigger: AGCCAAAGTCACCCTCCCCAATAAAGTCCTCACTGC...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000600733.5
CDS-3UTR CAA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTAGGCCACCAATGTCATaGCCAGCACTGCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCRPPMS*PALQPP
Trigger: TGGCGGCTGCAGTGCTGGCAATGACATTGGTGGCCT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593764.5
CDS CCA 90 bp TCCAGAGCCAGGATCTTAAAGGAAGCGAGTGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGGAAGCGAGTCACAGACCATGTCCGC +
Preference number: 5 (lower is better)
Translates to: SRARILKEASGVEPG*VEIMPRKRVTDHVR
Trigger: GCGGACATGGTCTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CCA 90 bp ATGCCCATCTGCCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGTGGAAATCATGCCGCGGAAGCGAGT +
Preference number: 5 (lower is better)
Translates to: MPICRLQSQDLKGSE*GGAGLGGNHAAEAS
Trigger: ACTCGCTTCCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CCA 90 bp ACGGAGCACACCCGCTGCCCAGTAGATGAGAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACCTTCTGGATGAACACTTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: TEHTRCPVDERRTKS*LALGTTFWMNTCWS
Trigger: CGACCAGCAAGTGTTCATCCAGAAGGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGGGTGTGCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
CDS CCA 90 bp TCAGGCCACCTGCGCTGCCCAGTAGATGAGAGACGCACGAAGAGCTaGCTGGCACTGGGCACCACCTTCTGGATGAACACTTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SGHLRCPVDERRTKS*LALGTTFWMNTCWS
Trigger: CGACCAGCAAGTGTTCATCCAGAAGGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGCAGGTGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595726.1
CDS-3UTR CAA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGCTGCTGCCACCATCTaGTCATGTTCACCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: APESPRTRASQGIMAAALAAATI*SCSPKA
Trigger: GGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTTCTGGATGAACACTaGCTGGTCGTCCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLLDEH*LVVPLT
Trigger: GGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAGCAGTGAGGACTTTATaGGGGAGGGTGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LALNPGFPQESGRHLSPPAVRTL*GRVTLA
Trigger: AGCCAAAGTCACCCTCCCCAATAAAGTCCTCACTGC...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000600733.5
CDS GCA 90 bp GTAGTAAATGGAGCCGTTGTTGCAGCCCAGGAGGAGGAAGGAGCCTaGCGCGTCATAACTGGTGATGGGCTGCACCTCCTGGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: VVNGAVVAAQEEEGA*RVITGDGLHLLDLP
Trigger: TGGCAGGTCCAGGAGGTGCAGCCCATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCTCCTGGGCTGCAACAACGGCTCCATTTACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
CDS GCA 90 bp GTAGGGGCCAATGTCATTGCCAGCACTGCAGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VGANVIASTAAAMPI*RLQSQDLKGSEWGG
Trigger: TCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
CDS GCA 90 bp CAGGCCACCAATGTCATTGCCAGCACTGCAGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: QATNVIASTAAAMPI*RLQSQDLKGSEWGG
Trigger: TCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593764.5
CDS GCA 90 bp GCCACCTGCAATGTCATTGCCAGCACTGCAGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: ATCNVIASTAAAMPI*RLQSQDLKGSEWGG
Trigger: TCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS CCA 90 bp CTTGGGGGTGAGGTAGACACTGAGGGCGGTGACCCCATCCTCCGCTaGGTCCCGATAGAGCTCGCTGACAAGGAGGTCGTTGTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: LGGEVDTEGGDPILR*VPIELADKEVVVFH
Trigger: ATGAAAGACAACGACCTCCTTGTCAGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTCACCGCCCTCAGTGTCTACCTCACCCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CCA 90 bp CTCGCCCCAAACTCGCTCTCCCGATCACCTGGAGAAGAAGGAGTCTaGGATCCAGGTGAGAGTCTGGCGAGAGGTACTGAATCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LAPNSLSRSPGEEGV*DPGESLARGTESGR
Trigger: CCGCCCAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCCTTCTTCTCCAGGTGATCGGGAGAGCGAGTTTGGGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598558.5
CDS-3UTR CAA 90 bp GGTGAGGGAGGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCATTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACT +
Preference number: 5 (lower is better)
Translates to: GEGGVFSSSIRPSSPALPLVRRK*RMGAKT
Trigger: AGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAA...TGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CAA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTCTGACAAGGAGGTCGTaGTCTTTCATGCGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCLTRRS*SFMRKG
