RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHISA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000188803

Ensembl transcript IDs: ENST00000343478.7, ENST00000409168.7, ENST00000432116.7, ENST00000441885.8

Found 1228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCAGGATGCGAATGTTGAGCCCGAGACCCCGCACATCACAGTaGCCCTCCCCACCCTGGCTCTCTGGCCACCGCAGGTGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: PCRMRMLSPRPRTSQ*PSPPWLSGHRRCLL
Trigger: CAGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGGGAGGGCCACTGTGATGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp AGGGAAGGAGCACAGCCCGCTGAAAGGACAGGCCCAGGGTCCTTATaGGCGGGCAGTCAGCTGGAAGGGGGTGGAGTTCCCACCAATGGG +
Preference number: 1 (lower is better)
Translates to: REGAQPAERTGPGSL*AGSQLEGGGVPTNG
Trigger: CCCATTGGTGGGAACTCCACCCCCTTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCCTGTCCTTTCAGCGGGCTGTGCTCCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp GTGGCAGTCATGGTCAGGTCTAGAGGCCTGGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGCCAGCACCCCATTGCTACTCCCCTC +
Preference number: 1 (lower is better)
Translates to: VAVMVRSRGLEGVRR*SGVWEGQHPIATPL
Trigger: GAGGGGAGTAGCAATGGGGTGCTGGCCCTCCCAGACACCCGATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCATGACTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp CCGCTGAAAGGACAGGCCCAGGGTCCTTATGGGCGGGCAGTCAGCTaGAAGGGGGTGGAGTTCCCACCAATGGGGAGGCAGCTGAAGGAA +
Preference number: 1 (lower is better)
Translates to: PLKGQAQGPYGRAVS*KGVEFPPMGRQLKE
Trigger: TTCCTTCAGCTGCCTCCCCATTGGTGGGAACTCCACCCCCTTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCCTGTCCTTTCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp TGGAGAAGGCAGCCTGAGTGGCAGTCATGGTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGATCGGGTGTCTGGGAGGGCCAGCACC +
Preference number: 1 (lower is better)
Translates to: WRRQPEWQSWSGLEA*RECGDDRVSGRAST
Trigger: GGTGCTGGCCCTCCCAGACACCCGATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCATGACTGCCACTCAGGCTGCCTTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp AGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCTaGGTCCCCCGGATGGGGAGAAGGAGGCGCGGGACGGAAAGGGAG +
Preference number: 1 (lower is better)
Translates to: RPQSSKGLSADRTCS*VPRMGRRRRGTERE
Trigger: CTCCCTTTCCGTCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp CCACCCCAGGCTCTAGTGAGGAGTGCGGTGGCTGTCCAGGACATCTaGGGACATCGCTGTGGGGCAGGCATTGTGGGATGTGTGCAGCTC +
Preference number: 1 (lower is better)
Translates to: PPQALVRSAVAVQDI*GHRCGAGIVGCVQL
Trigger: GAGCTGCACACATCCCACAATGCCTGCCCCACAGCGATGTCCTCAGATGTCCTGGACAGCCACCGCACTCCTCACTAGAGCCTGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 90 bp CAGCCTGAGTGGCAGTCATGGTCAGGTCTAGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCTGGGAGGGCCAGCACCCCATTGCTA +
Preference number: 1 (lower is better)
Translates to: QPEWQSWSGLEAWRE*GDDRVSGRASTPLL
Trigger: TAGCAATGGGGTGCTGGCCCTCCCAGACACCCGATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCATGACTGCCACTCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GTGGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATaGGTGGAGTGGGATGGGTGTCTCTTGGAAGTCTATCGCCCTCTA +
Preference number: 1 (lower is better)
Translates to: VVPSHKEPPASVSPP*VEWDGCLLEVYRPL
Trigger: TAGAGGGCGATAGACTTCCAAGAGACACCCATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 90 bp ATGGTCTACCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTaGGGACCTGCCCAGTTAGCCCCTAGGCCAGTCGCCTGGAGGACC +
Preference number: 1 (lower is better)
Translates to: MVYQVPQCLHKGMML*GPAQLAPRPVAWRT
Trigger: GGTCCTCCAGGCGACTGGCCTAGGGGCTAACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTAGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCCTGTaGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCAT +
Preference number: 1 (lower is better)
Translates to: ANAATSTGSFPPHSL*SLPTRSRRHLCPRH
Trigger: ATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCACAGGGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 90 bp AGTGAGGAGTGCGGTGGCTGTCCAGGACATCTGAGGACATCGCTGTaGGGCAGGCATTGTGGGATGTGTGCAGCTCAGTGGAGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: SEECGGCPGHLRTSL*GRHCGMCAAQWRWG
Trigger: TCCCCACCTCCACTGAGCTGCACACATCCCACAATGCCTGCCCCACAGCGATGTCCTCAGATGTCCTGGACAGCCACCGCACTCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp AAACCCAGGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTaGCAGAACCTGCAGCTGAGTCCCCCGGATGGGGAGAAGGAGGCG +
Preference number: 1 (lower is better)
Translates to: KPRQLQTTVKQGSLC*QNLQLSPPDGEKEA
Trigger: CGCCTCCTTCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCCTGGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp CAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGATaGGTGTCTCTTGGAAGTCTATCGCCCTCTAAAGTCACACCTGTG +
Preference number: 1 (lower is better)
Translates to: QGAAGICVPAMGGVG*VSLGSLSPSKVTPV
Trigger: CACAGGTGTGACTTTAGAGGGCGATAGACTTCCAAGAGACACCCATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 90 bp TCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTaGGATGGGTGTCTCTTGGAAGTCTATCGCCCTCTAAAGTCACAC +
Preference number: 1 (lower is better)
Translates to: SHKEPPASVSPPWVE*DGCLLEVYRPLKSH
Trigger: GTGTGACTTTAGAGGGCGATAGACTTCCAAGAGACACCCATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 90 bp ATGAGACCGAGTAGCCTATCCGGTCAGCCCACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCAGCTTCAGACCACAGTCAAGCAAGG +
Preference number: 1 (lower is better)
Translates to: MRPSSLSGQPTDWTR*PLQTQAASDHSQAR
Trigger: CCTTGCTTGACTGTGGTCTGAAGCTGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGATAGGCTACTCGGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp CTCAGGTCCTTTCCCCTCACCACCAGCATCCTGCCTTCCAAGGGATaGCCACAGATTAGACGATTCAAAGGTGCTGGGCTCAGGGGCCCA +
Preference number: 1 (lower is better)
Translates to: LRSFPLTTSILPSKG*PQIRRFKGAGLRGP
Trigger: TGGGCCCCTGAGCCCAGCACCTTTGAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAGGATGCTGGTGGTGAGGGGAAAGGACCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGGGTAGTCCCTaGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGG +
Preference number: 1 (lower is better)
Translates to: EGLCVCWEESREGSP*PSSRTTPGMHPQCG
Trigger: CCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGACTACCCTCTCTGCTTTCCTCCCAACAGACACATAAACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 90 bp GGCATTCTCAGCCACTCAGGTCCTTTCCCCTCACCACCAGCATCCTaGCTTCCAAGGGATGGCCACAGATTAGACGATTCAAAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: GILSHSGPFPSPPAS*LPRDGHRLDDSKVL
Trigger: CAGCACCTTTGAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAGGATGCTGGTGGTGAGGGGAAAGGACCTGAGTGGCTGAGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GCCAGGGTTGGGCCCTCAGGGGTCAGCAAAGGAAGGGTCACTCAGTaGGGACCAGAGAGTTCCAGCAGGCAAGAAAAGAATCATTATTGT +
Preference number: 1 (lower is better)
Translates to: ARVGPSGVSKGRVTQ*GPESSSRQEKNHYC
Trigger: ACAATAATGATTCTTTTCTTGCCTGCTGGAACTCTCTGGTCCCCACTGAGTGACCCTTCCTTTGCTGACCCCTGAGGGCCCAACCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp ATGCCAGCTCTTCTCAGGGCAGGCACCTTCTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACCTTGGGTCAAGTGCACAGTTGCCTG +
Preference number: 1 (lower is better)
Translates to: MPALLRAGTFWSPSD*QPFHFTLGQVHSCL
Trigger: CAGGCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCCTGAGAAGAGCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp GATGGGTGTCTCTTGGAAGTCTATCGCCCTCTAAAGTCACACCTGTaGCCTCCAGTAACTCCTGTCAGAAGCCACGCATGTCACCAGGAC +
Preference number: 1 (lower is better)
Translates to: DGCLLEVYRPLKSHL*PPVTPVRSHACHQD
Trigger: GTCCTGGTGACATGCGTGGCTTCTGACAGGAGTTACTGGAGGTCACAGGTGTGACTTTAGAGGGCGATAGACTTCCAAGAGACACCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR TCA 90 bp CCAAGACACTGGGGGAGCCCTGAGGGCAGAAGCCTGGTTAGGAGGTaGAGTAATTCTTGGCAAAGCCTTTTTGACACAGGAAGGCATGGA +
Preference number: 1 (lower is better)
Translates to: PRHWGSPEGRSLVRR*SNSWQSLFDTGRHG
Trigger: TCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAAGAATTACTTCACCTCCTAACCAGGCTTCTGCCCTCAGGGCTCCCCCAGTGTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp TTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTCTCTaGAATTGGAACCGCCTCCCTCCAGCTATAAGGACCGTATCCAAA +
Preference number: 1 (lower is better)
Translates to: LWANLQTFLSSQLPL*NWNRLPPAIRTVSK
Trigger: TTTGGATACGGTCCTTATAGCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp TCCATTCTTGCTTCACAAGCCTTCACCGGGAGGACGGTAGTGTCATaGCGAAGGGCTACAAAGGTACTAGGATGGGATGAGTGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: SILASQAFTGRTVVS*RRATKVLGWDECPF
Trigger: GAAGGGGCACTCATCCCATCCTAGTACCTTTGTAGCCCTTCGTCATGACACTACCGTCCTCCCGGTGAAGGCTTGTGAAGCAAGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 90 bp CCCAGATTCGGACAGGATGACAGGAAATGTATGTGGGAGGTAACATaGCAGCTCTTCTCAGGGCAGGCACCTTCTGGAGTCCGAGTGATT +
Preference number: 1 (lower is better)
Translates to: PRFGQDDRKCMWEVT*QLFSGQAPSGVRVI
Trigger: AATCACTCGGACTCCAGAAGGTGCCTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACATACATTTCCTGTCATCCTGTCCGAATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GGATCTGAAGGATCAGCTAGGAGGAATAAAGTTGCAGGGAGGATGTaGGGGAAGGGGACACAGGCAGTAGGAGTGATCTCTGAACTGAGC +
Preference number: 1 (lower is better)
Translates to: GSEGSARRNKVAGRM*GKGTQAVGVISELS
Trigger: GCTCAGTTCAGAGATCACTCCTACTGCCTGTGTCCCCTTCCCCCACATCCTCCCTGCAACTTTATTCCTCCTAGCTGATCCTTCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp ATGGGATCAGCTTTCTGGTTTGGTGTATACCTGCATGTAGACACCTaGGAAGGGCATTCTCAGCCACTCAGGTCCTTTCCCCTCACCACC +
Preference number: 1 (lower is better)
Translates to: MGSAFWFGVYLHVDT*EGHSQPLRSFPLTT
Trigger: GGTGGTGAGGGGAAAGGACCTGAGTGGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAGGTATACACCAAACCAGAAAGCTGATCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp TATGTGGGAGGTAACATGCCAGCTCTTCTCAGGGCAGGCACCTTCTaGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGTCAA +
Preference number: 1 (lower is better)
Translates to: YVGGNMPALLRAGTF*SPSDWQPFHFTLGQ
Trigger: TTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp AAAAGTGTCACCCTGGGGGCTGGAGAACTTGGTGCTGAGAAGCTTTaGCACTGGAGATGGGATCAGCTTTCTGGTTTGGTGTATACCTGC +
Preference number: 1 (lower is better)
Translates to: KSVTLGAGELGAEKL*HWRWDQLSGLVYTC
Trigger: GCAGGTATACACCAAACCAGAAAGCTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCACCAAGTTCTCCAGCCCCCAGGGTGACACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp GTGTCTTTACAAGAGGGCTTCCATGGCACACAGTTGGTGACCTATTaGATGGTTAGGCCCTTAAACTTCAGGTACGAGGGCATCCCTGGG +
Preference number: 1 (lower is better)
Translates to: VSLQEGFHGTQLVTY*MVRPLNFRYEGIPG
Trigger: CCCAGGGATGCCCTCGTACCTGAAGTTTAAGGGCCTAACCATTCAATAGGTCACCAACTGTGTGCCATGGAAGCCCTCTTGTAAAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 90 bp AAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTaGAGAGGGGAGAAGGAGATGAGAGCTTTGGAACTCTTGAAATCA +
Preference number: 1 (lower is better)
Translates to: KIQGDGFLFLLGGTP*RGEKEMRALELLKS
Trigger: TGATTTCAAGAGTTCCAAAGCTCTCATCTCCTTCTCCCCTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 90 bp GGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGTCAAGTaGACAGTTGCCTGTGGAAGGAATATGAAGTTGGAGGCTGGTGAC +
Preference number: 1 (lower is better)
Translates to: GVRVIGSPFILPWVK*TVACGRNMKLEAGD
Trigger: GTCACCAGCCTCCAACTTCATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GTGCTGAGAAGCTTTGACACTGGAGATGGGATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGACACCTGGGAAGGGCATTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: VLRSFDTGDGISFLV*CIPACRHLGRAFSA
Trigger: GGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAGGTATACACCAAACCAGAAAGCTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp ATGGAGGAAGGTGAATGGAGGAAGGTAGATGGAGGAAGAGGGAGATaGGAGGAAGGAATGAGTGACCTGGCCTGGAAATCTGAGGTTTTC +
Preference number: 1 (lower is better)
Translates to: MEEGEWRKVDGGRGR*EEGMSDLAWKSEVF
Trigger: GAAAACCTCAGATTTCCAGGCCAGGTCACTCATTCCTTCCTCTCATCTCCCTCTTCCTCCATCTACCTTCCTCCATTCACCTTCCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTaGGTCAAGTGCACAGTTGCCTGTGGAAGGAATATGAAGTTGGAG +
Preference number: 1 (lower is better)
Translates to: APSGVRVIGSPFILP*VKCTVACGRNMKLE
Trigger: CTCCAACTTCATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp AGAGCAAAATTTCCCAGATTCGGACAGGATGACAGGAAATGTATGTaGGAGGTAACATGCCAGCTCTTCTCAGGGCAGGCACCTTCTGGA +
Preference number: 1 (lower is better)
Translates to: RAKFPRFGQDDRKCM*EVTCQLFSGQAPSG
Trigger: TCCAGAAGGTGCCTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACATACATTTCCTGTCATCCTGTCCGAATCTGGGAAATTTTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp ATGCTCACAACACTCGTAGGACCTTGTTTAAACAAAAGACAGAATTaGGGAGGAGTCCATGCCCCCTGCACAGATGCTCTGCAAGCTGTC +
Preference number: 1 (lower is better)
Translates to: MLTTLVGPCLNKRQN*GGVHAPCTDALQAV
Trigger: GACAGCTTGCAGAGCATCTGTGCAGGGGGCATGGACTCCTCCTCAATTCTGTCTTTTGTTTAAACAAGGTCCTACGAGTGTTGTGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 90 bp GAGAGCAGGTGCTGGCAGGGAATGAAAGCCCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCATCTAGTCAAAGCCCCTCATTTTAC +
Preference number: 1 (lower is better)
Translates to: ESRCWQGMKALQCKS*MKLQSSSSQSPSFY
Trigger: GTAAAATGAGGGGCTTTGACTAGATGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAGGGCTTTCATTCCCTGCCAGCACCTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GAGCCTCAGTGTCCAGACTTGGTCTTCAGGACACATATTCCAGAGTaGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACG +
Preference number: 1 (lower is better)
Translates to: EPQCPDLVFRTHIPE*VIMTFIATQQPVNT
Trigger: CGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACCAAGTCTGGACACTGAGGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp CCTGGAGGACCTTTGTTTGCTTTTGCTAATAGGTCTTTGTCCCTTTaGTCCAGAGGAGGCACGGATCTGAAGGATCAGCTAGGAGGAATA +
Preference number: 1 (lower is better)
Translates to: PGGPLFAFANRSLSL*SRGGTDLKDQLGGI
Trigger: TATTCCTCCTAGCTGATCCTTCAGATCCGTGCCTCCTCTGGATCAAAGGGACAAAGACCTATTAGCAAAAGCAAACAAAGGTCCTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp ATGGCATCTAGGTTCCAGCCCCAGAAGCCTCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGGCTTTGCTTGTTCCATGAAGATGGA +
Preference number: 1 (lower is better)
Translates to: MASRFQPQKPLLSAT*TCLLMWLCLFHEDG
Trigger: TCCATCTTCATGGAACAAGCAAAGCCACATCAATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTCTGGGGCTGGAACCTAGATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTaGCACACAACAGCCTGTGAACACGTTCCTCTGCAGCTTGAAATG +
Preference number: 1 (lower is better)
Translates to: GLQDTYSRVGYHDIH*HTTACEHVPLQLEM
Trigger: CATTTCAAGCTGCAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp ATCTGCTACGTGAACTTGCCTATTGATGTGGCTTTGCTTGTTCCATaGAGATGGATGGGACAGCTGAATAAATGGGATACCTCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: ICYVNLPIDVALLVP*RWMGQLNKWDTSLS
Trigger: GGACAGAGAGGTATCCCATTTATTCAGCTGTCCCATCCATCTTCATGGAACAAGCAAAGCCACATCAATAGGCAAGTTCACGTAGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 90 bp TCATTTTACCTTGGGTCAAGTGCACAGTTGCCTGTGGAAGGAATATaGAGTTGGAGGCTGGTGACAGACAAGGTATCTCTGAAGAAAATG +
Preference number: 1 (lower is better)
Translates to: SFYLGSSAQLPVEGI*SWRLVTDKVSLKKM
Trigger: CATTTTCTTCAGAGATACCTTGTCTGTCACCAGCCTCCAACTTCATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp AAACTCCAAACTCAGAATTCCCCAGAATTCCACAGTCACTTAGGATaGTTTAGGTGTGTCTTTACAAGAGGGCTTCCATGGCACACAGTT +
Preference number: 1 (lower is better)
Translates to: KLQTQNSPEFHSHLG*FRCVFTRGLPWHTV
Trigger: AACTGTGTGCCATGGAAGCCCTCTTGTAAAGACACACCTAAACCATCCTAAGTGACTGTGGAATTCTGGGGAATTCTGAGTTTGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 90 bp GAACTCTTGAAATCAGTGAAAGGACACAGTCCATTGCTTTCTCTGTaGTTTGTGGACTTGGTTAGATTAAAAATCTCCAGGGCTGACACC +
Preference number: 1 (lower is better)
Translates to: ELLKSVKGHSPLLSL*FVDLVRLKISRADT
Trigger: GGTGTCAGCCCTGGAGATTTTTAATCTAACCAAGTCCACAAACCACAGAGAAAGCAATGGACTGTGTCCTTTCACTGATTTCAAGAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGACCGCAGGTGCCTCCTaGGAGCAGAGCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSATAGAS*EQSRGG
Trigger: TCCACCCCTGCTCTGCTCCCAGGAGGCACCTGCGGT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CGGAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACATCACAGTGGCCCTCCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: RRCMWEQVEPCRMRM*SPRPRTSQWPSPPW
Trigger: CCAGGGTGGGGAGGGCCACTGTGATGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAGGAGCACAGCCCGCTaGAAGGACAGGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLRSTAR*KDRPRV
Trigger: GACCCTGGGCCTGTCCTTTCAGCGGGCTGTGCTCCT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTCTGGCCACCGCAGGTaGCTCCTGGGAGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLSGHRR*LLGAEQ
Trigger: CTGCTCTGCTCCCAGGAGGCACCTGCGGTGGCCAGA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGAGGCCGTCACACCATaGCAACCCCCAGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLEAVTP*QPPGWR
Trigger: CCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCCCCACCAGGCTCTCTaGTCTTGGGGGAGCGGATGC +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLPHQAL*SWGSGC
Trigger: GCATCCGCTCCCCCAAGACCAGAGAGCCTGGTGGGG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGAAGGTGGTCGGGGGTaGGAATGGGGCCTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEEGGRG*EWGLAP
Trigger: GGGGGCTAGGCCCCATTCTCACCCCCGACCACCTTC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGA +
Preference number: 2 (lower is better)
Translates to: EVHVGTGGALQDANVEPEAESPG*GEGGAG
Trigger: TCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGA +
Preference number: 2 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVAESPG*GEGGAG
Trigger: TCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSATDWTR*PLQTQA
Trigger: TGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGAGGTGGGCGGGCAGTaGCGGTCCCCCAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEEVGGQ*RSPNRA
Trigger: AGCTCTGTTGGGGGACCGCCACTGCCCGCCCACCTC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGGCTAACATCAGGCTaGGTTGGGAGCTTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGLTSG*VGSFRG
Trigger: TCCCCTGAAGCTCCCAACCCAGCCTGATGTTAGCCC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGGGAGCGGATGCTGCTaGATTCACTGTCACCTCCCC +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLGSGCC*IHCHLP
Trigger: GGGGAGGTGACAGTGAATTCAGCAGCATCCGCTCCC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTCTGGCCACCGCAGGTaGCTCCTGGGAGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQESGHRR*LLGAEQ
Trigger: CTGCTCTGCTCCCAGGAGGCACCTGCGGTGGCCAGA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTACCAGGTACCCCAGTaGCTGCACAAAGGGATGATG +
Preference number: 2 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRYQVPQ*LHKGMM
Trigger: CATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAAGCCCTTGGCTCCGTaGACTGGGGTATCAACTCAC +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAKPLAP*TGVSTH
Trigger: GTGAGTTGATACCCCAGTGCACGGAGCCAAGGGCTT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGGGGGTATGGCTTTTTaGGCAAAGGTGGCCCACCCC +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLGGMAF*AKVAHP
Trigger: GGGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGGTCTTTGTCCCTTTaGTCCAGAGGAGGCACGGAT +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARSLSL*SRGGTD
Trigger: ATCCGTGCCTCCTCTGGATCAAAGGGACAAAGACCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLTDWTR*PLQTQA
Trigger: TGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGGCCCAGGGTCCTTATaGGCGGGCAGTCAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVGPGSL*AGSQLE
Trigger: TTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGCCTAGGCCAGTCGCCTaGAGGACCTTTGTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAPRPVA*RTFVCF
Trigger: AAAGCAAACAAAGGTCCTCCAGGCGACTGGCCTAGG...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGACAAAGCCAGGGCTaGAAGCTGTGTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARQSQG*KLCLQS
Trigger: GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCTCCTCACTCCCCACTaGTTCTTCTGGAGGAGCAAG +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLLLTPH*FFWRSK
Trigger: CTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGGAG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGTGGAGAAGGCAGCCTaGGTGGCAGTCATGGTCAGG +
Preference number: 2 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVVEKAA*VAVMVR
Trigger: CCTGACCATGACTGCCACTCAGGCTGCCTTCTCCAC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAGGCGGGGAAGAGGCTaGGGTGGGCGGGCAGTGGCG +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRRRGRG*GGRAVA
Trigger: CGCCACTGCCCGCCCACCTCAGCCTCTTCCCCGCCT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGCTGTCCAGGACATCTaGGGACATCGCTGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEAVQDI*GHRCGA
Trigger: TGCCCCACAGCGATGTCCTCAGATGTCCTGGACAGC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEGQPTD*TRWPLQ
Trigger: TTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTCATTATTGTGCTTATaGACACAGCAGCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRSLLCL*TQQLPG
Trigger: GCCAGGGAGCTGCTGTGTCCATAAGCACAATAATGA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAAAGGGATGATGCTGTaGGGACCTGCCCAGTTAGCC +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLKGMML*GPAQLA
Trigger: GGCTAACTGGGCAGGTCCCCACAGCATCATCCCTTT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAAGGATAGGAGTCTTTaGCCAGAGCAGGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAKDRSL*PEQELL
Trigger: CAGAAGCTCCTGCTCTGGCCAAAGACTCCTATCCTT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGATCCGGTCAGCCCACTaGTTGGACCCGCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWIRSAH*LDPLAP
Trigger: AGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGAT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGATTTTCCAACCCAACTaGCATCAGAGCCTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAIFQPN*HQSLSA
Trigger: GGCTGAAAGGCTCTGATGTCAGTTGGGTTGGAAAAT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTTCTGGCCACCGCAGGTaGCTCCTGGGAGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSGHRR*LLGAEQ
Trigger: CTGCTCTGCTCCCAGGAGGCACCTGCGGTGGCCAGA...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVTDWTR*PLQTQA
Trigger: TGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGT...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGGAAGGGTCACTCAGTaGGGACCAGAGAGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: EVHVGTGGALQDANVEPEGRVTQ*GPESSS
Trigger: GCTGGAACTCTCTGGTCCCCACTGAGTGACCCTTCC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTACCGCAGGTGCCTCCTaGGAGCAGAGCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPTAGAS*EQSRGG
Trigger: TCCACCCCTGCTCTGCTCCCAGGAGGCACCTGCGGT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGAGGTGGGCGGGCAGTaGCGGTCCCCCAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGEVGGQ*RSPNRA
Trigger: AGCTCTGTTGGGGGACCGCCACTGCCCGCCCACCTC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCCCCACCAGGCTCTCTaGTCTTGGGGGAGCGGATGC +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPPHQAL*SWGSGC
Trigger: GCATCCGCTCCCCCAAGACCAGAGAGCCTGGTGGGG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGACAGAACCTGCAGCTaGGTCCCCCGGATGGGGAGA +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPDRTCS*VPRMGR
Trigger: TCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCAGGAGCACAGCCCGCTaGAAGGACAGGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPARSTAR*KDRPRV
Trigger: GACCCTGGGCCTGTCCTTTCAGCGGGCTGTGCTCCT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGTCCCCCAACAGAGCTaGGGACCATGGTCTACCAGG +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSVPQQS*GPWSTR
Trigger: CCTGGTAGACCATGGTCCTCAGCTCTGTTGGGGGAC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGGAGCGGATGCTGCTaGATTCACTGTCACCTCCCC +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGSGCC*IHCHLP
Trigger: GGGGAGGTGACAGTGAATTCAGCAGCATCCGCTCCC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCCAATAGCCTGGAGTTaGTTCCCCCAGCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSPIAWS*FPQPQP
Trigger: GGGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGATTGCTACTCCCCTCTaGGAAGGCTACAGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLIATPL*EGYSQN
Trigger: GTTTTGGCTGTAGCCTTCGCAGAGGGGAGTAGCAAT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGGGCCAGCACCCCATTaGTACTCCCCTCTGCGAAGG +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWGPAPH*YSPLRR
Trigger: CCTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGAACAGGTGGAGCCCTaGAGGATGCGAATGTTGAGC +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEEQVEP*RMRMLS
Trigger: GCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGA +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRAESPG*GEGGAG
Trigger: TCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGGAAAAGTGTCACCCTaGGGGCTGGAGAACTTGGTG +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEGKVSP*GLENLV
Trigger: CACCAAGTTCTCCAGCCCCCAGGGTGACACTTTTCC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CCCCCTCCTCACTCCCCACTGATTCTTCTGGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGG +
Preference number: 2 (lower is better)
Translates to: PPPHSPLILLEEQER*LLVLGLSVLDQAIG
Trigger: CCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CCCATGGTGTGGCATTCAGGGGTCACTGCAGGGTGGGCAGCAAAGTaGAGCAGGGTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAA +
Preference number: 2 (lower is better)
Translates to: PMVWHSGVTAGWAAK*SRVFSSLRRESIKE
Trigger: TTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACCCCTGAATGCCACACCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCGGAAAGGGAGTTGGTaGAGGTGGTCGGGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRKGSW*RWSGVR
Trigger: TCTCACCCCCGACCACCTTCACCAACTCCCTTTCCG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGACAGAACCTGCAGCTaGGTCCCCCGGATGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPADRTCS*VPRMGR
Trigger: TCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAATCCGGTCAGCCCACTaGTTGGACCCGCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRIRSAH*LDPLAP
Trigger: AGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGAT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTA +
Preference number: 2 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLAVLDE*MRPSSL
Trigger: TAGGCTACTCGGTCTCATTCATTCATCTAGAACCGC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGCAGAAAACTCAAGGGTaGAATCCTCAGGGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEQKTQG*NPQGQG
Trigger: TCCCTGGCCCTGAGGATTTCACCCTTGAGTTTTCTG...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQREGVRR*SGVWEG
Trigger: GCCCTCCCAGACACCCGATCATCTCCGCACTCCCTC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGGGAGCGGATGCTGCTaGATTCACTGTCACCTCCCC +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSGSGCC*IHCHLP
Trigger: GGGGAGGTGACAGTGAATTCAGCAGCATCCGCTCCC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCCAATAGCCTGGAGTTaGTTCCCCCAGCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSPIAWS*FPQPQP
Trigger: GGGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWEAWRE*GDDRVS
Trigger: AGACACCCGATCATCTCCGCACTCCCTCCAGGCCTC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGCACGACTCCAGGAATaGATCCCCAGTGTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSARLQE*IPSVGS
Trigger: AGACCCCACACTGGGGATGCATTCCTGGAGTCGTGC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGGGGGTATGGCTTTTTaGGCAAAGGTGGCCCACCCC +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWGGMAF*AKVAHP
Trigger: GGGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGGGGGTATGGCTTTTTaGGCAAAGGTGGCCCACCCC +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPGGMAF*AKVAHP
Trigger: GGGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTCAGCTGGAAGGGGGTaGAGTTCCCACCAATGGGGA +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSSAGRG*SSHQWG
Trigger: TCCCCATTGGTGGGAACTCCACCCCCTTCCAGCTGA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGAGAAGGCAGCCTGAGTaGCAGTCATGGTCAGGTCTA +
Preference number: 2 (lower is better)
Translates to: EVHVGTGGALQDANVEPERRQPE*QSWSGL
Trigger: TAGACCTGACCATGACTGCCACTCAGGCTGCCTTCT...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAACCGCAGGTGCCTCCTaGGAGCAGAGCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRTAGAS*EQSRGG
Trigger: TCCACCCCTGCTCTGCTCCCAGGAGGCACCTGCGGT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCCCACCCTGGCTCTCTaGCCACCGCAGGTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGPTLAL*PPQVPP
Trigger: AGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCCACCCTGGCTCTCTaGCCACCGCAGGTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGPTLAL*PPQVPP
Trigger: AGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGG...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CCTCACTCCCCACTGATTCTTCTGGAGGAGCAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PHSPLILLEEQERLL*VLGLSVLDQAIGAV
Trigger: CACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp AGCCTCCATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTaGGGAGGCACACCCTGCAGAGGGGAGAAGGAGATGAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: SLHPPKIQGDGFLFL*GGTPCRGEKEMRAL
Trigger: CAAAGCTCTCATCTCCTTCTCCCCTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGATGGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCGGAAAGGGAGTTGGTaGAGGTGGTCGGGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGRKGSW*RWSGVR
Trigger: TCTCACCCCCGACCACCTTCACCAACTCCCTTTCCG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLEGVRR*SGVWEG
Trigger: GCCCTCCCAGACACCCGATCATCTCCGCACTCCCTC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCCCCAGTGTGGGGTCTaGCAGTGGCTTTCACAACCC +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGPQCGV*QWLSQP
Trigger: GGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGACTATCACAGGCCATaGCATCTCAAACCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEDYHRP*HLKPRA
Trigger: AGCTCTGGGTTTGAGATGTCATGGCCTGTGATAGTC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTGGACTCTCCATTCTTaGTTCACAAGCCTTCACCGG +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEWTLHS*FTSLHR
Trigger: CCGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCCTTTTTGGGCAAAGGTaGCCCACCCCCACTTCCTAC +
Preference number: 2 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSLFGQR*PTPTSY
Trigger: GTAGGAAGTGGGGGTGGGCCACCTTTGCCCAAAAAG...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGGAAGGGTCACTCAGTaGGGACCAGAGAGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWGRVTQ*GPESSS
Trigger: GCTGGAACTCTCTGGTCCCCACTGAGTGACCCTTCC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGTCAGCTGGAAGGGGGTaGAGTTCCCACCAATGGGGA +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWSAGRG*SSHQWG
Trigger: TCCCCATTGGTGGGAACTCCACCCCCTTCCAGCTGA...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCCCACCCTGGCTCTCTaGCCACCGCAGGTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCPTLAL*PPQVPP
Trigger: AGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGAGGTGGGCGGGCAGTaGCGGTCCCCCAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: SAELRAGKTPFIRALLLDEVGGQ*RSPNRA
Trigger: AGCTCTGTTGGGGGACCGCCACTGCCCGCCCACCTC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCTCCTCACTCCCCACTaGTTCTTCTGGAGGAGCAAG +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPLLTPH*FFWRSK
Trigger: CTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGGAG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGACAGAACCTGCAGCTaGGTCCCCCGGATGGGGAGA +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIDRTCS*VPRMGR
Trigger: TCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTATCCGGTCAGCCCACTaGTTGGACCCGCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCIRSAH*LDPLAP
Trigger: AGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGAT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLEGVRR*SGVWEG
Trigger: GCCCTCCCAGACACCCGATCATCTCCGCACTCCCTC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGTGCTGAGAAGCTTTaGCACTGGAGATGGGATCAG +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGAEKL*HWRWDQ
Trigger: CTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCACC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGTGTTGGAGCAGTGGCTaGGAGCCCTCAAGGATAGGA +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWCWSSG*EPSRIG
Trigger: TCCTATCCTTGAGGGCTCTCAGCCACTGCTCCAACA...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGAACAGGTGGAGCCCTaGAGGATGCGAATGTTGAGC +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSEQVEP*RMRMLS
Trigger: GCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTTGGGGGCTGAAAAGCTaGTCTCTAGAAACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVWGLKS*SLETSV
Trigger: GACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCA...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGAGGCCGTCACACCATaGCAACCCCCAGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMEAVTP*QPPGWR
Trigger: CCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCTTTTTGGGCAAAGGTaGCCCACCCCCACTTCCTAC +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPLFGQR*PTPTSY
Trigger: GTAGGAAGTGGGGGTGGGCCACCTTTGCCCAAAAAG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGAT +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSGLEA*RECGDD
Trigger: ATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGA...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGAT +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSSGLEA*RECGDD
Trigger: ATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGCATGTGGGAACAGGTaGAGCCCTGCAGGATGCGAA +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGACGNR*SPAGCE
