RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHISA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000187902

Ensembl transcript IDs: ENST00000376325.10, ENST00000376325.9, ENST00000416792.2

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGAGAGGTTGCTGGGTTGACCCTGTCACCAATCAGATGGCTGGGTaGGGGACAGCGCTGCTGTCAGGAGGGGCCTGGGTGCCTCACCGG +
Preference number: 1 (lower is better)
Translates to: MRGCWVDPVTNQMAG*GTALLSGGAWVPHR
Trigger: CCGGTGAGGCACCCAGGCCCCTCCTGACAGCAGCGCTGTCCCTCACCCAGCCATCTGATTGGTGACAGGGTCAACCCAGCAACCTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 90 bp TCCCCGGGTGTTAAGGTGTTAGGGAGGGAGGTGAAGGAGCACCCCTaGTCCCGCAGATGTGCTGGCAGGGACCATTGCTCTCCAGTGTCC +
Preference number: 1 (lower is better)
Translates to: SPGVKVLGREVKEHP*SRRCAGRDHCSPVS
Trigger: GGACACTGGAGAGCAATGGTCCCTGCCAGCACATCTGCGGGACCAGGGGTGCTCCTTCACCTCCCTCCCTAACACCTTAACACCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp AGTCGGTCACCAGCTTTGACCTATCCCGCGGGGGTCAGGGATCTCTaGGGAGAATTTGGCCGGGGCCAGTGGAGTGCTGATCCTGGTAGG +
Preference number: 1 (lower is better)
Translates to: SRSPALTYPAGVRDL*GEFGRGQWSADPGR
Trigger: CCTACCAGGATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGATCCCTGACCCCCGCGGGATAGGTCAAAGCTGGTGACCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp GGCCAGCAGAAGACAGCACTGAAGGCCCCAGTCGGTCACCAGCTTTaGCCTATCCCGCGGGGGTCAGGGATCTCTGAGGAGAATTTGGCC +
Preference number: 1 (lower is better)
Translates to: GQQKTALKAPVGHQL*PIPRGSGISEENLA
Trigger: GGCCAAATTCTCCTCAGAGATCCCTGACCCCCGCGGGATAGGTCAAAGCTGGTGACCGACTGGGGCCTTCAGTGCTGTCTTCTGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 90 bp CAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCCTCTCTaGTCTCTGGCATCTTCCCTGGGGTGGTCCTGGACTCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: QRCFLQTTSQDRAPL*SLASSLGWSWTLGL
Trigger: CAGGCCCAGAGTCCAGGACCACCCCAGGGAAGATGCCAGAGAGCAGAGAGGGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR GCA 90 bp CATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCCAGCGATaGTTCCTTCAGACAACATCTCAGGACAGGGCCCCTCTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: HHLWRRPSTWAAPQR*FLQTTSQDRAPLCS
Trigger: AGAGCAGAGAGGGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 90 bp CCTGGGAGCAGAAGGCCATCTGGAGGTCCTGTCTCCCAGGAGTCATaGCACAGATGTGGGATCCAAGGCCCCATTTCCCCTCAGAGGGTC +
Preference number: 1 (lower is better)
Translates to: PGSRRPSGGPVSQES*HRCGIQGPISPQRV
Trigger: GACCCTCTGAGGGGAAATGGGGCCTTGGATCCCACATCTGTGCCATGACTCCTGGGAGACAGGACCTCCAGATGGCCTTCTGCTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp GATGGCCTTCCAGAGTGGGCAGTGCCTCTGAGGAGGAAGCTCTGGTaGTGCCATCACAGCATTGGGGGTAGGGGTGTCACTGCCAACAGC +
Preference number: 1 (lower is better)
Translates to: DGLPEWAVPLRRKLW*CHHSIGGRGVTANS
Trigger: GCTGTTGGCAGTGACACCCCTACCCCCAATGCTGTGATGGCATCACCAGAGCTTCCTCCTCAGAGGCACTGCCCACTCTGGAAGGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR GCA 90 bp TCTCTGGCATCTTCCCTGGGGTGGTCCTGGACTCTGGGCCTGCCCTaGCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGTGC +
Preference number: 1 (lower is better)
Translates to: SLASSLGWSWTLGLP*LLQHGGSSGGISLC
Trigger: GCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACCACCCCAGGGAAGATGCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 90 bp GCACCAGGGCCCAGGTGGATTTGGGTAACCCCCATTTCCTCAGTGTaGTGGGAACCAAGGGCCAGTTGTCTGCCCCAAGCTCCTGACAAG +
Preference number: 1 (lower is better)
Translates to: APGPRWIWVTPISSV*WEPRASCLPQAPDK
Trigger: CTTGTCAGGAGCTTGGGGCAGACAACTGGCCCTTGGTTCCCACCACACTGAGGAAATGGGGGTTACCCAAATCCACCTGGGCCCTGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp GTGACACCACCAATACCGATGGCCTTCCAGAGTGGGCAGTGCCTCTaGGGAGGAAGCTCTGGTGATGCCATCACAGCATTGGGGGTAGGG +
Preference number: 1 (lower is better)
Translates to: VTPPIPMAFQSGQCL*GGSSGDAITALGVG
Trigger: CCCTACCCCCAATGCTGTGATGGCATCACCAGAGCTTCCTCCTCAGAGGCACTGCCCACTCTGGAAGGCCATCGGTATTGGTGGTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 90 bp CCAACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATaGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGAC +
Preference number: 1 (lower is better)
Translates to: PTAYTDHHLWRRPST*AAPQRCFLQTTSQD
Trigger: GTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 90 bp AAGGCCATCTGGAGGTCCTGTCTCCCAGGAGTCATGGCACAGATGTaGGATCCAAGGCCCCATTTCCCCTCAGAGGGTCTGGCAGAGATC +
Preference number: 1 (lower is better)
Translates to: KAIWRSCLPGVMAQM*DPRPHFPSEGLAEI
Trigger: GATCTCTGCCAGACCCTCTGAGGGGAAATGGGGCCTTGGATCCCACATCTGTGCCATGACTCCTGGGAGACAGGACCTCCAGATGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 90 bp CCAGGGCCCAGGTGGATTTGGGTAACCCCCATTTCCTCAGTGTGGTaGGAACCAAGGGCCAGTTGTCTGCCCCAAGCTCCTGACAAGAAG +
Preference number: 1 (lower is better)
Translates to: PGPRWIWVTPISSVW*EPRASCLPQAPDKK
Trigger: CTTCTTGTCAGGAGCTTGGGGCAGACAACTGGCCCTTGGTTCCCACCACACTGAGGAAATGGGGGTTACCCAAATCCACCTGGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp TTTGAGATCAAATCAAGGCCCCAGGGTCAGGCAGCCTGTGCCAACTaGATAGGGACAGGGCTAGGGGTGGGATCCCTGGAATCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: FEIKSRPQGQAACAN*IGTGLGVGSLESRL
Trigger: CAGCCTGGATTCCAGGGATCCCACCCCTAGCCCTGTCCCTATTCAGTTGGCACAGGCTGCCTGACCCTGGGGCCTTGATTTGATCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 90 bp CTCAGAGGGTCTGGCAGAGATCCTGCTGGACATGTCCCTGGAGTCTaGGGAGGGAGCAACCAAGCTAAGTCATGGTGGGACAAGGCAGTA +
Preference number: 1 (lower is better)
Translates to: LRGSGRDPAGHVPGV*GGSNQAKSWWDKAV
Trigger: TACTGCCTTGTCCCACCATGACTTAGCTTGGTTGCTCCCTCCCCAGACTCCAGGGACATGTCCAGCAGGATCTCTGCCAGACCCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 90 bp CATGTCCCTGGAGTCTGGGGAGGGAGCAACCAAGCTAAGTCATGGTaGGACAAGGCAGTAACTCTGGTGACACCACCAATACCGATGGCC +
Preference number: 1 (lower is better)
Translates to: HVPGVWGGSNQAKSW*DKAVTLVTPPIPMA
Trigger: GGCCATCGGTATTGGTGGTGTCACCAGAGTTACTGCCTTGTCCCACCATGACTTAGCTTGGTTGCTCCCTCCCCAGACTCCAGGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp CAAGTGACAGGGATTGGGCAGGGGGCAGTGGCGTCACCTGAGGGTTaGAATGCTTCCTCTCTGGTGATAATGAGAGGTTGCTGGGTTGAC +
Preference number: 1 (lower is better)
Translates to: QVTGIGQGAVASPEG*NASSLVIMRGCWVD
Trigger: GTCAACCCAGCAACCTCTCATTATCACCAGAGAGGAAGCATTTCAACCCTCAGGTGACGCCACTGCCCCCTGCCCAATCCCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 90 bp GGACATGTCCCTGGAGTCTGGGGAGGGAGCAACCAAGCTAAGTCATaGTGGGACAAGGCAGTAACTCTGGTGACACCACCAATACCGATG +
Preference number: 1 (lower is better)
Translates to: GHVPGVWGGSNQAKS*WDKAVTLVTPPIPM
Trigger: CATCGGTATTGGTGGTGTCACCAGAGTTACTGCCTTGTCCCACCATGACTTAGCTTGGTTGCTCCCTCCCCAGACTCCAGGGACATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 90 bp TTGTGGGTCATAGGTAATCCTGGGGAAGGATTCCATCCTCAGACATaGGTAACACTTGACCCCGGGTGTGGTGCCATCATGAGTGGCGGG +
Preference number: 1 (lower is better)
Translates to: LWVIGNPGEGFHPQT*VTLDPGCGAIMSGG
Trigger: CCCGCCACTCATGATGGCACCACACCCGGGGTCAAGTGTTACCCATGTCTGAGGATGGAATCCTTCCCCAGGATTACCTATGACCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp GGGTTGAAATGCTTCCTCTCTGGTGATAATGAGAGGTTGCTGGGTTaGCCCTGTCACCAATCAGATGGCTGGGTGAGGGACAGCGCTGCT +
Preference number: 1 (lower is better)
Translates to: GLKCFLSGDNERLLG*PCHQSDGWVRDSAA
Trigger: AGCAGCGCTGTCCCTCACCCAGCCATCTGATTGGTGACAGGGTCAACCCAGCAACCTCTCATTATCACCAGAGAGGAAGCATTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 90 bp CCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGTaGCATCTCAGAGCACATAGCATCTGGGCGACATCACAGAAGGGA +
Preference number: 1 (lower is better)
Translates to: PCLLQHGGSSGGISL*HLRAHSIWATSQKG
Trigger: TCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR GCA 90 bp TATGGCAGAAAGAAAAGTGAGGCCAGGCTATGGGACACCTATGAGTaGCAGAACTCCAGGATCCTGGTGATCCAGAGTGGCCTCCTGGGA +
Preference number: 1 (lower is better)
Translates to: YGRKKSEARLWDTYE*QNSRILVIQSGLLG
Trigger: TCCCAGGAGGCCACTCTGGATCACCAGGATCCTGGAGTTCTGGCACTCATAGGTGTCCCATAGCCTGGCCTCACTTTTCTTTCTGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 90 bp AGGTCCCAGCTCAAGACATGTGGAGGGGAATTGTCAGTACACACCTaGTCCCACCCCTCAAGACCTCTCTCCTCTATGGCTTATTTGAGA +
Preference number: 1 (lower is better)
Translates to: RSQLKTCGGELSVHT*SHPSRPLSSMAYLR
Trigger: TCTCAAATAAGCCATAGAGGAGAGAGGTCTTGAGGGGTGGGAGCAGGTGTGTACTGACAATTCCCCTCCACATGTCTTGAGCTGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp TTCCTCTGGGATGACATCATGGGAAGGAGGCCTTGGCTCAAGCAGTaGAGTAATAGGAGGAGGAATCTTGTCTGCCAGGACATCCCAGAA +
Preference number: 1 (lower is better)
Translates to: FLWDDIMGRRPWLKQ*SNRRRNLVCQDIPE
Trigger: TTCTGGGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR TCA 90 bp CTTGGAGTTAGAGATGACATCATCCAGGTGAGATTGTCTCTGCAGTaGCACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGT +
Preference number: 1 (lower is better)
Translates to: LGVRDDIIQVRLSLQ*HHRKECHGTRRRLC
Trigger: ACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCACTGCAGAGACAATCTCACCTGGATGATGTCATCTCTAACTCCAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 90 bp CCAGGTGAGATTGTCTCTGCAGTGACACCACAGGAAGGAATGTCATaGAACAAGGCGTCGTCTCTGTTATTATACCACAAGAAGGAAGCC +
Preference number: 1 (lower is better)
Translates to: PGEIVSAVTPQEGMS*NKASSLLLYHKKEA
Trigger: GGCTTCCTTCTTGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCACTGCAGAGACAATCTCACCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR TCA 90 bp TTAGTGGAAACGGGAATATGGCCTGTTGTGCTGGTTCCCCTTAAGTaGACAACTGTAAGTACCATGCGGCCCCAGAGGACAACTGAAATA +
Preference number: 1 (lower is better)
Translates to: LVETGIWPVVLVPLK*TTVSTMRPQRTTEI
Trigger: TATTTCAGTTGTCCTCTGGGGCCGCATGGTACTTACAGTTGTTCACTTAAGGGGAACCAGCACAACAGGCCATATTCCCGTTTCCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 90 bp ATGATGCCAAAAGAGGCCTTGGAGTTAGAGATGACATCATCCAGGTaGGATTGTCTCTGCAGTGACACCACAGGAAGGAATGTCATGGAA +
Preference number: 1 (lower is better)
Translates to: MMPKEALELEMTSSR*DCLCSDTTGRNVME