Trigger: CCCCTTGCGCATGAAAGACAACGACCTCCTTGTCAG...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGGCAGTGAGGACTTTATaGGGGAGGGTGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: APESPRTRASQGIMAAALAVRTL*GRVTLA
Trigger: AGCCAAAGTCACCCTCCCCAATAAAGTCCTCACTGC...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000600733.5
CDS-3UTR CAA 90 bp TGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCTGAGGGTGAGCCCTGGGTAGTAGAATaGACTAGAGGTCAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CPHTRRTIPGSSGCPEGEPWVVE*TRGQGL
Trigger: CAGACCCTGACCTCTAGTCAATTCTACTACCCAGGG...CTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599575.5
CDS GCA 90 bp TGCTCCGTCAGGCCACCAATGTCATTGCCAGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGT +
Preference number: 5 (lower is better)
Translates to: CSVRPPMSLPALQPP*PSADSRARILKEAS
Trigger: ACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGTGGCCTGACGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593764.5
CDS GCA 90 bp TCCGTCAGGCCACCTGCAATGTCATTGCCAGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGT +
Preference number: 5 (lower is better)
Translates to: SVRPPAMSLPALQPP*PSADSRARILKEAS
Trigger: ACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTGGCCTGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS GCA 90 bp GTAGGCACCAATGTCATTGCCAGCACTGCAGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VGTNVIASTAAAMPI*RLQSQDLKGSEWGG
Trigger: TCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGTGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600791.5
CDS-3UTR CAA 90 bp CTGCAGGCGACGAACCAGAGGAGTGAGCCCATAGAACTGGGCTTCATGGAGGAGTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACT +
Preference number: 5 (lower is better)
Translates to: LQATNQRSEPIELGFMEELVRRK*RMGAKT
Trigger: AGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAA...CTCCTCCATGAAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTCGCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CAA 90 bp CCAATTATGGTGTCCACACACCAGGCGCACCATCCCCGGCTCCTCAGGTTGTCCCTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PIMVSTHQAHHPRLLRLSLGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...GGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
CDS-3UTR CAA 90 bp GTGGGTGGCCGTCGGAGGTCTGGCCCACTCCGCACCAGTTCCTGGCAGCGTTCCATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: VGGRRRSGPLRTSSWQRSIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...GGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS CCA 90 bp CCCGATCACCTGGAGAAGAAGGAGTCTGGGATCCAGGTGAGAGTCTaGCGAGAGGTACTGAATCTGGGCGGGGAAGGTAAACGGACGCAA +
Preference number: 5 (lower is better)
Translates to: PDHLEKKESGIQVRV*REVLNLGGEGKRTQ
Trigger: TTGCGTCCGTTTACCTTCCCCGCCCAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCCTTCTTCTCCAGGTGATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598558.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: PGPEPGVPTGIREAPESPIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...GGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS CCA 90 bp CATAGAACTGGGCTTCATGGAGGAGGCTGGAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGAGGTCAGGGTCTAGGTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: HRTGLHGGGWNRGHP*VVELTRGQGLGVGV
Trigger: CACCCCCACACCTAGACCCTGACCTCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAGCCCAGTTCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS-3UTR CAA 90 bp CTGGCCCTGAACCCGGGGTTCCCACAGGAATCAGGGAGGCACCTGAGTCCCCCAATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LALNPGFPQESGRHLSPPIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...TGGGGGACTCAGGTGCCTCCCTGATTCCTGTGGGAACCCCGGGTTCAGGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GGGGTTTTCTCATCCAGCATTCGGCCCAGCAGCCCTGCATTGCCAAGGTTGGGGCCCTGGGTAGTAGAATaGACTAGAGGTCAGGGTCTA +
Preference number: 5 (lower is better)
Translates to: GVFSSSIRPSSPALPRLGPWVVE*TRGQGL
Trigger: TAGACCCTGACCTCTAGTCAATTCTACTACCCAGGG...CCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS-3UTR CAA 90 bp GAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: EGRWGPSNNNHLFQGGPGSDSMI*VTGLRC
Trigger: GCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGA...GCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: APESPRTRASQGIMAAALQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GCACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: APESPRTRASQGIMAAALIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...CAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACCCACCTGCAATGTCATaGCCAGCACTGCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GGDLVTITIYSKEALALNPPAMS*PALQPP