Trigger: TTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCCTAGGCCAGTCGCCTaGAGGACCTTTGTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSPRPVA*RTFVCF
Trigger: AAAGCAAACAAAGGTCCTCCAGGCGACTGGCCTAGG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAAAGGGATGATGCTGTaGGGACCTGCCCAGTTAGCC +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPKGMML*GPAQLA
Trigger: GGCTAACTGGGCAGGTCCCCACAGCATCATCCCTTT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGGAAAAGTGTCACCCTaGGGGCTGGAGAACTTGGTG +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSGKVSP*GLENLV
Trigger: CACCAAGTTCTCCAGCCCCCAGGGTGACACTTTTCC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACC +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEWSPSD*QPFHFT
Trigger: GGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGTACGAGGGCATCCCTaGGTGGCCGAGCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLVRGHP*VAEPIR
Trigger: CCTGATGGGCTCGGCCACCCAGGGATGCCCTCGTAC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp GGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTCTCTGAAATaGGAACCGCCTCCCTCCAGCTATAAGGACCGTATCCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: GQPPDLSLQPAPSLK*EPPPSSYKDRIQME
Trigger: TTCCATTTGGATACGGTCCTTATAGCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCAGAAAACTCAAGGGTaGAATCCTCAGGGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPQKTQG*NPQGQG
Trigger: TCCCTGGCCCTGAGGATTTCACCCTTGAGTTTTCTG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGTGGAGAAGGCAGCCTaGGTGGCAGTCATGGTCAGG +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIVEKAA*VAVMVR
Trigger: CCTGACCATGACTGCCACTCAGGCTGCCTTCTCCAC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCCCAGTGTGGGGTCTaGCAGTGGCTTTCACAACCC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPQCGV*QWLSQP
Trigger: GGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGGTGCTGAGAAGCTTTaGCACTGGAGATGGGATCAG +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWGAEKL*HWRWDQ
Trigger: CTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCACC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCTTCTGGAGTCCGAGTaGTTGGCAGCCCTTTCATTT +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSLLESE*LAALSF
Trigger: AAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp ATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCCTGTGGTCCGTCACCAGGACAAGCTaGCATGGAACCACCCCACTT +
Preference number: 2 (lower is better)
Translates to: IANAATSTGSFPPHSLWSVTRTS*HGTTPL
Trigger: AAGTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGAC...GGACCACAGGGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR GCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGGCCAGCACCCCATTaGTACTCCCCTCTGCGAAGG +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGPAPH*YSPLRR
Trigger: CCTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGGCCAGCACCCCATTaGTACTCCCCTCTGCGAAGG +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGPAPH*YSPLRR
Trigger: CCTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGEAWRE*GDDRVS
Trigger: AGACACCCGATCATCTCCGCACTCCCTCCAGGCCTC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLEAWRE*GDDRVS
Trigger: AGACACCCGATCATCTCCGCACTCCCTCCAGGCCTC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLGQPTD*TRWPLQ
Trigger: TTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGAAGGCAGCCTGAGTaGCAGTCATGGTCAGGTCTA +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRRQPE*QSWSGL
Trigger: TAGACCTGACCATGACTGCCACTCAGGCTGCCTTCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCCTAGGCCAGTCGCCTaGAGGACCTTTGTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSPRPVA*RTFVCF
Trigger: AAAGCAAACAAAGGTCCTCCAGGCGACTGGCCTAGG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCAATGCATCCCCAGTGTaGGGTCTGACAGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSNASPV*GLTVAF
Trigger: GAAAGCCACTGTCAGACCCCACACTGGGGATGCATT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGCTCAGGGGCCCAGCTaGGAGCCACCTGCTCTATTC +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLAQGPS*EPPALF
Trigger: GAATAGAGCAGGTGGCTCCCAGCTGGGCCCCTGAGC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGCTCAGGGGCCCAGCTaGGAGCCACCTGCTCTATTC +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCAQGPS*EPPALF
Trigger: GAATAGAGCAGGTGGCTCCCAGCTGGGCCCCTGAGC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTACGATTCAAAGGTGCTaGGCTCAGGGGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNITIQRC*AQGPSW
Trigger: CCAGCTGGGCCCCTGAGCCCAGCACCTTTGAATCGT...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTGCATGTAGACACCTaGGAAGGGCATTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLHVDT*EGHSQP
Trigger: TGGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCAGTGTGTTGGAGCAGTaGCTGAGAGCCCTCAAGGAT +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSSVLEQ*LRALKD
Trigger: ATCCTTGAGGGCTCTCAGCCACTGCTCCAACACACT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGCAGGGATGTTGGCATaGATATTCCTCCATGCTTGG +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSAGMLA*IFLHAW
Trigger: CCAAGCATGGAGGAATATCCATGCCAACATCCCTGC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCGGAAAGGGAGTTGGTaGAGGTGGTCGGGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMRKGSW*RWSGVR
Trigger: TCTCACCCCCGACCACCTTCACCAACTCCCTTTCCG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGCTTTGCTTGTTCCATaGAGATGGATGGGACAGCTG +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWALLVP*RWMGQL
Trigger: CAGCTGTCCCATCCATCTTCATGGAACAAGCAAAGC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAGGGGAGGAGAAATTTaGATTGGGGGCAAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRGGEI*IGGKVG
Trigger: TCCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGATGAGAGGAAGGAATaGGTGACCTGGCCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSDERKE*VTWPGN
Trigger: ATTTCCAGGCCAGGTCACTCATTCCTTCCTCTCATC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTGGCAGGAACCAAACTaGCTATCACAGGCCATGACA +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSWQEPN*LSQAMT
Trigger: TGTCATGGCCTGTGATAGTCAGTTTGGTTCCTGCCA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCCTGTGGAAGGAATATaGAGTTGGAGGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWPVEGI*SWRLVT
Trigger: TGTCACCAGCCTCCAACTTCATATTCCTTCCACAGG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACTTCTGTCTAGGTCCTaGCGGAGGTGCATGTGGGAA +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRLLSRS*RRCMWE
Trigger: TTCCCACATGCACCTCCGGCAGGACCTAGACAGAAG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGCACGACTCCAGGAATaGATCCCCAGTGTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGARLQE*IPSVGS
Trigger: AGACCCCACACTGGGGATGCATTCCTGGAGTCGTGC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCACCGGCACCACCACACTCCCTGTaGTCCCTTCCCACAAGGAGC +
Preference number: 2 (lower is better)
Translates to: IIAKRRTHTLQMLLHPPAPPHSL*SLPTRS
Trigger: GCTCCTTGTGGGAAGGGACCACAGGGAGTGTGGTGG...TGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGQPTD*TRWPLQ
Trigger: TTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGGAAGGGTCACTCAGTaGGGACCAGAGAGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLGRVTQ*GPESSS
Trigger: GCTGGAACTCTCTGGTCCCCACTGAGTGACCCTTCC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCTGAGTGGCAGTCATaGTCAGGTCTAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPEWQS*SGLEAW
Trigger: CCAGGCCTCTAGACCTGACCATGACTGCCACTCAGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCTCATCCTCCTTGTCTaGGGGCTGAAAAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGLILLV*GLKSCS
Trigger: AGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATGAG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCACTCTTATAAACCCCTaGGGACCAGCCCTTAAGAAG +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSTLINP*GPALKK
Trigger: CTTCTTAAGGGCTGGTCCCCAGGGGTTTATAAGAGT...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGACGATTCAAAGGTGCTaGGCTCAGGGGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLTIQRC*AQGPSW
Trigger: CCAGCTGGGCCCCTGAGCCCAGCACCTTTGAATCGT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGATGGGATCAGCTTTCTaGTTTGGTGTATACCTGCAT +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEMGSAF*FGVYLH
Trigger: ATGCAGGTATACACCAAACCAGAAAGCTGATCCCAT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGACAGCTGAATAAATaGGATACCTCTCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGQLNK*DTSLSQ
Trigger: CTGGGACAGAGAGGTATCCCATTTATTCAGCTGTCC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGCAGGGATGTTGGCATaGATATTCCTCCATGCTTGG +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWAGMLA*IFLHAW
Trigger: CCAAGCATGGAGGAATATCCATGCCAACATCCCTGC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGATGTGTGCAGCTCAGTaGAGGTGGGGAGGAACGGGG +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLMCAAQ*RWGGTG
Trigger: CCCCGTTCCTCCCCACCTCCACTGAGCTGCACACAT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGTACGAGGGCATCCCTaGGTGGCCGAGCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTVRGHP*VAEPIR
Trigger: CCTGATGGGCTCGGCCACCCAGGGATGCCCTCGTAC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCACAAGAGGGCTTCCATaGCACACAGTTGGTGACCTA +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSTRGLP*HTVGDL
Trigger: TAGGTCACCAACTGTGTGCCATGGAAGCCCTCTTGT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGCCTGCACAAAGGGATaGTGCTGTGGGGACCTGCCC +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTACTKG*CCGDLP
Trigger: GGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTGGGGGCTGAAAAGCTaGTCTCTAGAAACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSWGLKS*SLETSV
Trigger: GACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGATGAGCGGAGAGGATaGAGGACAACCACCTCTCAT +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRDERRG*RTTTSH
Trigger: ATGAGAGGTGGTTGTCCTGCATCCTCTCCGCTCATC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGCATTGTGGGATGTGTaGAGCTCAGTGGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLALWDV*SSVEVG
Trigger: CCCCACCTCCACTGAGCTGCACACATCCCACAATGC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AAGCCACGCATGTCACCAGGACAAGCTGCCATGGAACCACCCCACTTATTCCTGTCTTCTCATTTCAGATaGCGTTCCCTAGGCAACCTC +
Preference number: 2 (lower is better)
Translates to: KPRMSPGQAAMEPPHLFLSSHFR*RSLGNL
Trigger: GAGGTTGCCTAGGGAACGCCATCTGAAATGAGAAGA...CAGGAATAAGTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGACATGCGTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CCA 90 bp AACACACACATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCTCCCAGACAAGCCTCTaGCCTCCACACCATCTTCTC +
Preference number: 2 (lower is better)
Translates to: NTHIANAATSTGSFPPHSSQTSL*PPHHLL
Trigger: GAGAAGATGGTGTGGAGGCCAGAGGCTTGTCTGGGA...GGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTCAGCTGGAAGGGGGTaGAGTTCCCACCAATGGGGA +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCSAGRG*SSHQWG
Trigger: TCCCCATTGGTGGGAACTCCACCCCCTTCCAGCTGA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGGCCCAGGGTCCTTATaGGCGGGCAGTCAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTGPGSL*AGSQLE
Trigger: TTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGCATGTGGGAACAGGTaGAGCCCTGCAGGATGCGAA +
Preference number: 2 (lower is better)
Translates to: SAELRAGKTPFIRALLLDACGNR*SPAGCE
Trigger: TTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGTTTCCTGTTCCTGTTaGGAGGCACACCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIVSCSC*EAHPAE
Trigger: CTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAAC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGGTTTATGTGTCTGTTaGGAGGAAAGCAGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWGLCVC*EESREG
Trigger: ACCCTCTCTGCTTTCCTCCCAACAGACACATAAACC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCTGCCTTCCAAGGGATaGCCACAGATTAGACGATTC +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGLPSKG*PQIRRF
Trigger: GAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGACTTGCCTATTGATGTaGCTTTGCTTGTTCCATGAA +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQETCLLM*LCLFHE
Trigger: TTCATGGAACAAGCAAAGCCACATCAATAGGCAAGT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGCCACCAGCCTGGTTaGGCTAGAAATCATGGCATC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGHQPG*ARNHGI
Trigger: GATGCCATGATTTCTAGCCCAACCAGGCTGGTGGCC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCAGGAGAGGGAAATCTTaGGCTTTAGGCTTCCTTTGT +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSRRGKS*ALGFLC
Trigger: ACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCT...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAGGAGAAATTTGAATTaGGGGCAAGGTTGGAACTTT +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQERRNLN*GQGWNF
Trigger: AAAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGTGCACAGTTGCCTGTaGAAGGAATATGAAGTTGGA +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSVHSCL*KEYEVG
Trigger: TCCAACTTCATATTCCTTCCACAGGCAACTGTGCAC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAGGACCGTATCCAAATaGAAACTCCAAACTCAGAAT +
Preference number: 2 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQERTVSK*KLQTQN
Trigger: ATTCTGAGTTTGGAGTTTCCATTTGGATACGGTCCT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCAGAAAACTCAAGGGTaGAATCCTCAGGGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLQKTQG*NPQGQG
Trigger: TCCCTGGCCCTGAGGATTTCACCCTTGAGTTTTCTG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAGTAGGAGTGATCTCTaGACTGAGCAGGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGSRSDL*TEQVDR
Trigger: TCTGTCTACCTGCTCAGTTCAGAGATCACTCCTACT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGTCCCCCAACAGAGCTaGGGACCATGGTCTACCAGG +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTVPQQS*GPWSTR
Trigger: CCTGGTAGACCATGGTCCTCAGCTCTGTTGGGGGAC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCACTGCTGTTGGATCTaGCTGTTTTTAGGATCACAC +
Preference number: 2 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPHCCWI*LFLGSH
Trigger: GTGTGATCCTAAAAACAGTCAGATCCAACAGCAGTG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACCCCAGTGTGGGGTCTaGCAGTGGCTTTCACAACCC +
Preference number: 2 (lower is better)
Translates to: LPSFLASRPKGEAEEILEPQCGV*QWLSQP
Trigger: GGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGTGGTAAGGCTGGGATaGGAAATGTCTTGGAATCAA +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSVVRLG*EMSWNQ
Trigger: TTGATTCCAAGACATTTCTCATCCCAGCCTTACCAC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGAACAGGTGGAGCCCTaGAGGATGCGAATGTTGAGC +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMEQVEP*RMRMLS
Trigger: GCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGAT +
Preference number: 2 (lower is better)
Translates to: SAELRAGKTPFIRALLLDSGLEA*RECGDD
Trigger: ATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGA...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTAGAAGGCAGCCTGAGTaGCAGTCATGGTCAGGTCTA +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIRRQPE*QSWSGL
Trigger: TAGACCTGACCATGACTGCCACTCAGGCTGCCTTCT...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCTCATCCTCCTTGTCTaGGGGCTGAAAAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGLILLV*GLKSCS
Trigger: AGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATGAG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGCCACCAGCCTGGTTaGGCTAGAAATCATGGCATC +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGHQPG*ARNHGI
Trigger: GATGCCATGATTTCTAGCCCAACCAGGCTGGTGGCC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGTGTGTTGGAGCAGTaGCTGAGAGCCCTCAAGGAT +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLSVLEQ*LRALKD
Trigger: ATCCTTGAGGGCTCTCAGCCACTGCTCCAACACACT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CTGTTGGGAGGCACACCCTGCAGAGGGGAGAAGGAGATGAGAGCTTaGGAACTCTTGAAATCAGTGAAAGGACACAGTCCATTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LLGGTPCRGEKEMRA*ELLKSVKGHSPLLS
Trigger: AGAAAGCAATGGACTGTGTCCTTTCACTGATTTCAAGAGTTCCAAAGCTCTCATCTCCTTCTCCCCTCTGCAGGGTGTGCCTCCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp GGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTaGGGTCAAGTGCACAGTTGCCTGTGGAAGGAATATGAAGTTGGA +
Preference number: 2 (lower is better)
Translates to: GTFWSPSDWQPFHFT*GQVHSCLWKEYEVG
Trigger: TCCAACTTCATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTA +
Preference number: 2 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRAVLDE*MRPSSL
Trigger: TAGGCTACTCGGTCTCATTCATTCATCTAGAACCGC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCTCATCAACAACCCCTaGGAGAGACAGAAACCCTGT +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLINNP*ERQKPC
Trigger: ACAGGGTTTCTGTCTCTCTCAGGGGTTGTTGATGAG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGG +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWLLSAT*TCLLMW
Trigger: CCACATCAATAGGCAAGTTCACGTAGCAGATAAAAG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGGGGAGGAGAAATTTaGATTGGGGGCAAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRGGEI*IGGKVG
Trigger: TCCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGACTATCACAGGCCATaGCATCTCAAACCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIDYHRP*HLKPRA
Trigger: AGCTCTGGGTTTGAGATGTCATGGCCTGTGATAGTC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTTCTGGAGTCCGAGTaGTTGGCAGCCCTTTCATTT +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNILLESE*LAALSF
Trigger: AAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGATGAGCGGAGAGGATaGAGGACAACCACCTCTCAT +
Preference number: 2 (lower is better)
Translates to: SAELRAGKTPFIRALLLDDERRG*RTTTSH
Trigger: ATGAGAGGTGGTTGTCCTGCATCCTCTCCGCTCATC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCAGCTGGGAGCCACCTaGTCTATTCAGACTCACTTC +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLQLGAT*SIQTHF
Trigger: GAAGTGAGTCTGAATAGAGCAGGTGGCTCCCAGCTG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGATGTGGGAGGTAACATaGCAGCTCTTCTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLMWEVT*QLFSGQ
Trigger: CTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACAT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACCTGAGTGGCAGTCATaGTCAGGTCTAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTPEWQS*SGLEAW
Trigger: CCAGGCCTCTAGACCTGACCATGACTGCCACTCAGG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCTCATCCTCCTTGTCTaGGGGCTGAAAAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SAELRAGKTPFIRALLLDLILLV*GLKSCS
Trigger: AGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATGAG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACTTGGCTCCGTGCACTaGGGTATCAACTCACAGGGG +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTLGSVH*GINSQG
Trigger: CCCCTGTGAGTTGATACCCCAGTGCACGGAGCCAAG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAAGGATAGGAGTCTTTaGCCAGAGCAGGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLKDRSL*PEQELL
Trigger: CAGAAGCTCCTGCTCTGGCCAAAGACTCCTATCCTT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLQCKS*MKLQSS
Trigger: TGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGGGGAGAGCAGGTGCTaGCAGGGAATGAAAGCCCTA +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTGESRC*QGMKAL
Trigger: TAGGGCTTTCATTCCCTGCCAGCACCTGCTCTCCCC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGTGGGGCAGGCATTGTaGGATGTGTGCAGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTVGQAL*DVCSSV
Trigger: CACTGAGCTGCACACATCCCACAATGCCTGCCCCAC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp GGCACACCCTGCAGAGGGGAGAAGGAGATGAGAGCTTTGGAACTCTaGAAATCAGTGAAAGGACACAGTCCATTGCTTTCTCTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GTPCRGEKEMRALEL*KSVKGHSPLLSLWF
Trigger: AAACCACAGAGAAAGCAATGGACTGTGTCCTTTCACTGATTTCAAGAGTTCCAAAGCTCTCATCTCCTTCTCCCCTCTGCAGGGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp ATTGAGTTTGATGGCAGGGATGTTGGCATGGATATTCCTCCATGCTaGGAGACTCAGGAGGCCCTCAAGTCTTTGTGGACAAAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: IEFDGRDVGMDIPPC*ETQEALKSLWTKED
Trigger: ATCCTCCTTTGTCCACAAAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACATCCCTGCCATCAAACTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTA +
Preference number: 2 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGAVLDE*MRPSSL
Trigger: TAGGCTACTCGGTCTCATTCATTCATCTAGAACCGC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCTCATCAACAACCCCTaGGAGAGACAGAAACCCTGT +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLLINNP*ERQKPC
Trigger: ACAGGGTTTCTGTCTCTCTCAGGGGTTGTTGATGAG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGATGGATGGGACAGCTaGATAAATGGGATACCTCTC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIDGWDS*INGIPL
Trigger: GAGAGGTATCCCATTTATTCAGCTGTCCCATCCATC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCGTGAACTTGCCTATTaGTGTGGCTTTGCTTGTTCC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIRELAY*CGFACS
Trigger: GGAACAAGCAAAGCCACATCAATAGGCAAGTTCACG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCAGATTCGGACAGGATaGCAGGAAATGTATGTGGGA +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIQIRTG*QEMYVG
Trigger: TCCCACATACATTTCCTGTCATCCTGTCCGAATCTG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCAAAGAATCATTATTGTaGTTATGGACACAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSKESLL*LWTQQL
Trigger: GAGCTGCTGTGTCCATAAGCACAATAATGATTCTTT...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCACCGGCAATGGGTGGAGTGGGATaGGTGTCTCTTGGAAGTCTA +
Preference number: 2 (lower is better)
Translates to: IIAKRRTHTLQMLLHPPAMGGVG*VSLGSL
Trigger: TAGACTTCCAAGAGACACCCATCCCACTCCACCCAT...TGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACTTTTTGGGCAAAGGTaGCCCACCCCCACTTCCTAC +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTLFGQR*PTPTSY
Trigger: GTAGGAAGTGGGGGTGGGCCACCTTTGCCCAAAAAG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTCATTATTGTGCTTATaGACACAGCAGCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGSLLCL*TQQLPG
Trigger: GCCAGGGAGCTGCTGTGTCCATAAGCACAATAATGA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTCATTATTGTGCTTATaGACACAGCAGCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLSLLCL*TQQLPG
Trigger: GCCAGGGAGCTGCTGTGTCCATAAGCACAATAATGA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTACTCTTATAAACCCCTaGGGACCAGCCCTTAAGAAG +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLTLINP*GPALKK
Trigger: CTTCTTAAGGGCTGGTCCCCAGGGGTTTATAAGAGT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGA +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWISFLV*CIPACR
Trigger: TCTACATGCAGGTATACACCAAACCAGAAAGCTGAT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCTGAGGGCAGAAGCCTaGTTAGGAGGTGAAGTAATT +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLRAEA*LGGEVI
Trigger: AATTACTTCACCTCCTAACCAGGCTTCTGCCCTCAG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAGGAGAAATTTGAATTaGGGGCAAGGTTGGAACTTT +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRRNLN*GQGWNF
Trigger: AAAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAAATCTGAGGTTTTCTaGAAATCAGGAGTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWKSEVF*KSGVSG
Trigger: CCCAGAAACTCCTGATTTCCAGAAAACCTCAGATTT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIWSPSD*QPFHFT
Trigger: GGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTACAAAGGTACTAGGATaGGATGAGTGCCCCTTCCTA +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNITKVLG*DECPFL
Trigger: TAGGAAGGGGCACTCATCCCATCCTAGTACCTTTGT...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp AATGCTCACAACACTCGTAGGACCTTGTTTAAACAAAAGACAGAATaGAGGAGGAGTCCATGCCCCCTGCACAGATGCTCTGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: NAHNTRRTLFKQKTE*RRSPCPLHRCSASC
Trigger: ACAGCTTGCAGAGCATCTGTGCAGGGGGCATGGACTCCTCCTCAATTCTGTCTTTTGTTTAAACAAGGTCCTACGAGTGTTGTGAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCACTGCTGTTGGATCTaGCTGTTTTTAGGATCACAC +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLHCCWI*LFLGSH
Trigger: GTGTGATCCTAAAAACAGTCAGATCCAACAGCAGTG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGATGGATGGGACAGCTaGATAAATGGGATACCTCTC +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMDGWDS*INGIPL
Trigger: GAGAGGTATCCCATTTATTCAGCTGTCCCATCCATC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCGTGAACTTGCCTATTaGTGTGGCTTTGCTTGTTCC +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCRELAY*CGFACS
Trigger: GGAACAAGCAAAGCCACATCAATAGGCAAGTTCACG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATTGGGGGCTGAAAAGCTaGTCTCTAGAAACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SAELRAGKTPFIRALLLDWGLKS*SLETSV
Trigger: GACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCA...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATACCAGGTACCCCAGTaGCTGCACAAAGGGATGATG +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTYQVPQ*LHKGMM
Trigger: CATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAAGGACACAGTCCATTaGTTTCTCTGTGGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLKDTVH*FLCGLW
Trigger: CCACAAACCACAGAGAAAGCAATGGACTGTGTCCTT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGAAGCCTCTTTTATCTaGTACGTGAACTTGCCTATT +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGEASFI*YVNLPI
Trigger: AATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GACAGGGATACACTACCCCTACAACAGAATTCACATTTGATCTATAACAGCACACCGCCATGGGTGGAGTaGGATGGGTGTCTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: DRDTLPLQQNSHLIYNSTPPWVE*DGCLLE
Trigger: TTCCAAGAGACACCCATCCCACTCCACCCATGGCGG...TGTGCTGTTATAGATCAAATGTGAATTCTGTTGTAGGGGTAGTGTATCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGACAGCTGAATAAATaGGATACCTCTCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGQLNK*DTSLSQ
Trigger: CTGGGACAGAGAGGTATCCCATTTATTCAGCTGTCC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACC +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLWSPSD*QPFHFT
Trigger: GGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTCAGTGTCCAGACTTaGTCTTCAGGACACATATTC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNILSVQT*SSGHIF
Trigger: GAATATGTGTCCTGAAGACCAAGTCTGGACACTGAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAGCAGAAGAAATCCTTaGAAAGAAGTAAGCATTGCA +
Preference number: 2 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGSRRNP*KEVSIA
Trigger: TGCAATGCTTACTTCTTTTCAAGGATTTCTTCTGCT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGG +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLLSAT*TCLLMW
Trigger: CCACATCAATAGGCAAGTTCACGTAGCAGATAAAAG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATTGGCAAAGCCTTTTTaGCACAGGAAGGCATGGAGC +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTLAKPF*HRKAWS
Trigger: GCTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTAAGGACACAGTCCATTaGTTTCTCTGTGGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCKDTVH*FLCGLW
Trigger: CCACAAACCACAGAGAAAGCAATGGACTGTGTCCTT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAAGGACACAGTCCATTaGTTTCTCTGTGGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLKDTVH*FLCGLW
Trigger: CCACAAACCACAGAGAAAGCAATGGACTGTGTCCTT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCCATTGCTTTCTCTGTaGTTTGTGGACTTGGTTAGA +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGPLLSL*FVDLVR
Trigger: TCTAACCAAGTCCACAAACCACAGAGAAAGCAATGG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACTGCCTTCCAAGGGATaGCCACAGATTAGACGATTC +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTLPSKG*PQIRRF
Trigger: GAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAGGAGAGGGAAATCTTaGGCTTTAGGCTTCCTTTGT +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLRRGKS*ALGFLC
Trigger: ACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp AAGTTGGAGGCTGGTGACAGACAAGGTATCTCTGAAGAAAATGGATaGAGTTTGATGGCAGGGATGTTGGCATGGATATTCCTCCATGCT +
Preference number: 2 (lower is better)
Translates to: KLEAGDRQGISEENG*SLMAGMLAWIFLHA
Trigger: AGCATGGAGGAATATCCATGCCAACATCCCTGCCATCAAACTCAATCCATTTTCTTCAGAGATACCTTGTCTGTCACCAGCCTCCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp TTACCTTGGGTCAAGTGCACAGTTGCCTGTGGAAGGAATATGAAGTaGGAGGCTGGTGACAGACAAGGTATCTCTGAAGAAAATGGATTG +
Preference number: 2 (lower is better)
Translates to: LPWVKCTVACGRNMK*EAGDRQGISEENGL
Trigger: CAATCCATTTTCTTCAGAGATACCTTGTCTGTCACCAGCCTCCAACTTCATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAGTAGGAGTGATCTCTaGACTGAGCAGGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: LPSFLASRPKGEAEEILESRSDL*TEQVDR
Trigger: TCTGTCTACCTGCTCAGTTCAGAGATCACTCCTACT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGAAGCCTCTTTTATCTaGTACGTGAACTTGCCTATT +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGEASFI*YVNLPI
Trigger: AATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGGTTTATGTGTCTGTTaGGAGGAAAGCAGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LPSFLASRPKGEAEEILEGLCVC*EESREG
Trigger: ACCCTCTCTGCTTTCCTCCCAACAGACACATAAACC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTATGGGATCAGCTTTCTaGTTTGGTGTATACCTGCAT +
Preference number: 2 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCMGSAF*FGVYLH
Trigger: ATGCAGGTATACACCAAACCAGAAAGCTGATCCCAT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACTGAGGGCAGAAGCCTaGTTAGGAGGTGAAGTAATT +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTLRAEA*LGGEVI
Trigger: AATTACTTCACCTCCTAACCAGGCTTCTGCCCTCAG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLLQCKS*MKLQSS
Trigger: TGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAGCAGAAGAAATCCTTaGAAAGAAGTAAGCATTGCA +
Preference number: 2 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGSRRNP*KEVSIA
Trigger: TGCAATGCTTACTTCTTTTCAAGGATTTCTTCTGCT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGCAGAAGAAATCCTTaGAAAGAAGTAAGCATTGCA +
Preference number: 2 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLSRRNP*KEVSIA
Trigger: TGCAATGCTTACTTCTTTTCAAGGATTTCTTCTGCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTAAAGAATCATTATTGTaGTTATGGACACAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VFSSLRRESIKETHSHNIKESLL*LWTQQL
Trigger: GAGCTGCTGTGTCCATAAGCACAATAATGATTCTTT...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGTGCACAGTTGCCTGTaGAAGGAATATGAAGTTGGA +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTVHSCL*KEYEVG
Trigger: TCCAACTTCATATTCCTTCCACAGGCAACTGTGCAC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp TTAATGTGTTTGCTGATTTACAAGATGGGTTTGAATATCACAAACTaGGACTCTCCATTCTTGCTTCACAAGCCTTCACCGGGAGGACGG +
Preference number: 2 (lower is better)
Translates to: LMCLLIYKMGLNITN*DSPFLLHKPSPGGR
Trigger: CCGTCCTCCCGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCAAGTTTGTGATATTCAAACCCATCTTGTAAATCAGCAAACACATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR TCA 90 bp GACAGGGATACACTACCCCTACAACAGAATTCACATTTGATCTATAACAGCACAACACACTTAGGATGCTaGAACTCTCCACATGCACAC +
Preference number: 2 (lower is better)
Translates to: DRDTLPLQQNSHLIYNSTTHLGC*NSPHAH
Trigger: GTGTGCATGTGGAGAGTTTCAGCATCCTAAGTGTGT...TGTGCTGTTATAGATCAAATGTGAATTCTGTTGTAGGGGTAGTGTATCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR TCA 90 bp GACAGGGATACACTACCCCTACAACAGAATTCACATTTGATCTATAACAGCACAGGATCCAGTGACTCTTaGTGTGACAGAATGCTCACA +
Preference number: 2 (lower is better)
Translates to: DRDTLPLQQNSHLIYNSTGSSDS*CDRMLT
Trigger: TGTGAGCATTCTGTCACATCAAGAGTCACTGGATCC...TGTGCTGTTATAGATCAAATGTGAATTCTGTTGTAGGGGTAGTGTATCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAGAGATGTGCAAAAATaGATAAAACAAGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLRDVQK*IKQGEG
Trigger: TCCCTCTCCTTGTTTTATTCATTTTTGCACATCTCT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAAAGAATCATTATTGTaGTTATGGACACAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLKESLL*LWTQQL
Trigger: GAGCTGCTGTGTCCATAAGCACAATAATGATTCTTT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp TTAGCTTTCATCTTGAGGCTTGAAGGTCTGCATAACCTTCTACCTTaGTGTCCACATCATAGAGTGTTTATGGAGACACACTTAGGATGC +
Preference number: 2 (lower is better)
Translates to: LAFILRLEGLHNLLP*CPHHRVFMETHLGC
Trigger: GCATCCTAAGTGTGTCTCCATAAACACTCTATGATGTGGACACAAAGGTAGAAGGTTATGCAGACCTTCAAGCCTCAAGATGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CAA 90 bp TCAGTGAAAGGACACAGTCCATTGCTTTCTCTGTGGTTTGTGGACTaGGTTAGATTAAAAATCTCCAGGGCTGACACCAATAAATTCTCC +
Preference number: 2 (lower is better)
Translates to: SVKGHSPLLSLWFVD*VRLKISRADTNKFS
Trigger: GGAGAATTTATTGGTGTCAGCCCTGGAGATTTTTAATCTAACCAAGTCCACAAACCACAGAGAAAGCAATGGACTGTGTCCTTTCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp AATGGGATACCTCTCTGTCCCAGCTATGACATAGTTTTCTGGATTTaGAAATGTGGGACTGAATTGGAGCAAGTCTGTAGACCTATCTCT +
Preference number: 2 (lower is better)
Translates to: NGIPLCPSYDIVFWI*KCGTELEQVCRPIS
Trigger: AGAGATAGGTCTACAGACTTGCTCCAATTCAGTCCCACATTTCAAAATCCAGAAAACTATGTCATAGCTGGGACAGAGAGGTATCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTTTTCTCCTAGAGTATaGTGCCTTCCAAAATCAAAT +
Preference number: 2 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLFSPRV*CLPKSN
Trigger: ATTTGATTTTGGAAGGCAGCATACTCTAGGAGAAAA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGA +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTISFLV*CIPACR
Trigger: TCTACATGCAGGTATACACCAAACCAGAAAGCTGAT...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp ATGAGAGCTTTGGAACTCTTGAAATCAGTGAAAGGACACAGTCCATaGCTTTCTCTGTGGTTTGTGGACTTGGTTAGATTAAAAATCTCC +
Preference number: 2 (lower is better)
Translates to: MRALELLKSVKGHSP*LSLWFVDLVRLKIS
Trigger: GGAGATTTTTAATCTAACCAAGTCCACAAACCACAGAGAAAGCAATGGACTGTGTCCTTTCACTGATTTCAAGAGTTCCAAAGCTCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CTGACTGATGGAAGGTTAATGTGTTTGCTGATTTACAAGATGGGTTaGAATATCACAAACTTGGACTCTCCATTCTTGCTTCACAAGCCT +
Preference number: 2 (lower is better)
Translates to: LTDGRLMCLLIYKMG*NITNLDSPFLLHKP