Trigger: TTCCATGACATTCCTTCCTGTGGTGTCACTGCAGAGACAATCTCACCTGGATGATGTCATCTCTAACTCCAAGGCCTCTTTTGGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp ACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCTGGGCCCCAGGCCCCTaGCATGTGTGCGCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: TAYTDHHLWRRPSTWAAPWAPGP*HVCACV
Trigger: GACACAGGCGCACACATGCCAGGGGCCTGGGGCCCA...GGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR TCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTCATGGCCTCCAGCGCTaGCCTCACGGGCCGGCCTCT +
Preference number: 2 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISHGLQR*PHGPAS
Trigger: AGAGGCCGGCCCGTGAGGTCAGCGCTGGAGGCCATG...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp ACCCCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCGGGGCTGGGAGGGGGTaGGTGCTCAAGCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: TPKSRQLEKAECSAEVLSGAGRG*VLKLAP
Trigger: AGGAGCCAGCTTGAGCACCCACCCCCTCCCAGCCCC...GCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR GCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTGGCCCCTGGCATGTGTaGGCCTGTGTCGGGGGATCC +
Preference number: 2 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISGPWHV*ACVGGS
Trigger: GGATCCCCCGACACAGGCGCACACATGCCAGGGGCC...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp GGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGTGGGCCCCAGGCCCCTaGCATGTGTGCGCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: GVGVSLPTAYTDHHLWRRWAPGP*HVCACV
Trigger: GACACAGGCGCACACATGCCAGGGGCCTGGGGCCCA...CCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp AGGCACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCGTCCAAGGGCCGATCTaGGCCCCAGGCCCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: RHGPSDDVIGQGTFSGDGVQGPI*APGPWH
Trigger: ATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGAC...GCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR GCA 90 bp ACCCCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCGCTGGCAGGGACCATTaGTCTCCAGTGTCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: TPKSRQLEKAECSAEVLSAGRDH*SPVSLL
Trigger: CAGCAGGGACACTGGAGAGCAATGGTCCCTGCCAGC...GCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp ATCTCTGAGGAGAATTTGGCCGGGGCCAGTGGAGTGCTGATCCTGGTAGGGGCCGATGGCCTTCCAGAGTaGGCAGTGCCTCTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: ISEENLAGASGVLILVGADGLPE*AVPLRR
Trigger: CCTCCTCAGAGGCACTGCCCACTCTGGAAGGCCATC...GGCCCCTACCAGGATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp ATCTCTGAGGAGAATTTGGCCGGGGCCAGTGGAGTGCTGATCCTGGTAGGGGCCTCCAGAGTGGCCTCCTaGGAGCAGAAGGCCATCTGG +
Preference number: 2 (lower is better)
Translates to: ISEENLAGASGVLILVGASRVAS*EQKAIW
Trigger: CCAGATGGCCTTCTGCTCCCAGGAGGCCACTCTGGA...GGCCCCTACCAGGATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR GCA 90 bp GGGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGACAGGGCCCCTCTCTaGTCTCTGGCATCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GGRGVTANSLHRPSSLEEDRAPL*SLASSL
Trigger: CAGGGAAGATGCCAGAGAGCAGAGAGGGGCCCTGTC...CTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp CATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCGGACACCATAGAACATaGACATGGCCTCCAGCGCTG +
Preference number: 2 (lower is better)
Translates to: HGRLPSDASFRQHLRTGPGHHRT*TWPPAL
Trigger: CAGCGCTGGAGGCCATGTCCATGTTCTATGGTGTCC...GGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp ACCCCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCGGAGAGGTCCCAGAGTaGGTGGTCATCTCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: TPKSRQLEKAECSAEVLSGEVPE*VVISGD
Trigger: ATCACCAGAGATGACCACCCACTCTGGGACCTCTCC...GCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp AAGAGAATTGAGGGAAGATTGTGCATTGGGTGCTGGGGACTTCCTGCCACCCCCGGTGGTCCTGGACTCTaGGCCTGCCCTGCCTTCTAC +
Preference number: 2 (lower is better)
Translates to: KRIEGRLCIGCWGLPATPGGPGL*ACPAFY
Trigger: GTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACCACC...GGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR GCA 90 bp CATGGCGATGATGCCAAAAGAGGCCTTGGAGTTAGAGATGACATCATCCAGGTGGGCCCCTGGCATGTGTaGGCCTGTGTCGGGGGATCC +
Preference number: 2 (lower is better)
Translates to: HGDDAKRGLGVRDDIIQVGPWHV*ACVGGS
Trigger: GGATCCCCCGACACAGGCGCACACATGCCAGGGGCC...CACCTGGATGATGTCATCTCTAACTCCAAGGCCTCTTTTGGCATCATCGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR GCA 90 bp GGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGGCGGCTCCCCAGCGATaGTTCCTTCAGACAACATCT +
Preference number: 2 (lower is better)
Translates to: GVGVSLPTAYTDHHLWRRAAPQR*FLQTTS
Trigger: AGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGC...CCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp CTGACAAGAAGGAGTGTGAGGTGCCAGTGTTTGCGGGGAGACATAAGAGGGAGGCTCTGGCATCTTCCCTaGGGTGGTCCTGGACTCTGG +
Preference number: 2 (lower is better)
Translates to: LTRRSVRCQCLRGDIRGRLWHLP*GGPGLW
Trigger: CCAGAGTCCAGGACCACCCCAGGGAAGATGCCAGAG...CCTCCCTCTTATGTCTCCCCGCAAACACTGGCACCTCACACTCCTTCTTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp ATCTCTGAGGAGAATTTGGCCGGGGCCAGTGGAGTGCTGATCCTGGTAGGGGCCTTCCATCCTCAGACATaGGTAACACTTGACCCCGGG +
Preference number: 2 (lower is better)
Translates to: ISEENLAGASGVLILVGAFHPQT*VTLDPG
Trigger: CCCGGGGTCAAGTGTTACCCATGTCTGAGGATGGAA...GGCCCCTACCAGGATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp CTGACAAGAAGGAGTGTGAGGTGCCAGTGTTTGCGGGGAGACATAAGAGGGAGGTTGTGCATTGGGTGCTaGGGACTTCCTGCCACCCCC +
Preference number: 2 (lower is better)
Translates to: LTRRSVRCQCLRGDIRGRLCIGC*GLPATP
Trigger: GGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAA...CCTCCCTCTTATGTCTCCCCGCAAACACTGGCACCTCACACTCCTTCTTGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR TCA 90 bp GACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGACATCAAGGCACCTTCTCTGGTaGTGGCATCACAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: DLLLERSQSGWSSLVMTSRHLLW*WHHRKE
Trigger: CTCCTTCCTGTGATGCCATCACCAGAGAAGGTGCCT...TGATGTCATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR TCA 90 bp CCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCAGAGAGAGGTTGCTGGGTTaGCCCTGTCACCAATCAGAT +
Preference number: 2 (lower is better)
Translates to: PKSRQLEKAECSAEVLSRERLLG*PCHQSD
Trigger: ATCTGATTGGTGACAGGGTCAACCCAGCAACCTCTC...TCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR GCA 90 bp ACCCCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCCAGAGGCATCTTCTCTaGTGCAAAGACACAGGGAGA +
Preference number: 2 (lower is better)
Translates to: TPKSRQLEKAECSAEVLSQRHLL*CKDTGR
Trigger: TCTCCCTGTGTCTTTGCAGCAGAGAAGATGCCTCTG...GCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp CCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCAGATGGTGCCATCATGAGTaGCGGGTGTTGTGTGATGCT +
Preference number: 2 (lower is better)
Translates to: PKSRQLEKAECSAEVLSRWCHHE*RVLCDA
Trigger: AGCATCACACAACACCCGCCACTCATGATGGCACCA...TCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp CCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCAGAGTGGAAACGGGAATATaGCCTGTTGTGCTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: PKSRQLEKAECSAEVLSRVETGI*PVVLVP
Trigger: GGGAACCAGCACAACAGGCCATATTCCCGTTTCCAC...TCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CAA 90 bp CACACCTGCTCCCACCCCTCAAGACCTCTCTCCTCTATGGCTTATTaGAGATCAAATCAAGGCCCCAGGGTCAGGCAGCCTGTGCCAACT +
Preference number: 2 (lower is better)
Translates to: HTCSHPSRPLSSMAY*RSNQGPRVRQPVPT
Trigger: AGTTGGCACAGGCTGCCTGACCCTGGGGCCTTGATTTGATCTCAAATAAGCCATAGAGGAGAGAGGTCTTGAGGGGTGGGAGCAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR TCA 90 bp GACCCCGGGTGTGGTGCCATCATGAGTGGCGGGTGTTGTGTGATGCTGACAGTGAGATTGTCTCTGCAGTaGCACCACAGGAAGGAATGT +
Preference number: 2 (lower is better)
Translates to: DPGCGAIMSGGCCVMLTVRLSLQ*HHRKEC
Trigger: ACATTCCTTCCTGTGGTGTCACTGCAGAGACAATCT...CACTGTCAGCATCACACAACACCCGCCACTCATGATGGCACCACACCCGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR GCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTAGGAGGAATCTTGTCTaGCAGGACATCCCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISRRNLV*QDIPEG
Trigger: TCCTTCTGGGATGTCCTGGCAGACAAGATTCCTCCT...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp CACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCATCTCTGGGATGACATCATaGGAAGGAGGCCTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: HGPSDDVIGQGTFSGDGISGMTS*EGGLGS
Trigger: TGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGA...GATGCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp GGGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGTCTGTGATGACCTCATaGGAACGAGGCTTTGTCCCT +
Preference number: 2 (lower is better)
Translates to: GGRGVTANSLHRPSSLEESVMTS*ERGFVP
Trigger: AGGGACAAAGCCTCGTTCCCATGAGGTCATCACAGA...CTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp ACATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTCATAGAACATGGACATaGCCTCCAGCGCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: TSQKGPPPGEVPEWVVISHRTWT*PPALTS
Trigger: TGAGGTCAGCGCTGGAGGCCATGTCCATGTTCTATG...AGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CAA 90 bp CTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTaGTGCCATCTCAGAGCACATAGCATCTGGGCGACATCACAGAAG +
Preference number: 2 (lower is better)
Translates to: LPCLLQHGGSSGGIS*CHLRAHSIWATSQK
Trigger: CTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CAA 90 bp AAGTCTCAGATGACGAGGTCCCAGCTCAAGACATGTGGAGGGGAATaGTCAGTACACACCTGCTCCCACCCCTCAAGACCTCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: KSQMTRSQLKTCGGE*SVHTCSHPSRPLSS
Trigger: AGAGGAGAGAGGTCTTGAGGGGTGGGAGCAGGTGTGTACTGACAATTCCCCTCCACATGTCTTGAGCTGGGACCTCGTCATCTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR TCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTATGACATCATCCAGGTaGGATTGTCTCTGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISMTSSR*DCLCSD
Trigger: GTCACTGCAGAGACAATCTCACCTGGATGATGTCAT...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR TCA 90 bp GACCCCGGGTGTGGTGCCATCATGAGTGGCGGGTGTTGTGTGATGCTGACAGTGCCTGTGATGATGTTGTaGAAAGGGGACCTTATGTCT +