Trigger: TGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTGG...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS GCA 90 bp TCCTCAGGGACTGAAGACAGTGAGGGACTCCCTCCCCTTTTTCCATaGCAACCTGGGATCCAACTCTTTGGTGCGCAGGAAGTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: SSGTEDSEGLPPLFP*QPGIQLFGAQEVED
Trigger: ATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGTTGGCATGGAAAAAGGGGAGGGAGTCCCTCACTGTCTTCAGTCCCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599716.5
CDS CCA 90 bp CATAGAACTGGGCTTCATGGAGGAGGCTGGAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGAGGTCAGGGTCTGGGATCCAACTCT +
Preference number: 5 (lower is better)
Translates to: HRTGLHGGGWNRGHP*VVELTRGQGLGSNS
Trigger: AGAGTTGGATCCCAGACCCTGACCTCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAGCCCAGTTCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599575.5
ENST00000600552.5
CDS-3UTR CAA 90 bp CTTCACTGGGAACACTGGTGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACACTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LHWEHWWRQVTIEEDVSTLGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...TGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CAA 90 bp CACTGGGAACACTGGTGGCGGCAGGTAACCATTGAAGAGGACGTTTCCACAAGACTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HWEHWWRQVTIEEDVSTRLGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...TCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595523.5
ENST00000595803.5
ENST00000599575.5
CDS-3UTR CAA 90 bp GGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGAACGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATG +
Preference number: 5 (lower is better)
Translates to: GGDLVTITIYSKEALALNVRTWL*SAQTEM
Trigger: CATCTCAGTCTGTGCCGACAACAACCACGTGCGGAC...GTTCAGGGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCATGTCCGCACGTGGTaGTTGTCGGCACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: REGGDLVTITIYSKEALAHVRTW*LSAQTE
Trigger: CTCAGTCTGTGCCGACAACAACCACGTGCGGACATG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CACCTGAGTCCCCCAGGACCAGGGCATCCCAAGGCATCATGGCAGCTGCGTTGTATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: HLSPPGPGHPKASWQLRCIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...ACAACGCAGCTGCCATGATGCCTTGGGATGCCCTGGTCCTGGGGGACTCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000596163.5
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: REGGDLVTITIYSKEALALGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCCACCTGCAATGTCATaGCCAGCACTGCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPPPAMS*PALQPP
Trigger: TGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTGG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS GCA 90 bp AAGAGGACGTTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTaGAGGCGACGAACTGCAACAGGAGGACTTAAAGGCTGGGACTTA +
Preference number: 5 (lower is better)
Translates to: KRTFPQEDRSNSSRS*RRRTATGGLKGWDL
Trigger: TAAGTCCCAGCCTTTAAGTCCTCCTGTTGCAGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598907.5
CDS-3UTR CAA 90 bp AGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTTGTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: RHHGSCVVQKEVSLSFILSDSMI*VTGLRC
Trigger: GCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGA...CAAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CAA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATG +
Preference number: 5 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPVRTWL*SAQTEM
Trigger: CATCTCAGTCTGTGCCGACAACAACCACGTGCGGAC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CCAAGGCATCATGGCAGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCCTTCTGGATGAACACTaGCTGGTCGTCCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: PRHHGSCVVQKEVSLSFILLDEH*LVVPLT
Trigger: GGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAAG...GATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCTGCCATGATGCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYSDSMI*VTGLRC
Trigger: GCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGA...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFSDSMI*VTGLRC
Trigger: GCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGA...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp TGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCCATGTCCGCACGTGGTaGTTGTCGGCACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: WLPEKREGGDLVTITIYSHVRTW*LSAQTE