Trigger: AGGCTTGTGAAGCAAGAATGGAGAGTCCAAGTTTGTGATATTCAAACCCATCTTGTAAATCAGCAAACACATTAACCTTCCATCAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR GCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATTTTCTCCTAGAGTATaGTGCCTTCCAAAATCAAAT +
Preference number: 2 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTFSPRV*CLPKSN
Trigger: ATTTGATTTTGGAAGGCAGCATACTCTAGGAGAAAA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp ACCAGTGAGGCAAACAGAAGACCGAAAGAATGTCTTATTCTTCCATaGTTTTCATTGAGAGCTCTGATTTTTAGAGCTGGAGATTATAGC +
Preference number: 2 (lower is better)
Translates to: TSEANRRPKECLILP*FSLRALIFRAGDYS
Trigger: GCTATAATCTCCAGCTCTAAAAATCAGAGCTCTCAATGAAAACAATGGAAGAATAAGACATTCTTTCGGTCTTCTGTTTGCCTCACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 90 bp CACATAAGGAATTTAAAAAGTAGGTGCATGGAATGTAAGAAAATATaGCACAGTTCCTTGTTTACTCACACAAGACACGTATCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: HIRNLKSRCMECKKI*HSSLFTHTRHVSQG
Trigger: CCCCTGAGATACGTGTCTTGTGTGAGTAAACAAGGAACTGTGCAATATTTTCTTACATTCCATGCACCTACTTTTTAAATTCCTTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CAA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACA +
Preference number: 3 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRCRMRM*SPRPRT
Trigger: TGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp ATGCGAATGTTGAGCCCGAGACCCCGCACATCACAGTaGCCCTCCCCACCCTGGCTCTCTGGCCACCGCAGG +
Preference number: 3 (lower is better)
Translates to: MRMLSPRPRTSQ*PSPPWLSGHRR
Trigger: CCTGCGGTGGCCAGAGAGCCAGGGTGGGGAGGGCCACTGTGATGTGCGGGGTCTCGGGCTCAACATTCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACA +
Preference number: 3 (lower is better)
Translates to: IPGWPSPSGPPQALVRSACRMRM*SPRPRT
Trigger: TGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAGGGCCAGCACCCCATaGCTACTCCCCTCTGCGAAG +
Preference number: 3 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLRASTP*LLPSAK
Trigger: CTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCCT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp TGGCAGTCATGGTCAGGTCTAGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCTGGGAGGGCCAGCACC +
Preference number: 3 (lower is better)
Translates to: WQSWSGLEAWRE*GDDRVSGRAST
Trigger: GGTGCTGGCCCTCCCAGACACCCGATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCATGACTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TCTCTGCTGACAGAACCTGCAGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGACGGAAAGGGAGTTGG +
Preference number: 3 (lower is better)
Translates to: SLLTEPAAESPG*GEGGAGRKGSW
Trigger: CCAACTCCCTTTCCGTCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTCAGCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp GAGGCAGTCGTGTGGCCCAAGACACTCCCAAGACACTaGGGGAGCCCTGAGGGCAGAAGCCTGGTTAGGAGG +
Preference number: 3 (lower is better)
Translates to: EAVVWPKTLPRH*GSPEGRSLVRR
Trigger: CCTCCTAACCAGGCTTCTGCCCTCAGGGCTCCCCCAGTGTCTTGGGAGTGTCTTGGGCCACACGACTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp AGGCCCTTAAACTTCAGGTACGAGGGCATCCCTGGGTaGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTG +
Preference number: 3 (lower is better)
Translates to: RPLNFRYEGIPG*PSPSGPPQALV
Trigger: CACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGATGCCCTCGTACCTGAAGTTTAAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp ATGGTCAGGTCTAGAGGCCTGGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGCCAGCACCCCATTGCT +
Preference number: 3 (lower is better)
Translates to: MVRSRGLEGVRR*SGVWEGQHPIA
Trigger: AGCAATGGGGTGCTGGCCCTCCCAGACACCCGATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp GAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTaGGATGGGTGTCTCTTGGAAGTCTATCGCCCTCTA +
Preference number: 3 (lower is better)
Translates to: EPPASVSPPWVE*DGCLLEVYRPL
Trigger: TAGAGGGCGATAGACTTCCAAGAGACACCCATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 72 bp CAGCCTGAGTGGCAGTCATGGTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGATCGGGTGTCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: QPEWQSWSGLEA*RECGDDRVSGR
Trigger: CCTCCCAGACACCCGATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCATGACTGCCACTCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp GAGCAGGGGTGGAGAAGGCAGCCTGAGTGGCAGTCATaGTCAGGTCTAGAGGCCTGGAGGGAGTGCGGAGAT +
Preference number: 3 (lower is better)
Translates to: EQGWRRQPEWQS*SGLEAWRECGD
Trigger: ATCTCCGCACTCCCTCCAGGCCTCTAGACCTGACCATGACTGCCACTCAGGCTGCCTTCTCCACCCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp GTAGTCCCTGGCCTTCCAGCCGCACGACTCCAGGAATaGATCCCCAGTGTGGGGTCTGACAGTGGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: VVPGLPAARLQE*IPSVGSDSGFH
Trigger: GTGAAAGCCACTGTCAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATaGGTGGAGTGGGATGGGTGTCTCTTGGAAGTCTAT +
Preference number: 3 (lower is better)
Translates to: SHKEPPASVSPP*VEWDGCLLEVY
Trigger: ATAGACTTCCAAGAGACACCCATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 72 bp GCTACATCCACCGGCAGTTTTCCACCACACTCCCTGTaGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGT +
Preference number: 3 (lower is better)
Translates to: ATSTGSFPPHSL*SLPTRSRRHLC
Trigger: ACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCACAGGGAGTGTGGTGGAAAACTGCCGGTGGATGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 72 bp TTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTaGGGTCTGACAGTGGCTTTCACAACCCCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: FQPHDSRNASPV*GLTVAFTTPSL
Trigger: GAGGCTGGGGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp GCTCTAGTGAGGAGTGCGGTGGCTGTCCAGGACATCTaGGGACATCGCTGTGGGGCAGGCATTGTGGGATGT +
Preference number: 3 (lower is better)
Translates to: ALVRSAVAVQDI*GHRCGAGIVGC
Trigger: ACATCCCACAATGCCTGCCCCACAGCGATGTCCTCAGATGTCCTGGACAGCCACCGCACTCCTCACTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp ACAGAGCTGAGGACCATGGTCTACCAGGTACCCCAGTaGCTGCACAAAGGGATGATGCTGTGGGGACCTGCC +
Preference number: 3 (lower is better)
Translates to: TELRTMVYQVPQ*LHKGMMLWGPA
Trigger: GGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTAGACCATGGTCCTCAGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp GCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGATaGGTGTCTCTTGGAAGTCTATCGCCCTCTAAAGTC +
Preference number: 3 (lower is better)
Translates to: AGICVPAMGGVG*VSLGSLSPSKV
Trigger: GACTTTAGAGGGCGATAGACTTCCAAGAGACACCCATCCCACTCCACCCATGGCGGGGACACAGATGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 72 bp AGTAGCCTATCCGGTCAGCCCACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCAGCTTCAGACCACAGT +
Preference number: 3 (lower is better)
Translates to: SSLSGQPTDWTR*PLQTQAASDHS
Trigger: ACTGTGGTCTGAAGCTGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGATAGGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp ATGAGACCGAGTAGCCTATCCGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAAACCCAGGCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: MRPSSLSGQPTD*TRWPLQTQAAS
Trigger: TGAAGCTGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGATAGGCTACTCGGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TGTGTCTGTTGGGAGGAAAGCAGAGAGGGTAGTCCCTaGCCTTCCAGCCGCACGACTCCAGGAATGCATCCC +
Preference number: 3 (lower is better)
Translates to: CVCWEESREGSP*PSSRTTPGMHP
Trigger: GGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGACTACCCTCTCTGCTTTCCTCCCAACAGACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TTGGCCAGAGCAGGAGCTTCTGGGCTAACATCAGGCTaGGTTGGGAGCTTCAGGGGACTTGCTAGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: LARAGASGLTSG*VGSFRGLASGR
Trigger: CCTGCCACTAGCAAGTCCCCTGAAGCTCCCAACCCAGCCTGATGTTAGCCCAGAAGCTCCTGCTCTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCGGGGGTATGGCTTTTaGGGCAAAGGTGGCCCACCC +
Preference number: 3 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRGYGF*GKGGPP
Trigger: GGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCCG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCGGGGGTATGGCTTTTaGGGCAAAGGTGGCCCACCC +
Preference number: 3 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSRGYGF*GKGGPP
Trigger: GGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCCG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTTGATGTGGCTTTGCTaGTTCCATGAAGATGGATGG +
Preference number: 3 (lower is better)
Translates to: IPGWPSPSGPPQALVRSALMWLC*FHEDGW
Trigger: CCATCCATCTTCATGGAACAAGCAAAGCCACATCAA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAGGGCCAGCACCCCATaGCTACTCCCCTCTGCGAAG +
Preference number: 3 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGRASTP*LLPSAK
Trigger: CTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCCT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTCGCCTGGAGGACCTTaGTTTGCTTTTGCTAATAGG +
Preference number: 3 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLSPGGP*FAFANR
Trigger: CCTATTAGCAAAAGCAAACAAAGGTCCTCCAGGCGA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp GGGAACATGACTCCCCCTCGGAGACAAAGCCAGGGCTaGAAGCTGTGTCTTCAGAGCCTCAGCCCTATGCTT +
Preference number: 3 (lower is better)
Translates to: GNMTPPRRQSQG*KLCLQSLSPML
Trigger: AAGCATAGGGCTGAGGCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGCAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTA +
Preference number: 3 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEQERLL*VLGLSV
Trigger: TACACTTAGACCCAGGACCAAGAGCAATCGCTCTTG...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCCCAATAGCCTGGAGTaGATTCCCCCAGCCCCAACC +
Preference number: 3 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGPNSLE*IPPAPT
Trigger: GGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGGG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp CTCCTGTCAGAAGCCACGCATGTCACCAGGACAAGCTaGCATGGAACCACCCCACTTATTCCTGTCCCAGAC +
Preference number: 3 (lower is better)
Translates to: LLSEATHVTRTS*HGTTPLIPVPD
Trigger: GTCTGGGACAGGAATAAGTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGACATGCGTGGCTTCTGACAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 72 bp TCAAGGATAGGAGTCTTTGGCCAGAGCAGGAGCTTCTaGGCTAACATCAGGCTGGGTTGGGAGCTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: SRIGVFGQSRSF*ANIRLGWELQG
Trigger: CCCCTGAAGCTCCCAACCCAGCCTGATGTTAGCCCAGAAGCTCCTGCTCTGGCCAAAGACTCCTATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCTGGGTCTAAGTGTATaGGACCAGGCCATCGGGGCT +
Preference number: 3 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALGLSV*DQAIGA
Trigger: AGCCCCGATGGCCTGGTCCAATACACTTAGACCCAG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTA +
Preference number: 3 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSEEQER*LLVLGL
Trigger: TAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTAGGGCCAGCACCCCATaGCTACTCCCCTCTGCGAAG +
Preference number: 3 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGRASTP*LLPSAK
Trigger: CTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCCT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp AACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTCTCTaGAATTGGAACCGCCTCCCTCCAGCTATAAGGACC +
Preference number: 3 (lower is better)
Translates to: NLQTFLSSQLPL*NWNRLPPAIRT
Trigger: GGTCCTTATAGCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCTGGAGAGAAAGGTCTGGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp AGCCACTCAGGTCCTTTCCCCTCACCACCAGCATCCTaGCTTCCAAGGGATGGCCACAGATTAGACGATTCA +
Preference number: 3 (lower is better)
Translates to: SHSGPFPSPPAS*LPRDGHRLDDS
Trigger: TGAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAGGATGCTGGTGGTGAGGGGAAAGGACCTGAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TTTCCCCTCACCACCAGCATCCTGCCTTCCAAGGGATaGCCACAGATTAGACGATTCAAAGGTGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: FPLTTSILPSKG*PQIRRFKGAGL
Trigger: GAGCCCAGCACCTTTGAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAGGATGCTGGTGGTGAGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TACACAAGCAGGAAGGGGGCAAGTGTGTTGGAGCAGTaGCTGAGAGCCCTCAAGGATAGGAGTCTTTGGCCA +
Preference number: 3 (lower is better)
Translates to: YTSRKGASVLEQ*LRALKDRSLWP
Trigger: TGGCCAAAGACTCCTATCCTTGAGGGCTCTCAGCCACTGCTCCAACACACTTGCCCCCTTCCTGCTTGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TCCCAGCTGCCCTCAAGTACAAACTTCATGCCCTTATaGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: SQLPSSTNFMPL*ANLQTFLSSQL
Trigger: GAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTGTACTTGAGGGCAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTA +
Preference number: 3 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGEEQER*LLVLGL
Trigger: TAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACA +
Preference number: 3 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGCRMRM*SPRPRT
Trigger: TGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCCCAATAGCCTGGAGTaGATTCCCCCAGCCCCAACC +
Preference number: 3 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLPNSLE*IPPAPT
Trigger: GGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGGG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGATCTGCTACGTGAACTaGCCTATTGATGTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEICYVN*PIDVAL
Trigger: CAAAGCCACATCAATAGGCAAGTTCACGTAGCAGAT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp GCTTCACAAGCCTTCACCGGGAGGACGGTAGTGTCATaGCGAAGGGCTACAAAGGTACTAGGATGGGATGAG +
Preference number: 3 (lower is better)
Translates to: ASQAFTGRTVVS*RRATKVLGWDE
Trigger: CTCATCCCATCCTAGTACCTTTGTAGCCCTTCGTCATGACACTACCGTCCTCCCGGTGAAGGCTTGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp CTTCTCAGGGCAGGCACCTTCTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACCTTGGGTCAAGTGCAC +
Preference number: 3 (lower is better)
Translates to: LLRAGTFWSPSD*QPFHFTLGQVH
Trigger: GTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCTAGGAGGAATAAAGTaGCAGGGAGGATGTGGGGGA +
Preference number: 3 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGLGGIK*QGGCGG
Trigger: TCCCCCACATCCTCCCTGCAACTTTATTCCTCCTAG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCTGGAGGACCTTTGTTaGCTTTTGCTAATAGGTCTT +
Preference number: 3 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVLEDLC*LLLIGL
Trigger: AAGACCTATTAGCAAAAGCAAACAAAGGTCCTCCAG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCCCAATAGCCTGGAGTaGATTCCCCCAGCCCCAACC +
Preference number: 3 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLPNSLE*IPPAPT
Trigger: GGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGGG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGTTTCCTGTTCCTGTaGGGAGGCACACCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGGFLFL*GGTPCR
Trigger: TCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCAAGGAGAGGGAAATCTaGGGCTTTAGGCTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSKEREI*GFRLPL
Trigger: CAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTT...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCTTGGCAAAGCCTTTTaGACACAGGAAGGCATGGAG +
Preference number: 3 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWLGKAF*TQEGME
Trigger: CTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAAG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGAGGCCCTCAAGTCTTaGTGGACAAAGGAGGATAAG +
Preference number: 3 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWEALKS*WTKEDK
Trigger: CTTATCCTCCTTTGTCCACAAAGACTTGAGGGCCTC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGCTCCCTCTCTGAAATaGGAACCGCCTCCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLAPSLK*EPPPSS
Trigger: GCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp TGGGGGAGCCCTGAGGGCAGAAGCCTGGTTAGGAGGTaGAGTAATTCTTGGCAAAGCCTTTTTGACACAGGA +
Preference number: 3 (lower is better)
Translates to: WGSPEGRSLVRR*SNSWQSLFDTG
Trigger: TCCTGTGTCAAAAAGGCTTTGCCAAGAATTACTTCACCTCCTAACCAGGCTTCTGCCCTCAGGGCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp ACAGAATTGAGGAGGAGTCCATGCCCCCTGCACAGATaGTCTGCAAGCTGTCAGCTAGGTTGTAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: TELRRSPCPLHR*SASCQLGCKAA
Trigger: AGCTGCTTTACAACCTAGCTGACAGCTTGCAGAGCATCTGTGCAGGGGGCATGGACTCCTCCTCAATTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CCA 72 bp GCTTTCTGGTTTGGTGTATACCTGCATGTAGACACCTaGGAAGGGCATTCTCAGCCACTCAGGTCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: AFWFGVYLHVDT*EGHSQPLRSFP
Trigger: GGGAAAGGACCTGAGTGGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAGGTATACACCAAACCAGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGGGATGAGAAATGTCTaGGAATCAACTCATCAACAA +
Preference number: 3 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEGMRNV*ESTHQQ
Trigger: TTGTTGATGAGTTGATTCCAAGACATTTCTCATCCC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGAGCTTCAGGGGACTaGCTAGTGGCAGGAACCAAA +
Preference number: 3 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGASGD*LVAGTK
Trigger: TTTGGTTCCTGCCACTAGCAAGTCCCCTGAAGCTCC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCTGGAGGACCTTTGTTaGCTTTTGCTAATAGGTCTT +
Preference number: 3 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSLEDLC*LLLIGL
Trigger: AAGACCTATTAGCAAAAGCAAACAAAGGTCCTCCAG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTGGGGGCTGGAGAACTaGGTGCTGAGAAGCTTTGAC +
Preference number: 3 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCWGLEN*VLRSFD
Trigger: GTCAAAGCTTCTCAGCACCAAGTTCTCCAGCCCCCA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAAATGTGGGACTGAATaGGAGCAAGTCTGTAGACCT +
Preference number: 3 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWKCGTE*EQVCRP
Trigger: AGGTCTACAGACTTGCTCCAATTCAGTCCCACATTT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGAGGAGAAATTTGAATaGGGGGCAAGGTTGGAACTT +
Preference number: 3 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWEEKFE*GARLEL
Trigger: AAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCTC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGAGGGGAGGAGAAATTaGAATTGGGGGCAAGGTTGG +
Preference number: 3 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLEGRRN*NWGQGW
Trigger: CCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCTC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGAGGGGAGGAGAAATTaGAATTGGGGGCAAGGTTGG +
Preference number: 3 (lower is better)
Translates to: VFSSLRRESIKETHSHNIEGRRN*NWGQGW
Trigger: CCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCTC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp CTCTTGGAAGTCTATCGCCCTCTAAAGTCACACCTGTaGCCTCCAGTAACTCCTGTCAGAAGCCACGCATGT +
Preference number: 3 (lower is better)
Translates to: LLEVYRPLKSHL*PPVTPVRSHAC
Trigger: ACATGCGTGGCTTCTGACAGGAGTTACTGGAGGTCACAGGTGTGACTTTAGAGGGCGATAGACTTCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR TCA 72 bp CAAGAGGGCTTCCATGGCACACAGTTGGTGACCTATTaGATGGTTAGGCCCTTAAACTTCAGGTACGAGGGC +
Preference number: 3 (lower is better)
Translates to: QEGFHGTQLVTY*MVRPLNFRYEG
Trigger: GCCCTCGTACCTGAAGTTTAAGGGCCTAACCATTCAATAGGTCACCAACTGTGTGCCATGGAAGCCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TTTCCCAGATTCGGACAGGATGACAGGAAATGTATGTaGGAGGTAACATGCCAGCTCTTCTCAGGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: FPRFGQDDRKCM*EVTCQLFSGQA
Trigger: TGCCTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACATACATTTCCTGTCATCCTGTCCGAATCTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTTGGCAAAGCCTTTTaGACACAGGAAGGCATGGAG +
Preference number: 3 (lower is better)
Translates to: VFSSLRRESIKETHSHNILGKAF*TQEGME
Trigger: CTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp GCACTAGGAGATTTCTGTGATGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTATCCGGTCAGCCCACT +
Preference number: 3 (lower is better)
Translates to: ALGDFCDAVLDE*MRPSSLSGQPT
Trigger: AGTGGGCTGACCGGATAGGCTACTCGGTCTCATTCATTCATCTAGAACCGCATCACAGAAATCTCCTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp AGCTTTGACACTGGAGATGGGATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGACACCTGGGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: SFDTGDGISFLV*CIPACRHLGRA
Trigger: TGCCCTTCCCAGGTGTCTACATGCAGGTATACACCAAACCAGAAAGCTGATCCCATCTCCAGTGTCAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp AAAGAGGGGAGGAGAAATTTGAATTGGGGGCAAGGTTaGAACTTTCTAAGAGGCAGTCGTGTGGCCCAAGAC +
Preference number: 3 (lower is better)
Translates to: KEGRRNLNWGQG*NFLRGSRVAQD
Trigger: GTCTTGGGCCACACGACTGCCTCTTAGAAAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp GGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTaGGTCAAGTGCACAGTTGCCTGTGGAAGGAATATG +
Preference number: 3 (lower is better)
Translates to: GVRVIGSPFILP*VKCTVACGRNM
Trigger: CATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TGCTGGCAGGGAATGAAAGCCCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCATCTAGTCAAAGCCCC +
Preference number: 3 (lower is better)
Translates to: CWQGMKALQCKS*MKLQSSSSQSP
Trigger: GGGGCTTTGACTAGATGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAGGGCTTTCATTCCCTGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTA +
Preference number: 3 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMQERLL*VLGLSV
Trigger: TACACTTAGACCCAGGACCAAGAGCAATCGCTCTTG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTA +
Preference number: 3 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCQERLL*VLGLSV
Trigger: TACACTTAGACCCAGGACCAAGAGCAATCGCTCTTG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTA +
Preference number: 3 (lower is better)
Translates to: LPSFLASRPKGEAEEILEEEQER*LLVLGL
Trigger: TAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGGAGCTTCAGGGGACTaGCTAGTGGCAGGAACCAAA +
Preference number: 3 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTGASGD*LVAGTK
Trigger: TTTGGTTCCTGCCACTAGCAAGTCCCCTGAAGCTCC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCCTTTCATTTTACCTaGGGTCAAGTGCACAGTTGC +
Preference number: 3 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPFHFT*GQVHSC
Trigger: GCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCTCAGTGTCCAGACTaGGTCTTCAGGACACATATT +
Preference number: 3 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPQCPD*VFRTHI
Trigger: AATATGTGTCCTGAAGACCAAGTCTGGACACTGAGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp TCAGAGCCTTTCAGCCAGACAGTGGTAAGGCTGGGATaGGAAATGTCTTGGAATCAACTCATCAACAACCCC +
Preference number: 3 (lower is better)
Translates to: SEPFSQTVVRLG*EMSWNQLINNP
Trigger: GGGGTTGTTGATGAGTTGATTCCAAGACATTTCTCATCCCAGCCTTACCACTGTCTGGCTGAAAGGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp AACCGCCTCCCTCCAGCTATAAGGACCGTATCCAAATaGAAACTCCAAACTCAGAATTCCCCAGAATTCCAC +
Preference number: 3 (lower is better)
Translates to: NRLPPAIRTVSK*KLQTQNSPEFH
Trigger: GTGGAATTCTGGGGAATTCTGAGTTTGGAGTTTCCATTTGGATACGGTCCTTATAGCTGGAGGGAGGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGAAAAGAATCATTATaGTGCTTATGGACACAGCAG +
Preference number: 3 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRKESL*CLWTQQ
Trigger: CTGCTGTGTCCATAAGCACAATAATGATTCTTTTCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACTAGGAGGAATAAAGTaGCAGGGAGGATGTGGGGGA +
Preference number: 3 (lower is better)
Translates to: LPSFLASRPKGEAEEILELGGIK*QGGCGG
Trigger: TCCCCCACATCCTCCCTGCAACTTTATTCCTCCTAG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTCGCCTGGAGGACCTTaGTTTGCTTTTGCTAATAGG +
Preference number: 3 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLSPGGP*FAFANR
Trigger: CCTATTAGCAAAAGCAAACAAAGGTCCTCCAGGCGA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGGATGAGAAATGTCTaGGAATCAACTCATCAACAA +
Preference number: 3 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGMRNV*ESTHQQ
Trigger: TTGTTGATGAGTTGATTCCAAGACATTTCTCATCCC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAAATGTGGGACTGAATaGGAGCAAGTCTGTAGACCT +
Preference number: 3 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGKCGTE*EQVCRP
Trigger: AGGTCTACAGACTTGCTCCAATTCAGTCCCACATTT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp AAAAGGAATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCTGGGATGGGTGTCTCTaGGAAGTCTATCGCCCTCTA +
Preference number: 3 (lower is better)
Translates to: KRNNSQEANTHIANAATSWDGCL*EVYRPL
Trigger: TAGAGGGCGATAGACTTCCAAGAGACACCCATCCCA...GGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTATTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CAA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGATAAGGGCACTGCTGTaGGATCTGACTGTTTTTAGG +
Preference number: 3 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMIRALL*DLTVFR
Trigger: CCTAAAAACAGTCAGATCCAACAGCAGTGCCCTTAT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp AGGTTCCAGCCCCAGAAGCCTCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGGCTTTGCTTGTTCCAT +
Preference number: 3 (lower is better)
Translates to: RFQPQKPLLSAT*TCLLMWLCLFH
Trigger: ATGGAACAAGCAAAGCCACATCAATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTCTGGGGCTGGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp AAACCAGGCAGAACTTTCAGGGCAGGAGAGAACCTGTaGAGATTCCAGTTCATTTCTGTTAGAGCAACAGAG +
Preference number: 3 (lower is better)
Translates to: KPGRTFRAGENL*RFQFISVRATE
Trigger: CTCTGTTGCTCTAACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR GCA 72 bp GACACATATTCCAGAGTGGGTTATCATGACATTCATTaGCACACAACAGCCTGTGAACACGTTCCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: DTYSRVGYHDIH*HTTACEHVPLQ
Trigger: CTGCAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp CCTTTGTTTGCTTTTGCTAATAGGTCTTTGTCCCTTTaGTCCAGAGGAGGCACGGATCTGAAGGATCAGCTA +
Preference number: 3 (lower is better)
Translates to: PLFAFANRSLSL*SRGGTDLKDQL
Trigger: TAGCTGATCCTTCAGATCCGTGCCTCCTCTGGATCAAAGGGACAAAGACCTATTAGCAAAAGCAAACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CCA 72 bp TGTCCAGACTTGGTCTTCAGGACACATATTCCAGAGTaGGTTATCATGACATTCATTGCCACACAACAGCCT +
Preference number: 3 (lower is better)
Translates to: CPDLVFRTHIPE*VIMTFIATQQP
Trigger: AGGCTGTTGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACCAAGTCTGGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTAGAAAAGAATCATTATaGTGCTTATGGACACAGCAG +
Preference number: 3 (lower is better)
Translates to: VFSSLRRESIKETHSHNIRKESL*CLWTQQ
Trigger: CTGCTGTGTCCATAAGCACAATAATGATTCTTTTCT...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR TCA 72 bp AGAAGCCTCTTTTATCTGCTACGTGAACTTGCCTATTaGTGTGGCTTTGCTTGTTCCATGAAGATGGATGGG +
Preference number: 3 (lower is better)
Translates to: RSLFYLLRELAY*CGFACSMKMDG
Trigger: CCCATCCATCTTCATGGAACAAGCAAAGCCACATCAATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR-3UTR CAA 90 bp GACAGGGATACACTACCCCTACAACAGAATTCACATTTGATCTATAACAGCACAAGGCGAACACACACATaGCAAATGCTGCTACATCCA +
Preference number: 3 (lower is better)
Translates to: DRDTLPLQQNSHLIYNSTRRTHT*QMLLHP
Trigger: TGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCT...TGTGCTGTTATAGATCAAATGTGAATTCTGTTGTAGGGGTAGTGTATCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAGAAAAGAATCATTATaGTGCTTATGGACACAGCAG +
Preference number: 3 (lower is better)
Translates to: LPSFLASRPKGEAEEILERKESL*CLWTQQ
Trigger: CTGCTGTGTCCATAAGCACAATAATGATTCTTTTCT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGACGCCGGCCACGATaGCGAAGGCGATCACCCCGC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARRRPR*RRRSPR
Trigger: GCGGGGTGATCGCCTTCGTCATCGTGGCCGGCGTCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGAAGGTGGTCGGGGGTaGGAATGGGGCCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAEGGRG*EWGLAP
Trigger: GGGGGCTAGGCCCCATTCTCACCCCCGACCACCTTC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGATCCGGTCAGCCCACTaGTTGGACCCGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRIRSAH*LDPLAP
Trigger: AGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGAT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGGCTCCGTGGACGCTaGGCAGCAGGTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGLRGR*AAGPGT
Trigger: AGTCCCTGGACCTGCTGCCCAGCGTCCACGGAGCCC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGCCGGCGACACCACCTTaGTGCTGGGCGTCTGTACCC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRPATPP*CWASVP
Trigger: GGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGG...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGGGACATGGCCCGGATaGGCCGGCGGGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLGTWPG*AGGVVP
Trigger: GGGAACGACCCCGCCGGCCCATCCGGGCCATGTCCC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGAGGTGGGCGGGCAGTaGCGGTCCCCCAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAEVGGQ*RSPNRA
Trigger: AGCTCTGTTGGGGGACCGCCACTGCCCGCCCACCTC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAEGVRR*SGVWEG
Trigger: GCCCTCCCAGACACCCGATCATCTCCGCACTCCCTC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGGGCCAGCACCCCATTaGTACTCCCCTCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRGPAPH*YSPLRR
Trigger: CCTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGCCGGGCTCTGGTAGTTaGTGCACTGGCGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRPGSGS*CTGAGP
Trigger: TGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGG...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGACAGGACCCTGTCCTaGGACATGGCCCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSADRTLS*DMARMG
Trigger: GCCCATCCGGGCCATGTCCCAGGACAGGGTCCTGTC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCGCTTGGCTGCCGTCTaGCTCTGGCCCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLRLAAV*LWPRVA
Trigger: CGCCACCCTGGGCCAGAGCCAGACGGCAGCCAAGCG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGGCCCAGGGTCCTTATaGGCGGGCAGTCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRGPGSL*AGSQLE
Trigger: TTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAGCACGTCTCGTAGGTaGCGGCCGCGCTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQESTSRR*RPRWPP
Trigger: CGGCGGCCAGCGCGGCCGTCACCTACGAGACGTGCT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGACAGAACCTGCAGCTaGGTCCCCCGGATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSADRTCS*VPRMGR
Trigger: TCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGTGGAGAAGGCAGCCTaGGTGGCAGTCATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRVEKAA*VAVMVR
Trigger: CCTGACCATGACTGCCACTCAGGCTGCCTTCTCCAC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGCCTGCACAAAGGGATaGTGCTGTGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAACTKG*CCGDLP
Trigger: GGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTAGGCGGGGAAGAGGCTaGGGTGGGCGGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVRRGRG*GGRAVA
Trigger: CGCCACTGCCCGCCCACCTCAGCCTCTTCCCCGCCT...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTCCGTGGAGAGCAGCTaGTCGTCGGACAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSASVESS*SSDRMR
Trigger: CCGCATCCTGTCCGACGAGCAGCTGCTCTCCACGGA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTGTCGTAGGAGACCTTaGCGAAGACGCCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRCRRRP*RRRRPR
Trigger: TCGTGGCCGGCGTCTTCGCCAAGGTCTCCTACGACA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCCCTGTCCTGGGACATaGCCCGGATGGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVPCPGT*PGWAGG
Trigger: CCCGCCGGCCCATCCGGGCCATGTCCCAGGACAGGG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGCGTCCGTGTGCGAGATaGCCCTGGACAGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARPCAR*PWTATA
Trigger: AGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACG...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGGGGGTATGGCTTTTTaGGCAAAGGTGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRGGMAF*AKVAHP
Trigger: GGGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGTCCCCCAACAGAGCTaGGGACCATGGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAVPQQS*GPWSTR
Trigger: CCTGGTAGACCATGGTCCTCAGCTCTGTTGGGGGAC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGCACGACTCCAGGAATaGATCCCCAGTGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRARLQE*IPSVGS
Trigger: AGACCCCACACTGGGGATGCATTCCTGGAGTCGTGC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGAGCCCTGGAGTCTGCTTaGCCGTACGCACAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PFPQGAAGICVPAMGGVGALESA*PYAQEC
Trigger: ACACTCCTGTGCGTACGGCCAAGCAGACTCCAGGGC...TCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTGCAGACTCGTAGGATaGGGGCAGGTGGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRCRLVG*GQVGQV
Trigger: AACTTGGCCCACCTGCCCCCATCCTACGAGTCTGCA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGCGCTTGGCTGCCGTCTaGCTCTGGCCCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPERLAAV*LWPRVA
Trigger: CGCCACCCTGGGCCAGAGCCAGACGGCAGCCAAGCG...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGGAAGGGTCACTCAGTaGGGACCAGAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRGRVTQ*GPESSS
Trigger: GCTGGAACTCTCTGGTCCCCACTGAGTGACCCTTCC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGACGATTCAAAGGTGCTaGGCTCAGGGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSATIQRC*AQGPSW
Trigger: CCAGCTGGGCCCCTGAGCCCAGCACCTTTGAATCGT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAGCACGTCTCGTAGGTaGCGGCCGCGCTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSSTSRR*RPRWPP
Trigger: CGGCGGCCAGCGCGGCCGTCACCTACGAGACGTGCT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGAAGGTGGTCGGGGGTaGGAATGGGGCCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVEGGRG*EWGLAP
Trigger: GGGGGCTAGGCCCCATTCTCACCCCCGACCACCTTC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAGCGGGTCCTGGGAGTaGAGGCGCTCCGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQESGSWE*RRSVES
Trigger: GCTCTCCACGGAGCGCCTGCACTCCCAGGACCCGCT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGACAAAGACGTCCGTGTaGGAGATGGCCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSATKTSV*EMALDS
Trigger: GCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGCCACCGTGTTGTGTCTaGGTGAGGCAAAGGCATGAC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRPPCCV*VRQRHD