Preference number: 2 (lower is better)
Translates to: DPGCGAIMSGGCCVMLTVPVMML*KGDLMS
Trigger: AGACATAAGGTCCCCTTTTCACAACATCATCACAGG...CACTGTCAGCATCACACAACACCCGCCACTCATGATGGCACCACACCCGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp GACCCCGGGTGTGGTGCCATCATGAGTGGCGGGTGTTGTGTGATGCTGACAGTGAACCAAGCTAAGTCATaGTGGGACAAGGCAGTAACT +
Preference number: 2 (lower is better)
Translates to: DPGCGAIMSGGCCVMLTVNQAKS*WDKAVT
Trigger: AGTTACTGCCTTGTCCCACCATGACTTAGCTTGGTT...CACTGTCAGCATCACACAACACCCGCCACTCATGATGGCACCACACCCGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR GCA 90 bp AGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGAGGCATCTTCTCTGCTaGAAAGACACAGGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: RRDLLLERSQSGWSSLVMRHLLC*KDTGRK
Trigger: TTTTCTCCCTGTGTCTTTGCAGCAGAGAAGATGCCT...CATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp AAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAAGAAGGAAGGTCCAAGGGCCGATCTaGGCCCCAGGCCCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KECHGTRRRLCYYTTRRKVQGPI*APGPWH
Trigger: ATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGAC...CTTCCTTCTTGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp AAGAGAATTGAGGGAAGATTGTGCATTGGGTGCTGGGGACTTCCTGCCACCCCCGGGCATCATGGGTCTTaGGAGGTGATGACACCAAAA +
Preference number: 2 (lower is better)
Translates to: KRIEGRLCIGCWGLPATPGHHGS*EVMTPK
Trigger: TTTTGGTGTCATCACCTCCCAAGACCCATGATGCCC...GGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CAA 90 bp GAAGGAGGCCTTGGCTCAAGCAGTGAAGTAATAGGAGGAGGAATCTaGTCTGCCAGGACATCCCAGAAGGAGGCTTTCACTCCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: EGGLGSSSEVIGGGI*SARTSQKEAFTPVQ
Trigger: TTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR TCA 90 bp CCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCAGAAATCCTGGAAGAAGATaGTACCATAGTTGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: PKSRQLEKAECSAEVLSRNPGRR*YHSCGS
Trigger: TGACCCACAACTATGGTATCATCTTCTTCCAGGATT...TCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp ATCTCTTTGTGCCATCTCAGAGCACATAGCATCTGGGCGACATCACAGAAGGGAGGACACCATAGAACATaGACATGGCCTCCAGCGCTG +
Preference number: 2 (lower is better)
Translates to: ISLCHLRAHSIWATSQKGGHHRT*TWPPAL
Trigger: CAGCGCTGGAGGCCATGTCCATGTTCTATGGTGTCC...TCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR-3UTR CCA 90 bp AAGAGAATTGAGGGAAGATTGTGCATTGGGTGCTGGGGACTTCCTGCCACCCCCTATGGCCTGTTGTGCTaGTTCCCCTTAAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: KRIEGRLCIGCWGLPATPYGLLC*FPLSEQ
Trigger: TTGTTCACTTAAGGGGAACCAGCACAACAGGCCATA...GGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CCA 90 bp CTGACAAGAAGGAGTGTGAGGTGCCAGTGTTTGCGGGGAGACATAAGAGGGAGGAGGTGTAGTGGATTCTaGAAGGTAATGTCATCACTG +
Preference number: 2 (lower is better)
Translates to: LTRRSVRCQCLRGDIRGRRCSGF*KVMSSL
Trigger: CAGTGATGACATTACCTTCCAGAATCCACTACACCT...CCTCCCTCTTATGTCTCCCCGCAAACACTGGCACCTCACACTCCTTCTTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp GGCCCAGACCCCCAAATCCCGGCAGCTGGAGAAAGCTaGGTGTTCCGCGGAGGTGTTGAGCAGAGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: GPDPQIPAAGES*VFRGGVEQRGG
Trigger: CCCTCCCCTCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGGGGTCTGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 72 bp CACCCCTGGTCCCGCAGATGTGCTGGCAGGGACCATTaGTCTCCAGTGTCCCTGCTGCAGGATGAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: HPWSRRCAGRDH*SPVSLLQDEAS
Trigger: GCTGGCCTCATCCTGCAGCAGGGACACTGGAGAGCAATGGTCCCTGCCAGCACATCTGCGGGACCAGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp GGAGGTGAAGGAGCACCCCTGGTCCCGCAGATGTGCTaGCAGGGACCATTGCTCTCCAGTGTCCCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: GGEGAPLVPQMC*QGPLLSSVPAA
Trigger: TGCAGCAGGGACACTGGAGAGCAATGGTCCCTGCCAGCACATCTGCGGGACCAGGGGTGCTCCTTCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 72 bp TGGCATCTTCCCTGGGGTGGTCCTGGACTCTGGGCCTaGCCTGCCTTCTACAACATGGTGGCAGCAGTGGAG +
Preference number: 3 (lower is better)
Translates to: WHLPWGGPGLWA*PAFYNMVAAVE
Trigger: CTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACCACCCCAGGGAAGATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp GCTCTCTGGCATCTTCCCTGGGGTGGTCCTGGACTCTaGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: ALWHLPWGGPGL*ACPAFYNMVAA
Trigger: TGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACCACCCCAGGGAAGATGCCAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp AGACAACATCTCAGGACAGGGCCCCTCTCTGCTCTCTaGCATCTTCCCTGGGGTGGTCCTGGACTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RQHLRTGPLSAL*HLPWGGPGLWA
Trigger: GGCCCAGAGTCCAGGACCACCCCAGGGAAGATGCCAGAGAGCAGAGAGGGGCCCTGTCCTGAGATGTTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp GTGTCACTGCCAACAGCCTACACAGACCATCATCTCTaGAGGAGGCCCTCCACATGGGCGGCTCCCCAGCGA +
Preference number: 3 (lower is better)
Translates to: VSLPTAYTDHHL*RRPSTWAAPQR
Trigger: TCGCTGGGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR TCA 72 bp CCAGCTTTGACCTATCCCGCGGGGGTCAGGGATCTCTaGGGAGAATTTGGCCGGGGCCAGTGGAGTGCTGAT +
Preference number: 3 (lower is better)
Translates to: PALTYPAGVRDL*GEFGRGQWSAD
Trigger: ATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGATCCCTGACCCCCGCGGGATAGGTCAAAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp AAGACAGCACTGAAGGCCCCAGTCGGTCACCAGCTTTaGCCTATCCCGCGGGGGTCAGGGATCTCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: KTALKAPVGHQL*PIPRGSGISEE
Trigger: CTCCTCAGAGATCCCTGACCCCCGCGGGATAGGTCAAAGCTGGTGACCGACTGGGGCCTTCAGTGCTGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp CAGGGACCATTGCTCTCCAGTGTCCCTGCTGCAGGATaGGGCCAGCAGAAGACAGCACTGAAGGCCCCAGTC +
Preference number: 3 (lower is better)
Translates to: QGPLLSSVPAAG*GQQKTALKAPV
Trigger: GACTGGGGCCTTCAGTGCTGTCTTCTGCTGGCCTCATCCTGCAGCAGGGACACTGGAGAGCAATGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 72 bp GTCTGCCCCAAGCTCCTGACAAGAAGGAGTGTGAGGTaGCAGTGTTTGCGGGGAGACATAAGAGGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: VCPKLLTRRSVR*QCLRGDIRGRG
Trigger: CCCCCTCCCTCTTATGTCTCCCCGCAAACACTGGCACCTCACACTCCTTCTTGTCAGGAGCTTGGGGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp TGGAGGTCCTGTCTCCCAGGAGTCATGGCACAGATGTaGGATCCAAGGCCCCATTTCCCCTCAGAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: WRSCLPGVMAQM*DPRPHFPSEGL
Trigger: CAGACCCTCTGAGGGGAAATGGGGCCTTGGATCCCACATCTGTGCCATGACTCCTGGGAGACAGGACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CAA 90 bp AAAACTGGCACCAGGGCCCAGGTGGATTTGGGTAACCCCCATTTCCTCAGTGTGAGTCGGTCACCAGCTTaGACCTATCCCGCGGGGGTC +
Preference number: 3 (lower is better)
Translates to: KTGTRAQVDLGNPHFLSVSRSPA*TYPAGV
Trigger: GACCCCCGCGGGATAGGTCAAAGCTGGTGACCGACT...CACACTGAGGAAATGGGGGTTACCCAAATCCACCTGGGCCCTGGTGCCAGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CAA 90 bp CCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCAGAAGGATGGTGACACCATaGGCTATGGGGAGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: PKSRQLEKAECSAEVLSRRMVTP*AMGSLG
Trigger: GCCAAGACTCCCCATAGCCAATGGTGTCACCATCCT...TCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CAA 90 bp ATCTCTGAGGAGAATTTGGCCGGGGCCAGTGGAGTGCTGATCCTGGTAGGGGCCACATCTGTGGTGGGATaGATGCAGGCATCATCCTCG +
Preference number: 3 (lower is better)
Translates to: ISEENLAGASGVLILVGATSVVG*MQASSS
Trigger: CGAGGATGATGCCTGCATCAATCCCACCACAGATGT...GGCCCCTACCAGGATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp TGGGGAAGGATTCCATCCTCAGACATGGGTAACACTTaGCCCCGGGTGTGGTGCCATCATGAGTGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: WGRIPSSDMGNT*PRVWCHHEWRV
Trigger: CACCCGCCACTCATGATGGCACCACACCCGGGGTCAAGTGTTACCCATGTCTGAGGATGGAATCCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp CTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTaGCAGCAGTGGAGGCATCTCTTTGTGCCATCTCAG +
Preference number: 3 (lower is better)
Translates to: LDSGPALPSTTW*QQWRHLFVPSQ
Trigger: CTGAGATGGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp TACACAGACCATCATCTCTGGAGGAGGCCCTCCACATaGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACA +
Preference number: 3 (lower is better)
Translates to: YTDHHLWRRPST*AAPQRCFLQTT
Trigger: TGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp AGAAGGCCATCTGGAGGTCCTGTCTCCCAGGAGTCATaGCACAGATGTGGGATCCAAGGCCCCATTTCCCCT +
Preference number: 3 (lower is better)
Translates to: RRPSGGPVSQES*HRCGIQGPISP
Trigger: AGGGGAAATGGGGCCTTGGATCCCACATCTGTGCCATGACTCCTGGGAGACAGGACCTCCAGATGGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp CCCAGGTGGATTTGGGTAACCCCCATTTCCTCAGTGTaGTGGGAACCAAGGGCCAGTTGTCTGCCCCAAGCT +
Preference number: 3 (lower is better)
Translates to: PRWIWVTPISSV*WEPRASCLPQA
Trigger: AGCTTGGGGCAGACAACTGGCCCTTGGTTCCCACCACACTGAGGAAATGGGGGTTACCCAAATCCACCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CAA 90 bp AGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGATAGGAGGAGGAATCTaGTCTGCCAGGACATCCCAG +
Preference number: 3 (lower is better)
Translates to: RRDLLLERSQSGWSSLVMIGGGI*SARTSQ
Trigger: CTGGGATGTCCTGGCAGACAAGATTCCTCCTCCTAT...CATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR TCA 72 bp CCAATACCGATGGCCTTCCAGAGTGGGCAGTGCCTCTaGGGAGGAAGCTCTGGTGATGCCATCACAGCATTG +
Preference number: 3 (lower is better)
Translates to: PIPMAFQSGQCL*GGSSGDAITAL
Trigger: CAATGCTGTGATGGCATCACCAGAGCTTCCTCCTCAGAGGCACTGCCCACTCTGGAAGGCCATCGGTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp CCTGGAGTCTGGGGAGGGAGCAACCAAGCTAAGTCATaGTGGGACAAGGCAGTAACTCTGGTGACACCACCA +
Preference number: 3 (lower is better)
Translates to: PGVWGGSNQAKS*WDKAVTLVTPP
Trigger: TGGTGGTGTCACCAGAGTTACTGCCTTGTCCCACCATGACTTAGCTTGGTTGCTCCCTCCCCAGACTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp AGGTGGATTTGGGTAACCCCCATTTCCTCAGTGTGGTaGGAACCAAGGGCCAGTTGTCTGCCCCAAGCTCCT +
Preference number: 3 (lower is better)
Translates to: RWIWVTPISSVW*EPRASCLPQAP