Trigger: CTCAGTCTGTGCCGACAACAACCACGTGCGGACATG...GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACT +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYLVRRK*RMGAKT
Trigger: AGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAA...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGCTGCTGCCACCATCTaGTCATGTTCACCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGAAATI*SCSPKA
Trigger: GGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTAGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATG +
Preference number: 5 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLVRTWL*SAQTEM
Trigger: CATCTCAGTCTGTGCCGACAACAACCACGTGCGGAC...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCATGTCCGCACGTGGTaGTTGTCGGCACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYHVRTW*LSAQTE
Trigger: CTCAGTCTGTGCCGACAACAACCACGTGCGGACATG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCTTCTGGATGAACACTaGCTGGTCGTCCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: LPEKREGGDLVTITIYSKLLDEH*LVVPLT
Trigger: GGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAAG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCTTCTGGATGAACACTaGCTGGTCGTCCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYLLDEH*LVVPLT
Trigger: GGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAAG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291842.10
ENST00000595726.1
ENST00000597396.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGCAGTGAGGACTTTATaGGGGAGGGTGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPAVRTL*GRVTLA
Trigger: AGCCAAAGTCACCCTCCCCAATAAAGTCCTCACTGC...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000600733.5
CDS-3UTR CAA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLLGSNS*VRRKLR
Trigger: CCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGCTGCTGCCACCATCTaGTCATGTTCACCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LPEKREGGDLVTITIYSKAAATI*SCSPKA
Trigger: GGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGC...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCTGACAAGGAGGTCGTaGTCTTTCATGCGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYLTRRS*SFMRKG
Trigger: CCCCTTGCGCATGAAAGACAACGACCTCCTTGTCAG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291842.10
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: REGGDLVTITIYSKEALAQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTGGCCATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: REGGDLVTITIYSKEALAIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...GGCCAGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCGCAGTGAGGACTTTATaGGGGAGGGTGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGAVRTL*GRVTLA
Trigger: AGCCAAAGTCACCCTCCCCAATAAAGTCCTCACTGC...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000600733.5
CDS-3UTR CAA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGCTGCGTTGTTCAAAAGGAAGTTTCATTGAGCTTCATCTTGGGAGGTGTGAGGCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SCVVQKEVSLSFILGGVRQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...CCTCACACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTGAACAACGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596163.5
CDS-3UTR CAA 90 bp AAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCCCTATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: KEGRWGPSNNNHLFQGGPIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...AGGGCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp AGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGGAGGCATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: RKEGRWGPSNNNHLFQGGIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...GCCTCCTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp TTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LASRKEGRWGPSNNNHLFQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...GAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATTCCAAGCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LPEKREGGDLVTITIYSKQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...CTTGGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp ACTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTACAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: TLASRKEGRWGPSNNNHLQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...TAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATCAAAAGGAAGTTTCATaGAGCTTCATCTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYQKEVS*SFILGG