Trigger: GTCATGCCTTTGCCTCACGCAGACACAACACGGTGG...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGTGGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGCCGCCATGGGTGGAGTaGGATGGGTGTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLWSLPTRSRRHLCPRHGPPWVE*DGCLLE
Trigger: TTCCAAGAGACACCCATCCCACTCCACCCATGGCGG...CCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCACAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGGACATGGCCCGGATaGGCCGGCGGGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGTWPG*AGGVVP
Trigger: GGGAACGACCCCGCCGGCCCATCCGGGCCATGTCCC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGACAGCAGCGGGTCCTaGGAGTGCAGGCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEDSSGS*ECRRSV
Trigger: CACGGAGCGCCTGCACTCCCAGGACCCGCTGCTGTC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGCTCTGGCCCAGGGTaGCGTATGAGTTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGSGPG*RMSYWR
Trigger: CCTCCAATAACTCATACGCCACCCTGGGCCAGAGCC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGGAAAAGTGTCACCCTaGGGGCTGGAGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRGKVSP*GLENLV
Trigger: CACCAAGTTCTCCAGCCCCCAGGGTGACACTTTTCC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGCAGAGCAGGAGCTTCTaGGCTAACATCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRQSRSF*ANIRLG
Trigger: ACCCAGCCTGATGTTAGCCCAGAAGCTCCTGCTCTG...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGCACGTCTCGTAGGTaGCGGCCGCGCTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSTSRR*RPRWPP
Trigger: CGGCGGCCAGCGCGGCCGTCACCTACGAGACGTGCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEEGVRR*SGVWEG
Trigger: GCCCTCCCAGACACCCGATCATCTCCGCACTCCCTC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGGTGCTGAGAAGCTTTaGCACTGGAGATGGGATCAG +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRGAEKL*HWRWDQ
Trigger: CTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCACC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGATGAGAGTGCATCTTaGTCATGCGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRDESAS*SCGSGP
Trigger: TGGACCGCTACCGCATGAGCAAGATGCACTCTCATC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGGCATGACGCTTGGCTaGCGTCTGGCTCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEGMTLG*RLALAQ
Trigger: CTGGGCCAGAGCCAGACGGCAGCCAAGCGTCATGCC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGGCATGACGCTTGGCTaGCGTCTGGCTCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVGMTLG*RLALAQ
Trigger: CTGGGCCAGAGCCAGACGGCAGCCAAGCGTCATGCC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTTCTGGCCACCGCAGGTaGCTCCTGGGAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVSGHRR*LLGAEQ
Trigger: CTGCTCTGCTCCCAGGAGGCACCTGCGGTGGCCAGA...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGAGGCCGTCACACCATaGCAACCCCCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVEAVTP*QPPGWR
Trigger: CCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGAGGCCGTCACACCATaGCAACCCCCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEEAVTP*QPPGWR
Trigger: CCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCCCTGTCCTGGGACATaGCCCGGATGGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSPCPGT*PGWAGG
Trigger: CCCGCCGGCCCATCCGGGCCATGTCCCAGGACAGGG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTACCGCAGGTGCCTCCTaGGAGCAGAGCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVTAGAS*EQSRGG
Trigger: TCCACCCCTGCTCTGCTCCCAGGAGGCACCTGCGGT...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGATTTTGGAGGACGATCTaGCCGGCGTGTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PFPQGAAGICVPAMGGVGFWRTI*PACSLW
Trigger: CCAAAGAGAACACGCCGGTCAGATCGTCCTCCAAAA...TCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGGTCGTAGGGCATGCTaGACTCATCTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVGRRAC*THLAGP
Trigger: GGGGCCTGCCAGATGAGTTCAGCATGCCCTACGACC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGCGTGAGGCAAAGGCATaGCGCTTGGCTGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEREAKA*RLAAVW
Trigger: CCAGACGGCAGCCAAGCGTCATGCCTTTGCCTCACG...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGAAGGTGGTCGGGGGTaGGAATGGGGCCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCEGGRG*EWGLAP
Trigger: GGGGGCTAGGCCCCATTCTCACCCCCGACCACCTTC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGACTATCACAGGCCATaGCATCTCAAACCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRDYHRP*HLKPRA
Trigger: AGCTCTGGGTTTGAGATGTCATGGCCTGTGATAGTC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGGGAAACTGAGGCACTaGGTGGGGAACATGACTCCC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLGKLRH*VGNMTP
Trigger: GGGAGTCATGTTCCCCACTCAGTGCCTCAGTTTCCC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGATGGTCACCAGGACAAGCTaGCATGGAACCACCCCACTT +
Preference number: 4 (lower is better)
Translates to: LPTRSRRHLCPRHGWSGMVTRTS*HGTTPL
Trigger: AAGTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGAC...CATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGCATTGTGGGATGTGTaGAGCTCAGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLALWDV*SSVEVG
Trigger: CCCCACCTCCACTGAGCTGCACACATCCCACAATGC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTTGGTGCACTGGCGCTaGTCCAGCTTCTCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQELVHWR*SSFSWR
Trigger: GCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAGGTGGGCCAAGTTCTaGAACGAGCGGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLRWAKF*NEREKE
Trigger: CTCCTTCTCCCGCTCGTTCCAGAACTTGGCCCACCT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGGACATGGCCCGGATaGGCCGGCGGGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGTWPG*AGGVVP
Trigger: GGGAACGACCCCGCCGGCCCATCCGGGCCATGTCCC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCGCTTGGCTGCCGTCTaGCTCTGGCCCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRLAAV*LWPRVA
Trigger: CGCCACCCTGGGCCAGAGCCAGACGGCAGCCAAGCG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSAESPG*GEGGAG
Trigger: TCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCCTGAGTGGCAGTCATaGTCAGGTCTAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLPEWQS*SGLEAW
Trigger: CCAGGCCTCTAGACCTGACCATGACTGCCACTCAGG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGAAGGCAGCCTGAGTaGCAGTCATGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARRQPE*QSWSGL
Trigger: TAGACCTGACCATGACTGCCACTCAGGCTGCCTTCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGGGGAGAGCAGGTGCTaGCAGGGAATGAAAGCCCTA +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLGESRC*QGMKAL
Trigger: TAGGGCTTTCATTCCCTGCCAGCACCTGCTCTCCCC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGAGGGCATCCCTGGGTaGCCGAGCCCATCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSEGIPG*PSPSGP
Trigger: TGGGCCTGATGGGCTCGGCCACCCAGGGATGCCCTC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp ATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACATCACAGTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: MWEQVEPCRMRM*SPRPRTSQWPS
Trigger: GGAGGGCCACTGTGATGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCGTGTTGTGTCTGCGTaGGGCAAAGGCATGACGCTT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLRVVSA*GKGMTL
Trigger: AAGCGTCATGCCTTTGCCTCACGCAGACACAACACG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGTCCCCCAACAGAGCTaGGGACCATGGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEVPQQS*GPWSTR
Trigger: CCTGGTAGACCATGGTCCTCAGCTCTGTTGGGGGAC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGGGGAGGAGAAATTTaGATTGGGGGCAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARGGEI*IGGKVG
Trigger: TCCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGACACACACATTGCAAATaGTGCTACATCCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: PFPQGAAGICVPAMGGVGHTHCK*CYIHRQ
Trigger: CTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTG...TCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp ACACTCCCTGTGGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCACCTGCACAGATGCTCTaGAAGCTGTCAGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLPVVPSHKEPPASVSPPPAQML*KLSARL
Trigger: CAACCTAGCTGACAGCTTGCAGAGCATCTGTGCAGG...TGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCACAGGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTCTCGTGGCGCTTCTTaGAGCAGAAGCGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLSRGAS*SRSGSS
Trigger: GCTACTACCGCTTCTGCTGCAAGAAGCGCCACGAGA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGGCTCTGGTAGTTGGTaGACTGGCGCTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVGSGSW*TGAGPA
Trigger: AGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAAGCCCTTGGCTCCGTaGACTGGGGTATCAACTCAC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLKPLAP*TGVSTH
Trigger: GTGAGTTGATACCCCAGTGCACGGAGCCAAGGGCTT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTTACCTTGGGTCAAGTaGACAGTTGCCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSALPWVK*TVACGR
Trigger: CCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTTTCACAGTGTGCTATaGGGATTGGTCCCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRFHSVL*GLVPVV
Trigger: GACAACAGGGACCAATCCCCATAGCACACTGTGAAA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCCGGCGACACCACCTTaGTGCTGGGCGTCTGTACCC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCPATPP*CWASVP
Trigger: GGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGCAACGGCTTCTGTTaGGACATCTGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGNGFC*DIWMTL
Trigger: CAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGACAGGACCCTGTCCTaGGACATGGCCCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSDRTLS*DMARMG
Trigger: GCCCATCCGGGCCATGTCCCAGGACAGGGTCCTGTC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGACAGCAGCGGGTCCTaGGAGTGCAGGCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPDSSGS*ECRRSV
Trigger: CACGGAGCGCCTGCACTCCCAGGACCCGCTGCTGTC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGAGTTATTGGAGGCACTaGGATGAGAGTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRSYWRH*DESASC
Trigger: GCAAGATGCACTCTCATCCCAGTGCCTCCAATAACT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVGQPTD*TRWPLQ
Trigger: TTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLSGLEA*RECGDD
Trigger: ATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAGTCCTCCCATGGTGTaGCATTCAGGGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLSPPMV*HSGVTA
Trigger: TGCAGTGACCCCTGAATGCCACACCATGGGAGGACT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCCGTGGCTTCTCATGTaGCGGGATCTGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLPWLLM*RDLGNT
Trigger: AGTGTTACCCAGATCCCGCCACATGAGAAGCCACGG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGTCGTAGGGCATGCTaGACTCATCTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGRRAC*THLAGP
Trigger: GGGGCCTGCCAGATGAGTTCAGCATGCCCTACGACC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTTGGAGGCACTGGGATaGGAGTGCATCTTGCTCATG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLLEALG*ECILLM
Trigger: CATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTAGGCGGGGAAGAGGCTaGGGTGGGCGGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGRRGRG*GGRAVA
Trigger: CGCCACTGCCCGCCCACCTCAGCCTCTTCCCCGCCT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGCAGTTGGTGACCTATTaGATGGTTAGGCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRQLVTY*MVRPLN
Trigger: GTTTAAGGGCCTAACCATTCAATAGGTCACCAACTG...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAGCGGGTCCTGGGAGTaGAGGCGCTCCGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGSGSWE*RRSVES
Trigger: GCTCTCCACGGAGCGCCTGCACTCCCAGGACCCGCT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGGGCCAGCACCCCATTaGTACTCCCCTCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCGPAPH*YSPLRR
Trigger: CCTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGATGATGGGTGGAGTGGGATaGGTGTCTCTTGGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: LPTRSRRHLCPRHGWSGMMGGVG*VSLGSL
Trigger: TAGACTTCCAAGAGACACCCATCCCACTCCACCCAT...CATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLGHRAR*LMSGCC
Trigger: ACAACATCCTGACATCAGCCACCGAGCCCTATGACC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTGCAGACTCGTAGGATaGGGGCAGGTGGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQECRLVG*GQVGQV
Trigger: AACTTGGCCCACCTGCCCCCATCCTACGAGTCTGCA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCAGTGCAGGCGCTCCGTaGAGAGCAGCTGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSSAGAP*RAAARR
Trigger: CCGACGAGCAGCTGCTCTCCACGGAGCGCCTGCACT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGGCTCTGGCCCAGGGTaGCGTATGAGTTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEGSGPG*RMSYWR
Trigger: CCTCCAATAACTCATACGCCACCCTGGGCCAGAGCC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQETDWTR*PLQTQA
Trigger: TGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCCCACCCTGGCTCTCTaGCCACCGCAGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGPTLAL*PPQVPP
Trigger: AGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCCCACCCTGGCTCTCTaGCCACCGCAGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAPTLAL*PPQVPP
Trigger: AGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGCATGTGGGAACAGGTaGAGCCCTGCAGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEACGNR*SPAGCE
Trigger: TTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGCATGTGGGAACAGGTaGAGCCCTGCAGGATGCGAA +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVACGNR*SPAGCE
Trigger: TTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAATGCATCCCCAGTGTaGGGTCTGACAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLNASPV*GLTVAF
Trigger: GAAAGCCACTGTCAGACCCCACACTGGGGATGCATT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGACTCTTATAAACCCCTaGGGACCAGCCCTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSATLINP*GPALKK
Trigger: CTTCTTAAGGGCTGGTCCCCAGGGGTTTATAAGAGT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGCTCAGGGGCCCAGCTaGGAGCCACCTGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSAQGPS*EPPALF
Trigger: GAATAGAGCAGGTGGCTCCCAGCTGGGCCCCTGAGC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGAGGAGAGGGAAATCTTaGGCTTTAGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRRRGKS*ALGFLC
Trigger: ACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGTGCACAGTTGCCTGTaGAAGGAATATGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRVHSCL*KEYEVG
Trigger: TCCAACTTCATATTCCTTCCACAGGCAACTGTGCAC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGAGGGCATCCCTGGGTaGCCGAGCCCATCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAEGIPG*PSPSGP
Trigger: TGGGCCTGATGGGCTCGGCCACCCAGGGATGCCCTC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ACACTCCCTGTGGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCAACACACTTAGGATGCTaGAACTCTCCACATGCACAC +
Preference number: 4 (lower is better)
Translates to: TLPVVPSHKEPPASVSPPTHLGC*NSPHAH
Trigger: GTGTGCATGTGGAGAGTTTCAGCATCCTAAGTGTGT...TGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCACAGGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLIGLGG*CQDVVH
Trigger: ATGAACAACATCCTGACATCAGCCACCGAGCCCTAT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCGGAAAGGGAGTTGGTaGAGGTGGTCGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSRKGSW*RWSGVR
Trigger: TCTCACCCCCGACCACCTTCACCAACTCCCTTTCCG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAGGCGGGGAAGAGGCTaGGGTGGGCGGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLRRGRG*GGRAVA
Trigger: CGCCACTGCCCGCCCACCTCAGCCTCTTCCCCGCCT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGGGAGCGGATGCTGCTaGATTCACTGTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSGSGCC*IHCHLP
Trigger: GGGGAGGTGACAGTGAATTCAGCAGCATCCGCTCCC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCCCCAGTGTGGGGTCTaGCAGTGGCTTTCACAACCC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCPQCGV*QWLSQP
Trigger: GGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGTGGTAAGGCTGGGATaGGAAATGTCTTGGAATCAA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAVVRLG*EMSWNQ
Trigger: TTGATTCCAAGACATTTCTCATCCCAGCCTTACCAC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGCTTTGCTTGTTCCATaGAGATGGATGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLALLVP*RWMGQL
Trigger: CAGCTGTCCCATCCATCTTCATGGAACAAGCAAAGC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGG +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRLLSAT*TCLLMW
Trigger: CCACATCAATAGGCAAGTTCACGTAGCAGATAAAAG...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAGGGGAGGAGAAATTTaGATTGGGGGCAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLRGGEI*IGGKVG
Trigger: TCCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTGTTGGAGCAGTGGCTaGGAGCCCTCAAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQECWSSG*EPSRIG
Trigger: TCCTATCCTTGAGGGCTCTCAGCCACTGCTCCAACA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGCAGAGTGGGTTATCATaGCATTCATTGCCACACAAC +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAQSGLS*HSLPHN
Trigger: GTTGTGTGGCAATGAATGTCATGATAACCCACTCTG...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTACAAAGCCAATGAATaGGTCCTCCCATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLYKANE*VLPWCG
Trigger: GCCACACCATGGGAGGACTCATTCATTGGCTTTGTA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGATGGGCGAACACACACATTaGAAATGCTGCTACATCCAC +
Preference number: 4 (lower is better)
Translates to: LPTRSRRHLCPRHGWSGMGEHTH*KCCYIH
Trigger: GTGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCC...CATCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGCGACACCACCTTGGTaGTGGGCGTCTGTACCCACA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCATPPW*WASVPT
Trigger: TGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGCGACACCACCTTGGTaGTGGGCGTCTGTACCCACA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSATPPW*WASVPT
Trigger: TGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTTCCGTGGAGAGCAGCTaGTCGTCGGACAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSVESS*SSDRMR
Trigger: CCGCATCCTGTCCGACGAGCAGCTGCTCTCCACGGA...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGCATGACGCTTGGCTaGCGTCTGGCTCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGMTLG*RLALAQ
Trigger: CTGGGCCAGAGCCAGACGGCAGCCAAGCGTCATGCC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCTTCTGTCTAGGTCCTaGCGGAGGTGCATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVLLSRS*RRCMWE
Trigger: TTCCCACATGCACCTCCGGCAGGACCTAGACAGAAG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGAGGCCGTCACACCATaGCAACCCCCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGEAVTP*QPPGWR
Trigger: CCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGTGGACTCTCCATTCTTaGTTCACAAGCCTTCACCGG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLWTLHS*FTSLHR
Trigger: CCGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCA...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTGTCGTAGGAGACCTTaGCGAAGACGCCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSCRRRP*RRRRPR
Trigger: TCGTGGCCGGCGTCTTCGCCAAGGTCTCCTACGACA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTACACCACCTTGGTGCTaGGCGTCTGTACCCACACCG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCTPPWC*ASVPTP
Trigger: CGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCCGGCGACACCACCTTaGTGCTGGGCGTCTGTACCC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGPATPP*CWASVP
Trigger: GGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCAGTGCAGGCGCTCCGTaGAGAGCAGCTGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPASAGAP*RAAARR
Trigger: CCGACGAGCAGCTGCTCTCCACGGAGCGCCTGCACT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCTGTGCGAGATGGCCCTaGACAGCGACTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSCARWP*TATARE
Trigger: TTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACA...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCGTCCGTGTGCGAGATaGCCCTGGACAGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSRPCAR*PWTATA
Trigger: AGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCAAAGGCATGACGCTTaGCTGCCGTCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCQRHDA*LPSGSG
Trigger: GCCAGAGCCAGACGGCAGCCAAGCGTCATGCCTTTG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCGQPTD*TRWPLQ
Trigger: TTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAAAGGGATGATGCTGTaGGGACCTGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEKGMML*GPAQLA
Trigger: GGCTAACTGGGCAGGTCCCCACAGCATCATCCCTTT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGTTTCCTGTTCCTGTTaGGAGGCACACCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVVSCSC*EAHPAE
Trigger: CTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAAC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAGAGAGGGTAGTCCCTaGCCTTCCAGCCGCACGACT +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSREGSP*PSSRTT
Trigger: AGTCGTGCGGCTGGAAGGCCAGGGACTACCCTCTCT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGAGAGGGTAGTCCCTaGCCTTCCAGCCGCACGACT +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCREGSP*PSSRTT
Trigger: AGTCGTGCGGCTGGAAGGCCAGGGACTACCCTCTCT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGCTCAGGGGCCCAGCTaGGAGCCACCTGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSAQGPS*EPPALF
Trigger: GAATAGAGCAGGTGGCTCCCAGCTGGGCCCCTGAGC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGTGCACAGTTGCCTGTaGAAGGAATATGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAVHSCL*KEYEVG
Trigger: TCCAACTTCATATTCCTTCCACAGGCAACTGTGCAC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGTACGAGGGCATCCCTaGGTGGCCGAGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAVRGHP*VAEPIR
Trigger: CCTGATGGGCTCGGCCACCCAGGGATGCCCTCGTAC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGGGTCACTGCAGGGTaGGCAGCAAAGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGVTAG*AAKLSR
Trigger: CCTGCTCAACTTTGCTGCCCACCCTGCAGTGACCCC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTTGGAGGCACTGGGATaGGAGTGCATCTTGCTCATG +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQELEALG*ECILLM
Trigger: CATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGCCCAGGGTGGCGTATaGGTTATTGGAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSAQGGV*VIGGTG
Trigger: CCCAGTGCCTCCAATAACTCATACGCCACCCTGGGC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAGGAGCACAGCCCGCTaGAAGGACAGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRRSTAR*KDRPRV
Trigger: GACCCTGGGCCTGTCCTTTCAGCGGGCTGTGCTCCT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGCCTGCACAAAGGGATaGTGCTGTGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAACTKG*CCGDLP
Trigger: GGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGGGAGCGGATGCTGCTaGATTCACTGTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPGSGCC*IHCHLP
Trigger: GGGGAGGTGACAGTGAATTCAGCAGCATCCGCTCCC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCCCCAGTGTGGGGTCTaGCAGTGGCTTTCACAACCC +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSPQCGV*QWLSQP
Trigger: GGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGGTGCTGAGAAGCTTTaGCACTGGAGATGGGATCAG +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEGAEKL*HWRWDQ
Trigger: CTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCACC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGGGAAACTGAGGCACTaGGTGGGGAACATGACTCCC +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSGKLRH*VGNMTP
Trigger: GGGAGTCATGTTCCCCACTCAGTGCCTCAGTTTCCC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTACAGATGGGGAAACTaGGGCACTGAGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEYRWGN*GTEWGT
Trigger: TGTTCCCCACTCAGTGCCTCAGTTTCCCCATCTGTA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGGTGCTGGCAGGGAATaGAAGCCCTACAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEGAGRE*KPYSVR
Trigger: TCTTACACTGTAGGGCTTTCATTCCCTGCCAGCACC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGCTGTCCAGGACATCTaGGGACATCGCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWAVQDI*GHRCGA
Trigger: TGCCCCACAGCGATGTCCTCAGATGTCCTGGACAGC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGATGGCACACAGTTGGTaGCCTATTGAATGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLMAHSW*PIEWLG
Trigger: GCCTAACCATTCAATAGGTCACCAACTGTGTGCCAT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGCCAGCTCCCTCTCTaGAATTGGAACCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCSQLPL*NWNRLP
Trigger: AGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAGCCAGCTCCCTCTCTaGAATTGGAACCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSSQLPL*NWNRLP
Trigger: AGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGTGCATCTTGCTCATaGGGTAGCGGTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCSASCS*GSGPAR
Trigger: CCGTGCTGGACCGCTACCGCATGAGCAAGATGCACT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGGCCAGCACCCCATTaGTACTCCCCTCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGPAPH*YSPLRR
Trigger: CCTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPEAWRE*GDDRVS
Trigger: AGACACCCGATCATCTCCGCACTCCCTCCAGGCCTC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTATCATGACATTCATTaGCACACAACAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRYHDIH*HTTACE
Trigger: TTCACAGGCTGTTGTGTGGCAATGAATGTCATGATA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGATGTTCATCTCCCGTaGAGGGCGGTGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPDVHLP*RAVGLV
Trigger: GACAAGGCCCACCGCCCTCCACGGGAGATGAACATC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGCCCTGGAGTCTGCTTaGCCGTACGCACAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPALESA*PYAQEC
Trigger: ACACTCCTGTGCGTACGGCCAAGCAGACTCCAGGGC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCATGGGTGGAGTGGGAGATGAGATGAAGTTATaGAGATCAGGTCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: PFPQGAAGICVPAMGGVGDEMKL*RSGPPL
Trigger: AAGTGGAGGACCTGATCTCCATAACTTCATCTCATC...TCCCACTCCACCCATGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGGGCTCCGTGGACGCTaGGCAGCAGGTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLGLRGR*AAGPGT
Trigger: AGTCCCTGGACCTGCTGCCCAGCGTCCACGGAGCCC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGGGCTCCGTGGACGCTaGGCAGCAGGTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGGLRGR*AAGPGT
Trigger: AGTCCCTGGACCTGCTGCCCAGCGTCCACGGAGCCC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTGGTGCACTGGCGCTaGTCCAGCTTCTCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGLVHWR*SSFSWR
Trigger: GCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCATGCTGAACTCATCTaGCAGGCCCCGATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWHAELI*QAPIRG
Trigger: TCCCCGGATCGGGGCCTGCCAGATGAGTTCAGCATG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGACAGCAGCGGGTCCTaGGAGTGCAGGCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGDSSGS*ECRRSV
Trigger: CACGGAGCGCCTGCACTCCCAGGACCCGCTGCTGTC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGTGTGCGAGATGGCCCTaGACAGCGACTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWCARWP*TATARE
Trigger: TTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACA...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCAAAGGCATGACGCTTaGCTGCCGTCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPQRHDA*LPSGSG
Trigger: GCCAGAGCCAGACGGCAGCCAAGCGTCATGCCTTTG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLAESPG*GEGGAG
Trigger: TCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGCTGAGTCCCCCGGATaGGGAGAAGGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIAESPG*GEGGAG
Trigger: TCCCGCGCCTCCTTCTCCCCATCCGGGGGACTCAGC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCCACCCTGGCTCTCTaGCCACCGCAGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPTLAL*PPQVPP
Trigger: AGGAGGCACCTGCGGTGGCCAGAGAGCCAGGGTGGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCTCATCCTCCTTGTCTaGGGGCTGAAAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVLILLV*GLKSCS
Trigger: AGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATGAG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGACTCTTATAAACCCCTaGGGACCAGCCCTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLTLINP*GPALKK
Trigger: CTTCTTAAGGGCTGGTCCCCAGGGGTTTATAAGAGT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGACTTGCCTATTGATGTaGCTTTGCTTGTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRTCLLM*LCLFHE
Trigger: TTCATGGAACAAGCAAAGCCACATCAATAGGCAAGT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAACTTCATGCCCTTATaGGCCAACCTCCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLNFMPL*ANLQTF
Trigger: AAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGACAAAGGTACTAGGATaGGATGAGTGCCCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLTKVLG*DECPFL
Trigger: TAGGAAGGGGCACTCATCCCATCCTAGTACCTTTGT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGGGGTCACTGCAGGGTaGGCAGCAAAGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWGVTAG*AAKLSR
Trigger: CCTGCTCAACTTTGCTGCCCACCCTGCAGTGACCCC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp CCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTaGGGAGGCACACCCTGCAGAGGGGAGAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: PPKIQGDGFLFL*GGTPCRGEKEM
Trigger: CATCTCCTTCTCCCCTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATAGACGCCGGCCACGATaGCGAAGGCGATCACCCCGC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDRRRPR*RRRSPR
Trigger: GCGGGGTGATCGCCTTCGTCATCGTGGCCGGCGTCT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGCCCAGGGTGGCGTATaGGTTATTGGAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAAQGGV*VIGGTG
Trigger: CCCAGTGCCTCCAATAACTCATACGCCACCCTGGGC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGGAGCACAGCCCGCTaGAAGGACAGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRSTAR*KDRPRV
Trigger: GACCCTGGGCCTGTCCTTTCAGCGGGCTGTGCTCCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGCCTGCACAAAGGGATaGTGCTGTGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRACTKG*CCGDLP
Trigger: GGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGCTTTGCTTGTTCCATaGAGATGGATGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEALLVP*RWMGQL
Trigger: CAGCTGTCCCATCCATCTTCATGGAACAAGCAAAGC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGAGAGATGTGCAAAAATaGATAAAACAAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRRDVQK*IKQGEG
Trigger: TCCCTCTCCTTGTTTTATTCATTTTTGCACATCTCT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGCCTGTGGAAGGAATATaGAGTTGGAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEPVEGI*SWRLVT
Trigger: TGTCACCAGCCTCCAACTTCATATTCCTTCCACAGG...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGCTTCTGGAGTCCGAGTaGTTGGCAGCCCTTTCATTT +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPELLESE*LAALSF
Trigger: AAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAG...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGCATGAGGCTTACATATaGGTAACGAAGAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAHEAYI*VTKKLQ
Trigger: TTGCAGTTTCTTCGTTACTCATATGTAAGCCTCATG...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGGGTTGGTCTTTACTaGAGACTCGTAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGVGLY*RLVGWG
Trigger: CCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAGCGGGTCCTGGGAGTaGAGGCGCTCCGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLSGSWE*RRSVES
Trigger: GCTCTCCACGGAGCGCCTGCACTCCCAGGACCCGCT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCTTCTGTCTAGGTCCTaGCGGAGGTGCATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCLLSRS*RRCMWE
Trigger: TTCCCACATGCACCTCCGGCAGGACCTAGACAGAAG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGCACGACTCCAGGAATaGATCCCCAGTGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSARLQE*IPSVGS
Trigger: AGACCCCACACTGGGGATGCATTCCTGGAGTCGTGC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTATCATGACATTCATTaGCACACAACAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAYHDIH*HTTACE
Trigger: TTCACAGGCTGTTGTGTGGCAATGAATGTCATGATA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTAGGATGGGATGAGTaGCCCTTCCTAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLGWDE*PFLAAQ
Trigger: CTGGGCTGCTAGGAAGGGGCACTCATCCCATCCTAG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTGTCCCAGACAAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATGGCGTTTGTCGTAGGAGACCTTaGCGAAGACGCCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LSQTSLWPPHHLLISDGVCRRRP*RRRRPR
Trigger: TCGTGGCCGGCGTCTTCGCCAAGGTCTCCTACGACA...AACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTTGTCTGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTCAGCCAGAGCCCTGTaGATGTTCATCTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCSARAL*MFISRG
Trigger: TCCACGGGAGATGAACATCCACAGGGCTCTGGCTGA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCACACCACCTTGGTGCTaGGCGTCTGTACCCACACCG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGTPPWC*ASVPTP
Trigger: CGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCATCCGTGGCTTCTCTaGAGTCTGCTTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPHPWLL*SLLGRT
Trigger: CGTACGGCCAAGCAGACTCCAGAGAAGCCACGGATG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGAGATGAATACTTGCTaGGGTTGGTCTTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLEMNTC*GWSLLQ
Trigger: CTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGCGGGGTCGTTCCCTTaGCAACGGCTTCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAAGSFP*QRLLLG
Trigger: TCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGGTCCAGCACGGGTGTaGACACAAAGACGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSGPARV*TQRRPC