Trigger: AGGAGCTTGGGGCAGACAACTGGCCCTTGGTTCCCACCACACTGAGGAAATGGGGGTTACCCAAATCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CAA 90 bp CCCAAATCCCGGCAGCTGGAGAAAGCTGAGTGTTCCGCGGAGGTGTTGAGCAGAAGAATTGAGGGAAGATaGTGCATTGGGTGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: PKSRQLEKAECSAEVLSRRIEGR*CIGCWG
Trigger: TCCCCAGCACCCAATGCACAATCTTCCCTCAATTCT...TCTGCTCAACACCTCCGCGGAACACTCAGCTTTCTCCAGCTGCCGGGATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp AGTGACAGGGATTGGGCAGGGGGCAGTGGCGTCACCTaGGGGTTGAAATGCTTCCTCTCTGGTGATAATGAG +
Preference number: 3 (lower is better)
Translates to: SDRDWAGGSGVT*GLKCFLSGDNE
Trigger: CTCATTATCACCAGAGAGGAAGCATTTCAACCCTCAGGTGACGCCACTGCCCCCTGCCCAATCCCTGTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp TCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTaGGTGGTCATCTCTGGTGATGACATCACAGGAAGA +
Preference number: 3 (lower is better)
Translates to: SQKGPPPGEVPE*VVISGDDITGR
Trigger: TCTTCCTGTGATGTCATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp GGCATCTCTTTGTGCCATCTCAGAGCACATAGCATCTaGGCGACATCACAGAAGGGACCTCCTCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: GISLCHLRAHSI*ATSQKGPPPGE
Trigger: CTCTCCAGGAGGAGGTCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CCA 72 bp GAAGTCTCAGATGACGAGGTCCCAGCTCAAGACATGTaGAGGGGAATTGTCAGTACACACCTGCTCCCACCC +
Preference number: 3 (lower is better)
Translates to: EVSDDEVPAQDM*RGIVSTHLLPP
Trigger: GGGTGGGAGCAGGTGTGTACTGACAATTCCCCTCCACATGTCTTGAGCTGGGACCTCGTCATCTGAGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp TGCTTCCTCTCTGGTGATAATGAGAGGTTGCTGGGTTaGCCCTGTCACCAATCAGATGGCTGGGTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: CFLSGDNERLLG*PCHQSDGWVRD
Trigger: GTCCCTCACCCAGCCATCTGATTGGTGACAGGGTCAACCCAGCAACCTCTCATTATCACCAGAGAGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 72 bp CTCAAGACATGTGGAGGGGAATTGTCAGTACACACCTaGTCCCACCCCTCAAGACCTCTCTCCTCTATGGCT +
Preference number: 3 (lower is better)
Translates to: LKTCGGELSVHT*SHPSRPLSSMA
Trigger: AGCCATAGAGGAGAGAGGTCTTGAGGGGTGGGAGCAGGTGTGTACTGACAATTCCCCTCCACATGTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR-3UTR CAA 90 bp CTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGATGCCAAAAGAGGCCTaGGAGTTAGAGATGACATCA +
Preference number: 3 (lower is better)
Translates to: LGLPCLLQHGGSSGGISLMPKEA*ELEMTS
Trigger: TGATGTCATCTCTAACTCCAAGGCCTCTTTTGGCAT...CAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR TCA 72 bp ACGGGAATATGGCCTGTTGTGCTGGTTCCCCTTAAGTaGACAACTGTAAGTACCATGCGGCCCCAGAGGACA +
Preference number: 3 (lower is better)
Translates to: TGIWPVVLVPLK*TTVSTMRPQRT
Trigger: TGTCCTCTGGGGCCGCATGGTACTTACAGTTGTTCACTTAAGGGGAACCAGCACAACAGGCCATATTCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 72 bp CTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGTaGCATCTCAGAGCACATAGCATCTGGGCGACATCA +
Preference number: 3 (lower is better)
Translates to: LQHGGSSGGISL*HLRAHSIWATS
Trigger: TGATGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR GCA 72 bp ACATGGCTATGTACAAAGAGAATTGAGGGAAGATTGTaGATTGGGTGCTGGGGACTTCCTGCCACCCCCGGA +
Preference number: 3 (lower is better)
Translates to: TWLCTKRIEGRL*IGCWGLPATPG
Trigger: TCCGGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTTTGTACATAGCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp ATAGGTAATCCTGGGGAAGGATTCCATCCTCAGACATaGGTAACACTTGACCCCGGGTGTGGTGCCATCATG +
Preference number: 3 (lower is better)
Translates to: IGNPGEGFHPQT*VTLDPGCGAIM
Trigger: CATGATGGCACCACACCCGGGGTCAAGTGTTACCCATGTCTGAGGATGGAATCCTTCCCCAGGATTACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp CCCTTTAAGAGTGGGGGAATGGCCGCCCCCGCAACATaGCTATGTACAAAGAGAATTGAGGGAAGATTGTGC +
Preference number: 3 (lower is better)
Translates to: PFKSGGMAAPAT*LCTKRIEGRLC
Trigger: GCACAATCTTCCCTCAATTCTCTTTGTACATAGCCATGTTGCGGGGGCGGCCATTCCCCCACTCTTAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp GATGACATCATGGGAAGGAGGCCTTGGCTCAAGCAGTaGAGTAATAGGAGGAGGAATCTTGTCTGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: DDIMGRRPWLKQ*SNRRRNLVCQD
Trigger: GTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTCCCATGATGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR TCA 72 bp GATGACACCATGGTTGTGAGGAATCATGGAGGATGGTaGCACCATTGGCTATGGGGAGTCTTGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: DDTMVVRNHGGW*HHWLWGVLADG
Trigger: ACCATCTGCCAAGACTCCCCATAGCCAATGGTGTCACCATCCTCCATGATTCCTCACAACCATGGTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR TCA 72 bp AACAACTGTAAGTACCATGCGGCCCCAGAGGACAACTaGAATACAGCCCGTCACGGTACTTGGCTCCTAAGA +
Preference number: 3 (lower is better)
Translates to: NNCKYHAAPEDN*NTARHGTWLLR
Trigger: TCTTAGGAGCCAAGTACCGTGACGGGCTGTATTTCAGTTGTCCTCTGGGGCCGCATGGTACTTACAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CCA 72 bp TCAGTAGAGGATGTCTCTGTCAGGTGTAGTGGATTCTaGAAGGTAATGTCATCACTGGTCATGGTGGAATCT +
Preference number: 3 (lower is better)
Translates to: SVEDVSVRCSGF*KVMSSLVMVES
Trigger: AGATTCCACCATGACCAGTGATGACATTACCTTCCAGAATCCACTACACCTGACAGAGACATCCTCTACTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR GCA 72 bp TGTAATGATGACATCATAGGACAGAGGCATCTTCTCTaGTGCAAAGACACAGGGAGAAAATATCTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: CNDDIIGQRHLL*CKDTGRKYLPH
Trigger: ATGGGGAAGATATTTTCTCCCTGTGTCTTTGCAGCAGAGAAGATGCCTCTGTCCTATGATGTCATCATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
CDS-3UTR TCA 90 bp CTCCTGTCCAAGGGCCGATCTGGGCCCCAGGCCCCTGGCATGTGTGCGCCTGTGCATGGCCTCCAGCGCTaGCCTCACGGGCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLSKGRSGPQAPGMCAPVHGLQR*PHGPAS
Trigger: AGAGGCCGGCCCGTGAGGTCAGCGCTGGAGGCCATG...CACAGGCGCACACATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGACAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp ACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCGGCTGCGGCGAGCCGTaGAGGGCGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TAYTDHHLWRRPSTWAAPGCGEP*RAWWWW
Trigger: CCACCACCACCACGCCCTGCACGGCTCGCCGCAGCC...GGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGGACATCCAGGCCGGCTaGGGCGAGCCGTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VLDSGPALPSTTWWQQWRDIQAG*GEPCRA
Trigger: CGCCCTGCACGGCTCGCCGCAGCCGGCCTGGATGTC...CCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GACATCCCAGAAGGAGGCTTTCACTCCTGTCCAAGGGCCGATCTGGGCCCCAGGCTGGCCGTGCGCAGGTaGTGGGGCAGGTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DIPEGGFHSCPRADLGPRLAVRR*WGRWWP
Trigger: GGGCCACCACCTGCCCCAGCACCTGCGCACGGCCAG...CCTGGGGCCCAGATCGGCCCTTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GGTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGGGGGCGGCAGAGTGTaGGGAGCAACAGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGLWACPAFYNMVAAVEGGGRV*GATGAR
Trigger: CCTGGCGCCTGTTGCTCCCCACACTCTGCCGCCCCC...CTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GGGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGGCCGGCATGGGGCTTaGAGGGGGTCGCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGRGVTANSLHRPSSLEEGRHGA*RGSHWA
Trigger: GGCCCAGTGCGACCCCCTGCAAGCCCCATGCCGGCC...CTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GCGACATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCGCAGCTGCTCCAGCGTaGCCTGGCGCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: ATSQKGPPPGEVPEWVVIAAAPA*PGAGRA
Trigger: CGCCCTTCCAGCGCCAGGGCACGCTGGAGCAGCTGC...GATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATGTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GACATCCCAGAAGGAGGCTTTCACTCCTGTCCAAGGGCCGATCTGGGCCCCAGGGGCCCCTGGCATGTGTaGGCCTGTGTCGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: DIPEGGFHSCPRADLGPRGPWHV*ACVGGS
Trigger: GGATCCCCCGACACAGGCGCACACATGCCAGGGGCC...CCTGGGGCCCAGATCGGCCCTTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGTGCCTGCGTGGGCCCAAGTTaGCCGCCCCACGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ACPAFYNMVAAVEASLCACVGPS*PPHARW
Trigger: CCACCGCGCGTGGGGCGGCCAACTTGGGCCCACGCA...GGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp GGTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGAAGGGCGGAGGGAGCTaGGCTGCGTGGGCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GPGLWACPAFYNMVAAVEKGGGS*AAWAQV
Trigger: AACTTGGGCCCACGCAGCTCAGCTCCCTCCGCCCTT...CTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGACACGACGTAGGCTGTaGTGCCCCCGGGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HHRRDLLLERSQSGWSSLTRRRL*CPRGPR
Trigger: GCGAGGGCCCCGGGGGCAGCACAGCCTACGTCGTGT...CAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGCGTGCAGGGGCAGCGTaGCGCGGGGCAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GVGVSLPTAYTDHHLWRRRAGAA*RGAIPG
Trigger: CCCTGGAATTGCCCCGCGGCACGCTGCCCCTGCACG...CCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGAGCAGCAGGTGCTCCTaGGACACCAGGCGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GVGVSLPTAYTDHHLWRRSSRCS*DTRRAR
Trigger: GCGCGCGCGCCTGGTGTCGCAGGAGCACCTGCTGCT...CCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GACATCCCAGAAGGAGGCTTTCACTCCTGTCCAAGGGCCGATCTGGGCCCCAGGGGTTCTTGGGCGTCCTaGGGGGCATGCTGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: DIPEGGFHSCPRADLGPRGSWAS*GACCRD
Trigger: GTCCCGACAGCATGCCCCCCAGGACGCCCAAGAACC...CCTGGGGCCCAGATCGGCCCTTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp AGGCACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCAGGTGCTCGCGACTCTaGCGCAGGGCCTCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: RHGPSDDVIGQGTFSGDGRCSRL*RRASGE
Trigger: CTCGCCCGAGGCCCTGCGCCAGAGTCGCGAGCACCT...GCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCTGCAGGGCGTGGTGGTaGTGGGCGTGCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HMGGSPAMLPSDNISGQGCRAWW*WACRLD
Trigger: GTCCAGCCTGCACGCCCACCACCACCACGCCCTGCA...GCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GGGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGCCGTGCAGGGCGTGGTaGTGGTGGGCGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGRGVTANSLHRPSSLEEPCRAW*WWACRL