Trigger: ACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTG...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGAAAAGAGGGAAGGTGGGGACCTAGTAACAATAACCATTTATATCATGGCAGCTGCGTaGTTCAAAAGGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LWLPEKREGGDLVTITIYIMAAA*FKRKFH
Trigger: ATGAAACTTCCTTTTGAACAACGCAGCTGCCATGAT...ATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCTTTTCTGGAAGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594298.5
ENST00000594862.1
ENST00000595726.1
ENST00000597396.5
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
CDS TCA 72 bp GAGGCCCCGAGCCCACAGTCTCCGGGTGCTGCACGATaGCCCGCACGCCCCCTGAGCTGGTGCCATAGGCGA +
Preference number: 6 (lower is better)
Translates to: EAPSPQSPGAAR*PARPLSWCHRR
Trigger: TCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGGCTCGGGGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594298.5
ENST00000594973.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
CDS TCA 72 bp AGCCGAGCCGCCGGGAGCCCTCGCACTCCAGCACTGTaGAGGCTGTCGTGGGTGAGCCGTCCACGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: SRAAGSPRTPAL*RLSWVSRPRSA
Trigger: TGCGCTCCGTGGACGGCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCGAGGGCTCCCGGCGGCTCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
ENST00000602239.1
CDS TCA 72 bp GCCCTCGCACTCCAGCACTGTGAAGGCTGTCGTGGGTaGGCCGTCCACGGAGCGCACGGAGCACACCCGCTG +
Preference number: 6 (lower is better)
Translates to: ALALQHCEGCRG*AVHGAHGAHPL
Trigger: CAGCGGGTGTGCTCCGTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
CDS TCA 72 bp GCCCTCGCACTCCAGCACTGTGAAGGCTGTCGTGGGTaGGCCGTCCACGGAGCGCACGGAGCACACCCTGGG +
Preference number: 6 (lower is better)
Translates to: ALALQHCEGCRG*AVHGAHGAHPG
Trigger: CCCAGGGTGTGCTCCGTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602239.1
CDS CCA 72 bp CACCTGCAGGGGCCTGGCCGAGGCCGTCCATGGCGGTaGTTAGGTCCCACATGGCCAAGCTGCCGTTGGCCT +
Preference number: 6 (lower is better)
Translates to: HLQGPGRGRPWR*LGPTWPSCRWP
Trigger: AGGCCAACGGCAGCTTGGCCATGTGGGACCTAACCACCGCCATGGACGGCCTCGGCCAGGCCCCTGCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
ENST00000602239.1
CDS CCA 72 bp TCAGGCCACCTGCAGGGGCCTGGCCGAGGCCGTCCATaGCGGTGGTTAGGTCCCACATGGCCAAGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: SGHLQGPGRGRP*RWLGPTWPSCR
Trigger: ACGGCAGCTTGGCCATGTGGGACCTAACCACCGCCATGGACGGCCTCGGCCAGGCCCCTGCAGGTGGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
ENST00000602239.1
CDS GCA 72 bp CCGATGCGCCCTATCTCGGAGCCACCGCCTTCCGCCTaGAGAGCCCATAGCAGGATCTCGCTGCCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PMRPISEPPPSA*RAHSRISLPVA
Trigger: AGCCACCGGCAGCGAGATCCTGCTATGGGCTCTGCAGGCGGAAGGCGGTGGCTCCGAGATAGGGCGCATCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600733.5
CDS TCA 72 bp CACGGAGCGCACGGAGCACACCCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTGGCTGGCACTGGGCAC +
Preference number: 6 (lower is better)
Translates to: HGAHGAHPLPSR*ETHEELAGTGH
Trigger: GTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGGGTGTGCTCCGTGCGCTCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
CDS CCA 72 bp GAAGGGACACCGAGCAGGCGTCACGGGCCGGGGGAGTaGATATTAGGTCTCCCACGCCCTCTCCATCCCTCC +
Preference number: 6 (lower is better)
Translates to: EGTPSRRHGPGE*ILGLPRPLHPS
Trigger: GGAGGGATGGAGAGGGCGTGGGAGACCTAATATCCACTCCCCCGGCCCGTGACGCCTGCTCGGTGTCCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594973.5
ENST00000598558.5
CDS CAA 72 bp GGCCAGCTCACAGTGTTCCAGCTGTTCCATCAGCTCTaGCTCCGTCAGGCCACCAGGGGCCTGGCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: GQLTVFQLFHQL*LRQATRGLAEA
Trigger: GGCCTCGGCCAGGCCCCTGGTGGCCTGACGGAGCAAGAGCTGATGGAACAGCTGGAACACTGTGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597396.5
CDS GCA 72 bp GCTGGTCGTCCCGCTCACCGTAGGGGCCAATGTCATTaGCAGCACTGCAGCCGCCATGCCCATCTGCCGACT +
Preference number: 6 (lower is better)
Translates to: AGRPAHRRGQCH*QHCSRHAHLPT
Trigger: AGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCTACGGTGAGCGGGACGACCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600733.5
ENST00000602011.5
CDS TCA 72 bp TCTTGCTCCGTCAGGCCACCTGCGCTGCCCAGTAGATaGGAGACGCACGAAGAGCTGGCTGGCACTGGGCAC +
Preference number: 6 (lower is better)
Translates to: SCSVRPPALPSR*ETHEELAGTGH
Trigger: GTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGCAGGTGGCCTGACGGAGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595726.1
CDS GCA 72 bp GGAGCCGTTGTTGCAGCCCAGGAGGAGGAAGGAGCCTaGCGCGTCATAACTGGTGATGGGCTGCACCTCCTG +