Trigger: ACACGGACGTCTTTGTGTCCACACCCGTGCTGGACC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGGGGGTATGGCTTTTTaGGCAAAGGTGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAGGMAF*AKVAHP
Trigger: GGGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGTCAGCCCACTGATTaGACCCGCTGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGQPTD*TRWPLQ
Trigger: TTGAAGGGGCCAGCGGGTCCAATCAGTGGGCTGACC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGGCCCAGGGTCCTTATaGGCGGGCAGTCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRGPGSL*AGSQLE
Trigger: TTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTACCGCAGGTGCCTCCTaGGAGCAGAGCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGTAGAS*EQSRGG
Trigger: TCCACCCCTGCTCTGCTCCCAGGAGGCACCTGCGGT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAAAGGGATGATGCTGTaGGGACCTGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCKGMML*GPAQLA
Trigger: GGCTAACTGGGCAGGTCCCCACAGCATCATCCCTTT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGAGGTGGGCGGGCAGTaGCGGTCCCCCAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMEVGGQ*RSPNRA
Trigger: AGCTCTGTTGGGGGACCGCCACTGCCCGCCCACCTC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCCCCACCAGGCTCTCTaGTCTTGGGGGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGPHQAL*SWGSGC
Trigger: GCATCCGCTCCCCCAAGACCAGAGAGCCTGGTGGGG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCCCCACCAGGCTCTCTaGTCTTGGGGGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLPHQAL*SWGSGC
Trigger: GCATCCGCTCCCCCAAGACCAGAGAGCCTGGTGGGG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGGAAAAGTGTCACCCTaGGGGCTGGAGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCGKVSP*GLENLV
Trigger: CACCAAGTTCTCCAGCCCCCAGGGTGACACTTTTCC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTTGGCTCCGTGCACTaGGGTATCAACTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLGSVH*GINSQG
Trigger: CCCCTGTGAGTTGATACCCCAGTGCACGGAGCCAAG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGCAGGGATGTTGGCATaGATATTCCTCCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEAGMLA*IFLHAW
Trigger: CCAAGCATGGAGGAATATCCATGCCAACATCCCTGC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCAGGGCAGGCACCTTCTaGAGTCCGAGTGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSRAGTF*SPSDWQ
Trigger: CTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCCT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGGGGAGAGCAGGTGCTaGCAGGGAATGAAAGCCCTA +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSGESRC*QGMKAL
Trigger: TAGGGCTTTCATTCCCTGCCAGCACCTGCTCTCCCC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCATGTGTGCAGCTCAGTaGAGGTGGGGAGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAMCAAQ*RWGGTG
Trigger: CCCCGTTCCTCCCCACCTCCACTGAGCTGCACACAT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGTGGGGCAGGCATTGTaGGATGTGTGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSVGQAL*DVCSSV
Trigger: CACTGAGCTGCACACATCCCACAATGCCTGCCCCAC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGTGGGGCAGGCATTGTaGGATGTGTGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWVGQAL*DVCSSV
Trigger: CACTGAGCTGCACACATCCCACAATGCCTGCCCCAC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGAGGGCATCCCTGGGTaGCCGAGCCCATCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLEGIPG*PSPSGP
Trigger: TGGGCCTGATGGGCTCGGCCACCCAGGGATGCCCTC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGTACGAGGGCATCCCTaGGTGGCCGAGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGVRGHP*VAEPIR
Trigger: CCTGATGGGCTCGGCCACCCAGGGATGCCCTCGTAC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGGACCGTATCCAAATaGAAACTCCAAACTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSARTVSK*KLQTQN
Trigger: ATTCTGAGTTTGGAGTTTCCATTTGGATACGGTCCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGTCCTCCCATGGTGTaGCATTCAGGGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCSPPMV*HSGVTA
Trigger: TGCAGTGACCCCTGAATGCCACACCATGGGAGGACT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGTCGTAGGGCATGCTaGACTCATCTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGRRAC*THLAGP
Trigger: GGGGCCTGCCAGATGAGTTCAGCATGCCCTACGACC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTTGGAGGCACTGGGATaGGAGTGCATCTTGCTCATG +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSLEALG*ECILLM
Trigger: CATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGACAGAACCTGCAGCTaGGTCCCCCGGATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGDRTCS*VPRMGR
Trigger: TCTCCCCATCCGGGGGACTCAGCTGCAGGTTCTGTC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGATCCGGTCAGCCCACTaGTTGGACCCGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLIRSAH*LDPLAP
Trigger: AGGGGCCAGCGGGTCCAATCAGTGGGCTGACCGGAT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEAVLDE*MRPSSL
Trigger: TAGGCTACTCGGTCTCATTCATTCATCTAGAACCGC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAGGAGCACAGCCCGCTaGAAGGACAGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLRSTAR*KDRPRV
Trigger: GACCCTGGGCCTGTCCTTTCAGCGGGCTGTGCTCCT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACCAATAGCCTGGAGTTaGTTCCCCCAGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRPIAWS*FPQPQP
Trigger: GGGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGAGCAGAAGAAATCCTTaGAAAGAAGTAAGCATTGCA +
Preference number: 4 (lower is better)
Translates to: IPGWPSPSGPPQALVRSASRRNP*KEVSIA
Trigger: TGCAATGCTTACTTCTTTTCAAGGATTTCTTCTGCT...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTTGTTGGAGCAGTGGCTaGGAGCCCTCAAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPCWSSG*EPSRIG
Trigger: TCCTATCCTTGAGGGCTCTCAGCCACTGCTCCAACA...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCAGTGCATCTTGCTCATaGGGTAGCGGTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPASASCS*GSGPAR
Trigger: CCGTGCTGGACCGCTACCGCATGAGCAAGATGCACT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGATGAGAGTGCATCTTaGTCATGCGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCDESAS*SCGSGP
Trigger: TGGACCGCTACCGCATGAGCAAGATGCACTCTCATC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCCACCGTGTTGTGTCTaGGTGAGGCAAAGGCATGAC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPPPCCV*VRQRHD
Trigger: GTCATGCCTTTGCCTCACGCAGACACAACACGGTGG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTCTGGCCACCGCAGGTaGCTCCTGGGAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLSGHRR*LLGAEQ
Trigger: CTGCTCTGCTCCCAGGAGGCACCTGCGGTGGCCAGA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCCAGCTGGGAGCCACCTaGTCTATTCAGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSQLGAT*SIQTHF
Trigger: GAAGTGAGTCTGAATAGAGCAGGTGGCTCCCAGCTG...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGCATTGTGGGATGTGTaGAGCTCAGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGALWDV*SSVEVG
Trigger: CCCCACCTCCACTGAGCTGCACACATCCCACAATGC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AAGCCACGCATGTCACCAGGACAAGCTGCCATGGAACCACCCCACTTATTCCTGCTTCCCATAATGCCCTaGAGTCTGCTTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: KPRMSPGQAAMEPPHLFLLPIMP*SLLGRT
Trigger: CGTACGGCCAAGCAGACTCCAGGGCATTATGGGAAG...CAGGAATAAGTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGACATGCGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp GGCCTCCACACCATCTTCTCATTTCAGATGGCGTTCCCTAGGCAACCTCTGTATTCTGTGTCCCCGCCATaGGTGGAGTGGGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLHTIFSFQMAFPRQPLYSVSPP*VEWDGC
Trigger: ACACCCATCCCACTCCACCCATGGCGGGGACACAGA...ATACAGAGGTTGCCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCTGCAGACTCGTAGGATaGGGGCAGGTGGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPACRLVG*GQVGQV
Trigger: AACTTGGCCCACCTGCCCCCATCCTACGAGTCTGCA...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGCGGGGTCGTTCCCTTaGCAACGGCTTCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRAGSFP*QRLLLG
Trigger: TCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGACAGGACCCTGTCCTaGGACATGGCCCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMDRTLS*DMARMG
Trigger: GCCCATCCGGGCCATGTCCCAGGACAGGGTCCTGTC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGAGTGCAGGCGCTCCGTaGAGAGCAGCTGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMSAGAP*RAAARR
Trigger: CCGACGAGCAGCTGCTCTCCACGGAGCGCCTGCACT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTGGCGTATGAGTTATTaGAGGCACTGGGATGAGAGT +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEWRMSY*RHWDES
Trigger: ACTCTCATCCCAGTGCCTCCAATAACTCATACGCCA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCTTTTTGGGCAAAGGTaGCCCACCCCCACTTCCTAC +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWLFGQR*PTPTSY
Trigger: GTAGGAAGTGGGGGTGGGCCACCTTTGCCCAAAAAG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTCAGCTGGAAGGGGGTaGAGTTCCCACCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGSAGRG*SSHQWG
Trigger: TCCCCATTGGTGGGAACTCCACCCCCTTCCAGCTGA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGACCGCAGGTGCCTCCTaGGAGCAGAGCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMTAGAS*EQSRGG
Trigger: TCCACCCCTGCTCTGCTCCCAGGAGGCACCTGCGGT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCCCTAGGCCAGTCGCCTaGAGGACCTTTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSPRPVA*RTFVCF
Trigger: AAAGCAAACAAAGGTCCTCCAGGCGACTGGCCTAGG...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACC +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVWSPSD*QPFHFT
Trigger: GGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAGACAAAGCCAGGGCTaGAAGCTGTGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSRQSQG*KLCLQS
Trigger: GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGTACGAGGGCATCCCTaGGTGGCCGAGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMVRGHP*VAEPIR
Trigger: CCTGATGGGCTCGGCCACCCAGGGATGCCCTCGTAC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGAACTTCATGCCCTTATaGGCCAACCTCCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPENFMPL*ANLQTF
Trigger: AAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTT...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGTCCTCCCATGGTGTaGCATTCAGGGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSPPMV*HSGVTA
Trigger: TGCAGTGACCCCTGAATGCCACACCATGGGAGGACT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGATTGATGATCACCCTTaGTGTGTCCTCTTCCTAATG +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLIDDHP*CVLFLM
Trigger: CATTAGGAAGAGGACACACCAAGGGTGATCATCAAT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441885.8
3UTR CAA 72 bp CCAGACCTTTCTCTCCAGCCAGCTCCCTCTCTGAAATaGGAACCGCCTCCCTCCAGCTATAAGGACCGTATC +
Preference number: 4 (lower is better)
Translates to: PDLSLQPAPSLK*EPPPSSYKDRI
Trigger: GATACGGTCCTTATAGCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCTGGAGAGAAAGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTAAAGCAGCTCAGCAGAAACTCTAGGTTAGCTTTCATCTTGAGGCTTGAAGGTAGACGCCGGCCACGATaGCGAAGGCGATCACCCCGC +
Preference number: 4 (lower is better)
Translates to: VKQLSRNSRLAFILRLEGRRRPR*RRRSPR
Trigger: GCGGGGTGATCGCCTTCGTCATCGTGGCCGGCGTCT...ACCTTCAAGCCTCAAGATGAAAGCTAACCTAGAGTTTCTGCTGAGCTGCTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCGTGAGGCAAAGGCATaGCGCTTGGCTGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLREAKA*RLAAVW
Trigger: CCAGACGGCAGCCAAGCGTCATGCCTTTGCCTCACG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCGTGTTGTGTCTGCGTaGGGCAAAGGCATGACGCTT +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPARVVSA*GKGMTL
Trigger: AAGCGTCATGCCTTTGCCTCACGCAGACACAACACG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCTCCTCACTCCCCACTaGTTCTTCTGGAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALLTPH*FFWRSK
Trigger: CTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGGAG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCGGAAAGGGAGTTGGTaGAGGTGGTCGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRKGSW*RWSGVR
Trigger: TCTCACCCCCGACCACCTTCACCAACTCCCTTTCCG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGGTCTTTGTCCCTTTaGTCCAGAGGAGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRSLSL*SRGGTD
Trigger: ATCCGTGCCTCCTCTGGATCAAAGGGACAAAGACCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCCAATAGCCTGGAGTTaGTTCCCCCAGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGPIAWS*FPQPQP
Trigger: GGGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCACTGCTGTTGGATCTaGCTGTTTTTAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVHCCWI*LFLGSH
Trigger: GTGTGATCCTAAAAACAGTCAGATCCAACAGCAGTG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAGGGGAGGAGAAATTTaGATTGGGGGCAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSRGGEI*IGGKVG
Trigger: TCCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCCTGGCCTGGAAATCTaGGGTTTTCTGGAAATCAGG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCPGLEI*GFLEIR
Trigger: CCTGATTTCCAGAAAACCTCAGATTTCCAGGCCAGG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGATGAGAGGAAGGAATaGGTGACCTGGCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCDERKE*VTWPGN
Trigger: ATTTCCAGGCCAGGTCACTCATTCCTTCCTCTCATC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTGGCAGGAACCAAACTaGCTATCACAGGCCATGACA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCWQEPN*LSQAMT
Trigger: TGTCATGGCCTGTGATAGTCAGTTTGGTTCCTGCCA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCCTGTGGAAGGAATATaGAGTTGGAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSPVEGI*SWRLVT
Trigger: TGTCACCAGCCTCCAACTTCATATTCCTTCCACAGG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCCTTCTGGAGTCCGAGTaGTTGGCAGCCCTTTCATTT +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSLLESE*LAALSF
Trigger: AAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAG...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCAGAGTGGGTTATCATaGCATTCATTGCCACACAAC +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVQSGLS*HSLPHN
Trigger: GTTGTGTGGCAATGAATGTCATGATAACCCACTCTG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAGGACGGTAGTGTCATaGCGAAGGGCTACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSRTVVS*RRATKV
Trigger: TACCTTTGTAGCCCTTCGTCATGACACTACCGTCCT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTACAAAGCCAATGAATaGGTCCTCCCATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCYKANE*VLPWCG
Trigger: GCCACACCATGGGAGGACTCATTCATTGGCTTTGTA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCTCTCGTGGCGCTTCTTaGAGCAGAAGCGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPASRGAS*SRSGSS
Trigger: GCTACTACCGCTTCTGCTGCAAGAAGCGCCACGAGA...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGCTCTGGTAGTTGGTaGACTGGCGCTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGGSGSW*TGAGPA
Trigger: AGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAGTGCATCTTGCTCATaGGGTAGCGGTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRSASCS*GSGPAR
Trigger: CCGTGCTGGACCGCTACCGCATGAGCAAGATGCACT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGATGAGCGGAGAGGATaGAGGACAACCACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWDERRG*RTTTSH
Trigger: ATGAGAGGTGGTTGTCCTGCATCCTCTCCGCTCATC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTACCAGGTACCCCAGTaGCTGCACAAAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSYQVPQ*LHKGMM
Trigger: CATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAAGGACACAGTCCATTaGTTTCTCTGTGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEKDTVH*FLCGLW
Trigger: CCACAAACCACAGAGAAAGCAATGGACTGTGTCCTT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCAAGCCCTTGGCTCCGTaGACTGGGGTATCAACTCAC +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAKPLAP*TGVSTH
Trigger: GTGAGTTGATACCCCAGTGCACGGAGCCAAGGGCTT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCTTACCTTGGGTCAAGTaGACAGTTGCCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSLPWVK*TVACGR
Trigger: CCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAA...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTATGTGGGAGGTAACATaGCAGCTCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPMWEVT*QLFSGQ
Trigger: CTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACAT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGATGTGGGAGGTAACATaGCAGCTCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWMWEVT*QLFSGQ
Trigger: CTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACAT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACTAGGATGGGATGAGTaGCCCTTCCTAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRLGWDE*PFLAAQ
Trigger: CTGGGCTGCTAGGAAGGGGCACTCATCCCATCCTAG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGCCCTGGAGTCTGCTTaGCCGTACGCACAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLALESA*PYAQEC
Trigger: ACACTCCTGTGCGTACGGCCAAGCAGACTCCAGGGC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTGTCAGAAGCCACGCATGTCACCAGGACAAGCTGCCATGGAACCACCCCACTCTTCTCATTTCAGATaGCGTTCCCTAGGCAACCTC +
Preference number: 4 (lower is better)
Translates to: SCQKPRMSPGQAAMEPPHSSHFR*RSLGNL
Trigger: GAGGTTGCCTAGGGAACGCCATCTGAAATGAGAAGA...GTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGACATGCGTGGCTTCTGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp AACACACACATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCCCACCACACTCCCTGTaGTCCCTTCCCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NTHIANAATSTGSFPPHSPPHSL*SLPTRS
Trigger: GCTCCTTGTGGGAAGGGACCACAGGGAGTGTGGTGG...GGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCCGGGCTCTGGTAGTTaGTGCACTGGCGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCPGSGS*CTGAGP
Trigger: TGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCCGGGCTCTGGTAGTTaGTGCACTGGCGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDPGSGS*CTGAGP
Trigger: TGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTTCTGTTGGGACATCTaGATGACATTGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSFCWDI*MTLRGR
Trigger: CCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTTCTGTTGGGACATCTaGATGACATTGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCFCWDI*MTLRGR
Trigger: CCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGCAACGGCTTCTGTTaGGACATCTGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGNGFC*DIWMTL
Trigger: CAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGGCAACGGCTTCTGTTaGGACATCTGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCGNGFC*DIWMTL
Trigger: CAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGCGGGGTCGTTCCCTTaGCAACGGCTTCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLAGSFP*QRLLLG
Trigger: TCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCGTCCGTGTGCGAGATaGCCCTGGACAGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDRPCAR*PWTATA
Trigger: AGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTCACTTCGGTCTTGCTaGCTGTGTAGCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSSLRSC*LCSRCG
Trigger: ACCACACCTGCTACACAGCCAGCAAGACCGAAGTGA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGCCCAGGGTCCTTATaGGCGGGCAGTCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGPGSL*AGSQLE
Trigger: TTCCAGCTGACTGCCCGCCCATAAGGACCCTGGGCC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACCTGAGTGGCAGTCATaGTCAGGTCTAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRPEWQS*SGLEAW
Trigger: CCAGGCCTCTAGACCTGACCATGACTGCCACTCAGG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAGAAGGCAGCCTGAGTaGCAGTCATGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRRQPE*QSWSGL
Trigger: TAGACCTGACCATGACTGCCACTCAGGCTGCCTTCT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAGAGAGGGTAGTCCCTaGCCTTCCAGCCGCACGACT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGREGSP*PSSRTT
Trigger: AGTCGTGCGGCTGGAAGGCCAGGGACTACCCTCTCT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCTGCCTTCCAAGGGATaGCCACAGATTAGACGATTC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCLPSKG*PQIRRF
Trigger: GAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCTGCATGTAGACACCTaGGAAGGGCATTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPLHVDT*EGHSQP
Trigger: TGGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGCCACCAGCCTGGTTaGGCTAGAAATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGHQPG*ARNHGI
Trigger: GATGCCATGATTTCTAGCCCAACCAGGCTGGTGGCC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCAGAGCAGGAGCTTCTaGGCTAACATCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGQSRSF*ANIRLG
Trigger: ACCCAGCCTGATGTTAGCCCAGAAGCTCCTGCTCTG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAAGGATAGGAGTCTTTaGCCAGAGCAGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSKDRSL*PEQELL
Trigger: CAGAAGCTCCTGCTCTGGCCAAAGACTCCTATCCTT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGCAGGGATGTTGGCATaGATATTCCTCCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSAGMLA*IFLHAW
Trigger: CCAAGCATGGAGGAATATCCATGCCAACATCCCTGC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGACAAAGCCAGGGCTaGAAGCTGTGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRQSQG*KLCLQS
Trigger: GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCACAAGAGGGCTTCCATaGCACACAGTTGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSTRGLP*HTVGDL
Trigger: TAGGTCACCAACTGTGTGCCATGGAAGCCCTCTTGT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCTCAGTGTCCAGACTTaGTCTTCAGGACACATATTC +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVLSVQT*SSGHIF
Trigger: GAATATGTGTCCTGAAGACCAAGTCTGGACACTGAG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTCCTCCAGTTGGAATaGAGCCTCAGTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLLQLE*SLSVQT
Trigger: AGTCTGGACACTGAGGCTCCATTCCAACTGGAGGAG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGGGGTCACTGCAGGGTaGGCAGCAAAGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLGVTAG*AAKLSR
Trigger: CCTGCTCAACTTTGCTGCCCACCCTGCAGTGACCCC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTGGAGGACGATCTaGCCGGCGTGTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGFWRTI*PACSLW
Trigger: CCAAAGAGAACACGCCGGTCAGATCGTCCTCCAAAA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPIGLGG*CQDVVH
Trigger: ATGAACAACATCCTGACATCAGCCACCGAGCCCTAT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCGGAAAGGGAGTTGGTaGAGGTGGTCGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCRKGSW*RWSGVR
Trigger: TCTCACCCCCGACCACCTTCACCAACTCCCTTTCCG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCAVLDE*MRPSSL
Trigger: TAGGCTACTCGGTCTCATTCATTCATCTAGAACCGC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCAGAAAACTCAAGGGTaGAATCCTCAGGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAQKTQG*NPQGQG
Trigger: TCCCTGGCCCTGAGGATTTCACCCTTGAGTTTTCTG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGAGGGAGTGCGGAGATaGTCGGGTGTCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTEGVRR*SGVWEG
Trigger: GCCCTCCCAGACACCCGATCATCTCCGCACTCCCTC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGTAGGAGTGATCTCTaGACTGAGCAGGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCSRSDL*TEQVDR
Trigger: TCTGTCTACCTGCTCAGTTCAGAGATCACTCCTACT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGTCCCCCAACAGAGCTaGGGACCATGGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLVPQQS*GPWSTR
Trigger: CCTGGTAGACCATGGTCCTCAGCTCTGTTGGGGGAC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCCCCAGTGTGGGGTCTaGCAGTGGCTTTCACAACCC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLPQCGV*QWLSQP
Trigger: GGGTTGTGAAAGCCACTGTCAGACCCCACACTGGGG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGTGCTGAGAAGCTTTaGCACTGGAGATGGGATCAG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGAEKL*HWRWDQ
Trigger: CTGATCCCATCTCCAGTGTCAAAGCTTCTCAGCACC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGATGGATGGGACAGCTaGATAAATGGGATACCTCTC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSDGWDS*INGIPL
Trigger: GAGAGGTATCCCATTTATTCAGCTGTCCCATCCATC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGATGGATGGGACAGCTaGATAAATGGGATACCTCTC +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSDGWDS*INGIPL
Trigger: GAGAGGTATCCCATTTATTCAGCTGTCCCATCCATC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGACTATCACAGGCCATaGCATCTCAAACCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWDYHRP*HLKPRA
Trigger: AGCTCTGGGTTTGAGATGTCATGGCCTGTGATAGTC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGGAAACTGAGGCACTaGGTGGGGAACATGACTCCC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGGKLRH*VGNMTP
Trigger: GGGAGTCATGTTCCCCACTCAGTGCCTCAGTTTCCC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTACAGATGGGGAAACTaGGGCACTGAGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGYRWGN*GTEWGT
Trigger: TGTTCCCCACTCAGTGCCTCAGTTTCCCCATCTGTA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGCTGTCCAGGACATCTaGGGACATCGCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDAVQDI*GHRCGA
Trigger: TGCCCCACAGCGATGTCCTCAGATGTCCTGGACAGC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCATGGCACACAGTTGGTaGCCTATTGAATGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSMAHSW*PIEWLG
Trigger: GCCTAACCATTCAATAGGTCACCAACTGTGTGCCAT...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGCTCTGGTAGTTGGTaGACTGGCGCTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGSGSW*TGAGPA
Trigger: AGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGCGACACCACCTTGGTaGTGGGCGTCTGTACCCACA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMATPPW*WASVPT
Trigger: TGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGCTTCTCTGGAGTCTaGTTGGCCGTACGCACAGGA +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGFSGV*LAVRTG
Trigger: TCCTGTGCGTACGGCCAAGCAGACTCCAGAGAAGCC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGGGGTTGGTCTTTACTaGAGACTCGTAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRGVGLY*RLVGWG
Trigger: CCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTACAAAGACGTCCGTGTaGGAGATGGCCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGTKTSV*EMALDS
Trigger: GCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGAGGCCTGGAGGGAGTaGGGAGATGATCGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCEAWRE*GDDRVS
Trigger: AGACACCCGATCATCTCCGCACTCCCTCCAGGCCTC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTGGGGGCTGAAAAGCTaGTCTCTAGAAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSWGLKS*SLETSV
Trigger: GACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCAGCTGGGAGCCACCTaGTCTATTCAGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGQLGAT*SIQTHF
Trigger: GAAGTGAGTCTGAATAGAGCAGGTGGCTCCCAGCTG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAAGCCCTTGGCTCCGTaGACTGGGGTATCAACTCAC +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRKPLAP*TGVSTH
Trigger: GTGAGTTGATACCCCAGTGCACGGAGCCAAGGGCTT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTTTCACAGTGTGCTATaGGGATTGGTCCCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSFHSVL*GLVPVV
Trigger: GACAACAGGGACCAATCCCCATAGCACACTGTGAAA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGGTGGGCCAAGTTCTaGAACGAGCGGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRWAKF*NEREKE
Trigger: CTCCTTCTCCCGCTCGTTCCAGAACTTGGCCCACCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGTGTGCGAGATGGCCCTaGACAGCGACTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMCARWP*TATARE
Trigger: TTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACA...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGTCCAGCACGGGTGTaGACACAAAGACGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGPARV*TQRRPC
Trigger: ACACGGACGTCTTTGTGTCCACACCCGTGCTGGACC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGCTCTGGCCCAGGGTaGCGTATGAGTTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGSGPG*RMSYWR
Trigger: CCTCCAATAACTCATACGCCACCCTGGGCCAGAGCC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGGGGTATGGCTTTTTaGGCAAAGGTGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGGMAF*AKVAHP
Trigger: GGGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGTDWTR*PLQTQA
Trigger: TGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTCATTATTGTGCTTATaGACACAGCAGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCSLLCL*TQQLPG
Trigger: GCCAGGGAGCTGCTGTGTCCATAAGCACAATAATGA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAAAGGGATGATGCTGTaGGGACCTGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRKGMML*GPAQLA
Trigger: GGCTAACTGGGCAGGTCCCCACAGCATCATCCCTTT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGGTTTATGTGTCTGTTaGGAGGAAAGCAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSGLCVC*EESREG
Trigger: ACCCTCTCTGCTTTCCTCCCAACAGACACATAAACC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATACGATTCAAAGGTGCTaGGCTCAGGGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDTIQRC*AQGPSW
Trigger: CCAGCTGGGCCCCTGAGCCCAGCACCTTTGAATCGT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCTGCATGTAGACACCTaGGAAGGGCATTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGLHVDT*EGHSQP
Trigger: TGGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCTGAGGGCAGAAGCCTaGTTAGGAGGTGAAGTAATT +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSLRAEA*LGGEVI
Trigger: AATTACTTCACCTCCTAACCAGGCTTCTGCCCTCAG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGGGCTAACATCAGGCTaGGTTGGGAGCTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGGLTSG*VGSFRG
Trigger: TCCCCTGAAGCTCCCAACCCAGCCTGATGTTAGCCC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAAGGATAGGAGTCTTTaGCCAGAGCAGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWKDRSL*PEQELL
Trigger: CAGAAGCTCCTGCTCTGGCCAAAGACTCCTATCCTT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQELQCKS*MKLQSS
Trigger: TGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAG...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGGGAGAGCAGGTGCTaGCAGGGAATGAAAGCCCTA +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGESRC*QGMKAL
Trigger: TAGGGCTTTCATTCCCTGCCAGCACCTGCTCTCCCC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATATGTGTGCAGCTCAGTaGAGGTGGGGAGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDMCAAQ*RWGGTG
Trigger: CCCCGTTCCTCCCCACCTCCACTGAGCTGCACACAT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCTCCTCCAGTTGGAATaGAGCCTCAGTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALLQLE*SLSVQT
Trigger: AGTCTGGACACTGAGGCTCCATTCCAACTGGAGGAG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGCCTCCTCCTCCAGTTaGAATGGAGCCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGASSSS*NGASVS
Trigger: GGACACTGAGGCTCCATTCCAACTGGAGGAGGAGGC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGCCTCCTCCTCCAGTTaGAATGGAGCCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIASSSS*NGASVS
Trigger: GGACACTGAGGCTCCATTCCAACTGGAGGAGGAGGC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp CACTCCCCACTGATTCTTCTGGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAG +
Preference number: 4 (lower is better)
Translates to: HSPLILLEEQER*LLVLGLSVLDQ
Trigger: CTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTCCAGAAGAATCAGTGGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp GATGGCAGGGATGTTGGCATGGATATTCCTCCATGCTaGGAGACTCAGGAGGCCCTCAAGTCTTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: DGRDVGMDIPPC*ETQEALKSLWT
Trigger: TGTCCACAAAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACATCCCTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCCTGTGGTCCAACAAAAGACAGAATTaGGGAGGAGTCCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: IANAATSTGSFPPHSLWSNKRQN*GGVHAP
Trigger: GGGGGCATGGACTCCTCCTCAATTCTGTCTTTTGTT...GGACCACAGGGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCTCCTCACTCCCCACTaGTTCTTCTGGAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGLLTPH*FFWRSK
Trigger: CTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGGAG...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCTCCTCACTCCCCACTaGTTCTTCTGGAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLLTPH*FFWRSK
Trigger: CTTGCTCCTCCAGAAGAATCAGTGGGGAGTGAGGAG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCACTGCTGTTGGATCTaGCTGTTTTTAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSHCCWI*LFLGSH
Trigger: GTGTGATCCTAAAAACAGTCAGATCCAACAGCAGTG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGTGGTAAGGCTGGGATaGGAAATGTCTTGGAATCAA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSVVRLG*EMSWNQ
Trigger: TTGATTCCAAGACATTTCTCATCCCAGCCTTACCAC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCGTGAACTTGCCTATTaGTGTGGCTTTGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRELAY*CGFACS
Trigger: GGAACAAGCAAAGCCACATCAATAGGCAAGTTCACG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCCCTGGCCTGGAAATCTaGGGTTTTCTGGAAATCAGG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGPGLEI*GFLEIR
Trigger: CCTGATTTCCAGAAAACCTCAGATTTCCAGGCCAGG...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGATACAGATGGGGAAACTaGGGCACTGAGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRYRWGN*GTEWGT
Trigger: TGTTCCCCACTCAGTGCCTCAGTTTCCCCATCTGTA...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCAGTTGGTGACCTATTaGATGGTTAGGCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCQLVTY*MVRPLN
Trigger: GTTTAAGGGCCTAACCATTCAATAGGTCACCAACTG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATAGCCAGCTCCCTCTCTaGAATTGGAACCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDSQLPL*NWNRLP
Trigger: AGGGAGGCGGTTCCAATTTCAGAGAGGGAGCTGGCT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATCCGTGGAGAGCAGCTaGTCGTCGGACAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTSVESS*SSDRMR
Trigger: CCGCATCCTGTCCGACGAGCAGCTGCTCTCCACGGA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGACAAAGACGTCCGTGTaGGAGATGGCCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLTKTSV*EMALDS
Trigger: GCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGATGAGAGTGCATCTTaGTCATGCGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRDESAS*SCGSGP
