Pregenerated sensors for SHISAL2B (Homo sapiens)
Ensembl gene IDs: ENSG00000145642Ensembl transcript IDs: ENST00000389074.6, ENST00000506473.5, ENST00000509189.5, ENST00000512767.5, ENST00000513930.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACACAGACACTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAGGCACCAATGGTCATTaGAAAGTAATGATCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: TQTLMTKASKTRAAIPSPGTNGH*KVMIFF Trigger: GAAAAAGATCATTACTTTTCAATGACCATTGGTGCC...TGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAGTGTCTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCAATCAAGGCACCAATaGTCATTGAAAAGTAATGAT | + |
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Preference number: 2 (lower is better) Translates to: TKASKTRAAIPSPIKAPMQSRHQ*SLKSND Trigger: ATCATTACTTTTCAATGACCATTGGTGCCTTGATTG...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| 3UTR-3UTR CAA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACATTATCTTCCTGGCTaGCCTTTAGGCTTCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LMTKASKTRAAIPSPIKAHYLPG*PLGFCS Trigger: AGAGCAGAAGCCTAAAGGCAAGCCAGGAAGATAATG...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCGCAATACTGGAGCGCTaGCCCCTCGCCGCGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMVAILER*PLAAPG Trigger: CCCCGGCGCGGCGAGGGGGCAGCGCTCCAGTATTGC...GACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR GCA 90 bp | AGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGTGCAATACTGGAGCGCTaGCCCCTCGCCGCGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RRVKQGQQFLVQSRHQCCAILER*PLAAPG Trigger: CCCCGGCGCGGCGAGGGGGCAGCGCTCCAGTATTGC...ACAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGCCCGCGGACCCCTCTaGCCGGACTCGGCTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TKASKTRAAIPSPIKAPMARGPL*PDSALP Trigger: CGGAAGAGCCGAGTCCGGGCAGAGGGGTCCGCGGGC...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGGCGAGGGCCCCGGTCTaGTCTCGGATCGCACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMLARAPV*SRIAPV Trigger: GACGGGTGCGATCCGAGAGCAGACCGGGGCCCTCGC...CAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGTGGGCTCTGGCTGCCTaGGCGCTCAGCCTTCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMLWALAA*ALSLRA Trigger: CGCGCGAAGGCTGAGCGCCCAGGCAGCCAGAGCCCA...CAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | ACACAGACACTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAGCGAGGGCCCCGGTCTaGTCTCGGATCGCACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTLMTKASKTRAAIPSPARAPV*SRIAPV Trigger: GACGGGTGCGATCCGAGAGCAGACCGGGGCCCTCGC...TGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAGTGTCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCGCGCCGGGGGCACTaGAAGGGCTCCACGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMTKASKTRAAIPSPIKAPRRGH*KGSTKL Trigger: GAGCTTCGTGGAGCCCTTCCAGTGCCCCCGGCGCGG...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | ACACAGACACTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCACCGCGCCGGGGGCACTaGAAGGGCTCCACGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTLMTKASKTRAAIPSPPRRGH*KGSTKL Trigger: GAGCTTCGTGGAGCCCTTCCAGTGCCCCCGGCGCGG...TGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAGTGTCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCGGAGCACAGTCGGCTaGCCTCGCTCATCGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKASKTRAAIPSPIKAPMRSTVG*PRSSRA Trigger: TGCCCGCGATGAGCGAGGCCAGCCGACTGTGCTCCG...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCAGATCTGGGCTCTGGCTaGCTGGGCGCTCAGCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LMTKASKTRAAIPSPIKADLGSG*LGAQPS Trigger: CGAAGGCTGAGCGCCCAGGCAGCCAGAGCCCAGATC...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCATCGGCTCTTCCGATCTaGGCTCTGGCTGCCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LMTKASKTRAAIPSPIKASALPI*ALAAWA Trigger: CGCCCAGGCAGCCAGAGCCCAGATCGGAAGAGCCGA...