Preference number: 6 (lower is better)
Translates to: GAVVAAQEEEGA*RVITGDGLHLL
Trigger: CAGGAGGTGCAGCCCATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCTCCTGGGCTGCAACAACGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
CDS GCA 72 bp AAGCGAGTGGGGTGGAGCCGGGCTGGGTGGAAATCATaGCGCGGAAGCGAGTCACAGACCATGTCCGCACGT +
Preference number: 6 (lower is better)
Translates to: KRVGWSRAGWKS*RGSESQTMSAR
Trigger: ACGTGCGGACATGGTCTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCCACTCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS GCA 72 bp CATCTTTCAGCGTCGAGATGCGTCCGCTCAGAAGACTaGAGGGAAGGGACACCGAGCAGGCGTCACGGGCCG +
Preference number: 6 (lower is better)
Translates to: HLSASRCVRSED*REGTPSRRHGP
Trigger: CGGCCCGTGACGCCTGCTCGGTGTCCCTTCCCTGCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594973.5
ENST00000598558.5
CDS CAA 90 bp AGAGCCCATAGCAGGATCTCGCTGCCGGTGGCTGCTGCCACCATCTaGTCATGTTCACCCAAAGCCCCACCATGCACCCGGGCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: RAHSRISLPVAAATI*SCSPKAPPCTRAVS
Trigger: GCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAGATCCTGCTATGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
CDS GCA 72 bp GCCACCATCTTGTCATGTTCACCCAAAGCCCCACCATaGACCCGGGCTGTGAGCGCCAGTCGTTCGATGGGC +
Preference number: 6 (lower is better)
Translates to: ATILSCSPKAPP*TRAVSASRSMG
Trigger: GCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATGACAAGATGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000598907.5
ENST00000600718.5
ENST00000600733.5
CDS CCA 72 bp GAGGTAGACACTGAGGGCGGTGACCCCATCCTCCGCTaGGTCCCGATAGAGCTCGCTGACAAGGAGGTCGTT +
Preference number: 6 (lower is better)
Translates to: EVDTEGGDPILR*VPIELADKEVV
Trigger: AACGACCTCCTTGTCAGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTCACCGCCCTCAGTGTCTACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CCA 72 bp TGCCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAGTaGGGTGGAGCCGGGCTGGGTGGAAATCATGCCGCG +
Preference number: 6 (lower is better)
Translates to: CRLQSQDLKGSE*GGAGLGGNHAA
Trigger: CGCGGCATGATTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CCA 72 bp CCGCCTGCAGAGCCCATAGCAGGATCTCGCTGCCGGTaGCTGCTGCCACCATCTTGTCATGTTCACCCAAAG +
Preference number: 6 (lower is better)
Translates to: PPAEPIAGSRCR*LLPPSCHVHPK
Trigger: CTTTGGGTGAACATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAGATCCTGCTATGGGCTCTGCAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000598201.5
ENST00000600718.5
ENST00000600733.5
CDS CCA 72 bp ACCCCGATGCGCCCTGTGTGGCTTGTAGCAATGAGCTaGTTCCCGACGAAGAACAAGGCCTCCACAGGCACC +
Preference number: 6 (lower is better)
Translates to: TPMRPVWLVAMS*FPTKNKASTGT
Trigger: GGTGCCTGTGGAGGCCTTGTTCTTCGTCGGGAACCAGCTCATTGCTACAAGCCACACAGGGCGCATCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000595874.1
ENST00000598201.5
ENST00000600718.5
CDS CCA 72 bp ATGCCGCGGAAGCGAGTCACAGACCATGTCCGCACGTaGTTGTTGTCGGCACAGATGGTCTTGGGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: MPRKRVTDHVRT*LLSAQMVLGVR
Trigger: CCTCACCCCCAAGACCATCTGTGCCGACAACAACCACGTGCGGACATGGTCTGTGACTCGCTTCCGCGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602011.5
CDS TCA 72 bp GAAGGTAAACGGACGCAAGAGATGAAGAGGAGCGGGTaGGGAATGCGTCCCCCTCCCGCAGGATCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: EGKRTQEMKRSG*GMRPPPAGSRV
Trigger: AACCCTGGATCCTGCGGGAGGGGGACGCATTCCTCACCCGCTCCTCTTCATCTCTTGCGTCCGTTTACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600552.5
CDS CCA 72 bp AGGATCTTAAAGGAAGCGAGTGGGGTGGAGCCGGGCTaGGTGGAAATCATGCCGCGGAAGCGAGTCACAGAC +
Preference number: 6 (lower is better)
Translates to: RILKEASGVEPG*VEIMPRKRVTD
Trigger: GTCTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CAA 72 bp ACACCCCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: TPLGSNSLVRRK*RMGAKTVGSLS
Trigger: CGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000595945.5
ENST00000597325.1
ENST00000600718.5
ENST00000600733.5
CDS CAA 72 bp CCGCGGAAGCGAGTCACAGACCATGTCCGCACGTGGTaGTTGTCGGCACAGACTGAGATGAGGTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PRKRVTDHVRTW*LSAQTEMRCFS
Trigger: GGAGAAGCACCTCATCTCAGTCTGTGCCGACAACAACCACGTGCGGACATGGTCTGTGACTCGCTTCCGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
CDS CAA 72 bp GCCAACCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: ANLGSNSLVRRK*RMGAKTVGSLS
Trigger: CGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599716.5
CDS CAA 72 bp CAGGGTCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: QGLGSNSLVRRK*RMGAKTVGSLS