Trigger: CAGCCTGCACGCCCACCACCACCACGCCCTGCACGG...CTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCAGGTGCTGGGGCAGGTaGTGGCCCGGGATGAACTGC +
Preference number: 4 (lower is better)
Translates to: HGRLPSDASFRQHLRTGPRCWGR*WPGMNC
Trigger: GCAGTTCATCCCGGGCCACCACCTGCCCCAGCACCT...GGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCTGGGCCCCAGGCCCCTaGCATGTGTGCGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HMGGSPAMLPSDNISGQGWAPGP*HVCACV
Trigger: GACACAGGCGCACACATGCCAGGGGCCTGGGGCCCA...GCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416792.2
3UTR CAA 72 bp CCTATCCCGCGGGGGTCAGGGATCTCTGAGGAGAATTaGGCCGGGGCCAGTGGAGTGCTGATCCTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PIPRGSGISEEN*AGASGVLILVG
Trigger: CCCTACCAGGATCAGCACTCCACTGGCCCCGGCCAAATTCTCCTCAGAGATCCCTGACCCCCGCGGGATAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
CDS-3UTR TCA 90 bp GCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGTGCCGAGCTCTGGGCACGTTaGTATCCCGGTGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ACPAFYNMVAAVEASLCAELWAR*YPGAPG
Trigger: CCCGGGCGCACCGGGATATCAACGTGCCCAGAGCTC...GGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp CTAGTGAGGACACAATCGGTGAGGCATTTTCCCCTGCGACGTGTCCCAGGAAGAGCGCGCGCGGCAGCGTaGACTCGTAGCGCGAACGGC +
Preference number: 4 (lower is better)
Translates to: LVRTQSVRHFPLRRVPGRARAAA*TRSANG
Trigger: GCCGTTCGCGCTACGAGTTCACGCTGCCGCGCGCGC...TCTTCCTGGGACACGTCGCAGGGGAAAATGCCTCACCGATTGTGTCCTCACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GGGGTAGGGGTGTCACTGCCAACAGCCTACACAGACCATCATCTCTGGAGGAGGCGGAGGGAGCTGAGCTaGGTGGGCCCAAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: GVGVSLPTAYTDHHLWRRRRELS*VGPSWP
Trigger: CGGCCAACTTGGGCCCACGCAGCTCAGCTCCCTCCG...CCTCCTCCAGAGATGATGGTCTGTGTAGGCTGTTGGCAGTGACACCCCTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CACATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCATCGCCCAGCAGGTaGTCCTGGGACATGACCCGC +
Preference number: 4 (lower is better)
Translates to: HMGGSPAMLPSDNISGQGPSPSR*SWDMTR
Trigger: GCGGGTCATGTCCCAGGAGCACCTGCTGGGCGATGG...GCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GCGACATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCGGGATGAACTGCAGCTaGTCCAGCGTGCCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: ATSQKGPPPGEVPEWVVIGMNCS*SSVPWR
Trigger: GCGCCAGGGCACGCTGGAGCAGCTGCAGTTCATCCC...GATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCCAGCGCTGCAGGGGGTCGCACTaGGCCGCCAGGCTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: HKKEASEDTIEHGHGLQRCRGSH*AARLRG
Trigger: TCCCCGCAGCCTGGCGGCCCAGTGCGACCCCCTGCA...GCGCTGGAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCATCCCCAGCAGGTGCTCCTaGGACATGACCCGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HGPSDDVIGQGTFSGDGIPSRCS*DMTRRG
Trigger: CCCCCGGCGGGTCATGTCCCAGGAGCACCTGCTGGG...GATGCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp AGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGAGGGCGTGGTGGTGGTaGGCGTGCAGGCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: RRDLLLERSQSGWSSLVMRAWWW*ACRLDG
Trigger: ACCGTCCAGCCTGCACGCCCACCACCACCACGCCCT...CATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GACATCCCAGAAGGAGGCTTTCACTCCTGTCCAAGGGCCGATCTGGGCCCCAGGGCATCTTCCCTGGGGTaGTCCTGGACTCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DIPEGGFHSCPRADLGPRASSLG*SWTLGL
Trigger: CAGGCCCAGAGTCCAGGACCACCCCAGGGAAGATGC...CCTGGGGCCCAGATCGGCCCTTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp AGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGCACGGGACGCCTTGCTaGAGGCCACTTTGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: RRDLLLERSQSGWSSLVMHGTPC*RPLWRR
Trigger: TCGGCGCCAAAGTGGCCTTCAGCAAGGCGTCCCGTG...CATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGACTGGGCCGCCAGGCTaGGGGGAGAACGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HHRRDLLLERSQSGWSSLTGPPG*GENESR
Trigger: TCTGCTCTCGTTCTCCCCGCAGCCTGGCGGCCCAGT...CAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CTAGTGAGGACACAATCGGTGAGGCATTTTCCCCTGCGACGTGTCCCAGGAAGAGGGGGCGACAGCAGGTaGTCGCGACTCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LVRTQSVRHFPLRRVPGRGGDSR*SRLWRR
Trigger: CCTGCGCCAGAGTCGCGAGCACCTGCTGTCGCCCCC...TCTTCCTGGGACACGTCGCAGGGGAAAATGCCTCACCGATTGTGTCCTCACTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp ACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCCAGTCACCTCGTTCTTaGTGGCCGTGCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TAYTDHHLWRRPSTWAAPQSPRS*WPCAGA
Trigger: AGCACCTGCGCACGGCCAGCAAGAACGAGGTGACTG...GGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp ACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCAGTGTGGCGGCGTGGTaGTTGGGGCTGTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: TAYTDHHLWRRPSTWAAPSVAAW*LGLLTL
Trigger: CAACGTCAACAGCCCCAAGCACCACGCCGCCACACT...GGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCCAGCGCAGTGCAAGGAGGGGCTaGGCGGCGGCAAGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: HKKEASEDTIEHGHGLQRSARRG*AAARLA
Trigger: GGCGAGCCTTGCCGCCGCCCAGCCCCTCCTTGCACT...GCGCTGGAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GCCATCTCAGAGCACATAGCATCTGGGCGACATCACAGAAGGGACCTCCTCCTGGTCCAAGGGCCGATCTaGGCCCCAGGCCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AISEHIASGRHHRRDLLLVQGPI*APGPWH
Trigger: ATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGAC...CAGGAGGAGGTCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTAGCCGGTGCTGCAGTTaGAGGTGGCGTCGTACTGGC +
Preference number: 4 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISSRCCS*RWRRTG
Trigger: GCCAGTACGACGCCACCTTCAACTGCAGCACCGGCT...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp CTCCTGTCCAAGGGCCGATCTGGGCCCCAGGCCCCTGGCATGTGTGCGCCTGTGAGATTGTCTCTGCAGTaGCACCACAGGAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: LLSKGRSGPQAPGMCAPVRLSLQ*HHRKEC
Trigger: ACATTCCTTCCTGTGGTGTCACTGCAGAGACAATCT...CACAGGCGCACACATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp CTCCTGTCCAAGGGCCGATCTGGGCCCCAGGCCCCTGGCATGTGTGCGCCTGTGATGACATCATCCAGGTaGGATTGTCTCTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LLSKGRSGPQAPGMCAPVMTSSR*DCLCSD
Trigger: GTCACTGCAGAGACAATCTCACCTGGATGATGTCAT...CACAGGCGCACACATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp GTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGAGGAGGAAGCTCTGGTaGTGCCATCACAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: VLDSGPALPSTTWWQQWRRRKLW*CHHSIG
Trigger: CCCAATGCTGTGATGGCATCACCAGAGCTTCCTCCT...CCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCCAGGCGAGAGATGAATaGGGGAGAAGCGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: HGRLPSDASFRQHLRTGPQARDE*GRSDWE
Trigger: CTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTG...GGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCCAGCGCGCGGCGTGTCGTAGTTaGAGCAGGAGGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: HKKEASEDTIEHGHGLQRAACRS*SRRPAP
Trigger: TGGCGCAGGCCTCCTGCTCCAACTACGACACGCCGC...GCGCTGGAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp AGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGCCCCTCTCTGCTCTCTaGCATCTTCCCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RRDLLLERSQSGWSSLVMPLSAL*HLPWGG
Trigger: ACCACCCCAGGGAAGATGCCAGAGAGCAGAGAGGGG...CATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp AGGCACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCGATGGCCTTCCAGAGTaGGCAGTGCCTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHGPSDDVIGQGTFSGDGDGLPE*AVPLRR
Trigger: CCTCCTCAGAGGCACTGCCCACTCTGGAAGGCCATC...GCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp CACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCCAGCGCTGCGCCAGGCGCATGTaGCGGTGCTCACAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HKKEASEDTIEHGHGLQRCARRM*RCSQQK
Trigger: CTTCTGCTGTGAGCACCGTCACATGCGCCTGGCGCA...GCGCTGGAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTCTCGGCCAGCCTCTTaGGGGAAGAGTAGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISSRPAS*GKSSGS
Trigger: TGAACCGCTACTCTTCCCTCAAGAGGCTGGCCGAGA...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp GCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTTGTGCCAGTGGGCAGTGCCTCTaGGGAGGAAGCTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ACPAFYNMVAAVEASLCASGQCL*GGSSGD
Trigger: ATCACCAGAGCTTCCTCCTCAGAGGCACTGCCCACT...GGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGTGATGACATCAAGCGGTAGTGGCAGGTaGCACAGCAGAAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: DLLLERSQSGWSSLVMTSSGSGR*HSRSGR
Trigger: CCTACCGCTTCTGCTGTGGCACCTGCCACTACCGCT...TGATGTCATCACCAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GCCATCTCAGAGCACATAGCATCTGGGCGACATCACAGAAGGGACCTCCTCCTGGACAGGGCCCCTCTCTaGTCTCTGGCATCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AISEHIASGRHHRRDLLLDRAPL*SLASSL
Trigger: CAGGGAAGATGCCAGAGAGCAGAGAGGGGCCCTGTC...CAGGAGGAGGTCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp GCGACATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCGCGGCTCCCCAGCGATaGTTCCTTCAGACAACATCT +
Preference number: 4 (lower is better)
Translates to: ATSQKGPPPGEVPEWVVIAAPQR*FLQTTS
Trigger: AGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGC...GATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp ACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTGCGGGAGAAGCGATTaGGAGGGTCGACAGACACCA +
Preference number: 4 (lower is better)
Translates to: TLGLPCLLQHGGSSGGISCGRSD*EGRQTP
Trigger: TGGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCA...AGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp ACATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTCGCGGTGGGCGACGATaGGAGAGTAATGGAAACGCG +
Preference number: 4 (lower is better)
Translates to: TSQKGPPPGEVPEWVVISRGGRR*ESNGNA
Trigger: CGCGTTTCCATTACTCTCCCATCGTCGCCCACCGCG...AGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp ACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCACATGGTGGCAGCAGTaGAGGCATCTCTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TAYTDHHLWRRPSTWAAPTWWQQ*RHLFVP