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | AAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAAAGTCGGAGCACAGTCGGCTaGCCTCGCTCATCGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQQFLVQSRHQWSLKSRSTVG*PRSSRA Trigger: TGCCCGCGATGAGCGAGGCCAGCCGACTGTGCTCCG...ACTTTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR TCA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCCACGAAGCTCTGGTTaGGGCTGTAGTAGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKASKTRAAIPSPIKAPMPRSSG*GCSSRS Trigger: GCTCCGGCTACTACAGCCTCAACCAGAGCTTCGTGG...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGTTCGCGCGCCACCTCTaGTTTCTCTCCTCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMLFARHL*FLSSPC Trigger: ACAAGGGGAGGAGAGAAATCAGAGGTGGCGCGCGAA...CAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGTGTAGGGGAAGTAGCTaGCCGGCTCGCTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKASKTRAAIPSPIKAPMCRGSS*PARCSS Trigger: ACTGCTGCAGCGAGCCGGGCAGCTACTTCCCCTACA...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR GCA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCATGTAGGGGAAGTAGCTaGCCGGCTCGCTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMTKASKTRAAIPSPIKACRGSS*PARCSS Trigger: ACTGCTGCAGCGAGCCGGGCAGCTACTTCCCCTACA...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR CCA 90 bp | GTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAAAAGCCGCAGCAATACTaGAGCGCTGCCCCCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VKQGQQFLVQSRHQWSLKKPQQY*SAAPSP Trigger: CGGCGAGGGGGCAGCGCTCCAGTATTGCTGCGGCTT...TTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR TCA 90 bp | GTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAACCACGAAGCTCTGGTTaGGGCTGTAGTAGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKQGQQFLVQSRHQWSLKPRSSG*GCSSRS Trigger: GCTCCGGCTACTACAGCCTCAACCAGAGCTTCGTGG...TTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR TCA 90 bp | AGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGTCTGACAAGTTTGACCTaGGGCTCCACATGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RRVKQGQQFLVQSRHQCCLTSLT*GSTCSC Trigger: ACAGCTACATGTGGAGCCTCAGGTCAAACTTGTCAG...ACAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGTTTGACTTGCCTTCTTaGGTGGAAGAAGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKASKTRAAIPSPIKAPMFDLPS*VEEASK Trigger: CTTAGAGGCTTCTTCCACTCAAGAAGGCAAGTCAAA...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCATTTGACTTGCCTTCTTaGGTGGAAGAAGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMTKASKTRAAIPSPIKAFDLPS*VEEASK Trigger: CTTAGAGGCTTCTTCCACTCAAGAAGGCAAGTCAAA...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | AAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAAAGCTGACAAGTTTGACCTaGGGCTCCACATGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KTRAAIPSPIKAPMVIEKLTSLT*GSTCSC Trigger: ACAGCTACATGTGGAGCCTCAGGTCAAACTTGTCAG...CTTTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR CCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCACTTGCCTTCTTGAGTaGAAGAAGCCTCTAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMVTCLLE*KKPLSV Trigger: AACACTTAGAGGCTTCTTCCACTCAAGAAGGCAAGT...GACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR CCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGACTTGCCTTCTTGAGTaGAAGAAGCCTCTAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMLTCLLE*KKPLSV Trigger: AACACTTAGAGGCTTCTTCCACTCAAGAAGGCAAGT...CAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | GTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAAGAAGCCTCTAAGTGTTaGAGCTTAAGGCCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VKQGQQFLVQSRHQWSLKEASKC*SLRPVS Trigger: AGACACTGGCCTTAAGCTTCAACACTTAGAGGCTTC...TTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR TCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCTTTGGTTTTTCCATTTaGCTTGCCTTCTTGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMVFGFSI*LAFLSG Trigger: TCCACTCAAGAAGGCAAGTCAAATGGAAAAACCAAA...GACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR TCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGTTTGGTTTTTCCATTTaGCTTGCCTTCTTGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMLFGFSI*LAFLSG Trigger: TCCACTCAAGAAGGCAAGTCAAATGGAAAAACCAAA...CAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGCCAGTGTCTAATCTTTaGGGTTTCGTATACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMLPVSNL*GFVYRN Trigger: ATTTCTGTATACGAAACCTCAAAGATTAGACACTGG...CAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR TCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCGGCACCAATGGTCATTaGAAAGTAATGATCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMVGTNGH*KVMIFF Trigger: GAAAAAGATCATTACTTTTCAATGACCATTGGTGCC...GACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR CCA 90 bp | AAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCCAATCAAGGCACCAATaGTCATTGAAAAGTAATGAT | + |
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Preference number: 4 (lower is better) Translates to: KASKTRAAIPSPIKAPMVQSRHQ*SLKSND Trigger: ATCATTACTTTTCAATGACCATTGGTGCCTTGATTG...GACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR TCA 90 bp | AAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAAAGCCAGTGTCTAATCTTTaGGGTTTCGTATACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KTRAAIPSPIKAPMVIEKPVSNL*GFVYRN Trigger: ATTTCTGTATACGAAACCTCAAAGATTAGACACTGG...CTTTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS GCA 90 bp | CTCATCGCGGGCAGGGGCCGGGAGAGGCTCGCGAGGGCCCCGGTCTaGTCTCGGATCGCACCCGTCCAGCACCTCCAGAGCCCGCGGACC | + |
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Preference number: 5 (lower is better) Translates to: LIAGRGRERLARAPV*SRIAPVQHLQSPRT Trigger: GGTCCGCGGGCTCTGGAGGTGCTGGACGGGTGCGATCCGAGAGCAGACCGGGGCCCTCGCGAGCCTCTCCCGGCCCCTGCCCGCGATGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389074.6 ENST00000506473.5 ENST00000509189.5 |
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| CDS GCA 90 bp | CTCGGATCGCACCCGTCCAGCACCTCCAGAGCCCGCGGACCCCTCTaGCCGGACTCGGCTCTTCCGATCTGGGCTCTGGCTGCCTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LGSHPSSTSRARGPL*PDSALPIWALAAWA Trigger: CGCCCAGGCAGCCAGAGCCCAGATCGGAAGAGCCGAGTCCGGGCAGAGGGGTCCGCGGGCTCTGGAGGTGCTGGACGGGTGCGATCCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS CCA 90 bp | TCCAGAGCCCGCGGACCCCTCTGCCCGGACTCGGCTCTTCCGATCTaGGCTCTGGCTGCCTGGGCGCTCAGCCTTCGCGCGCCACCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SRARGPLCPDSALPI*ALAAWALSLRAPPL Trigger: CAGAGGTGGCGCGCGAAGGCTGAGCGCCCAGGCAGCCAGAGCCCAGATCGGAAGAGCCGAGTCCGGGCAGAGGGGTCCGCGGGCTCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS TCA 90 bp | CCTCGCCGCGCCGGGGGCACTGGAAGGGCTCCACGAAGCTCTGGTTaGGGCTGTAGTAGCCGGAGCACAGTCGGCTGGCCTCGCTCATCG | + |
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Preference number: 5 (lower is better) Translates to: PRRAGGTGRAPRSSG*GCSSRSTVGWPRSS Trigger: CGATGAGCGAGGCCAGCCGACTGTGCTCCGGCTACTACAGCCTCAACCAGAGCTTCGTGGAGCCCTTCCAGTGCCCCCGGCGCGGCGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389074.6 ENST00000506473.5 ENST00000509189.5 |
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| CDS GCA 90 bp | CGGACCCCTCTGCCCGGACTCGGCTCTTCCGATCTGGGCTCTGGCTaGCTGGGCGCTCAGCCTTCGCGCGCCACCTCTGATTTCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RTPLPGLGSSDLGSG*LGAQPSRATSDFSP Trigger: AGGAGAGAAATCAGAGGTGGCGCGCGAAGGCTGAGCGCCCAGGCAGCCAGAGCCCAGATCGGAAGAGCCGAGTCCGGGCAGAGGGGTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS GCA 90 bp | GGTAGGGGTCAGATCCTCCAAAAAGTGCAAGTCGTAAAGCCCAGTTaGTTGCACAGGCCCTCAGGAACACACACACACACACACACACAC | + |