Trigger: CGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599575.5
ENST00000600552.5
CDS CAA 90 bp GAACCGTGGACACCCCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCGATGAAGATC +
Preference number: 6 (lower is better)
Translates to: EPWTPLGSNSLVRRK*RMGAKTVGSLSMKI
Trigger: GATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597325.1
CDS GCA 72 bp AGGCCACCAATGTCATTGCCAGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGAGCCAGGATCTTAAAG +
Preference number: 6 (lower is better)
Translates to: RPPMSLPALQPP*PSADSRARILK
Trigger: CTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593764.5
CDS GCA 72 bp CCACCTGCAATGTCATTGCCAGCACTGCAGCCGCCATaGCCATCTGCCGACTCCAGAGCCAGGATCTTAAAG +
Preference number: 6 (lower is better)
Translates to: PPAMSLPALQPP*PSADSRARILK
Trigger: CTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGCAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS CCA 72 bp ATGCCGCGGAAGCGAGTCACAGACCATGTCCGCACGTaGTTGTTGTCGGCACAGACTGAGATGAGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: MPRKRVTDHVRT*LLSAQTEMRCF
Trigger: GAAGCACCTCATCTCAGTCTGTGCCGACAACAACCACGTGCGGACATGGTCTGTGACTCGCTTCCGCGGCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
CDS CCA 72 bp GGGCTTCATGGAGGAGGCTGGAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGAGGTCAGGGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: GLHGGGWNRGHP*VVELTRGQGLG
Trigger: TCCCAGACCCTGACCTCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599575.5
ENST00000600552.5
CDS CAA 72 bp CGGAAGCGAGTCACAGACCATGTCCGCACGTGGTTGTaGTCGGCACAGACTGAGATGAGGTGCTTCTCCGAC +
Preference number: 6 (lower is better)
Translates to: RKRVTDHVRTWL*SAQTEMRCFSD
Trigger: GTCGGAGAAGCACCTCATCTCAGTCTGTGCCGACAACAACCACGTGCGGACATGGTCTGTGACTCGCTTCCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
CDS CAA 72 bp GACGAACTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: DELGSNSLVRRK*RMGAKTVGSLS
Trigger: CGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGTTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595631.5
ENST00000598558.5
CDS CAA 72 bp CTCGAAGCTGCAGGCGACGAACTGGGATCCAACTCTTaGGTGCGCAGGAAGTTGAGGATGGGGGCGAAGACT +
Preference number: 6 (lower is better)
Translates to: LEAAGDELGSNS*VRRKLRMGAKT
Trigger: AGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGTTCGTCGCCTGCAGCTTCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595631.5
ENST00000598558.5
CDS CAA 72 bp GGCCAGCTCACAGTGTTCCAGCTGTTCCATCAGCTCTaGCTCCGTCAGGCCACCTGCAATGTCATTGCCAGC +
Preference number: 6 (lower is better)
Translates to: GQLTVFQLFHQL*LRQATCNVIAS
Trigger: GCTGGCAATGACATTGCAGGTGGCCTGACGGAGCAAGAGCTGATGGAACAGCTGGAACACTGTGAGCTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600320.5
ENST00000600718.5
CDS CAA 72 bp CCTGCTGAGATGAGGTGCTTCTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGCACAGTGAAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: PAEMRCFSDSMI*VTGLRCTVKVW
Trigger: CCAGACCTTCACTGTGCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGAGAAGCACCTCATCTCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594298.5
CDS CAA 90 bp GAACCGTGGACACCCCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: EPWTPLGSNSLVRRK*RMGAKTVGSLSMKI
Trigger: AATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291842.10
ENST00000594973.5
ENST00000595945.5
ENST00000600718.5
ENST00000600733.5
CDS CAA 90 bp GCTGCAGGCGACGAACTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: AAGDELGSNSLVRRK*RMGAKTVGSLSMKI
Trigger: AATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGTTCGTCGCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595631.5
ENST00000598558.5
CDS GCA 72 bp AATGTCATTGCCAGCACTGCAGCCGCCATGCCCATCTaGCGACTCCAGAGCCAGGATCTTAAAGGAAGCGAG +
Preference number: 6 (lower is better)
Translates to: NVIASTAAAMPI*RLQSQDLKGSE
Trigger: CTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597396.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
ENST00000602011.5
CDS CCA 72 bp GGGCTTCATGGAGGAGGCTGGAACCGTGGACACCCCTaGGTAGTAGAATTGACTAGAGGTCAGGGTCTAGGT +
Preference number: 6 (lower is better)
Translates to: GLHGGGWNRGHP*VVELTRGQGLG
Trigger: ACCTAGACCCTGACCTCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS CAA 72 bp CAGACTGAGATGAGGTGCTTCTCCGACAGCATGATCTaGGTGACAGGGCTGCGGTGCACAGTGAAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: QTEMRCFSDSMI*VTGLRCTVKVW
Trigger: CCAGACCTTCACTGTGCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000291842.10
ENST00000593764.5