Trigger: TGGACCGCTACCGCATGAGCAAGATGCACTCTCATC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCACCGTGTTGTGTCTaGGTGAGGCAAAGGCATGAC +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPPCCV*VRQRHD
Trigger: GTCATGCCTTTGCCTCACGCAGACACAACACGGTGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCGGTCACTTCGGTCTTaGTGGCTGTGTAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIRSLRS*WLCSRC
Trigger: ACACCTGCTACACAGCCAGCAAGACCGAAGTGACCG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCGGTCACTTCGGTCTTaGTGGCTGTGTAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGRSLRS*WLCSRC
Trigger: ACACCTGCTACACAGCCAGCAAGACCGAAGTGACCG...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGAACAGGTGGAGCCCTaGAGGATGCGAATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGEQVEP*RMRMLS
Trigger: GCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGATACCAGGTACCCCAGTaGCTGCACAAAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRYQVPQ*LHKGMM
Trigger: CATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTA...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAAGGACACAGTCCATTaGTTTCTCTGTGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSKDTVH*FLCGLW
Trigger: CCACAAACCACAGAGAAAGCAATGGACTGTGTCCTT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGCAGGAGAGAACCTGTaGAGATTCCAGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSAGENL*RFQFIS
Trigger: AGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTCAGCCAGAGCCCTGTaGATGTTCATCTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGSARAL*MFISRG
Trigger: TCCACGGGAGATGAACATCCACAGGGCTCTGGCTGA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTTCCCATAATGCCCTaGAGTCTGCTTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNILPIMP*SLLGRT
Trigger: CGTACGGCCAAGCAGACTCCAGGGCATTATGGGAAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTCTCTGGAGTCTGCTTaGCCGTACGCACAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGSLESA*PYAQEC
Trigger: ACACTCCTGTGCGTACGGCCAAGCAGACTCCAGAGA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGAGATGAATACTTGCTaGGGTTGGTCTTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSEMNTC*GWSLLQ
Trigger: CTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGTCCAGCACGGGTGTaGACACAAAGACGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGPARV*TQRRPC
Trigger: ACACGGACGTCTTTGTGTCCACACCCGTGCTGGACC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGTTATTGGAGGCACTaGGATGAGAGTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSYWRH*DESASC
Trigger: GCAAGATGCACTCTCATCCCAGTGCCTCCAATAACT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTTTTTGGGCAAAGGTaGCCCACCCCCACTTCCTAC +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNILFGQR*PTPTSY
Trigger: GTAGGAAGTGGGGGTGGGCCACCTTTGCCCAAAAAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATACTGATTGGACCCGCTaGCCCCTTCAAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDTDWTR*PLQTQA
Trigger: TGCCTGGGTTTGAAGGGGCCAGCGGGTCCAATCAGT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGGAAGGGTCACTCAGTaGGGACCAGAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDGRVTQ*GPESSS
Trigger: GCTGGAACTCTCTGGTCCCCACTGAGTGACCCTTCC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGTCAGCTGGAAGGGGGTaGAGTTCCCACCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMSAGRG*SSHQWG
Trigger: TCCCCATTGGTGGGAACTCCACCCCCTTCCAGCTGA...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGGAAAAGTGTCACCCTaGGGGCTGGAGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGGKVSP*GLENLV
Trigger: CACCAAGTTCTCCAGCCCCCAGGGTGACACTTTTCC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGAAATCTGAGGTTTTCTaGAAATCAGGAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPEKSEVF*KSGVSG
Trigger: CCCAGAAACTCCTGATTTCCAGAAAACCTCAGATTT...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCTTGGCTCCGTGCACTaGGGTATCAACTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCLGSVH*GINSQG
Trigger: CCCCTGTGAGTTGATACCCCAGTGCACGGAGCCAAG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGGGCTAACATCAGGCTaGGTTGGGAGCTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLGLTSG*VGSFRG
Trigger: TCCCCTGAAGCTCCCAACCCAGCCTGATGTTAGCCC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGGCTAACATCAGGCTaGGTTGGGAGCTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGLTSG*VGSFRG
Trigger: TCCCCTGAAGCTCCCAACCCAGCCTGATGTTAGCCC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGAGGGCAGGCACCTTCTaGAGTCCGAGTGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMRAGTF*SPSDWQ
Trigger: CTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCCT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGTGGGGCAGGCATTGTaGGATGTGTGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDVGQAL*DVCSSV
Trigger: CACTGAGCTGCACACATCCCACAATGCCTGCCCCAC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGACACATATTCCAGAGTaGGTTATCATGACATTCATT +
Preference number: 4 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLTHIPE*VIMTFI
Trigger: AATGAATGTCATGATAACCCACTCTGGAATATGTGT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGCCTCCTCCTCCAGTTaGAATGGAGCCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCASSSS*NGASVS
Trigger: GGACACTGAGGCTCCATTCCAACTGGAGGAGGAGGC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGACAAAGGTACTAGGATaGGATGAGTGCCCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWTKVLG*DECPFL
Trigger: TAGGAAGGGGCACTCATCCCATCCTAGTACCTTTGT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTCCGTGGCTTCTCCTTaGTGTGTCCTCTTCCTAATG +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGSVASP*CVLFLM
Trigger: CATTAGGAAGAGGACACACCAAGGAGAAGCCACGGA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS-3UTR TCA 90 bp GGCCTCCACACCATCTTCTCATTTCAGATGGCGTTCCCTAGGCAACCTCTGTATCTAAAGTCACACCTGTaGCCTCCAGTAACTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLHTIFSFQMAFPRQPLYLKSHL*PPVTPV
Trigger: GACAGGAGTTACTGGAGGTCACAGGTGTGACTTTAG...ATACAGAGGTTGCCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGCCCAGGGTGGCGTATaGGTTATTGGAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTAQGGV*VIGGTG
Trigger: CCCAGTGCCTCCAATAACTCATACGCCACCCTGGGC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCGTGTTGTGTCTGCGTaGGGCAAAGGCATGACGCTT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCRVVSA*GKGMTL
Trigger: AAGCGTCATGCCTTTGCCTCACGCAGACACAACACG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCAGAAAACTCAAGGGTaGAATCCTCAGGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGQKTQG*NPQGQG
Trigger: TCCCTGGCCCTGAGGATTTCACCCTTGAGTTTTCTG...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGTGGAGAAGGCAGCCTaGGTGGCAGTCATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTVEKAA*VAVMVR
Trigger: CCTGACCATGACTGCCACTCAGGCTGCCTTCTCCAC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGTGGAGAAGGCAGCCTaGGTGGCAGTCATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEVEKAA*VAVMVR
Trigger: CCTGACCATGACTGCCACTCAGGCTGCCTTCTCCAC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAGGTCTTTGTCCCTTTaGTCCAGAGGAGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGRSLSL*SRGGTD
Trigger: ATCCGTGCCTCCTCTGGATCAAAGGGACAAAGACCT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGATGGAGAACTTGGTGCTaGGAAGCTTTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRWRTWC*EALTLE
Trigger: CTCCAGTGTCAAAGCTTCTCAGCACCAAGTTCTCCA...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGAGAGATGTGCAAAAATaGATAAAACAAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQERDVQK*IKQGEG
Trigger: TCCCTCTCCTTGTTTTATTCATTTTTGCACATCTCT...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGAGAGATGTGCAAAAATaGATAAAACAAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVHVGTGGALQDANVEPERDVQK*IKQGEG
Trigger: TCCCTCTCCTTGTTTTATTCATTTTTGCACATCTCT...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGATGAGAGGAAGGAATaGGTGACCTGGCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRDERKE*VTWPGN
Trigger: ATTTCCAGGCCAGGTCACTCATTCCTTCCTCTCATC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGTGCTGGCAGGGAATaGAAGCCCTACAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGGAGRE*KPYSVR
Trigger: TCTTACACTGTAGGGCTTTCATTCCCTGCCAGCACC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACTCTGCAGCTTGAAATaGATTTCCCAGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRLCSLK*ISQLPS
Trigger: TGAGGGCAGCTGGGAAATTCATTTCAAGCTGCAGAG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTCAGAGTGGGTTATCATaGCATTCATTGCCACACAAC +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPQSGLS*HSLPHN
Trigger: GTTGTGTGGCAATGAATGTCATGATAACCCACTCTG...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATTCTCGTGGCGCTTCTTaGAGCAGAAGCGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDSRGAS*SRSGSS
Trigger: GCTACTACCGCTTCTGCTGCAAGAAGCGCCACGAGA...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGGGTTGGTCTTTACTaGAGACTCGTAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGVGLY*RLVGWG
Trigger: CCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCGGTCACTTCGGTCTTaGTGGCTGTGTAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDRSLRS*WLCSRC
Trigger: ACACCTGCTACACAGCCAGCAAGACCGAAGTGACCG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGAACAGGTGGAGCCCTaGAGGATGCGAATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLEQVEP*RMRMLS
Trigger: GCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCTTCTGTCTAGGTCCTaGCGGAGGTGCATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLLLSRS*RRCMWE
Trigger: TTCCCACATGCACCTCCGGCAGGACCTAGACAGAAG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTGGGGGCTGAAAAGCTaGTCTCTAGAAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGWGLKS*SLETSV
Trigger: GACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGATGAGCGGAGAGGATaGAGGACAACCACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGDERRG*RTTTSH
Trigger: ATGAGAGGTGGTTGTCCTGCATCCTCTCCGCTCATC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCAGCTGGGAGCCACCTaGTCTATTCAGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLQLGAT*SIQTHF
Trigger: GAAGTGAGTCTGAATAGAGCAGGTGGCTCCCAGCTG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTAAAGCAGCTCAGCAGAAACTCTAGGTTAGCTTTCATCTTGAGGCTTGAAGGTGATGTTCATCTCCCGTaGAGGGCGGTGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VKQLSRNSRLAFILRLEGDVHLP*RAVGLV
Trigger: GACAAGGCCCACCGCCCTCCACGGGAGATGAACATC...ACCTTCAAGCCTCAAGATGAAAGCTAACCTAGAGTTTCTGCTGAGCTGCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCTTCCCATAATGCCCTaGAGTCTGCTTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMLPIMP*SLLGRT
Trigger: CGTACGGCCAAGCAGACTCCAGGGCATTATGGGAAG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGATGAGATGAAGTTATaGAGATCAGGTCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSDEMKL*RSGPPL
Trigger: AAGTGGAGGACCTGATCTCCATAACTTCATCTCATC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGATGAGATGAAGTTATaGAGATCAGGTCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSDEMKL*RSGPPL
Trigger: AAGTGGAGGACCTGATCTCCATAACTTCATCTCATC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACATGCTGAACTCATCTaGCAGGCCCCGATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTHAELI*QAPIRG
Trigger: TCCCCGGATCGGGGCCTGCCAGATGAGTTCAGCATG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTGGCGTATGAGTTATTaGAGGCACTGGGATGAGAGT +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGWRMSY*RHWDES
Trigger: ACTCTCATCCCAGTGCCTCCAATAACTCATACGCCA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCTGGCGTATGAGTTATTaGAGGCACTGGGATGAGAGT +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAWRMSY*RHWDES
Trigger: ACTCTCATCCCAGTGCCTCCAATAACTCATACGCCA...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACAAAGGCATGACGCTTaGCTGCCGTCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEQRHDA*LPSGSG
Trigger: GCCAGAGCCAGACGGCAGCCAAGCGTCATGCCTTTG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTCACTTCGGTCTTGCTaGCTGTGTAGCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLSLRSC*LCSRCG
Trigger: ACCACACCTGCTACACAGCCAGCAAGACCGAAGTGA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCTTTTTGGGCAAAGGTaGCCCACCCCCACTTCCTAC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDLFGQR*PTPTSY
Trigger: GTAGGAAGTGGGGGTGGGCCACCTTTGCCCAAAAAG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGTCAGGTCTAGAGGCCTaGAGGGAGTGCGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMSGLEA*RECGDD
Trigger: ATCATCTCCGCACTCCCTCCAGGCCTCTAGACCTGA...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGAAGGCAGCCTGAGTaGCAGTCATGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRRQPE*QSWSGL
Trigger: TAGACCTGACCATGACTGCCACTCAGGCTGCCTTCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTCATCCTCCTTGTCTaGGGGCTGAAAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNILILLV*GLKSCS
Trigger: AGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATGAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGTTTCCTGTTCCTGTTaGGAGGCACACCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCVSCSC*EAHPAE
Trigger: CTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAAC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAATGCATCCCCAGTGTaGGGTCTGACAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLNASPV*GLTVAF
Trigger: GAAAGCCACTGTCAGACCCCACACTGGGGATGCATT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGGCCACCAGCCTGGTTaGGCTAGAAATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLGHQPG*ARNHGI
Trigger: GATGCCATGATTTCTAGCCCAACCAGGCTGGTGGCC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAATTGGGGGCAAGGTTaGAACTTTCTAAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPNWGQG*NFLRGS
Trigger: ACTGCCTCTTAGAAAGTTCCAACCTTGCCCCCAATT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTAACATCAGGCTGGGTTaGGAGCTTCAGGGGACTTGC +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCNIRLG*ELQGTC
Trigger: GCAAGTCCCCTGAAGCTCCCAACCCAGCCTGATGTT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGAACATCAGGCTGGGTTaGGAGCTTCAGGGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMNIRLG*ELQGTC
Trigger: GCAAGTCCCCTGAAGCTCCCAACCCAGCCTGATGTT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTAGTGTGTTGGAGCAGTaGCTGAGAGCCCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGSVLEQ*LRALKD
Trigger: ATCCTTGAGGGCTCTCAGCCACTGCTCCAACACACT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAGTGTGTTGGAGCAGTaGCTGAGAGCCCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGSVLEQ*LRALKD
Trigger: ATCCTTGAGGGCTCTCAGCCACTGCTCCAACACACT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp GGCACACCCTGCAGAGGGGAGAAGGAGATGAGAGCTTaGGAACTCTTGAAATCAGTGAAAGGACACAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTPCRGEKEMRA*ELLKSVKGHSP
Trigger: TGGACTGTGTCCTTTCACTGATTTCAAGAGTTCCAAAGCTCTCATCTCCTTCTCCCCTCTGCAGGGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTTGGAGAACTTGGTGCTaGGAAGCTTTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGWRTWC*EALTLE
Trigger: CTCCAGTGTCAAAGCTTCTCAGCACCAAGTTCTCCA...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTCATCAACAACCCCTaGGAGAGACAGAAACCCTGT +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNILINNP*ERQKPC
Trigger: ACAGGGTTTCTGTCTCTCTCAGGGGTTGTTGATGAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCTCATCAACAACCCCTaGGAGAGACAGAAACCCTGT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGLINNP*ERQKPC
Trigger: ACAGGGTTTCTGTCTCTCTCAGGGGTTGTTGATGAG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGATTTAGGCTTCCTTTGTaGGCAGGAGGGAGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRFRLPL*AGGRLL
Trigger: TAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAA...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTTGGCAAAGCCTTTTTaGCACAGGAAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLAKPF*HRKAWS
Trigger: GCTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGATGAGAGGAAGGAATaGGTGACCTGGCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGDERKE*VTWPGN
Trigger: ATTTCCAGGCCAGGTCACTCATTCCTTCCTCTCATC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTGGCAGGAACCAAACTaGCTATCACAGGCCATGACA +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGWQEPN*LSQAMT
Trigger: TGTCATGGCCTGTGATAGTCAGTTTGGTTCCTGCCA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACAGATTCGGACAGGATaGCAGGAAATGTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRQIRTG*QEMYVG
Trigger: TCCCACATACATTTCCTGTCATCCTGTCCGAATCTG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCACAATGCGCTTTCTTaGAAATACTCCAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSHNALS*KYSRAK
Trigger: TTTTGCTCTGGAGTATTTTCAAGAAAGCGCATTGTG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTCTGCAGCTTGAAATaGATTTCCCAGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNILCSLK*ISQLPS
Trigger: TGAGGGCAGCTGGGAAATTCATTTCAAGCTGCAGAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGGACGGTAGTGTCATaGCGAAGGGCTACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRTVVS*RRATKV
Trigger: TACCTTTGTAGCCCTTCGTCATGACACTACCGTCCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTACAAAGCCAATGAATaGGTCCTCCCATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLYKANE*VLPWCG
Trigger: GCCACACCATGGGAGGACTCATTCATTGGCTTTGTA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTATTGCTACTCCCCTCTaGGAAGGCTACAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLIATPL*EGYSQN
Trigger: GTTTTGGCTGTAGCCTTCGCAGAGGGGAGTAGCAAT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTATTGCTACTCCCCTCTaGGAAGGCTACAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGIATPL*EGYSQN
Trigger: GTTTTGGCTGTAGCCTTCGCAGAGGGGAGTAGCAAT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATTACCAGGTACCCCAGTaGCTGCACAAAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDYQVPQ*LHKGMM
Trigger: CATCATCCCTTTGTGCAGGCACTGGGGTACCTGGTA...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGAAGCCTCTTTTATCTaGTACGTGAACTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSEASFI*YVNLPI
Trigger: AATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGCAGGAGAGAACCTGTaGAGATTCCAGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGAGENL*RFQFIS
Trigger: AGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGATGTGGGAGGTAACATaGCAGCTCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMMWEVT*QLFSGQ
Trigger: CTGCCCTGAGAAGAGCTGGCATGTTACCTCCCACAT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTTTTCTCCTAGAGTATaGTGCCTTCCAAAATCAAAT +
Preference number: 4 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEFSPRV*CLPKSN
Trigger: ATTTGATTTTGGAAGGCAGCATACTCTAGGAGAAAA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGCATTGTGGGATGTGTaGAGCTCAGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTALWDV*SSVEVG
Trigger: CCCCACCTCCACTGAGCTGCACACATCCCACAATGC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACTAGGATGGGATGAGTaGCCCTTCCTAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILELGWDE*PFLAAQ
Trigger: CTGGGCTGCTAGGAAGGGGCACTCATCCCATCCTAG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTGGACTCTCCATTCTTaGTTCACAAGCCTTCACCGG +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLWTLHS*FTSLHR
Trigger: CCGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGHRAR*LMSGCC
Trigger: ACAACATCCTGACATCAGCCACCGAGCCCTATGACC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAAGGTGGGCCAAGTTCTaGAACGAGCGGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTRWAKF*NEREKE
Trigger: CTCCTTCTCCCGCTCGTTCCAGAACTTGGCCCACCT...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTCACTTCGGTCTTGCTaGCTGTGTAGCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCSLRSC*LCSRCG
Trigger: ACCACACCTGCTACACAGCCAGCAAGACCGAAGTGA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCTCATCCTCCTTGTCTaGGGGCTGAAAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMLILLV*GLKSCS
Trigger: AGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATGAG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCCTAGGCCAGTCGCCTaGAGGACCTTTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCPRPVA*RTFVCF
Trigger: AAAGCAAACAAAGGTCCTCCAGGCGACTGGCCTAGG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCTGCCTTCCAAGGGATaGCCACAGATTAGACGATTC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLPSKG*PQIRRF
Trigger: GAATCGTCTAATCTGTGGCCATCCCTTGGAAGGCAG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGATGGGATCAGCTTTCTaGTTTGGTGTATACCTGCAT +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWMGSAF*FGVYLH
Trigger: ATGCAGGTATACACCAAACCAGAAAGCTGATCCCAT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAATGTGGGACTGAATTaGAGCAAGTCTGTAGACCTA +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPNVGLN*SKSVDL
Trigger: TAGGTCTACAGACTTGCTCCAATTCAGTCCCACATT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCACTTGCCTATTGATGTaGCTTTGCTTGTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSTCLLM*LCLFHE
Trigger: TTCATGGAACAAGCAAAGCCACATCAATAGGCAAGT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGCAGGGATGTTGGCATaGATATTCCTCCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGAGMLA*IFLHAW
Trigger: CCAAGCATGGAGGAATATCCATGCCAACATCCCTGC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAGGGCAGGCACCTTCTaGAGTCCGAGTGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILERAGTF*SPSDWQ
Trigger: CTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCCT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTACAAGAGGGCTTCCATaGCACACAGTTGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGTRGLP*HTVGDL
Trigger: TAGGTCACCAACTGTGTGCCATGGAAGCCCTCTTGT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTACACATATTCCAGAGTaGGTTATCATGACATTCATT +
Preference number: 4 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVTHIPE*VIMTFI
Trigger: AATGAATGTCATGATAACCCACTCTGGAATATGTGT...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGATGTTGTTCATCCGTaGCTTCTCCTTGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIDVVHP*LLLGVS
Trigger: GGACACACCAAGGAGAAGCCACGGATGAACAACATC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS-3UTR TCA 90 bp AACACACACATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCGGATCCAGTGACTCTTaGTGTGACAGAATGCTCACA +
Preference number: 4 (lower is better)
Translates to: NTHIANAATSTGSFPPHSGSSDS*CDRMLT
Trigger: TGTGAGCATTCTGTCACATCAAGAGTCACTGGATCC...GGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCTCATCAACAACCCCTaGGAGAGACAGAAACCCTGT +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMLINNP*ERQKPC
Trigger: ACAGGGTTTCTGTCTCTCTCAGGGGTTGTTGATGAG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGG +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALLSAT*TCLLMW
Trigger: CCACATCAATAGGCAAGTTCACGTAGCAGATAAAAG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTTTAGGCTTCCTTTGTaGGCAGGAGGGAGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLFRLPL*AGGRLL
Trigger: TAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTTGGCAAAGCCTTTTTaGCACAGGAAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLLAKPF*HRKAWS
Trigger: GCTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGGACTATCACAGGCCATaGCATCTCAAACCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLDYHRP*HLKPRA
Trigger: AGCTCTGGGTTTGAGATGTCATGGCCTGTGATAGTC...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGTGGCAGGAACCAAACTaGCTATCACAGGCCATGACA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMWQEPN*LSQAMT
Trigger: TGTCATGGCCTGTGATAGTCAGTTTGGTTCCTGCCA...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCCTGTGGAAGGAATATaGAGTTGGAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMPVEGI*SWRLVT
Trigger: TGTCACCAGCCTCCAACTTCATATTCCTTCCACAGG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCACAATGCGCTTTCTTaGAAATACTCCAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWHNALS*KYSRAK
Trigger: TTTTGCTCTGGAGTATTTTCAAGAAAGCGCATTGTG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTATGGCACACAGTTGGTaGCCTATTGAATGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGMAHSW*PIEWLG
Trigger: GCCTAACCATTCAATAGGTCACCAACTGTGTGCCAT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCTCTGCAGCTTGAAATaGATTTCCCAGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDLCSLK*ISQLPS
Trigger: TGAGGGCAGCTGGGAAATTCATTTCAAGCTGCAGAG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATAGGACGGTAGTGTCATaGCGAAGGGCTACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDRTVVS*RRATKV
Trigger: TACCTTTGTAGCCCTTCGTCATGACACTACCGTCCT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCATGAGGCTTACATATaGGTAACGAAGAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSHEAYI*VTKKLQ
Trigger: TTGCAGTTTCTTCGTTACTCATATGTAAGCCTCATG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTCAGCAGAAACTCTAGGTTAGCTTTCATCTTGAGGCTTGAAGGTCTGCATAACTGCCCCCTGCACAGATaGTCTGCAAGCTGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LSRNSRLAFILRLEGLHNCPLHR*SASCQL
Trigger: TAGCTGACAGCTTGCAGAGCATCTGTGCAGGGGGCA...GTTATGCAGACCTTCAAGCCTCAAGATGAAAGCTAACCTAGAGTTTCTGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp GTAAAGCAGCTCAGCAGAAACTCTAGGTTAGCTTTCATCTTGAGGCTTGAAGGTTTGAGGAGGAGTCCATaGCCCCTGCACAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: VKQLSRNSRLAFILRLEGLRRSP*PLHRCS
Trigger: AGAGCATCTGTGCAGGGGGCATGGACTCCTCCTCAA...ACCTTCAAGCCTCAAGATGAAAGCTAACCTAGAGTTTCTGCTGAGCTGCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATATTGCTACTCCCCTCTaGGAAGGCTACAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDIATPL*EGYSQN
Trigger: GTTTTGGCTGTAGCCTTCGCAGAGGGGAGTAGCAAT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGAACAGGTGGAGCCCTaGAGGATGCGAATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEEQVEP*RMRMLS
Trigger: GCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTTGGGGGCTGAAAAGCTaGTCTCTAGAAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGWGLKS*SLETSV
Trigger: GACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCA...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGGAAGCCTCTTTTATCTaGTACGTGAACTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWEASFI*YVNLPI
Trigger: AATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTC...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTTACCTTGGGTCAAGTaGACAGTTGCCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCLPWVK*TVACGR
Trigger: CCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGTGGACTCTCCATTCTTaGTTCACAAGCCTTCACCGG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMWTLHS*FTSLHR
Trigger: CCGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCA...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTAAAGCAGCTCAGCAGAAACTCTAGGTTAGCTTTCATCTTGAGGCTTGAAGGTTCAGCCAGAGCCCTGTaGATGTTCATCTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: VKQLSRNSRLAFILRLEGSARAL*MFISRG
Trigger: TCCACGGGAGATGAACATCCACAGGGCTCTGGCTGA...ACCTTCAAGCCTCAAGATGAAAGCTAACCTAGAGTTTCTGCTGAGCTGCTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATCAGCCAGAGCCCTGTaGATGTTCATCTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTSARAL*MFISRG
Trigger: TCCACGGGAGATGAACATCCACAGGGCTCTGGCTGA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGATGTTGTTCATCCGTaGCTTCTCTGGAGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGDVVHP*LLWSLL
Trigger: AAGCAGACTCCAGAGAAGCCACGGATGAACAACATC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAATACTTGCTGGGGTTaGTCTTTACTGCAGACTCGT +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRNTCWG*SLLQTR
Trigger: ACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTTCTGTTGGGACATCTaGATGACATTGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCFCWDI*MTLRGR
Trigger: CCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTTCATTATTGTGCTTATaGACACAGCAGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGSLLCL*TQQLPG
Trigger: GCCAGGGAGCTGCTGTGTCCATAAGCACAATAATGA...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGTTTCCTGTTCCTGTTaGGAGGCACACCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEVSCSC*EAHPAE
Trigger: CTCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAAC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGGTTTATGTGTCTGTTaGGAGGAAAGCAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGGLCVC*EESREG
Trigger: ACCCTCTCTGCTTTCCTCCCAACAGACACATAAACC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTACTCTTATAAACCCCTaGGGACCAGCCCTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGTLINP*GPALKK
Trigger: CTTCTTAAGGGCTGGTCCCCAGGGGTTTATAAGAGT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGA +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPISFLV*CIPACR
Trigger: TCTACATGCAGGTATACACCAAACCAGAAAGCTGAT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTGGACAGCTGAATAAATaGGATACCTCTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGGQLNK*DTSLSQ
Trigger: CTGGGACAGAGAGGTATCCCATTTATTCAGCTGTCC...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGGCCACCAGCCTGGTTaGGCTAGAAATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTGHQPG*ARNHGI
Trigger: GATGCCATGATTTCTAGCCCAACCAGGCTGGTGGCC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAAGGAGAGGGAAATCTTaGGCTTTAGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRRRGKS*ALGFLC
Trigger: ACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCTGAGGGCAGAAGCCTaGTTAGGAGGTGAAGTAATT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGLRAEA*LGGEVI
Trigger: AATTACTTCACCTCCTAACCAGGCTTCTGCCCTCAG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTATGAGTGACCTGGCCTaGAAATCTGAGGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLMSDLA*KSEVFW
Trigger: CCAGAAAACCTCAGATTTCCAGGCCAGGTCACTCAT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTATGAGTGACCTGGCCTaGAAATCTGAGGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGMSDLA*KSEVFW
Trigger: CCAGAAAACCTCAGATTTCCAGGCCAGGTCACTCAT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACAGAGCAGGAGCTTCTaGGCTAACATCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTQSRSF*ANIRLG
Trigger: ACCCAGCCTGATGTTAGCCCAGAAGCTCCTGCTCTG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAGTGCACAGTTGCCTGTaGAAGGAATATGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRVHSCL*KEYEVG
Trigger: TCCAACTTCATATTCCTTCCACAGGCAACTGTGCAC...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACC +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLWSPSD*QPFHFT
Trigger: GGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGACAAGAGGGCTTCCATaGCACACAGTTGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLTRGLP*HTVGDL
Trigger: TAGGTCACCAACTGTGTGCCATGGAAGCCCTCTTGT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGGACCGTATCCAAATaGAAACTCCAAACTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPRTVSK*KLQTQN
Trigger: ATTCTGAGTTTGGAGTTTCCATTTGGATACGGTCCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTCATGTGGCGGGATCTaGGTAACACTGCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGSCGGI*VTLLKI
Trigger: GATTTTGAGCAGTGTTACCCAGATCCCGCCACATGA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGATGTTGTTCATCCGTaGCTTCTCATGTGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCDVVHP*LLMWRD
Trigger: ATCCCGCCACATGAGAAGCCACGGATGAACAACATC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441885.8
3UTR CAA 72 bp TGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTaGGGTCAAGTGCACAGTTGCCTGTGGAAGGAATAT +
Preference number: 4 (lower is better)
Translates to: WSPSDWQPFHFT*GQVHSCLWKEY
Trigger: ATATTCCTTCCACAGGCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGACAAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATGGCGTTCCCTAGGTGTGACAAATCCAGATaGGATGAAGTTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: RQASGLHTIFSFQMAFPRCDKSR*DEVMEI
Trigger: GATCTCCATAACTTCATCTCATCTGGATTTGTCACA...CCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTGTGACAAATCCAGATaGGATGAAGTTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGCDKSR*DEVMEI
Trigger: GATCTCCATAACTTCATCTCATCTGGATTTGTCACA...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGAGTAGGAGTGATCTCTaGACTGAGCAGGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMSRSDL*TEQVDR
Trigger: TCTGTCTACCTGCTCAGTTCAGAGATCACTCCTACT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGATTTTCCAACCCAACTaGCATCAGAGCCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMIFQPN*HQSLSA
Trigger: GGCTGAAAGGCTCTGATGTCAGTTGGGTTGGAAAAT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATATTTTCCAACCCAACTaGCATCAGAGCCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDIFQPN*HQSLSA
Trigger: GGCTGAAAGGCTCTGATGTCAGTTGGGTTGGAAAAT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAGCAGAAGAAATCCTTaGAAAGAAGTAAGCATTGCA +
Preference number: 4 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPSRRNP*KEVSIA
Trigger: TGCAATGCTTACTTCTTTTCAAGGATTTCTTCTGCT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGATGGATGGGACAGCTaGATAAATGGGATACCTCTC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDDGWDS*INGIPL
Trigger: GAGAGGTATCCCATTTATTCAGCTGTCCCATCCATC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCGTGAACTTGCCTATTaGTGTGGCTTTGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDRELAY*CGFACS
Trigger: GGAACAAGCAAAGCCACATCAATAGGCAAGTTCACG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCGTGAACTTGCCTATTaGTGTGGCTTTGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMRELAY*CGFACS
Trigger: GGAACAAGCAAAGCCACATCAATAGGCAAGTTCACG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTTTAGGCTTCCTTTGTaGGCAGGAGGGAGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLFRLPL*AGGRLL
Trigger: TAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCAGATTCGGACAGGATaGCAGGAAATGTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMQIRTG*QEMYVG