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Preference number: 5 (lower is better) Translates to: GRGQILQKVQVVKPS*LHRPSGTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTTCCTGAGGGCCTGTGCAAGCAACTGGGCTTTACGACTTGCACTTTTTGGAGGATCTGACCCCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000512767.5 ENST00000513930.1 |
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| CDS CCA 90 bp | GCACCAATGCTTAGAAAGTCTCTTCACATTCCAGCAATAGCCACATaGCTCGGGTTTCAAGAAAGGGGGTGTCCTGTTCTACAGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: APMLRKSLHIPAIAT*LGFQERGCPVLQSV Trigger: CACACTCTGTAGAACAGGACACCCCCTTTCTTGAAACCCGAGCCATGTGGCTATTGCTGGAATGTGAAGAGACTTTCTAAGCATTGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512767.5 |
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| CDS-3UTR CAA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCATTATCTTCCTGGCTaGCCTTTAGGCTTCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: TKASKTRAAIPSPIKAPMHYLPG*PLGFCS Trigger: AGAGCAGAAGCCTAAAGGCAAGCCAGGAAGATAATG...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS CCA 90 bp | ACAGAGTGTGTGTATAATCATAGCAACCAAAAGCTGTACCTTTCTTaGTGTCGCTTCAATTCTCTCCAGGGTAGGGGTCAGATCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: TECVYNHSNQKLYLS*CRFNSLQGRGQILQ Trigger: TTGGAGGATCTGACCCCTACCCTGGAGAGAATTGAAGCGACACCAAGAAAGGTACAGCTTTTGGTTGCTATGATTATACACACACTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512767.5 |
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| CDS-3UTR CAA 90 bp | AGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGCTGTCTTTGGTTTTTCCATTaGACTTGCCTTCTTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RRVKQGQQFLVQSRHQCCLWFFH*TCLLEW Trigger: CCACTCAAGAAGGCAAGTCAAATGGAAAAACCAAAG...ACAGCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR CAA 90 bp | ACACAGACACTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCACTTTGGTTTTTCCATTaGACTTGCCTTCTTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: TQTLMTKASKTRAAIPSPLWFFH*TCLLEW Trigger: CCACTCAAGAAGGCAAGTCAAATGGAAAAACCAAAG...TGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAGTGTCTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS-3UTR CAA 90 bp | AAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGGTCATTGAAAAGTCATTATCTTCCTGGCTaGCCTTTAGGCTTCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KQGQQFLVQSRHQWSLKSHYLPG*PLGFCS Trigger: AGAGCAGAAGCCTAAAGGCAAGCCAGGAAGATAATG...ACTTTTCAATGACCATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506473.5 |
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| CDS-3UTR CAA 90 bp | CTGATGACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCAGCACCAATGCTGTATTaGGAACATACGTCATTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LMTKASKTRAAIPSPIKAAPMLY*EHTSLK Trigger: TTTCAATGACGTATGTTCCAAATACAGCATTGGTGC...TGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGTCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS-3UTR CAA 90 bp | ACAAAGGCGAGTAAAACAAGGGCAGCAATTCCTAGTCCAATCAAGGCACCAATGTTTGAATTGAGGGCTTaGGTTTTTCCATTTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: TKASKTRAAIPSPIKAPMFELRA*VFPFDL Trigger: CAAGTCAAATGGAAAAACCAAAGCCCTCAATTCAAA...CATTGGTGCCTTGATTGGACTAGGAATTGCTGCCCTTGTTTTACTCGCCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506473.5 ENST00000509189.5 |
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| CDS GCA 72 bp | GGCAGGGGCCGGGAGAGGCTCGCGAGGGCCCCGGTCTaGTCTCGGATCGCACCCGTCCAGCACCTCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRGRERLARAPV*SRIAPVQHLQS Trigger: GCTCTGGAGGTGCTGGACGGGTGCGATCCGAGAGCAGACCGGGGCCCTCGCGAGCCTCTCCCGGCCCCTGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389074.6 ENST00000506473.5 ENST00000509189.5 |