ENST00000594973.5
ENST00000596163.5
ENST00000597649.5
ENST00000598201.5
ENST00000599833.1
ENST00000600320.5
ENST00000600718.5
ENST00000600733.5
ENST00000600791.5
CDS CAA 72 bp GGCCAGCTCACAGTGTTCCAGCTGTTCCATCAGCTCTaGCTCCGTCAGGCCACCAATGTCATTGCCAGCACT +
Preference number: 6 (lower is better)
Translates to: GQLTVFQLFHQL*LRQATNVIAST
Trigger: AGTGCTGGCAATGACATTGGTGGCCTGACGGAGCAAGAGCTGATGGAACAGCTGGAACACTGTGAGCTGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593764.5
CDS CAA 72 bp AGAATGCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: RMLGSNSLVRRK*RMGAKTVGSLS
Trigger: CGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGCATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS CAA 90 bp CTTCATGGAGGAGGCTGGAACCGTGGACACCCCTGGGTAGTAGAATaGACTAGAGGTCAGGGTCTAGGTGTGGGGGTGAACAGAGAATGC +
Preference number: 6 (lower is better)
Translates to: LHGGGWNRGHPWVVE*TRGQGLGVGVNREC
Trigger: GCATTCTCTGTTCACCCCCACACCTAGACCCTGACCTCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS CCA 72 bp CTGGAGAAGAAGGAGTCTGGGATCCAGGTGAGAGTCTaGCGAGAGGTACTGAATCTGGGCGGGGAAGGTAAA +
Preference number: 6 (lower is better)
Translates to: LEKKESGIQVRV*REVLNLGGEGK
Trigger: TTTACCTTCCCCGCCCAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCCTTCTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000595523.5
ENST00000595631.5
ENST00000597325.1
ENST00000598558.5
ENST00000600552.5
CDS CAA 72 bp GGAGGCTGGAACCGTGGACACCCCTGGGTAGTAGAATaGACTAGAGGTCAGGGTCTGGGATCCAACTCTTTG +
Preference number: 6 (lower is better)
Translates to: GGWNRGHPWVVE*TRGQGLGSNSL
Trigger: CAAAGAGTTGGATCCCAGACCCTGACCTCTAGTCAATTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599575.5
ENST00000600552.5
CDS CAA 90 bp ACTAGAGGTCAGGGTCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: TRGQGLGSNSLVRRK*RMGAKTVGSLSMKI
Trigger: AATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGACCCTGACCTCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599575.5
ENST00000600552.5
CDS GCA 72 bp TTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTaGAGGCGACGAACTGCAACAGGAGGACCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: FPQEDRSNSSRS*RRRTATGGPEE
Trigger: CTCCTCTGGTCCTCCTGTTGCAGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595945.5
CDS CCA 72 bp CTGGAGAAGAAGGAGTCTGGGATCCAGGTGAGAGTCTaGCGAGAGGTACTGAATCTCTTGCCTCCCACATTC +
Preference number: 6 (lower is better)
Translates to: LEKKESGIQVRV*REVLNLLPPTF
Trigger: GAATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCCTTCTTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291842.10
ENST00000595803.5
ENST00000595945.5
ENST00000599575.5
ENST00000599716.5
ENST00000600718.5
ENST00000600733.5
CDS CAA 90 bp GGTGAACAGAGAATGCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: GEQRMLGSNSLVRRK*RMGAKTVGSLSMKI
Trigger: AATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGCATTCTCTGTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595523.5
CDS GCA 72 bp TTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTaGAGGCGACGAACTGGGATCCAACTCTTTGGTGCG +
Preference number: 6 (lower is better)
Translates to: FPQEDRSNSSRS*RRRTGIQLFGA
Trigger: CGCACCAAAGAGTTGGATCCCAGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595631.5
ENST00000598558.5
CDS CAA 90 bp TTTTTCCATGCCAACCTGGGATCCAACTCTTTGGTGCGCAGGAAGTaGAGGATGGGGGCGAAGACTGTAGGGTCCCTGTCGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: FFHANLGSNSLVRRK*RMGAKTVGSLSMKI
Trigger: AATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGTTGGCATGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000595803.5
ENST00000599716.5
CDS GCA 72 bp TTTCCACAAGAAGATCGATCCAACTCCTCTCGAAGCTaGAGGCGACGAACTGCAACAGGAGGACTTAAAGGC +
Preference number: 6 (lower is better)
Translates to: FPQEDRSNSSRS*RRRTATGGLKG
Trigger: GCCTTTAAGTCCTCCTGTTGCAGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598907.5
CDS CAA 72 bp GATCCAGTTCCCACTGTCACCTGTAATTCCAGCACTTaGGGAGACGACGAGAGGAGAATCCCAGGAGTTCAA +
Preference number: 6 (lower is better)
Translates to: DPVPTVTCNSST*GDDERRIPGVQ
Trigger: TTGAACTCCTGGGATTCTCCTCTCGTCGTCTCCCAAAGTGCTGGAATTACAGGTGACAGTGGGAACTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597649.5
CDS CCA 72 bp ATCCAGTTCCCACTGTCACCTGTAATTCCAGCACTTTaGGAGACGACGAGAGGAGAATCCCAGGAGTTCAAA +
Preference number: 6 (lower is better)
Translates to: IQFPLSPVIPAL*ETTRGESQEFK
Trigger: TTTGAACTCCTGGGATTCTCCTCTCGTCGTCTCCCAAAGTGCTGGAATTACAGGTGACAGTGGGAACTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597649.5