Trigger: TCCCACATACATTTCCTGTCATCCTGTCCGAATCTG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCAGATTCGGACAGGATaGCAGGAAATGTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDQIRTG*QEMYVG
Trigger: TCCCACATACATTTCCTGTCATCCTGTCCGAATCTG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGGTGCTGGCAGGGAATaGAAGCCCTACAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEGAGRE*KPYSVR
Trigger: TCTTACACTGTAGGGCTTTCATTCCCTGCCAGCACC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AACACACACATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCACACATTGCAAATGCTaGTACATCCACCGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NTHIANAATSTGSFPPHSTHCKC*YIHRQF
Trigger: AAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGT...GGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGATGAGCGGAGAGGATaGAGGACAACCACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEDERRG*RTTTSH
Trigger: ATGAGAGGTGGTTGTCCTGCATCCTCTCCGCTCATC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTGHRAR*LMSGCC
Trigger: ACAACATCCTGACATCAGCCACCGAGCCCTATGACC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAATACTTGCTGGGGTTaGTCTTTACTGCAGACTCGT +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLNTCWG*SLLQTR
Trigger: ACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGAGATGAATACTTGCTaGGGTTGGTCTTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGEMNTC*GWSLLQ
Trigger: CTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAGTTATTGGAGGCACTaGGATGAGAGTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLSYWRH*DESASC
Trigger: GCAAGATGCACTCTCATCCCAGTGCCTCCAATAACT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGTTTATGTGTCTGTTaGGAGGAAAGCAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGLCVC*EESREG
Trigger: ACCCTCTCTGCTTTCCTCCCAACAGACACATAAACC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACTGCATGTAGACACCTaGGAAGGGCATTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTLHVDT*EGHSQP
Trigger: TGGCTGAGAATGCCCTTCCCAGGTGTCTACATGCAG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGA +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGISFLV*CIPACR
Trigger: TCTACATGCAGGTATACACCAAACCAGAAAGCTGAT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGGACAGCTGAATAAATaGGATACCTCTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCGQLNK*DTSLSQ
Trigger: CTGGGACAGAGAGGTATCCCATTTATTCAGCTGTCC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAATTGGGGGCAAGGTTaGAACTTTCTAAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGNWGQG*NFLRGS
Trigger: ACTGCCTCTTAGAAAGTTCCAACCTTGCCCCCAATT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGATGAGTGACCTGGCCTaGAAATCTGAGGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMMSDLA*KSEVFW
Trigger: CCAGAAAACCTCAGATTTCCAGGCCAGGTCACTCAT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAGTGTGTTGGAGCAGTaGCTGAGAGCCCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILESVLEQ*LRALKD
Trigger: ATCCTTGAGGGCTCTCAGCCACTGCTCCAACACACT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTAACTTCATGCCCTTATaGGCCAACCTCCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCNFMPL*ANLQTF
Trigger: AAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCTCAGTGTCCAGACTTaGTCTTCAGGACACATATTC +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGLSVQT*SSGHIF
Trigger: GAATATGTGTCCTGAAGACCAAGTCTGGACACTGAG...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTCTCAGTGTCCAGACTTaGTCTTCAGGACACATATTC +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGLSVQT*SSGHIF
Trigger: GAATATGTGTCCTGAAGACCAAGTCTGGACACTGAG...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTACAAAGGTACTAGGATaGGATGAGTGCCCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCTKVLG*DECPFL
Trigger: TAGGAAGGGGCACTCATCCCATCCTAGTACCTTTGT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTIGLGG*CQDVVH
Trigger: ATGAACAACATCCTGACATCAGCCACCGAGCCCTAT...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAATGGAGAACTTGGTGCTaGGAAGCTTTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEWRTWC*EALTLE
Trigger: CTCCAGTGTCAAAGCTTCTCAGCACCAAGTTCTCCA...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGCTTTGCTTGTTCCATaGAGATGGATGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEALLVP*RWMGQL
Trigger: CAGCTGTCCCATCCATCTTCATGGAACAAGCAAAGC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACCTGGCCTGGAAATCTaGGGTTTTCTGGAAATCAGG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEPGLEI*GFLEIR
Trigger: CCTGATTTCCAGAAAACCTCAGATTTCCAGGCCAGG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACTTCTGGAGTCCGAGTaGTTGGCAGCCCTTTCATTT +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILELLESE*LAALSF
Trigger: AAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACACAATGCGCTTTCTTaGAAATACTCCAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRHNALS*KYSRAK
Trigger: TTTTGCTCTGGAGTATTTTCAAGAAAGCGCATTGTG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCAGTTGGTGACCTATTaGATGGTTAGGCCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDQLVTY*MVRPLN
Trigger: GTTTAAGGGCCTAACCATTCAATAGGTCACCAACTG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACATGAGGCTTACATATaGGTAACGAAGAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRHEAYI*VTKKLQ
Trigger: TTGCAGTTTCTTCGTTACTCATATGTAAGCCTCATG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAAAGAATCATTATTGTaGTTATGGACACAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGKESLL*LWTQQL
Trigger: GAGCTGCTGTGTCCATAAGCACAATAATGATTCTTT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGAAGGACACAGTCCATTaGTTTCTCTGTGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMKDTVH*FLCGLW
Trigger: CCACAAACCACAGAGAAAGCAATGGACTGTGTCCTT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GACAGGGATACACTACCCCTACAACAGAATTCACATTTGATCTATAACAGCACATCCCAGACAAGCCTCTaGCCTCCACACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: DRDTLPLQQNSHLIYNSTSQTSL*PPHHLL
Trigger: GAGAAGATGGTGTGGAGGCCAGAGGCTTGTCTGGGA...TGTGCTGTTATAGATCAAATGTGAATTCTGTTGTAGGGGTAGTGTATCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCATTGCTTTCTCTGTaGTTTGTGGACTTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPLLSL*FVDLVR
Trigger: TCTAACCAAGTCCACAAACCACAGAGAAAGCAATGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTATGGGATCAGCTTTCTaGTTTGGTGTATACCTGCAT +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGMGSAF*FGVYLH
Trigger: ATGCAGGTATACACCAAACCAGAAAGCTGATCCCAT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp GGAAAAGGAATAATAGCCAAGAGGCGAACACACACATaGCAAATGCTGCTACATCCACCGGCAGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GKGIIAKRRTHT*QMLLHPPAVFH
Trigger: GTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTATTCCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CAA 72 bp AACACTCGTAGGACCTTGTTTAAACAAAAGACAGAATaGAGGAGGAGTCCATGCCCCCTGCACAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: NTRRTLFKQKTE*RRSPCPLHRCS
Trigger: AGAGCATCTGTGCAGGGGGCATGGACTCCTCCTCAATTCTGTCTTTTGTTTAAACAAGGTCCTACGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGCGGTTCTAGATGAATaGATGAGACCGAGTAGCCTA +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEAVLDE*MRPSSL
Trigger: TAGGCTACTCGGTCTCATTCATTCATCTAGAACCGC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCTTTTATCTGCTACGTaGACTTGCCTATTGATGTGG +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCLLSAT*TCLLMW
Trigger: CCACATCAATAGGCAAGTTCACGTAGCAGATAAAAG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCTTTTCTCCTAGAGTATaGTGCCTTCCAAAATCAAAT +
Preference number: 4 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAFSPRV*CLPKSN
Trigger: ATTTGATTTTGGAAGGCAGCATACTCTAGGAGAAAA...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAATGAATTTCCCAGCTaGCCTCAAGTACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLNEFPS*PQVQTS
Trigger: TGAAGTTTGTACTTGAGGGCAGCTGGGAAATTCATT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAATTTCACAGTGTGCTATaGGGATTGGTCCCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEFHSVL*GLVPVV
Trigger: GACAACAGGGACCAATCCCCATAGCACACTGTGAAA...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCCATTGCTTTCTCTGTaGTTTGTGGACTTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDPLLSL*FVDLVR
Trigger: TCTAACCAAGTCCACAAACCACAGAGAAAGCAATGG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCCATTGCTTTCTCTGTaGTTTGTGGACTTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLPLLSL*FVDLVR
Trigger: TCTAACCAAGTCCACAAACCACAGAGAAAGCAATGG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTATCAGCTTTCTGGTTTaGTGTATACCTGCATGTAGA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLISFLV*CIPACR
Trigger: TCTACATGCAGGTATACACCAAACCAGAAAGCTGAT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAATGTGGGACTGAATTaGAGCAAGTCTGTAGACCTA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLNVGLN*SKSVDL
Trigger: TAGGTCTACAGACTTGCTCCAATTCAGTCCCACATT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGGACAGCTGAATAAATaGGATACCTCTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEGQLNK*DTSLSQ
Trigger: CTGGGACAGAGAGGTATCCCATTTATTCAGCTGTCC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTACTTGCCTATTGATGTaGCTTTGCTTGTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLTCLLM*LCLFHE
Trigger: TTCATGGAACAAGCAAAGCCACATCAATAGGCAAGT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGGAGAAATTTGAATTaGGGGCAAGGTTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLRRNLN*GQGWNF
Trigger: AAAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTAGGAGAAATTTGAATTaGGGGCAAGGTTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGRRNLN*GQGWNF
Trigger: AAAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTAAATCTGAGGTTTTCTaGAAATCAGGAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGKSEVF*KSGVSG
Trigger: CCCAGAAACTCCTGATTTCCAGAAAACCTCAGATTT...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTAAATCTGAGGTTTTCTaGAAATCAGGAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGKSEVF*KSGVSG
Trigger: CCCAGAAACTCCTGATTTCCAGAAAACCTCAGATTT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATGGAGTCCGAGTGATTaGCAGCCCTTTCATTTTACC +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTWSPSD*QPFHFT
Trigger: GGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDLQCKS*MKLQSS
Trigger: TGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTCTACAGTGTAAGAGCTaGATGAAACTTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCLQCKS*MKLQSS
Trigger: TGAGCTCTGAAGTTTCATCCAGCTCTTACACTGTAG...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTAGGACCGTATCCAAATaGAAACTCCAAACTCAGAAT +
Preference number: 4 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGRTVSK*KLQTQN
Trigger: ATTCTGAGTTTGGAGTTTCCATTTGGATACGGTCCT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTGTGACAAATCCAGATaGGATGAAGTTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCCDKSR*DEVMEI
Trigger: GATCTCCATAACTTCATCTCATCTGGATTTGTCACA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACACTGCTGTTGGATCTaGCTGTTTTTAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTHCCWI*LFLGSH
Trigger: GTGTGATCCTAAAAACAGTCAGATCCAACAGCAGTG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR TCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGTGGTAAGGCTGGGATaGGAAATGTCTTGGAATCAA +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEVVRLG*EMSWNQ
Trigger: TTGATTCCAAGACATTTCTCATCCCAGCCTTACCAC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTGAAGCCTCTTTTATCTaGTACGTGAACTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCEASFI*YVNLPI
Trigger: AATAGGCAAGTTCACGTAGCAGATAAAAGAGGCTTC...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGCAGGAGAGAACCTGTaGAGATTCCAGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTAGENL*RFQFIS
Trigger: AGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATAATGAATTTCCCAGCTaGCCTCAAGTACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDNEFPS*PQVQTS
Trigger: TGAAGTTTGTACTTGAGGGCAGCTGGGAAATTCATT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp AAAAGGAATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCTTTCACAGTGTGCTATaGGGATTGGTCCCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: KRNNSQEANTHIANAATSFHSVL*GLVPVV
Trigger: GACAACAGGGACCAATCCCCATAGCACACTGTGAAA...GGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTATTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAATACTTGCTGGGGTTaGTCTTTACTGCAGACTCGT +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILENTCWG*SLLQTR
Trigger: ACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAGGAGAGGGAAATCTTaGGCTTTAGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILERRGKS*ALGFLC
Trigger: ACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGAGGAGAAATTTGAATTaGGGGCAAGGTTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMRRNLN*GQGWNF
Trigger: AAAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp AAGCAGCTCAGCAGAAACTCTAGGTTAGCTTTCATCTaGAGGCTTGAAGGTCTGCATAACCTTCTACCTTTG +
Preference number: 4 (lower is better)
Translates to: KQLSRNSRLAFI*RLEGLHNLLPL
Trigger: CAAAGGTAGAAGGTTATGCAGACCTTCAAGCCTCAAGATGAAAGCTAACCTAGAGTTTCTGCTGAGCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR TCA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATAGCAGAAGAAATCCTTaGAAAGAAGTAAGCATTGCA +
Preference number: 4 (lower is better)
Translates to: SAELRAGKTPFIRALLLDSRRNP*KEVSIA
Trigger: TGCAATGCTTACTTCTTTTCAAGGATTTCTTCTGCT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTTCTCCTAGAGTATGCTaGCTTCCAAAATCAAATATA +
Preference number: 4 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGSPRVC*LPKSNI
Trigger: TATATTTGATTTTGGAAGGCAGCATACTCTAGGAGA...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTTTTTCTCCTAGAGTATaGTGCCTTCCAAAATCAAAT +
Preference number: 4 (lower is better)
Translates to: VFSSLRRESIKETHSHNIFSPRV*CLPKSN
Trigger: ATTTGATTTTGGAAGGCAGCATACTCTAGGAGAAAA...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAAATGTGGGACTGAATTaGAGCAAGTCTGTAGACCTA +
Preference number: 4 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTNVGLN*SKSVDL
Trigger: TAGGTCTACAGACTTGCTCCAATTCAGTCCCACATT...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CCA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTACACATATTCCAGAGTaGGTTATCATGACATTCATT +
Preference number: 4 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLTHIPE*VIMTFI
Trigger: AATGAATGTCATGATAACCCACTCTGGAATATGTGT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp ATCTTGAGGCTTGAAGGTCTGCATAACCTTCTACCTTaGTGTCCACATCATAGAGTGTTTATGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: ILRLEGLHNLLP*CPHHRVFMETH
Trigger: GTGTGTCTCCATAAACACTCTATGATGTGGACACAAAGGTAGAAGGTTATGCAGACCTTCAAGCCTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR GCA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGTCTCCTAGAGTATGCTaGCTTCCAAAATCAAATATA +
Preference number: 4 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMSPRVC*LPKSNI
Trigger: TATATTTGATTTTGGAAGGCAGCATACTCTAGGAGA...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGTCTCCTAGAGTATGCTaGCTTCCAAAATCAAATATA +
Preference number: 4 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLSPRVC*LPKSNI
Trigger: TATATTTGATTTTGGAAGGCAGCATACTCTAGGAGA...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR GCA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAATATCATGACATTCATTaGCACACAACAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LPSFLASRPKGEAEEILEYHDIH*HTTACE
Trigger: TTCACAGGCTGTTGTGTGGCAATGAATGTCATGATA...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp AGGTGCATGGAATGTAAGAAAATATTGCACAGTTCCTaGTTTACTCACACAAGACACGTATCTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RCMECKKILHSS*FTHTRHVSQGK
Trigger: CTTCCCCTGAGATACGTGTCTTGTGTGAGTAAACAAGGAACTGTGCAATATTTTCTTACATTCCATGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
3UTR CAA 72 bp GACATAGTTTTCTGGATTTTGAAATGTGGGACTGAATaGGAGCAAGTCTGTAGACCTATCTCTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DIVFWILKCGTE*EQVCRPISTSF
Trigger: AAAAGAAGTAGAGATAGGTCTACAGACTTGCTCCAATTCAGTCCCACATTTCAAAATCCAGAAAACTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
3UTR CAA 72 bp GGAAGGTTAATGTGTTTGCTGATTTACAAGATGGGTTaGAATATCACAAACTTGGACTCTCCATTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GRLMCLLIYKMG*NITNLDSPFLL
Trigger: AAGCAAGAATGGAGAGTCCAAGTTTGTGATATTCAAACCCATCTTGTAAATCAGCAAACACATTAACCTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 90 bp TCGGGAAAGGCCGTCCGCTCCGGGGACAGCAGCGGGTCCTGGGAGTaGAGGCGCTCCGTGGAGAGCAGCTGCTCGTCGGACAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: SGKAVRSGDSSGSWE*RRSVESSCSSDRMR
Trigger: CCGCATCCTGTCCGACGAGCAGCTGCTCTCCACGGAGCGCCTGCACTCCCAGGACCCGCTGCTGTCCCCGGAGCGGACGGCCTTTCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp GCCCGGATGGGCCGGCGGGGTCGTTCCCTTGGCAACGGCTTCTGTTaGGACATCTGGATGACATTGAGGGGGAGGGTGCCGCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ARMGRRGRSLGNGFC*DIWMTLRGRVPRAA
Trigger: GGCTGCCCGCGGCACCCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCCGGCCCATCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 90 bp GTGGACACAAAGACGTCCGTGTGCGAGATGGCCCTGGACAGCGACTaGTCGGGAAAGGCCGTCCGCTCCGGGGACAGCAGCGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VDTKTSVCEMALDSD*SGKAVRSGDSSGSW
Trigger: CCAGGACCCGCTGCTGTCCCCGGAGCGGACGGCCTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp AGCGGTCCAGCACGGGTGTGGACACAAAGACGTCCGTGTGCGAGATaGCCCTGGACAGCGACTGCTCGGGAAAGGCCGTCCGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: SGPARVWTQRRPCAR*PWTATARERPSAPG
Trigger: CCCCGGAGCGGACGGCCTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCACACCCGTGCTGGACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTTCTCCGGGTCGTACTaGTTCTCGGGCCCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAFSGSY*FSGPGD
Trigger: GTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGAA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGCGGGGTCGTTCCCTaGGCAACGGCTTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGGVVP*ATASVG
Trigger: CCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCAGCACGGGTGTGGACACAAAGACGTCCGTGTGCGAGATGGCCCTaGACAGCGACTGCTCGGGAAAGGCCGTCCGCTCCGGGGACAGCA +
Preference number: 5 (lower is better)
Translates to: PARVWTQRRPCARWP*TATARERPSAPGTA
Trigger: TGCTGTCCCCGGAGCGGACGGCCTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCACACCCGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGTGCCCTGGAGTCTGCTaGGCCGTACGCACAGGAGTG +
Preference number: 5 (lower is better)
Translates to: IPGWPSPSGPPQALVRSACPGVC*AVRTGV
Trigger: CACTCCTGTGCGTACGGCCAAGCAGACTCCAGGGCA...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCTTCTCCGGGTCGTACTTGTTCTCGGGCCCCGGCGACACCACCTTaGTGCTGGGCGTCTGTACCCACACCGGGCTCTGGTAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: PSPGRTCSRAPATPP*CWASVPTPGSGSWC
Trigger: GCACCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGAGCTGCTCCACCGTGTaGTGTCTGCGTGAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRSCSTV*CLREAK
Trigger: CTTTGCCTCACGCAGACACAACACGGTGGAGCAGCT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 90 bp TGGAGAGCAGCTGCTCGTCGGACAGGATGCGGTCGTAGGGCATGCTaGACTCATCTGGCAGGCCCCGATCCGGGGACAGGACCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: WRAAARRTGCGRRAC*THLAGPDPGTGPCP
Trigger: AGGACAGGGTCCTGTCCCCGGATCGGGGCCTGCCAGATGAGTTCAGCATGCCCTACGACCGCATCCTGTCCGACGAGCAGCTGCTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 90 bp TCTCCGGGTCGTACTTGTTCTCGGGCCCCGGCGACACCACCTTGGTaGTGGGCGTCTGTACCCACACCGGGCTCTGGTAGTTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: SPGRTCSRAPATPPW*WASVPTPGSGSWCT
Trigger: AGTGCACCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCACCTTGGTGCTGGGCGTCTGTACCCACACCGGGCTCTGGTAGTTaGTGCACTGGCGCTGGTCCAGCTTCTCGTGGCGCTTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PPWCWASVPTPGSGS*CTGAGPASRGASCS
Trigger: GCTGCAAGAAGCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTA +
Preference number: 5 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRREEQER*LLVLGL
Trigger: TAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTC...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGTTTCCTGTTCCTGTaGGGAGGCACACCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGFLFL*GGTPCR
Trigger: TCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 90 bp CCTTGGTGCTGGGCGTCTGTACCCACACCGGGCTCTGGTAGTTGGTaGACTGGCGCTGGTCCAGCTTCTCGTGGCGCTTCTTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PWCWASVPTPGSGSW*TGAGPASRGASCSR
Trigger: TCTGCTGCAAGAAGCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTTCTCCGGGTCGTACTaGTTCTCGGGCCCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEFSGSY*FSGPGD
Trigger: GTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGAA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTACTCGTCAGCCTCCTaGTCGGTTAGCCTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRYSSAS*SVSLFR
Trigger: TCTGAAGAGGCTAACCGACAAGGAGGCTGACGAGTA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCCCAATAGCCTGGAGTaGATTCCCCCAGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLPNSLE*IPPAPT
Trigger: GGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGGG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGTGGCAACGGCTTCTGTaGGGACATCTGGATGACATT +
Preference number: 5 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRWQRLL*GHLDDI
Trigger: AATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCA...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGAGCTGCTCCACCGTGTaGTGTCTGCGTGAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLSCSTV*CLREAK
Trigger: CTTTGCCTCACGCAGACACAACACGGTGGAGCAGCT...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCTGGGTCTAAGTGTATaGGACCAGGCCATCGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLLGLSV*DQAIGA
Trigger: AGCCCCGATGGCCTGGTCCAATACACTTAGACCCAG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCGTCTGGCTCTGGCCCAGGGTGGCGTATGAGTTATTGGAGGCACTaGGATGAGAGTGCATCTTGCTCATGCGGTAGCGGTCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: PSGSGPGWRMSYWRH*DESASCSCGSGPAR
Trigger: CCGTGCTGGACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACGCCACCCTGGGCCAGAGCCAGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTGTCACCTCCCCAGGAGGCCGTCACACCATGCCAACCCCCAGGCTGGAGGCGGAGTGTGCTATGGGGATaGGTCCCTGTTGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LSPPQEAVTPCQPPGWRRSVLWG*VPVVLR
Trigger: TCTTAAGACAACAGGGACCAATCCCCATAGCACACT...CCGCCTCCAGCCTGGGGGTTGGCATGGTGTGACGGCCTCCTGGGGAGGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGGCGGGGTCGTTCCCTaGGCAACGGCTTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSGGVVP*ATASVG
Trigger: CCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGATATTCCTCCATGCTaGGAGACTCAGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLDIPPC*ETQEAL
Trigger: GAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp GCTTGGCTGCCGTCTGGCTCTGGCCCAGGGTGGCGTATGAGTTATTaGAGGCACTGGGATGAGAGTGCATCTTGCTCATGCGGTAGCGGT +
Preference number: 5 (lower is better)
Translates to: AWLPSGSGPGWRMSY*RHWDESASCSCGSG
Trigger: ACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACGCCACCCTGGGCCAGAGCCAGACGGCAGCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCTGCCCTGGAGTCTGCTaGGCCGTACGCACAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSCPGVC*AVRTGV
Trigger: CACTCCTGTGCGTACGGCCAAGCAGACTCCAGGGCA...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTTTCTCCGGGTCGTACTaGTTCTCGGGCCCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPFSGSY*FSGPGD
Trigger: GTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGAA...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGACATCTGGATGACATaGAGGGGGAGGGTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSDIWMT*RGRVPR
Trigger: CCGCGGCACCCTCCCCCTCAATGTCATCCAGATGTC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGACATCTGGATGACATaGAGGGGGAGGGTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCDIWMT*RGRVPR
Trigger: CCGCGGCACCCTCCCCCTCAATGTCATCCAGATGTC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTCTGGGTCTAAGTGTATaGGACCAGGCCATCGGGGCT +
Preference number: 5 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVLGLSV*DQAIGA
Trigger: AGCCCCGATGGCCTGGTCCAATACACTTAGACCCAG...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGGGCCAGCACCCCATaGCTACTCCCCTCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCRASTP*LLPSAK
Trigger: CTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCCT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp AGGCAAAGGCATGACGCTTGGCTGCCGTCTGGCTCTGGCCCAGGGTaGCGTATGAGTTATTGGAGGCACTGGGATGAGAGTGCATCTTGC +
Preference number: 5 (lower is better)
Translates to: RQRHDAWLPSGSGPG*RMSYWRHWDESASC
Trigger: GCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACGCCACCCTGGGCCAGAGCCAGACGGCAGCCAAGCGTCATGCCTTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGTTACACTCGAACTCCTaGTCGTACTGGCCGCTCACG +
Preference number: 5 (lower is better)
Translates to: EVHVGTGGALQDANVEPELHSNS*SYWPLT
Trigger: CGTGAGCGGCCAGTACGACAAGGAGTTCGAGTGTAA...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGGAATACTTGCTGGGGTaGGTCTTTACTGCAGACTCG +
Preference number: 5 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLEYLLG*VFTADS
Trigger: CGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTC...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCGGGGGTATGGCTTTTaGGGCAAAGGTGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRGYGF*GKGGPP
Trigger: GGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCCG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGAGGGCCAGCACCCCATaGCTACTCCCCTCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWRASTP*LLPSAK
Trigger: CTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCCT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACA +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCCRMRM*SPRPRT
Trigger: TGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTCCCAATAGCCTGGAGTaGATTCCCCCAGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCPNSLE*IPPAPT
Trigger: GGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGGG...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGGGAGCTTCAGGGGACTaGCTAGTGGCAGGAACCAAA +
Preference number: 5 (lower is better)
Translates to: EVHVGTGGALQDANVEPEGASGD*LVAGTK
Trigger: TTTGGTTCCTGCCACTAGCAAGTCCCCTGAAGCTCC...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGGGTGGGCAGCAAAGTaGAGCAGGGTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCGWAAK*SRVFSS
Trigger: GGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTCCCGGCGACACCACCTaGGTGCTGGGCGTCTGTACC +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLPGDTT*VLGVCT
Trigger: GGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGG...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGTACTCGTCAGCCTCCTaGTCGGTTAGCCTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEYSSAS*SVSLFR
Trigger: TCTGAAGAGGCTAACCGACAAGGAGGCTGACGAGTA...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCAGGGCCAGCACCCCATaGCTACTCCCCTCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPARASTP*LLPSAK
Trigger: CTTCGCAGAGGGGAGTAGCAATGGGGTGCTGGCCCT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCAAGGGGGCAAGTGTGTaGGAGCAGTGGCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSKGASV*EQWLRA
Trigger: GGCTCTCAGCCACTGCTCCAACACACTTGCCCCCTT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCCTGGCCTTCCAGCCGCACGACTCCAGGAATGCATCCCCAGTGTGGGGTCTGCCTCAGTGTCCAGACTaGGTCTTCAGGACACATATT +
Preference number: 5 (lower is better)
Translates to: SLAFQPHDSRNASPVWGLPQCPD*VFRTHI
Trigger: AATATGTGTCCTGAAGACCAAGTCTGGACACTGAGG...CAGACCCCACACTGGGGATGCATTCCTGGAGTCGTGCGGCTGGAAGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGGGTGGGCAGCAAAGTaGAGCAGGGTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPGWAAK*SRVFSS
Trigger: GGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGCTGATGTCAGGATGTaGTTCATCCGTGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEADVRM*FIRGFS
Trigger: GGAGAAGCCACGGATGAACAACATCCTGACATCAGC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS TCA 90 bp GTTCTGGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCATCCGTGGCTTCTCCTTGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: VLERAGEGEVIGLGG*CQDVVHPWLLLGVS
Trigger: GGACACACCAAGGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS TCA 90 bp GTTCTGGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCATCCGTGGCTTCTCATGTGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: VLERAGEGEVIGLGG*CQDVVHPWLLMWRD
Trigger: ATCCCGCCACATGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441885.8
CDS GCA 90 bp GGGTGGCGTATGAGTTATTGGAGGCACTGGGATGAGAGTGCATCTTaGTCATGCGGTAGCGGTCCAGCACGGGTGTGGACACAAAGACGT +
Preference number: 5 (lower is better)
Translates to: GWRMSYWRHWDESAS*SCGSGPARVWTQRR
Trigger: ACGTCTTTGTGTCCACACCCGTGCTGGACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCAAGTTCTGGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGTTCATCCGTGGCTTCTCATGTGGCG +
Preference number: 5 (lower is better)
Translates to: PSSGTSGRRRGHRAR*LMSGCCSSVASHVA
Trigger: CGCCACATGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCCAGAACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCTGTCAGAAGCCACGCATGTCACCAGGACAAGCTGCCATGGAACCACCCCACTGGGATGGGTGTCTCTaGGAAGTCTATCGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: SCQKPRMSPGQAAMEPPHWDGCL*EVYRPL
Trigger: TAGAGGGCGATAGACTTCCAAGAGACACCCATCCCA...GTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGACATGCGTGGCTTCTGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp ACACTCCCTGTGGTCCCTTCCCACAAGGAGCCGCCGGCATCTGTGTCCCCGCCACATAACCTTCTACCTTaGTGTCCACATCATAGAGTG +
Preference number: 5 (lower is better)
Translates to: TLPVVPSHKEPPASVSPPHNLLP*CPHHRV
Trigger: CACTCTATGATGTGGACACAAAGGTAGAAGGTTATG...TGGCGGGGACACAGATGCCGGCGGCTCCTTGTGGGAAGGGACCACAGGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCCCGGCGACACCACCTaGGTGCTGGGCGTCTGTACC +
Preference number: 5 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLPGDTT*VLGVCT
Trigger: GGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGGCGGGGTCGTTCCCTaGGCAACGGCTTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNIGGVVP*ATASVG
Trigger: CCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGACGGGGGTATGGCTTTTaGGGCAAAGGTGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRRGYGF*GKGGPP
Trigger: GGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCCG...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCTGGGGGCTGGAGAACTaGGTGCTGAGAAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSWGLEN*VLRSFD
Trigger: GTCAAAGCTTCTCAGCACCAAGTTCTCCAGCCCCCA...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCTGGGTGGCCGAGCCCATCAGGCCCACCCCAGGCTCTAGTGAGGAGTGCGGGGATGAGAAATGTCTaGGAATCAACTCATCAACAA +
Preference number: 5 (lower is better)
Translates to: IPGWPSPSGPPQALVRSAGMRNV*ESTHQQ
Trigger: TTGTTGATGAGTTGATTCCAAGACATTTCTCATCCC...CGCACTCCTCACTAGAGCCTGGGGTGGGCCTGATGGGCTCGGCCACCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGAGGCCCTCAAGTCTTaGTGGACAAAGGAGGATAAG +
Preference number: 5 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVEALKS*WTKEDK
Trigger: CTTATCCTCCTTTGTCCACAAAGACTTGAGGGCCTC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGCTCCCTCTCTGAAATaGGAACCGCCTCCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGAPSLK*EPPPSS
Trigger: GCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 90 bp GTTCTGGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCATCCGTGGCTTCTCTGGAGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VLERAGEGEVIGLGG*CQDVVHPWLLWSLL
Trigger: AAGCAGACTCCAGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS GCA 90 bp CGTATGAGTTATTGGAGGCACTGGGATGAGAGTGCATCTTGCTCATaGGGTAGCGGTCCAGCACGGGTGTGGACACAAAGACGTCCGTGT +
Preference number: 5 (lower is better)
Translates to: RMSYWRHWDESASCS*GSGPARVWTQRRPC
Trigger: ACACGGACGTCTTTGTGTCCACACCCGTGCTGGACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCAAGTTCTGGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGTTCATCCGTGGCTTCTCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: PSSGTSGRRRGHRAR*LMSGCCSSVASLES
Trigger: AGACTCCAGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCCAGAACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS CCA 90 bp CGTCAGCCTCCTTGTCGGTTAGCCTCTTCAGAGATGAATACTTGCTaGGGTTGGTCTTTACTGCAGACTCGTAGGATGGGGGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RQPPCRLASSEMNTC*GWSLLQTRRMGAGG
Trigger: CCCACCTGCCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTCTGAAGAGGCTAACCGACAAGGAGGCTGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCAAGTTCTGGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGTTCATCCGTGGCTTCTCCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: PSSGTSGRRRGHRAR*LMSGCCSSVASPWC
Trigger: ACACCAAGGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCCAGAACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGACGGTGAAGTTGGTCTaGTCCTTCTCCGGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWTVKLV*SFSGSY
Trigger: GTACGACCCGGAGAAGGACAAGACCAACTTCACCGT...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTGGGGGCTGGAGAACTaGGTGCTGAGAAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSWGLEN*VLRSFD
Trigger: GTCAAAGCTTCTCAGCACCAAGTTCTCCAGCCCCCA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCGAGGGGAGGAGAAATTaGAATTGGGGGCAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSEGRRN*NWGQGW
Trigger: CCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCTC...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGGAGCTTCAGGGGACTaGCTAGTGGCAGGAACCAAA +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSGASGD*LVAGTK