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| CDS CCA 72 bp | CGCGGACCCCTCTGCCCGGACTCGGCTCTTCCGATCTaGGCTCTGGCTGCCTGGGCGCTCAGCCTTCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RGPLCPDSALPI*ALAAWALSLRA Trigger: CGCGCGAAGGCTGAGCGCCCAGGCAGCCAGAGCCCAGATCGGAAGAGCCGAGTCCGGGCAGAGGGGTCCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS GCA 72 bp | CTTGAGGTCGGCGAAGCCGCAGCAATACTGGAGCGCTaGCCCCTCGCCGCGCCGGGGGCACTGGAAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LEVGEAAAILER*PLAAPGALEGL Trigger: GAGCCCTTCCAGTGCCCCCGGCGCGGCGAGGGGGCAGCGCTCCAGTATTGCTGCGGCTTCGCCGACCTCAAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389074.6 ENST00000506473.5 ENST00000509189.5 |
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| CDS GCA 72 bp | CACCCGTCCAGCACCTCCAGAGCCCGCGGACCCCTCTaGCCGGACTCGGCTCTTCCGATCTGGGCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HPSSTSRARGPL*PDSALPIWALA Trigger: AGCCAGAGCCCAGATCGGAAGAGCCGAGTCCGGGCAGAGGGGTCCGCGGGCTCTGGAGGTGCTGGACGGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS GCA 72 bp | CTGCCCGGACTCGGCTCTTCCGATCTGGGCTCTGGCTaGCTGGGCGCTCAGCCTTCGCGCGCCACCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LPGLGSSDLGSG*LGAQPSRATSD Trigger: ATCAGAGGTGGCGCGCGAAGGCTGAGCGCCCAGGCAGCCAGAGCCCAGATCGGAAGAGCCGAGTCCGGGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509189.5 |
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| CDS TCA 72 bp | GCCGGGGGCACTGGAAGGGCTCCACGAAGCTCTGGTTaGGGCTGTAGTAGCCGGAGCACAGTCGGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AGGTGRAPRSSG*GCSSRSTVGWP Trigger: AGGCCAGCCGACTGTGCTCCGGCTACTACAGCCTCAACCAGAGCTTCGTGGAGCCCTTCCAGTGCCCCCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389074.6 ENST00000506473.5 ENST00000509189.5 |
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| CDS CAA 90 bp | AGGGGTCAGATCCTCCAAAAAGTGCAAGTCGTAAAGCCCAGTTGCTaGCACAGGCCCTCAGGAACACACACACACACACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: RGQILQKVQVVKPSC*HRPSGTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTGAGGGCCTGTGCAAGCAACTGGGCTTTACGACTTGCACTTTTTGGAGGATCTGACCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000512767.5 ENST00000513930.1 |
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| CDS GCA 72 bp | CAGATCCTCCAAAAAGTGCAAGTCGTAAAGCCCAGTTaGTTGCACAGGCCCTCAGGAACACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: QILQKVQVVKPS*LHRPSGTHTHT Trigger: TGTGTGTGTGTGTGTTCCTGAGGGCCTGTGCAAGCAACTGGGCTTTACGACTTGCACTTTTTGGAGGATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512767.5 ENST00000513930.1 |
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| CDS CAA 72 bp | TCAGATCCTCCAAAAAGTGCAAGTCGTAAAGCCCAGTaGCTTGCACAGGCCCTCAGGAACACACACACACAC | + |
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Preference number: 6 (lower is better) Translates to: SDPPKSASRKAQ*LAQALRNTHTH Trigger: GTGTGTGTGTGTGTTCCTGAGGGCCTGTGCAAGCAACTGGGCTTTACGACTTGCACTTTTTGGAGGATCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512767.5 ENST00000513930.1 |
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| CDS CCA 72 bp | CTTAGAAAGTCTCTTCACATTCCAGCAATAGCCACATaGCTCGGGTTTCAAGAAAGGGGGTGTCCTGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LRKSLHIPAIAT*LGFQERGCPVL Trigger: TAGAACAGGACACCCCCTTTCTTGAAACCCGAGCCATGTGGCTATTGCTGGAATGTGAAGAGACTTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512767.5 |
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| CDS CCA 72 bp | GTGTATAATCATAGCAACCAAAAGCTGTACCTTTCTTaGTGTCGCTTCAATTCTCTCCAGGGTAGGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VYNHSNQKLYLS*CRFNSLQGRGQ Trigger: CTGACCCCTACCCTGGAGAGAATTGAAGCGACACCAAGAAAGGTACAGCTTTTGGTTGCTATGATTATACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512767.5 |
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