Trigger: TGGCACAAAGAGATGCCTCCACTGCTGCCACCATGT...GGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CCAGGACATCCCAGAAGGAGGCTTTCACTCCTGTCCAAGGGCCGATCTGGGCCCCTGCCTTCTACAACATaGTGGCAGCAGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PGHPRRRLSLLSKGRSGPLPSTT*WQQWRH
Trigger: ATGCCTCCACTGCTGCCACCATGTTGTAGAAGGCAG...GGGCCCAGATCGGCCCTTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCACAGACCATCATCTCTaGAGGAGGCCCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: HMGGSPAMLPSDNISGQGTDHHL*RRPSTW
Trigger: CCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGT...GCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp CACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAGGTGCTCCTGGGACATaGCCCGCCGGGGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: HHRKECHGTRRRLCYYTTGAPGT*PAGGWA
Trigger: CGCCCAACCCCCGGCGGGTCATGTCCCAGGAGCACC...TGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCAGGAGGAATCTTGTCTaGCAGGACATCCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: HGRLPSDASFRQHLRTGPRRNLV*QDIPEG
Trigger: TCCTTCTGGGATGTCCTGGCAGACAAGATTCCTCCT...GGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp ACAGCCTACACAGACCATCATCTCTGGAGGAGGCCCTCCACATGGGCGGCTCCCGGAGGCATCTCTTTGTaGCATCTCAGAGCACATAGC +
Preference number: 4 (lower is better)
Translates to: TAYTDHHLWRRPSTWAAPGGISL*HLRAHS
Trigger: GCTATGTGCTCTGAGATGGCACAAAGAGATGCCTCC...GGGAGCCGCCCATGTGGAGGGCCTCCTCCAGAGATGATGGTCTGTGTAGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CTAGTGAGGACACAATCGGTGAGGCATTTTCCCCTGCGACGTGTCCCAGGAAGACTCTGGCATCTTCCCTaGGGTGGTCCTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LVRTQSVRHFPLRRVPGRLWHLP*GGPGLW
Trigger: CCAGAGTCCAGGACCACCCCAGGGAAGATGCCAGAG...TCTTCCTGGGACACGTCGCAGGGGAAAATGCCTCACCGATTGTGTCCTCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp TTATACCACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCACGTTGATATCCCGGTaGGCCCGGGGCGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LYHKKEASEDTIEHGHGLTLISR*ARGARD
Trigger: GTCCCGTGCGCCCCGGGCGCACCGGGATATCAACGT...GAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTGGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CTTGGCTCAAGCAGTGAAGTAATAGGAGGAGGAATCTTGTCTGCCAGGACATCCGAGGACAGCAGCAGGTaGTCCTGCGACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LGSSSEVIGGGILSARTSEDSSR*SCDTRR
Trigger: GCGCCTGGTGTCGCAGGAGCACCTGCTGCTGTCCTC...GGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp TCTGGGATGACATCATGGGAAGGAGGCCTTGGCTCAAGCAGTGAAGTAATAGGACGTTCTTGCTGGCCGTaGGCAGGTGCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SGMTSWEGGLGSSSEVIGRSCWP*AGAGAG
Trigger: ACCTGCCCCAGCACCTGCGCACGGCCAGCAAGAACG...TCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp ACATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGGAGAGGTCCCAGAGTaGGTGGTCATCTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TSQKGPPPGEVPEWVVISGEVPE*VVISGD
Trigger: ATCACCAGAGATGACCACCCACTCTGGGACCTCTCC...AGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR GCA 90 bp CATGGGCGGCTCCCCAGCGATGCTTCCTTCAGACAACATCTCAGGACAGGGCCCAGGCATCTTCTCTGCTaGAAAGACACAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HGRLPSDASFRQHLRTGPRHLLC*KDTGRK
Trigger: TTTTCTCCCTGTGTCTTTGCAGCAGAGAAGATGCCT...GGGCCCTGTCCTGAGATGTTGTCTGAAGGAAGCATCGCTGGGGAGCCGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACACCCCAGACCCGGCCCTaGCCTCAGACAGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: HHRKECHGTRRRLCYYTTPQTRP*PQTVTS
Trigger: CGAGGTGACTGTCTGAGGCCAGGGCCGGGTCTGGGG...TGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CATCACAGAAGGGACCTCCTCCTGGAGAGGTCCCAGAGTGGGTGGTCATCTCTGTCTGTGATGACCTCATaGGAACGAGGCTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: HHRRDLLLERSQSGWSSLSVMTS*ERGFVP
Trigger: AGGGACAAAGCCTCGTTCCCATGAGGTCATCACAGA...CAGAGATGACCACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTCTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GTGACACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCTCGCCAGTCCAGTGTaGCGGCGTGGTGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: VTPQEGMSWNKASSLLLYLASPV*RRGAWG
Trigger: GCCCCAAGCACCACGCCGCCACACTGGACTGGCGAG...GTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
3UTR CAA 72 bp GGCTATGTACAAAGAGAATTGAGGGAAGATTGTGCATaGGGTGCTGGGGACTTCCTGCCACCCCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GYVQRELREDCA*GAGDFLPPPEA
Trigger: AGCCTCCGGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTTTGTACATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
3UTR CAA 72 bp ATGACGAGGTCCCAGCTCAAGACATGTGGAGGGGAATaGTCAGTACACACCTGCTCCCACCCCTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: MTRSQLKTCGGE*SVHTCSHPSRP
Trigger: AGGTCTTGAGGGGTGGGAGCAGGTGTGTACTGACAATTCCCCTCCACATGTCTTGAGCTGGGACCTCGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376325.9
CDS-3UTR TCA 90 bp TTCCCCTGCGACGTGTCCCAGGAAGATGGCTTTGTCTGTAATGATGACATCATAGTCCCAGGCCCCGCCTaGTGTCTCAGAATGTCCACC +
Preference number: 4 (lower is better)
Translates to: FPCDVSQEDGFVCNDDIIVPGPA*CLRMST
Trigger: GGTGGACATTCTGAGACATCAGGCGGGGCCTGGGAC...TATGATGTCATCATTACAGACAAAGCCATCTTCCTGGGACACGTCGCAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp AAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAAGAAGGAAGTGCTCCAGCGTGCCCTaGCGCTGGAAGGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: KECHGTRRRLCYYTTRRKCSSVP*RWKGGL
Trigger: CAGGCCGCCCTTCCAGCGCCAGGGCACGCTGGAGCA...CTTCCTTCTTGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCATCAGAGCACATAGCATCTaGGCGACATCACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HGPSDDVIGQGTFSGDGIRAHSI*ATSQKG
Trigger: TCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCT...GATGCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp TTATACCACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCGGTGGTCCTGGACTCTaGGCCTGCCCTGCCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LYHKKEASEDTIEHGHGLGGPGL*ACPAFY
Trigger: GTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACCACC...GAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTGGTATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
3UTR CAA 72 bp TGGCCGCCCCCGCAACATGGCTATGTACAAAGAGAATaGAGGGAAGATTGTGCATTGGGTGCTGGGGACTTC +
Preference number: 4 (lower is better)
Translates to: WPPPQHGYVQRE*REDCALGAGDF
Trigger: GAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTTTGTACATAGCCATGTTGCGGGGGCGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.9
CDS-3UTR GCA 90 bp CTTGGCTCAAGCAGTGAAGTAATAGGAGGAGGAATCTTGTCTGCCAGGACATCCCCTGGACTCTGGGCCTaGCCTGCCTTCTACAACATG +
Preference number: 4 (lower is better)
Translates to: LGSSSEVIGGGILSARTSPGLWA*PAFYNM
Trigger: CATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGG...GGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp TTCCCCTGCGACGTGTCCCAGGAAGATGGCTTTGTCTGTAATGATGACATCATACAGAGGTTGGAGCGCTaGGCGGGAGAGAAACGGTCA +
Preference number: 4 (lower is better)
Translates to: FPCDVSQEDGFVCNDDIIQRLER*AGEKRS
Trigger: TGACCGTTTCTCTCCCGCCCAGCGCTCCAACCTCTG...TATGATGTCATCATTACAGACAAAGCCATCTTCCTGGGACACGTCGCAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp TTATACCACAAGAAGGAAGCCTCTGAGGACACCATAGAACATGGACATGGCCTCGAGAGCAGGACAGCGTaGAGTAGTGCAAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LYHKKEASEDTIEHGHGLESRTA*SSARRG
Trigger: GCCCCTCCTTGCACTACTCCACGCTGTCCTGCTCTC...GAGGCCATGTCCATGTTCTATGGTGTCCTCAGAGGCTTCCTTCTTGTGGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAAGTCACCTCGTTCTTGCTaGCCGTGCGCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQEGMSWNKASSLLLYHKSPRSC*PCAGAG
Trigger: CCCAGCACCTGCGCACGGCCAGCAAGAACGAGGTGA...CTTGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp TTCCCCTGCGACGTGTCCCAGGAAGATGGCTTTGTCTGTAATGATGACATCATAGAAGGGACCTCCTCCTaGAGAGGTCCCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FPCDVSQEDGFVCNDDIIEGTSS*RGPRVG
Trigger: ACCCACTCTGGGACCTCTCCAGGAGGAGGTCCCTTC...TATGATGTCATCATTACAGACAAAGCCATCTTCCTGGGACACGTCGCAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CTAGTGAGGACACAATCGGTGAGGCATTTTCCCCTGCGACGTGTCCCAGGAAGAGCAGATTATCGAGGTTaGGGGTCTTCACGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVRTQSVRHFPLRRVPGRADYRG*GSSRCC
Trigger: ACAACACCGTGAAGACCCCCAACCTCGATAATCTGC...TCTTCCTGGGACACGTCGCAGGGGAAAATGCCTCACCGATTGTGTCCTCACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416792.2
3UTR CAA 72 bp CTTCTACAACATGGTGGCAGCAGTGGAGGCATCTCTTaGTGCCATCTCAGAGCACATAGCATCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LLQHGGSSGGIS*CHLRAHSIWAT
Trigger: TGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGATGCCTCCACTGCTGCCACCATGTTGTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
3UTR CAA 72 bp GCAACATGGCTATGTACAAAGAGAATTGAGGGAAGATaGTGCATTGGGTGCTGGGGACTTCCTGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: ATWLCTKRIEGR*CIGCWGLPATP
Trigger: GGGGGTGGCAGGAAGTCCCCAGCACCCAATGCACAATCTTCCCTCAATTCTCTTTGTACATAGCCATGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376325.9
CDS-3UTR CCA 90 bp GAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAAGAAGGAATGCTGGGGCAGGTGGTaGCCCGGGATGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: EGMSWNKASSLLLYHKKECWGRW*PGMNCS
Trigger: GCTGCAGTTCATCCCGGGCCACCACCTGCCCCAGCA...TTCCTTCTTGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CTTGGCTCAAGCAGTGAAGTAATAGGAGGAGGAATCTTGTCTGCCAGGACATCCGGACACCATAGAACATaGACATGGCCTCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LGSSSEVIGGGILSARTSGHHRT*TWPPAL
Trigger: CAGCGCTGGAGGCCATGTCCATGTTCTATGGTGTCC...GGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CTTGGCTCAAGCAGTGAAGTAATAGGAGGAGGAATCTTGTCTGCCAGGACATCCCACCACCAATACCGATaGCCTTCCAGAGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSSSEVIGGGILSARTSHHQYR*PSRVGS
Trigger: ACTGCCCACTCTGGAAGGCCATCGGTATTGGTGGTG...GGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp TTCCCCTGCGACGTGTCCCAGGAAGATGGCTTTGTCTGTAATGATGACATCATAGGATCAGGCGAGAGATaGATGCGGGAGAAGCGATTG +
Preference number: 4 (lower is better)
Translates to: FPCDVSQEDGFVCNDDIIGSGER*MREKRL
Trigger: CAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCC...TATGATGTCATCATTACAGACAAAGCCATCTTCCTGGGACACGTCGCAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp CATGGCGATGATGCCAAAAGAGGCCTTGGAGTTAGAGATGACATCATCCAGGTGTCTGGGATGACATCATaGGAAGGAGGCCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HGDDAKRGLGVRDDIIQVSGMTS*EGGLGS
Trigger: TGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGA...CACCTGGATGATGTCATCTCTAACTCCAAGGCCTCTTTTGGCATCATCGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp ATCTCTTTGTGCCATCTCAGAGCACATAGCATCTGGGCGACATCACAGAAGGGACATAGAACATGGACATaGCCTCCAGCGCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: ISLCHLRAHSIWATSQKGHRTWT*PPALTS
Trigger: TGAGGTCAGCGCTGGAGGCCATGTCCATGTTCTATG...TCCCTTCTGTGATGTCGCCCAGATGCTATGTGCTCTGAGATGGCACAAAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp TCTGGGATGACATCATGGGAAGGAGGCCTTGGCTCAAGCAGTGAAGTAATAGGAAGGTCCCAGAGTGGGTaGTCATCTCTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: SGMTSWEGGLGSSSEVIGRSQSG*SSLVMT
Trigger: TGTCATCACCAGAGATGACCACCCACTCTGGGACCT...TCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp GTGACACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACAGGCACCTTCTCTGGTaGTGGCATCACAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VTPQEGMSWNKASSLLLYRHLLW*WHHRKE
Trigger: CTCCTTCCTGTGATGCCATCACCAGAGAAGGTGCCT...GTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp GTGACACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACAGATGCGAGAGGTTGTaGAAGGACCGAGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTPQEGMSWNKASSLLLYRCERL*KDREQD
Trigger: GTCCTGCTCTCGGTCCTTCCACAACCTCTCGCATCT...GTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CCA 90 bp TTCCCCTGCGACGTGTCCCAGGAAGATGGCTTTGTCTGTAATGATGACATCATACCTTCTACAACATGGTaGCAGCAGTGGAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: FPCDVSQEDGFVCNDDIIPSTTW*QQWRHL
Trigger: GAGATGCCTCCACTGCTGCCACCATGTTGTAGAAGG...TATGATGTCATCATTACAGACAAAGCCATCTTCCTGGGACACGTCGCAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
3UTR CAA 72 bp CTTGGCTCAAGCAGTGAAGTAATAGGAGGAGGAATCTaGTCTGCCAGGACATCCCAGAAGGAGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: LGSSSEVIGGGI*SARTSQKEAFT
Trigger: AGTGAAAGCCTCCTTCTGGGATGTCCTGGCAGACAAGATTCCTCCTCCTATTACTTCACTGCTTGAGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.9
ENST00000416792.2
CDS-3UTR GCA 90 bp CACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACACAGAGGCATCTTCTCTaGTGCAAAGACACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HHRKECHGTRRRLCYYTTQRHLL*CKDTGR
Trigger: TCTCCCTGTGTCTTTGCAGCAGAGAAGATGCCTCTG...TGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR TCA 90 bp GTGACACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCCTGTGATGATGTTGTaGAAAGGGGACCTTATGTCT +
Preference number: 4 (lower is better)
Translates to: VTPQEGMSWNKASSLLLYPVMML*KGDLMS
Trigger: AGACATAAGGTCCCCTTTTCACAACATCATCACAGG...GTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS CCA 90 bp CCCGCGGGCTCGGCGCTCGTGGCGTTGGACGGGCGCGCCCTGGCCTaGCCGGCGCTAGAGGCCAGGAGTACGAGGAGCAGGAGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: PAGSALVALDGRALA*PALEARSTRSRRAG
Trigger: GCCGGCCCTCCTGCTCCTCGTACTCCTGGCCTCTAGCGCCGGCCAGGCCAGGGCGCGCCCGTCCAACGCCACGAGCGCCGAGCCCGCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GCGTCGGACATCCAGGCCGGCTGCGGCGAGCCGTGCAGGGCGTGGTaGTGGTGGGCGTGCAGGCTGGACGGTGGCGGCAGCCCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ASDIQAGCGEPCRAW*WWACRLDGGGSPRS
Trigger: GCTGCGCGGGCTGCCGCCACCGTCCAGCCTGCACGCCCACCACCACCACGCCCTGCACGGCTCGCCGCAGCCGGCCTGGATGTCCGACGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GGCAGCGCGGGGCTGCGCGGGGGCGACAGCAGGTGCTCGCGACTCTaGCGCAGGGCCTCGGGCGAGGACAGCAGCAGGTGCTCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: GSAGLRGGDSRCSRL*RRASGEDSSRCSCD
Trigger: GTCGCAGGAGCACCTGCTGCTGTCCTCGCCCGAGGCCCTGCGCCAGAGTCGCGAGCACCTGCTGTCGCCCCCGCGCAGCCCCGCGCTGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GACATCCAGGCCGGCTGCGGCGAGCCGTGCAGGGCGTGGTGGTGGTaGGCGTGCAGGCTGGACGGTGGCGGCAGCCCGCGCAGCGGTGTT +
Preference number: 5 (lower is better)
Translates to: DIQAGCGEPCRAWWW*ACRLDGGGSPRSGV
Trigger: AACACCGCTGCGCGGGCTGCCGCCACCGTCCAGCCTGCACGCCCACCACCACCACGCCCTGCACGGCTCGCCGCAGCCGGCCTGGATGTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GCTGCGTGGGCCCAAGTTGGCCGCCCCACGCGCGGTGGGCGACGATaGGAGAGTAATGGAAACGCGCCCGGGCACGGCTGGGGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: AAWAQVGRPTRGGRR*ESNGNAPGHGWGRE
Trigger: TTCTCTCCCCCAGCCGTGCCCGGGCGCGTTTCCATTACTCTCCCATCGTCGCCCACCGCGCGTGGGGCGGCCAACTTGGGCCCACGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 90 bp ACAGCAGCAGGTGCTCCTGCGACACCAGGCGCGCGCGCGGCAGCGTaGACTCGTAGCGCGAACGGCCACCATCGCCCAGCAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: TAAGAPATPGARAAA*TRSANGHHRPAGAP
Trigger: AGGAGCACCTGCTGGGCGATGGTGGCCGTTCGCGCTACGAGTTCACGCTGCCGCGCGCGCGCCTGGTGTCGCAGGAGCACCTGCTGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS-3UTR CAA 90 bp CTCCTGTCCAAGGGCCGATCTGGGCCCCAGGCCCCTGGCATGTGTGCGCCTGTGTTGCTGAAGGCCACTTaGGCGCCGACGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: LLSKGRSGPQAPGMCAPVLLKAT*APTPTA
Trigger: GGCCGTGGGCGTCGGCGCCAAAGTGGCCTTCAGCAA...CACAGGCGCACACATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGACAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS CCA 90 bp GGAAGGACCGAGAGCAGGACAGCGTGGAGTAGTGCAAGGAGGGGCTaGGCGGCGGCAAGGCTCGCCAGTCCAGTGTGGCGGCGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GRTESRTAWSSARRG*AAARLASPVWRRGA
Trigger: AGCACCACGCCGCCACACTGGACTGGCGAGCCTTGCCGCCGCCCAGCCCCTCCTTGCACTACTCCACGCTGTCCTGCTCTCGGTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp CTCCTGTCCAAGGGCCGATCTGGGCCCCAGGCCCCTGGCATGTGTGCGCCTGTGGAACGAGAGCAGAGGTaGGAGCGCTGGGCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLSKGRSGPQAPGMCAPVEREQR*ERWAGE
Trigger: CTCTCCCGCCCAGCGCTCCAACCTCTGCTCTCGTTC...CACAGGCGCACACATGCCAGGGGCCTGGGGCCCAGATCGGCCCTTGGACAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS CCA 90 bp GGAAGGACCGAGAGCAGGACAGCGTGGAGTAGTGCAAGGAGGGGCTaGGCGGCGGCAAGGCTCGCCAGTCGAGGTTGGGGGTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: GRTESRTAWSSARRG*AAARLASRGWGSSR
Trigger: CCGTGAAGACCCCCAACCTCGACTGGCGAGCCTTGCCGCCGCCCAGCCCCTCCTTGCACTACTCCACGCTGTCCTGCTCTCGGTCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376325.10
CDS TCA 90 bp AGGGAGCTGCTTCGGGCCCGGTCCGGGCGGGTCCCAGGCCCCGCCTaGTGTCTCAGAATGTCCACCAGAGCTCTGGGCACGTTGATATCC +
Preference number: 5 (lower is better)
Translates to: RELLRARSGRVPGPA*CLRMSTRALGTLIS
Trigger: GGATATCAACGTGCCCAGAGCTCTGGTGGACATTCTGAGACATCAGGCGGGGCCTGGGACCCGCCCGGACCGGGCCCGAAGCAGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GGTGGGCGACGATGGGAGAGTAATGGAAACGCGCCCGGGCACGGCTaGGGGAGAGAAATGAGCATGGGCGGACAGAACCGGGATCAGGCG +
Preference number: 5 (lower is better)
Translates to: GGRRWESNGNAPGHG*GREMSMGGQNRDQA
Trigger: CGCCTGATCCCGGTTCTGTCCGCCCATGCTCATTTCTCTCCCCCAGCCGTGCCCGGGCGCGTTTCCATTACTCTCCCATCGTCGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GGTCGCACTGGGCCGCCAGGCTGCGGGGAGAACGAGAGCAGAGGTTaGAGCGCTGGGCGGGAGAGAAACGGTCAGAGGGTGAGAAACGTA +
Preference number: 5 (lower is better)
Translates to: GRTGPPGCGENESRG*SAGRERNGQRVRNV
Trigger: TACGTTTCTCACCCTCTGACCGTTTCTCTCCCGCCCAGCGCTCCAACCTCTGCTCTCGTTCTCCCCGCAGCCTGGCGGCCCAGTGCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp TGGGCCGCCAGGCTGCGGGGAGAACGAGAGCAGAGGTTGGAGCGCTaGGCGGGAGAGAAACGGTCAGAGGGTGAGAAACGTAGAGATGGG +
Preference number: 5 (lower is better)
Translates to: WAARLRGEREQRLER*AGEKRSEGEKRRDG
Trigger: CCCATCTCTACGTTTCTCACCCTCTGACCGTTTCTCTCCCGCCCAGCGCTCCAACCTCTGCTCTCGTTCTCCCCGCAGCCTGGCGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 90 bp GGGAGAGTAATGGAAACGCGCCCGGGCACGGCTGGGGGAGAGAAATaGGCATGGGCGGACAGAACCGGGATCAGGCGAGAGATGAATGCG +
Preference number: 5 (lower is better)
Translates to: GRVMETRPGTAGGEK*AWADRTGIRREMNA
Trigger: CGCATTCATCTCTCGCCTGATCCCGGTTCTGTCCGCCCATGCTCATTTCTCTCCCCCAGCCGTGCCCGGGCGCGTTTCCATTACTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS-3UTR CAA 90 bp TCTGGGATGACATCATGGGAAGGAGGCCTTGGCTCAAGCAGTGAAGTAATAGGAGGGCCGGCATGGGGCTaGCAGGGGGTCGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: SGMTSWEGGLGSSSEVIGGPAWG*QGVALG
Trigger: GCCCAGTGCGACCCCCTGCAAGCCCCATGCCGGCCC...TCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp AGGCACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCACAGTCACCTCGTTCTaGCTGGCCGTGCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RHGPSDDVIGQGTFSGDGTVTSF*LAVRRC
Trigger: GCACCTGCGCACGGCCAGCAAGAACGAGGTGACTGT...GCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp CACGGTCCCTCTGATGACGTCATAGGGCAAGGCACCTTCTCTGGTGATGGCATCGTGGCGGCGTGGTGCTaGGGGCTGTTGACGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HGPSDDVIGQGTFSGDGIVAAWC*GLLTLR
Trigger: CCTCAACGTCAACAGCCCCAAGCACCACGCCGCCAC...GATGCCATCACCAGAGAAGGTGCCTTGCCCTATGACGTCATCAGAGGGACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS TCA 90 bp GAGAGAAATGAGCATGGGCGGACAGAACCGGGATCAGGCGAGAGATaGATGCGGGAGAAGCGATTGGGAGGGTCGACAGACACCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ERNEHGRTEPGSGER*MREKRLGGSTDTRG
Trigger: CCCTCTGGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCCCGGTTCTGTCCGCCCATGCTCATTTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS GCA 90 bp GAAATGAGCATGGGCGGACAGAACCGGGATCAGGCGAGAGATGAATaGGGGAGAAGCGATTGGGAGGGTCGACAGACACCAGAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: EMSMGGQNRDQARDE*GRSDWEGRQTPEGC
Trigger: ACACCCCTCTGGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCCCGGTTCTGTCCGCCCATGCTCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 90 bp GGACAGAACCGGGATCAGGCGAGAGATGAATGCGGGAGAAGCGATTaGGAGGGTCGACAGACACCAGAGGGGTGTGCAGACATTAGGACG +
Preference number: 5 (lower is better)
Translates to: GQNRDQARDECGRSD*EGRQTPEGCADIRT
Trigger: CGTCCTAATGTCTGCACACCCCTCTGGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCCCGGTTCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS-3UTR CAA 90 bp GTGACACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCTGCGTGGGCCCAAGTaGGCCGCCCCACGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: VTPQEGMSWNKASSLLLYLRGPK*AAPRAV
Trigger: CACCGCGCGTGGGGCGGCCAACTTGGGCCCACGCAG...GTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp CCAGGACATCCCAGAAGGAGGCTTTCACTCCTGTCCAAGGGCCGATCTGGGCCCATAGGAGGAGGAATCTaGTCTGCCAGGACATCCCAG +
Preference number: 5 (lower is better)
Translates to: PGHPRRRLSLLSKGRSGPIGGGI*SARTSQ
Trigger: CTGGGATGTCCTGGCAGACAAGATTCCTCCTCCTAT...GGGCCCAGATCGGCCCTTGGACAGGAGTGAAAGCCTCCTTCTGGGATGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp GGTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGTGCAGATTATCGAGGTaGGGGGTCTTCACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: GPGLWACPAFYNMVAAVECRLSR*GVFTVL
Trigger: CAACACCGTGAAGACCCCCAACCTCGATAATCTGCA...CTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp CTAGTGAGGACACAATCGGTGAGGCATTTTCCCCTGCGACGTGTCCCAGGAAGAGGCAGATGCGAGAGGTaGTGGAAGGACCGAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LVRTQSVRHFPLRRVPGRGRCER*WKDREQ
Trigger: CTGCTCTCGGTCCTTCCACAACCTCTCGCATCTGCC...TCTTCCTGGGACACGTCGCAGGGGAAAATGCCTCACCGATTGTGTCCTCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp GTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGGAGTGGAGGCATCTCTTaGTGCCATCTCAGAGCACAT +
Preference number: 5 (lower is better)
Translates to: VLDSGPALPSTTWWQQWRSGGIS*CHLRAH
Trigger: ATGTGCTCTGAGATGGCACAAAGAGATGCCTCCACT...CCTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp CACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAGGCGCACGGGACGCCTaGCTGAAGGCCACTTTGGCG +
Preference number: 5 (lower is better)
Translates to: HHRKECHGTRRRLCYYTTGARDA*LKATLA
Trigger: CGCCAAAGTGGCCTTCAGCAAGGCGTCCCGTGCGCC...TGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp TTCCCCTGCGACGTGTCCCAGGAAGATGGCTTTGTCTGTAATGATGACATCATAAGAGCTCTGGGCACGTaGATATCCCGGTGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: FPCDVSQEDGFVCNDDIIRALGT*ISRCAR
Trigger: CCGGGCGCACCGGGATATCAACGTGCCCAGAGCTCT...TATGATGTCATCATTACAGACAAAGCCATCTTCCTGGGACACGTCGCAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp GGTCCTGGACTCTGGGCCTGCCCTGCCTTCTACAACATGGTGGCAGCAGTGGAGATGCCAAAAGAGGCCTaGGAGTTAGAGATGACATCA +
Preference number: 5 (lower is better)
Translates to: GPGLWACPAFYNMVAAVEMPKEA*ELEMTS
Trigger: TGATGTCATCTCTAACTCCAAGGCCTCTTTTGGCAT...CTCCACTGCTGCCACCATGTTGTAGAAGGCAGGGCAGGCCCAGAGTCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp TCTGGGATGACATCATGGGAAGGAGGCCTTGGCTCAAGCAGTGAAGTAATAGGAATGCGGGAGAAGCGATaGGGAGGGTCGACAGACACC +
Preference number: 5 (lower is better)
Translates to: SGMTSWEGGLGSSSEVIGMREKR*GGSTDT
Trigger: GGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCAT...TCCTATTACTTCACTGCTTGAGCCAAGGCCTCCTTCCCATGATGTCATCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp CCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACCACAAGGAGCCGGTGCTGCAGTaGAAGGTGGCGTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: PQEGMSWNKASSLLLYHKEPVLQ*KVASYW
Trigger: CCAGTACGACGCCACCTTCAACTGCAGCACCGGCTC...CTTGTGGTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS-3UTR CAA 90 bp GTGACACCACAGGAAGGAATGTCATGGAACAAGGCGTCGTCTCTGTTATTATACGATGCCATCACAGCATaGGGGGTAGGGGTGTCACTG +
Preference number: 5 (lower is better)
Translates to: VTPQEGMSWNKASSLLLYDAITA*GVGVSL
Trigger: CAGTGACACCCCTACCCCCAATGCTGTGATGGCATC...GTATAATAACAGAGACGACGCCTTGTTCCATGACATTCCTTCCTGTGGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416792.2
CDS CCA 72 bp ATCCAGGCCGGCTGCGGCGAGCCGTGCAGGGCGTGGTaGTGGTGGGCGTGCAGGCTGGACGGTGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: IQAGCGEPCRAW*WWACRLDGGGS
Trigger: GCTGCCGCCACCGTCCAGCCTGCACGCCCACCACCACCACGCCCTGCACGGCTCGCCGCAGCCGGCCTGGAT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 72 bp TATCCCGGTGCGCCCGGGGCGCACGGGACGCCTTGCTaGAGGCCACTTTGGCGCCGACGCCCACGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: YPGAPGAHGTPC*RPLWRRRPRPG
Trigger: CCCTGGCCGTGGGCGTCGGCGCCAAAGTGGCCTTCAGCAAGGCGTCCCGTGCGCCCCGGGCGCACCGGGATA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 72 bp AACGGCCACCATCGCCCAGCAGGTGCTCCTGGGACATaGCCCGCCGGGGGTTGGGCGCGGGCGCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: NGHHRPAGAPGT*PAGGWARAPGP
Trigger: TGGGCCTGGCGCCCGCGCCCAACCCCCGGCGGGTCATGTCCCAGGAGCACCTGCTGGGCGATGGTGGCCGTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CAA 72 bp CCAGGAGTACGAGGAGCAGGAGGGCCGGCATGGGGCTaGCAGGGGGTCGCACTGGGCCGCCAGGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: PGVRGAGGPAWG*QGVALGRQAAG
Trigger: CCCCGCAGCCTGGCGGCCCAGTGCGACCCCCTGCAAGCCCCATGCCGGCCCTCCTGCTCCTCGTACTCCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp GAAGGGCGGAGGGAGCTGAGCTGCGTGGGCCCAAGTTaGCCGCCCCACGCGCGGTGGGCGACGATGGGAGAG +
Preference number: 6 (lower is better)
Translates to: EGRRELSCVGPS*PPHARWATMGE
Trigger: CTCTCCCATCGTCGCCCACCGCGCGTGGGGCGGCCAACTTGGGCCCACGCAGCTCAGCTCCCTCCGCCCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CAA 72 bp GGAAGGGCGGAGGGAGCTGAGCTGCGTGGGCCCAAGTaGGCCGCCCCACGCGCGGTGGGCGACGATGGGAGA +
Preference number: 6 (lower is better)
Translates to: GRAEGAELRGPK*AAPRAVGDDGR
Trigger: TCTCCCATCGTCGCCCACCGCGCGTGGGGCGGCCAACTTGGGCCCACGCAGCTCAGCTCCCTCCGCCCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CAA 90 bp CTGGGCACGTTGATATCCCGGTGCGCCCGGGGCGCACGGGACGCCTaGCTGAAGGCCACTTTGGCGCCGACGCCCACGGCCAGGGCGAAG +
Preference number: 6 (lower is better)
Translates to: LGTLISRCARGARDA*LKATLAPTPTARAK
Trigger: CTTCGCCCTGGCCGTGGGCGTCGGCGCCAAAGTGGCCTTCAGCAAGGCGTCCCGTGCGCCCCGGGCGCACCGGGATATCAACGTGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 72 bp GGTGCTCCTGCGACACCAGGCGCGCGCGCGGCAGCGTaGACTCGTAGCGCGAACGGCCACCATCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: GAPATPGARAAA*TRSANGHHRPA
Trigger: TGCTGGGCGATGGTGGCCGTTCGCGCTACGAGTTCACGCTGCCGCGCGCGCGCCTGGTGTCGCAGGAGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp GCCCAAGTTGGCCGCCCCACGCGCGGTGGGCGACGATaGGAGAGTAATGGAAACGCGCCCGGGCACGGCTGG +
Preference number: 6 (lower is better)
Translates to: AQVGRPTRGGRR*ESNGNAPGHGW
Trigger: CCAGCCGTGCCCGGGCGCGTTTCCATTACTCTCCCATCGTCGCCCACCGCGCGTGGGGCGGCCAACTTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CAA 90 bp CAGGAGGCAGGAAGGGCGGAGGGAGCTGAGCTGCGTGGGCCCAAGTaGGCCGCCCCACGCGCGGTGGGCGACGATGGGAGAGTAATGGAA +
Preference number: 6 (lower is better)
Translates to: QEAGRAEGAELRGPK*AAPRAVGDDGRVME
Trigger: TTCCATTACTCTCCCATCGTCGCCCACCGCGCGTGGGGCGGCCAACTTGGGCCCACGCAGCTCAGCTCCCTCCGCCCTTCCTGCCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp GGGCCGCCAGGCTGCGGGGAGAACGAGAGCAGAGGTTaGAGCGCTGGGCGGGAGAGAAACGGTCAGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GPPGCGENESRG*SAGRERNGQRV
Trigger: CACCCTCTGACCGTTTCTCTCCCGCCCAGCGCTCCAACCTCTGCTCTCGTTCTCCCCGCAGCCTGGCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS GCA 72 bp ATGTCCACCAGAGCTCTGGGCACGTTGATATCCCGGTaGGCCCGGGGCGCACGGGACGCCTTGCTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: MSTRALGTLISR*ARGARDALLKA
Trigger: GGCCTTCAGCAAGGCGTCCCGTGCGCCCCGGGCGCACCGGGATATCAACGTGCCCAGAGCTCTGGTGGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp GGGTCTTCACGGTGTTGTAGAGGTTCTTGGGCGTCCTaGGGGGCATGCTGTCGGGACCGCCGATCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: GSSRCCRGSWAS*GACCRDRRSPG
Trigger: CCCCGGGGATCGGCGGTCCCGACAGCATGCCCCCCAGGACGCCCAAGAACCTCTACAACACCGTGAAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CAA 90 bp GGGTCGCACTGGGCCGCCAGGCTGCGGGGAGAACGAGAGCAGAGGTaGGAGCGCTGGGCGGGAGAGAAACGGTCAGAGGGTGAGAAACGT +
Preference number: 6 (lower is better)
Translates to: GSHWAARLRGEREQR*ERWAGEKRSEGEKR
Trigger: ACGTTTCTCACCCTCTGACCGTTTCTCTCCCGCCCAGCGCTCCAACCTCTGCTCTCGTTCTCCCCGCAGCCTGGCGGCCCAGTGCGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 72 bp ATGGAAACGCGCCCGGGCACGGCTGGGGGAGAGAAATaGGCATGGGCGGACAGAACCGGGATCAGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: METRPGTAGGEK*AWADRTGIRRE
Trigger: CTCTCGCCTGATCCCGGTTCTGTCCGCCCATGCTCATTTCTCTCCCCCAGCCGTGCCCGGGCGCGTTTCCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp CGATGGGAGAGTAATGGAAACGCGCCCGGGCACGGCTaGGGGAGAGAAATGAGCATGGGCGGACAGAACCGG +
Preference number: 6 (lower is better)
Translates to: RWESNGNAPGHG*GREMSMGGQNR
Trigger: CCGGTTCTGTCCGCCCATGCTCATTTCTCTCCCCCAGCCGTGCCCGGGCGCGTTTCCATTACTCTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp AGGCTGCGGGGAGAACGAGAGCAGAGGTTGGAGCGCTaGGCGGGAGAGAAACGGTCAGAGGGTGAGAAACGT +
Preference number: 6 (lower is better)
Translates to: RLRGEREQRLER*AGEKRSEGEKR
Trigger: ACGTTTCTCACCCTCTGACCGTTTCTCTCCCGCCCAGCGCTCCAACCTCTGCTCTCGTTCTCCCCGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS TCA 72 bp GAGCATGGGCGGACAGAACCGGGATCAGGCGAGAGATaGATGCGGGAGAAGCGATTGGGAGGGTCGACAGAC +
Preference number: 6 (lower is better)
Translates to: EHGRTEPGSGER*MREKRLGGSTD
Trigger: GTCTGTCGACCCTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCCCGGTTCTGTCCGCCCATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS CCA 72 bp CGGGATCAGGCGAGAGATGAATGCGGGAGAAGCGATTaGGAGGGTCGACAGACACCAGAGGGGTGTGCAGAC +
Preference number: 6 (lower is better)
Translates to: RDQARDECGRSD*EGRQTPEGCAD
Trigger: GTCTGCACACCCCTCTGGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2
CDS GCA 72 bp ATGGGCGGACAGAACCGGGATCAGGCGAGAGATGAATaGGGGAGAAGCGATTGGGAGGGTCGACAGACACCA +
Preference number: 6 (lower is better)
Translates to: MGGQNRDQARDE*GRSDWEGRQTP
Trigger: TGGTGTCTGTCGACCCTCCCAATCGCTTCTCCCGCATTCATCTCTCGCCTGATCCCGGTTCTGTCCGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376325.10
ENST00000416792.2