Trigger: TTTGGTTCCTGCCACTAGCAAGTCCCCTGAAGCTCC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGATATTCCTCCATGCTaGGAGACTCAGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPDIPPC*ETQEAL
Trigger: GAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 90 bp CCTCCTTGTCGGTTAGCCTCTTCAGAGATGAATACTTGCTGGGGTTaGTCTTTACTGCAGACTCGTAGGATGGGGGCAGGTGGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: PPCRLASSEMNTCWG*SLLQTRRMGAGGPS
Trigger: ACTTGGCCCACCTGCCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTCTGAAGAGGCTAACCGACAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCACCGGCTGCCCTGGAGTCTGCTaGGCCGTACGCACAGGAGTG +
Preference number: 5 (lower is better)
Translates to: NNSQEANTHIANAATSTGCPGVC*AVRTGV
Trigger: CACTCCTGTGCGTACGGCCAAGCAGACTCCAGGGCA...GCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTACTCGTCAGCCTCCTaGTCGGTTAGCCTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSYSSAS*SVSLFR
Trigger: TCTGAAGAGGCTAACCGACAAGGAGGCTGACGAGTA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGACATCTGGATGACATaGAGGGGGAGGGTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDDIWMT*RGRVPR
Trigger: CCGCGGCACCCTCCCCCTCAATGTCATCCAGATGTC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSQERLL*VLGLSV
Trigger: TACACTTAGACCCAGGACCAAGAGCAATCGCTCTTG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCTAGGAGGAATAAAGTaGCAGGGAGGATGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWLGGIK*QGGCGG
Trigger: TCCCCCACATCCTCCCTGCAACTTTATTCCTCCTAG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCCCAATAGCCTGGAGTaGATTCCCCCAGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNIPNSLE*IPPAPT
Trigger: GGTTGGGGCTGGGGGAATCAACTCCAGGCTATTGGG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GAGGTGCATGTGGGAACAGGTGGAGCCCTGCAGGATGCGAATGTTGAGCCCGAGTTGATGTGGCTTTGCTaGTTCCATGAAGATGGATGG +
Preference number: 5 (lower is better)
Translates to: EVHVGTGGALQDANVEPELMWLC*FHEDGW
Trigger: CCATCCATCTTCATGGAACAAGCAAAGCCACATCAA...CTCGGGCTCAACATTCGCATCCTGCAGGGCTCCACCTGTTCCCACATGCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTATCTGCTACGTGAACTaGCCTATTGATGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVICYVN*PIDVAL
Trigger: CAAAGCCACATCAATAGGCAAGTTCACGTAGCAGAT...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCTTGGCAAAGCCTTTTaGACACAGGAAGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSLGKAF*TQEGME
Trigger: CTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAAG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCACTGCAGGGTGGGCAGCAAAGTTGAGCAGGGTCTTCTCCTCCCTCAGGAGGAGGAGAAATTTGAATaGGGGGCAAGGTTGGAACTT +
Preference number: 5 (lower is better)
Translates to: GHCRVGSKVEQGLLLPQEEEKFE*GARLEL
Trigger: AAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCTC...CTCCTGAGGGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCCTGCAGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAAGGGGGCAAGTGTGTaGGAGCAGTGGCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLKGASV*EQWLRA
Trigger: GGCTCTCAGCCACTGCTCCAACACACTTGCCCCCTT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTGCTCCCTCTCTGAAATaGGAACCGCCTCCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLAPSLK*EPPPSS
Trigger: GCTGGAGGGAGGCGGTTCCAATTTCAGAGAGGGAGC...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCGCTGATGTCAGGATGTaGTTCATCCGTGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSADVRM*FIRGFS
Trigger: TGAGAAGCCACGGATGAACAACATCCTGACATCAGC...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCAGTGTGCTATGGGGATaGGTCCCTGTTGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSSVLWG*VPVVLR
Trigger: TCTTAAGACAACAGGGACCAATCCCCATAGCACACT...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAGCTGCTCCACCGTGTaGTGTCTGCGTGAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLSCSTV*CLREAK
Trigger: CTTTGCCTCACGCAGACACAACACGGTGGAGCAGCT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTTGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACA +
Preference number: 5 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCCRMRM*SPRPRT
Trigger: TGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCA...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCTAGGAGGAATAAAGTaGCAGGGAGGATGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALGGIK*QGGCGG
Trigger: TCCCCCACATCCTCCCTGCAACTTTATTCCTCCTAG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCTCGCCTGGAGGACCTTaGTTTGCTTTTGCTAATAGG +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSSPGGP*FAFANR
Trigger: CCTATTAGCAAAAGCAAACAAAGGTCCTCCAGGCGA...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGATGGGGGCTGGAGAACTaGGTGCTGAGAAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRWGLEN*VLRSFD
Trigger: GTCAAAGCTTCTCAGCACCAAGTTCTCCAGCCCCCA...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCAAGGAGAGGGAAATCTaGGGCTTTAGGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSKEREI*GFRLPL
Trigger: CAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCCTTGGCAAAGCCTTTTaGACACAGGAAGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLGKAF*TQEGME
Trigger: CTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAAG...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGGCAGAACTTTCAGGGCAGGAGAGAACCTGTGCAGATTCCAGTTCATTTCTGTAAGGGGGCAAGTGTGTaGGAGCAGTGGCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RQNFQGRREPVQIPVHFCKGASV*EQWLRA
Trigger: GGCTCTCAGCCACTGCTCCAACACACTTGCCCCCTT...ACAGAAATGAACTGGAATCTGCACAGGTTCTCTCCTGCCCTGAAAGTTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCGAGGCCCTCAAGTCTTaGTGGACAAAGGAGGATAAG +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSEALKS*WTKEDK
Trigger: CTTATCCTCCTTTGTCCACAAAGACTTGAGGGCCTC...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACATGACTCCCCCTCGGAGACAAAGCCAGGGCTGGAAGCTGTGTCTTCAGAGCCCCTTTCATTTTACCTaGGGTCAAGTGCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: NMTPPRRQSQGWKLCLQSPFHFT*GQVHSC
Trigger: GCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGG...GCTCTGAAGACACAGCTTCCAGCCCTGGCTTTGTCTCCGAGGGGGAGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTTGGACTCTCCATTCTaGCTTCACAAGCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSLDSPF*LHKPSP
Trigger: CGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCAA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGGGTGGGCAGCAAAGTaGAGCAGGGTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDGWAAK*SRVFSS
Trigger: GGAGGAGAAGACCCTGCTCAACTTTGCTGCCCACCC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTGTCCCAGACAAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATGGCGTAGGCGAACACACACATaGCAAATGCTGCTACATCCA +
Preference number: 5 (lower is better)
Translates to: PVPDKPLASTPSSHFRWRRRTHT*QMLLHP
Trigger: TGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCT...ACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTTGTCTGGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTTTACACTCGAACTCCTaGTCGTACTGGCCGCTCACG +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNILHSNS*SYWPLT
Trigger: CGTGAGCGGCCAGTACGACAAGGAGTTCGAGTGTAA...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTTACACTCGAACTCCTaGTCGTACTGGCCGCTCACG +
Preference number: 5 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGLHSNS*SYWPLT
Trigger: CGTGAGCGGCCAGTACGACAAGGAGTTCGAGTGTAA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTACGGTGAAGTTGGTCTaGTCCTTCTCCGGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGTVKLV*SFSGSY
Trigger: GTACGACCCGGAGAAGGACAAGACCAACTTCACCGT...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTACGGTGAAGTTGGTCTaGTCCTTCTCCGGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLTVKLV*SFSGSY
Trigger: GTACGACCCGGAGAAGGACAAGACCAACTTCACCGT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCGCTGATGTCAGGATGTaGTTCATCCGTGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAADVRM*FIRGFS
Trigger: AGAGAAGCCACGGATGAACAACATCCTGACATCAGC...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGAATACTTGCTGGGGTaGGTCTTTACTGCAGACTCG +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGEYLLG*VFTADS
Trigger: CGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACGGGGGTATGGCTTTTaGGGCAAAGGTGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTRGYGF*GKGGPP
Trigger: GGGTGGGCCACCTTTGCCCAAAAAGCCATACCCCCG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGAGGAGCAAGAGCGATaGCTCTTGGTCCTGGGTCTA +
Preference number: 5 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGEEQER*LLVLGL
Trigger: TAGACCCAGGACCAAGAGCAATCGCTCTTGCTCCTC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCTCGCCTGGAGGACCTTaGTTTGCTTTTGCTAATAGG +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSSPGGP*FAFANR
Trigger: CCTATTAGCAAAAGCAAACAAAGGTCCTCCAGGCGA...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGGGTTTCCTGTTCCTGTaGGGAGGCACACCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMGFLFL*GGTPCR
Trigger: TCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACC...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGGTTTCCTGTTCCTGTaGGGAGGCACACCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDGFLFL*GGTPCR
Trigger: TCTGCAGGGTGTGCCTCCCAACAGGAACAGGAAACC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTTTGATGTGGCTTTGCTaGTTCCATGAAGATGGATGG +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCLMWLC*FHEDGW
Trigger: CCATCCATCTTCATGGAACAAGCAAAGCCACATCAA...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCAGCTTCAGACCACAGTCAAGCAAGGGTCTCTCTGCTGACAGAACCTGCAGCATCTGCTACGTGAACTaGCCTATTGATGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GSFRPQSSKGLSADRTCSICYVN*PIDVAL
Trigger: CAAAGCCACATCAATAGGCAAGTTCACGTAGCAGAT...GCTGCAGGTTCTGTCAGCAGAGAGACCCTTGCTTGACTGTGGTCTGAAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGGCAGGCACCTTCTGGAGTCCGAGTGATTGGCAGCCCTTTCATTTTACCTTGGCCTCAGTGTCCAGACTaGGTCTTCAGGACACATATT +
Preference number: 5 (lower is better)
Translates to: GQAPSGVRVIGSPFILPWPQCPD*VFRTHI
Trigger: AATATGTGTCCTGAAGACCAAGTCTGGACACTGAGG...CCAAGGTAAAATGAAAGGGCTGCCAATCACTCGGACTCCAGAAGGTGCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCTTGGACTCTCCATTCTaGCTTCACAAGCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALDSPF*LHKPSP
Trigger: CGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCAA...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCAGGTACCCCAGTGCCTGCACAAAGGGATGATGCTGTGGGGACCTGCCCAGTTGGAAGGTTAATGTGTTaGCTGATTTACAAGATGGGT +
Preference number: 5 (lower is better)
Translates to: PGTPVPAQRDDAVGTCPVGRLMC*LIYKMG
Trigger: ACCCATCTTGTAAATCAGCAAACACATTAACCTTCC...AACTGGGCAGGTCCCCACAGCATCATCCCTTTGTGCAGGCACTGGGGTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCATCCGTGGCTTCTCCTaGGTGTGTCCTCTTCCTAAT +
Preference number: 5 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPAIRGFS*VCPLPN
Trigger: ATTAGGAAGAGGACACACCAAGGAGAAGCCACGGAT...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAGTGTGCTATGGGGATaGGTCCCTGTTGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGSVLWG*VPVVLR
Trigger: TCTTAAGACAACAGGGACCAATCCCCATAGCACACT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGACAAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATGGCGTTCCCTAGGGTTTCCACTGTACCCTaGGTGTGTCCTCTTCCTAAT +
Preference number: 5 (lower is better)
Translates to: RQASGLHTIFSFQMAFPRVSTVP*VCPLPN
Trigger: ATTAGGAAGAGGACACACCAAGGGTACAGTGGAAAC...CCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp CTGTCCCAGACAAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATGGCGTTAAACAAAAGACAGAATaGAGGAGGAGTCCATGCCCC +
Preference number: 5 (lower is better)
Translates to: LSQTSLWPPHHLLISDGVKQKTE*RRSPCP
Trigger: GGGGCATGGACTCCTCCTCAATTCTGTCTTTTGTTT...AACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTTGTCTGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp TCCTGTCAGAAGCCACGCATGTCACCAGGACAAGCTGCCATGGAACCACCCCACATATTGCACAGTTCCTaGTTTACTCACACAAGACAC +
Preference number: 5 (lower is better)
Translates to: SCQKPRMSPGQAAMEPPHILHSS*FTHTRH
Trigger: GTGTCTTGTGTGAGTAAACAAGGAACTGTGCAATAT...GTGGGGTGGTTCCATGGCAGCTTGTCCTGGTGACATGCGTGGCTTCTGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACATGCAGGATGCGAATGTaGAGCCCGAGACCCCGCACA +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTCRMRM*SPRPRT
Trigger: TGTGCGGGGTCTCGGGCTCAACATTCGCATCCTGCA...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTCTAGGAGGAATAAAGTaGCAGGGAGGATGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNILGGIK*QGGCGG
Trigger: TCCCCCACATCCTCCCTGCAACTTTATTCCTCCTAG...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTAAATGTGGGACTGAATaGGAGCAAGTCTGTAGACCT +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPKCGTE*EQVCRP
Trigger: AGGTCTACAGACTTGCTCCAATTCAGTCCCACATTT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTATCTGCTACGTGAACTaGCCTATTGATGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPICYVN*PIDVAL
Trigger: CAAAGCCACATCAATAGGCAAGTTCACGTAGCAGAT...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGGAGCTTCAGGGGACTaGCTAGTGGCAGGAACCAAA +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDGASGD*LVAGTK
Trigger: TTTGGTTCCTGCCACTAGCAAGTCCCCTGAAGCTCC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATGATATTCCTCCATGCTaGGAGACTCAGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDDIPPC*ETQEAL
Trigger: GAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATC...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTGAAAATGGATTGAGTTaGATGGCAGGGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPENGLS*MAGMLA
Trigger: TGCCAACATCCCTGCCATCAAACTCAATCCATTTTC...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGGAATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCACCACCGGCGTGTTCTCTTaGGGAGAGGTATCGATAGCC +
Preference number: 5 (lower is better)
Translates to: RNNSQEANTHIANAATSTTGVFS*GEVSIA
Trigger: GGCTATCGATACCTCTCCCAAAGAGAACACGCCGGT...GGTGGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTTGGCAACGGCTTCTGTaGGGACATCTGGATGACATT +
Preference number: 5 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGWQRLL*GHLDDI
Trigger: AATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCA...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTGGCAACGGCTTCTGTaGGGACATCTGGATGACATT +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLWQRLL*GHLDDI
Trigger: AATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACTGGGTCTAAGTGTATaGGACCAGGCCATCGGGGCT +
Preference number: 5 (lower is better)
Translates to: LPSFLASRPKGEAEEILELGLSV*DQAIGA
Trigger: AGCCCCGATGGCCTGGTCCAATACACTTAGACCCAG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTGGGATGAGAAATGTCTaGGAATCAACTCATCAACAA +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCGMRNV*ESTHQQ
Trigger: TTGTTGATGAGTTGATTCCAAGACATTTCTCATCCC...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTGAGGCCCTCAAGTCTTaGTGGACAAAGGAGGATAAG +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNIEALKS*WTKEDK
Trigger: CTTATCCTCCTTTGTCCACAAAGACTTGAGGGCCTC...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGAAAATGGATTGAGTTaGATGGCAGGGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGENGLS*MAGMLA
Trigger: TGCCAACATCCCTGCCATCAAACTCAATCCATTTTC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTTTGGACTCTCCATTCTaGCTTCACAAGCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLLDSPF*LHKPSP
Trigger: CGGTGAAGGCTTGTGAAGCAAGAATGGAGAGTCCAA...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AACACACACATTGCAAATGCTGCTACATCCACCGGCAGTTTTCCACCACACTCCAGTGTGCTATGGGGATaGGTCCCTGTTGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: NTHIANAATSTGSFPPHSSVLWG*VPVVLR
Trigger: TCTTAAGACAACAGGGACCAATCCCCATAGCACACT...GGAGTGTGGTGGAAAACTGCCGGTGGATGTAGCAGCATTTGCAATGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGCAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLQERLL*VLGLSV
Trigger: TACACTTAGACCCAGGACCAAGAGCAATCGCTCTTG...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GCGATTGCTCTTGGTCCTGGGTCTAAGTGTATTGGACCAGGCCATCGGGGCTGTAGAAAAGAATCATTATaGTGCTTATGGACACAGCAG +
Preference number: 5 (lower is better)
Translates to: AIALGPGSKCIGPGHRGCRKESL*CLWTQQ
Trigger: CTGCTGTGTCCATAAGCACAATAATGATTCTTTTCT...ACAGCCCCGATGGCCTGGTCCAATACACTTAGACCCAGGACCAAGAGCAATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTGCCCTGGAGGACCTTTGTTaGCTTTTGCTAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: PCLGAEKLLSRNFCLGPALEDLC*LLLIGL
Trigger: AAGACCTATTAGCAAAAGCAAACAAAGGTCCTCCAG...GGCAGGACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGAATAAGGGCACTGCTGTaGGATCTGACTGTTTTTAGG +
Preference number: 5 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRIRALL*DLTVFR
Trigger: CCTAAAAACAGTCAGATCCAACAGCAGTGCCCTTAT...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATGTTGGCATGGATATTCCTCCATGCTTGGAGACTCAGGAGGCCCTCAAGTCTTAAGGAGAGGGAAATCTaGGGCTTTAGGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: MLAWIFLHAWRLRRPSSLKEREI*GFRLPL
Trigger: CAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTT...AAGACTTGAGGGCCTCCTGAGTCTCCAAGCATGGAGGAATATCCATGCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCTTGGCAAAGCCTTTTaGACACAGGAAGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDLGKAF*TQEGME
Trigger: CTCCATGCCTTCCTGTGTCAAAAAGGCTTTGCCAAG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTCCTCAGTGTCCAGACTaGGTCTTCAGGACACATATT +
Preference number: 5 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGPQCPD*VFRTHI
Trigger: AATATGTGTCCTGAAGACCAAGTCTGGACACTGAGG...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CAAACTTCATGCCCTTATGGGCCAACCTCCAGACCTTTCTCTCCAGCCAGCTCCAGAAAAGAATCATTATaGTGCTTATGGACACAGCAG +
Preference number: 5 (lower is better)
Translates to: QTSCPYGPTSRPFSPASSRKESL*CLWTQQ
Trigger: CTGCTGTGTCCATAAGCACAATAATGATTCTTTTCT...GGAGCTGGCTGGAGAGAAAGGTCTGGAGGTTGGCCCATAAGGGCATGAAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTAAATGTGGGACTGAATaGGAGCAAGTCTGTAGACCT +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNIKCGTE*EQVCRP
Trigger: AGGTCTACAGACTTGCTCCAATTCAGTCCCACATTT...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CATCCTCCTTGTCTGGGGGCTGAAAAGCTGCTCTCTAGAAACTTCTGTCTAGGTTTGATGTGGCTTTGCTaGTTCCATGAAGATGGATGG +
Preference number: 5 (lower is better)
Translates to: HPPCLGAEKLLSRNFCLGLMWLC*FHEDGW
Trigger: CCATCCATCTTCATGGAACAAGCAAAGCCACATCAA...ACCTAGACAGAAGTTTCTAGAGAGCAGCTTTTCAGCCCCCAGACAAGGAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTGGGTTATCATGACATTCATTGCCACACAACAGCCTGTGAACACGTTCCTCTGAAGGAGAGGGAAATCTaGGGCTTTAGGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: VGYHDIHCHTTACEHVPLKEREI*GFRLPL
Trigger: CAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTT...CAGAGGAACGTGTTCACAGGCTGTTGTGTGGCAATGAATGTCATGATAACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGAGGGGAGGAGAAATTaGAATTGGGGGCAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTEGRRN*NWGQGW
Trigger: CCAACCTTGCCCCCAATTCAAATTTCTCCTCCCCTC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGAAAATGGATTGAGTTaGATGGCAGGGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SWALGFLCEQEGGFYCKGENGLS*MAGMLA
Trigger: TGCCAACATCCCTGCCATCAAACTCAATCCATTTTC...ACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCCCTTTCATTTTACCTaGGGTCAAGTGCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMPFHFT*GQVHSC
Trigger: GCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCACACAATGCGCTTTCTaGAAAATACTCCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGTQCAF*KILQSK
Trigger: TTTGCTCTGGAGTATTTTCAAGAAAGCGCATTGTGT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ATCCCCCTAAGATCCAGGGTGATGGTTTCCTGTTCCTGTTGGGAGGCACACCCTTTGAATATCACAAACTaGGACTCTCCATTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: IPLRSRVMVSCSCWEAHPLNITN*DSPFLL
Trigger: AAGCAAGAATGGAGAGTCCAAGTTTGTGATATTCAA...AGGGTGTGCCTCCCAACAGGAACAGGAAACCATCACCCTGGATCTTAGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCGGAAGGTTAATGTGTTaGCTGATTTACAAGATGGGT +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGGRLMC*LIYKMG
Trigger: ACCCATCTTGTAAATCAGCAAACACATTAACCTTCC...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGACAAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATGGCGTTCCCTAGGAACACTCGTAGGACCTaGTTTAAACAAAAGACAGAA +
Preference number: 5 (lower is better)
Translates to: RQASGLHTIFSFQMAFPRNTRRT*FKQKTE
Trigger: TTCTGTCTTTTGTTTAAACAAGGTCCTACGAGTGTT...CCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGAATACTTGCTGGGGTaGGTCTTTACTGCAGACTCG +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTEYLLG*VFTADS
Trigger: CGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACACAAGAGCGATTGCTCTaGGTCCTGGGTCTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTQERLL*VLGLSV
Trigger: TACACTTAGACCCAGGACCAAGAGCAATCGCTCTTG...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp ACAAGGAGAGGGAAATCTTGGGCTTTAGGCTTCCTTTGTGAGCAGGAGGGAGGCAGAAAAGAATCATTATaGTGCTTATGGACACAGCAG +
Preference number: 5 (lower is better)
Translates to: TRRGKSWALGFLCEQEGGRKESL*CLWTQQ
Trigger: CTGCTGTGTCCATAAGCACAATAATGATTCTTTTCT...GCCTCCCTCCTGCTCACAAAGGAAGCCTAAAGCCCAAGATTTCCCTCTCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATATAAGGGCACTGCTGTaGGATCTGACTGTTTTTAGG +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDIRALL*DLTVFR
Trigger: CCTAAAAACAGTCAGATCCAACAGCAGTGCCCTTAT...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGCCTCCACACCATCTTCTCATTTCAGATGGCGTTCCCTAGGCAACCTCTGTATCAACAGAATTCACATTaGATCTATAACAGCACACAG +
Preference number: 5 (lower is better)
Translates to: GLHTIFSFQMAFPRQPLYQQNSH*IYNSTQ
Trigger: CTGTGTGCTGTTATAGATCAAATGTGAATTCTGTTG...ATACAGAGGTTGCCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGCTGGAGGACCTTTGTTaGCTTTTGCTAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMLEDLC*LLLIGL
Trigger: AAGACCTATTAGCAAAAGCAAACAAAGGTCCTCCAG...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AGTGCAGAACTGAGGGCAGGTAAAACCCCATTTATAAGGGCACTGCTGTTGGATCTGGAGGACCTTTGTTaGCTTTTGCTAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SAELRAGKTPFIRALLLDLEDLC*LLLIGL
Trigger: AAGACCTATTAGCAAAAGCAAACAAAGGTCCTCCAG...ATCCAACAGCAGTGCCCTTATAAATGGGGTTTTACCTGCCCTCAGTTCTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAACCCTTTCATTTTACCTaGGGTCAAGTGCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: LPSFLASRPKGEAEEILEPFHFT*GQVHSC
Trigger: GCAACTGTGCACTTGACCCAAGGTAAAATGAAAGGG...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CCTGGGGACCAGCCCTTAAGAAGGTTTATGTGTCTGTTGGGAGGAAAGCAGAGATTGAATATCACAAACTaGGACTCTCCATTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: PGDQPLRRFMCLLGGKQRLNITN*DSPFLL
Trigger: AAGCAAGAATGGAGAGTCCAAGTTTGTGATATTCAA...TCTCTGCTTTCCTCCCAACAGACACATAAACCTTCTTAAGGGCTGGTCCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAATAAGGGCACTGCTGTaGGATCTGACTGTTTTTAGG +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTIRALL*DLTVFR
Trigger: CCTAAAAACAGTCAGATCCAACAGCAGTGCCCTTAT...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAAAATGTGGGACTGAATaGGAGCAAGTCTGTAGACCT +
Preference number: 5 (lower is better)
Translates to: LPSFLASRPKGEAEEILEKCGTE*EQVCRP
Trigger: AGGTCTACAGACTTGCTCCAATTCAGTCCCACATTT...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGAGGAGAAATTTGAATaGGGGGCAAGGTTGGAACTT +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTEEKFE*GARLEL
Trigger: AAGTTCCAACCTTGCCCCCAATTCAAATTTCTCCTC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp TCCTTTGTGAGCAGGAGGGAGGCTTTTACTGTAAGGGTGGATGGTACTTCTATGACACAATGCGCTTTCTaGAAAATACTCCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SFVSRREAFTVRVDGTSMTQCAF*KILQSK
Trigger: TTTGCTCTGGAGTATTTTCAAGAAAGCGCATTGTGT...CATAGAAGTACCATCCACCCTTACAGTAAAAGCCTCCCTCCTGCTCACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GTCTTCTCCTCCCTCAGGAGGGAGAGCATTAAGGAAACACACAGCCACAACATTTTGAATATCACAAACTaGGACTCTCCATTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VFSSLRRESIKETHSHNILNITN*DSPFLL
Trigger: AAGCAAGAATGGAGAGTCCAAGTTTGTGATATTCAA...AATGTTGTGGCTGTGTGTTTCCTTAATGCTCTCCCTCCTGAGGGAGGAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp AAAAGGAATAATAGCCAAGAGGCGAACACACACATTGCAAATGCTGCTACATCCAGGTTAGCTTTCATCTaGAGGCTTGAAGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: KRNNSQEANTHIANAATSRLAFI*RLEGLH
Trigger: ATGCAGACCTTCAAGCCTCAAGATGAAAGCTAACCT...GGATGTAGCAGCATTTGCAATGTGTGTGTTCGCCTCTTGGCTATTATTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAGGGATGAGAAATGTCTaGGAATCAACTCATCAACAA +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTGMRNV*ESTHQQ
Trigger: TTGTTGATGAGTTGATTCCAAGACATTTCTCATCCC...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp GGTCTTCAGGACACATATTCCAGAGTGGGTTATCATGACATTCATTGCCACACAACACAATGCGCTTTCTaGAAAATACTCCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: GLQDTYSRVGYHDIHCHTTQCAF*KILQSK
Trigger: TTTGCTCTGGAGTATTTTCAAGAAAGCGCATTGTGT...TGTGTGGCAATGAATGTCATGATAACCCACTCTGGAATATGTGTCCTGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS-3UTR CAA 90 bp CTCCCTTCATTCCTTGCTTCTAGACCCAAAGGTGAAGCAGAAGAAATCCTTGAAGGAAGGTTAATGTGTTaGCTGATTTACAAGATGGGT +
Preference number: 5 (lower is better)
Translates to: LPSFLASRPKGEAEEILEGRLMC*LIYKMG
Trigger: ACCCATCTTGTAAATCAGCAAACACATTAACCTTCC...TTCAAGGATTTCTTCTGCTTCACCTTTGGGTCTAGAAGCAAGGAATGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGAAAGGCCGTCCGCTCCGGGGACAGCAGCGGGTCCTaGGAGTGCAGGCGCTCCGTGGAGAGCAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: GKAVRSGDSSGS*ECRRSVESSCS
Trigger: CGAGCAGCTGCTCTCCACGGAGCGCCTGCACTCCCAGGACCCGCTGCTGTCCCCGGAGCGGACGGCCTTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CAA 90 bp GGCCCGGATGGGCCGGCGGGGTCGTTCCCTTGGCAACGGCTTCTGTaGGGACATCTGGATGACATTGAGGGGGAGGGTGCCGCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: GPDGPAGSFPWQRLL*GHLDDIEGEGAAGS
Trigger: GCTGCCCGCGGCACCCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCCGGCCCATCCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGGACAGCAGCGGGTCCTGGGAGTGCAGGCGCTCCGTaGAGAGCAGCTGCTCGTCGGACAGGATGCGGTCGT +
Preference number: 6 (lower is better)
Translates to: GTAAGPGSAGAP*RAAARRTGCGR
Trigger: ACGACCGCATCCTGTCCGACGAGCAGCTGCTCTCCACGGAGCGCCTGCACTCCCAGGACCCGCTGCTGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 72 bp AAGACGTCCGTGTGCGAGATGGCCCTGGACAGCGACTaGTCGGGAAAGGCCGTCCGCTCCGGGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: KTSVCEMALDSD*SGKAVRSGDSS
Trigger: GCTGCTGTCCCCGGAGCGGACGGCCTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CAA 72 bp GGGTCGTACTTGTTCTCGGGCCCCGGCGACACCACCTaGGTGCTGGGCGTCTGTACCCACACCGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GSYLFSGPGDTT*VLGVCTHTGLW
Trigger: CCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGTACGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGTCGTACTTGTTCTCGGGCCCCGGCGACACCACCTTaGTGCTGGGCGTCTGTACCCACACCGGGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GRTCSRAPATPP*CWASVPTPGSG
Trigger: ACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGTACGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 72 bp GCTGCTCGTCGGACAGGATGCGGTCGTAGGGCATGCTaGACTCATCTGGCAGGCCCCGATCCGGGGACAGGA +
Preference number: 6 (lower is better)
Translates to: AARRTGCGRRAC*THLAGPDPGTG
Trigger: TCCTGTCCCCGGATCGGGGCCTGCCAGATGAGTTCAGCATGCCCTACGACCGCATCCTGTCCGACGAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 72 bp CGTACTTGTTCTCGGGCCCCGGCGACACCACCTTGGTaGTGGGCGTCTGTACCCACACCGGGCTCTGGTAGT +
Preference number: 6 (lower is better)
Translates to: RTCSRAPATPPW*WASVPTPGSGS
Trigger: ACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGTACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp TGCTGGGCGTCTGTACCCACACCGGGCTCTGGTAGTTaGTGCACTGGCGCTGGTCCAGCTTCTCGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: CWASVPTPGSGS*CTGAGPASRGA
Trigger: AGCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp ACTTGTTCTCGGGCCCCGGCGACACCACCTTGGTGCTaGGCGTCTGTACCCACACCGGGCTCTGGTAGTTGG +
Preference number: 6 (lower is better)
Translates to: TCSRAPATPPWC*ASVPTPGSGSW
Trigger: CCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGCCGGCGGGGTCGTTCCCTTGGCAACGGCTTCTGTTaGGACATCTGGATGACATTGAGGGGGAGGGTGCCG +
Preference number: 6 (lower is better)
Translates to: GRRGRSLGNGFC*DIWMTLRGRVP
Trigger: CGGCACCCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCCGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGACAGGATGCGGTCGTAGGGCATGCTGAACTCATCTaGCAGGCCCCGATCCGGGGACAGGACCCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GQDAVVGHAELI*QAPIRGQDPVL
Trigger: CAGGACAGGGTCCTGTCCCCGGATCGGGGCCTGCCAGATGAGTTCAGCATGCCCTACGACCGCATCCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GTGTGGACACAAAGACGTCCGTGTGCGAGATGGCCCTaGACAGCGACTGCTCGGGAAAGGCCGTCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: VWTQRRPCARWP*TATARERPSAP
Trigger: CGGAGCGGACGGCCTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GCACGGGTGTGGACACAAAGACGTCCGTGTGCGAGATaGCCCTGGACAGCGACTGCTCGGGAAAGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: ARVWTQRRPCAR*PWTATARERPS
Trigger: GGACGGCCTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCACACCCGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CAA 72 bp GGGCCGGCGGGGTCGTTCCCTTGGCAACGGCTTCTGTaGGGACATCTGGATGACATTGAGGGGGAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: GPAGSFPWQRLL*GHLDDIEGEGA
Trigger: GGCACCCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCCGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 72 bp TGCTCCACCGTGTTGTGTCTGCGTGAGGCAAAGGCATaGCGCTTGGCTGCCGTCTGGCTCTGGCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: CSTVLCLREAKA*RLAAVWLWPRV
Trigger: CACCCTGGGCCAGAGCCAGACGGCAGCCAAGCGTCATGCCTTTGCCTCACGCAGACACAACACGGTGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 72 bp TGGGCGTCTGTACCCACACCGGGCTCTGGTAGTTGGTaGACTGGCGCTGGTCCAGCTTCTCGTGGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: WASVPTPGSGSW*TGAGPASRGAS
Trigger: AGAAGCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCCCGGTGTGGGTACAGACGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 72 bp CGGTCCAGCACGGGTGTGGACACAAAGACGTCCGTGTaGGAGATGGCCCTGGACAGCGACTGCTCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: RSSTGVDTKTSV*EMALDSDCSGK
Trigger: CTTTCCCGAGCAGTCGCTGTCCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCACACCCGTGCTGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGTCGTTCCCTTGGCAACGGCTTCTGTTGGGACATCTaGATGACATTGAGGGGGAGGGTGCCGCGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: GRSLGNGFCWDI*MTLRGRVPRAA
Trigger: GGCTGCCCGCGGCACCCTCCCCCTCAATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCAAGGGAACGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp CCGTGTTGTGTCTGCGTGAGGCAAAGGCATGACGCTTaGCTGCCGTCTGGCTCTGGCCCAGGGTGGCGTATG +
Preference number: 6 (lower is better)
Translates to: PCCVCVRQRHDA*LPSGSGPGWRM
Trigger: CATACGCCACCCTGGGCCAGAGCCAGACGGCAGCCAAGCGTCATGCCTTTGCCTCACGCAGACACAACACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GATGTCAGCCAGAGCCCTGTGGATGTTCATCTCCCGTaGAGGGCGGTGGGCCTTGTCGTAGGAGACCTTGGC +
Preference number: 6 (lower is better)
Translates to: DVSQSPVDVHLP*RAVGLVVGDLG
Trigger: GCCAAGGTCTCCTACGACAAGGCCCACCGCCCTCCACGGGAGATGAACATCCACAGGGCTCTGGCTGACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343478.7
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GGACATGGCCCGGATGGGCCGGCGGGGTCGTTCCCTTaGCAACGGCTTCTGTTGGGACATCTGGATGACATT +
Preference number: 6 (lower is better)
Translates to: GHGPDGPAGSFP*QRLLLGHLDDI
Trigger: AATGTCATCCAGATGTCCCAACAGAAGCCGTTGCCAAGGGAACGACCCCGCCGGCCCATCCGGGCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp GCATCTTGCTCATGCGGTAGCGGTCCAGCACGGGTGTaGACACAAAGACGTCCGTGTGCGAGATGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ASCSCGSGPARV*TQRRPCARWPW
Trigger: CCAGGGCCATCTCGCACACGGACGTCTTTGTGTCCACACCCGTGCTGGACCGCTACCGCATGAGCAAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CAA 72 bp ACGGTGAAGTTGGTCTTGTCCTTCTCCGGGTCGTACTaGTTCTCGGGCCCCGGCGACACCACCTTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: TVKLVLSFSGSY*FSGPGDTTLVL
Trigger: CAGCACCAAGGTGGTGTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGAAGGACAAGACCAACTTCACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 72 bp GATGTAGTGCAGCTGCTCCACCGTGTTGTGTCTGCGTaGGGCAAAGGCATGACGCTTGGCTGCCGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: DVVQLLHRVVSA*GKGMTLGCRLA
Trigger: AGCCAGACGGCAGCCAAGCGTCATGCCTTTGCCTCACGCAGACACAACACGGTGGAGCAGCTGCACTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp CTTGCTGGGGTTGGTCTTTACTGCAGACTCGTAGGATaGGGGCAGGTGGGCCAAGTTCTGGAACGAGCGGGA +
Preference number: 6 (lower is better)
Translates to: LAGVGLYCRLVG*GQVGQVLERAG
Trigger: TCCCGCTCGTTCCAGAACTTGGCCCACCTGCCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 72 bp CGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCATCCGTGGCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: RAGEGEVIGLGG*CQDVVHPWLLW
Trigger: CCAGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409168.7
CDS CCA 72 bp CCGTCTGGCTCTGGCCCAGGGTGGCGTATGAGTTATTaGAGGCACTGGGATGAGAGTGCATCTTGCTCATGC +
Preference number: 6 (lower is better)
Translates to: PSGSGPGWRMSY*RHWDESASCSC
Trigger: GCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACGCCACCCTGGGCCAGAGCCAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS TCA 72 bp CGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCATCCGTGGCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: RAGEGEVIGLGG*CQDVVHPWLLL
Trigger: AAGGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432116.7
CDS TCA 72 bp CGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTGGCTaGTGTCAGGATGTTGTTCATCCGTGGCTTCTCATG +
Preference number: 6 (lower is better)
Translates to: RAGEGEVIGLGG*CQDVVHPWLLM
Trigger: CATGAGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441885.8
CDS CCA 72 bp GGAACGAGCGGGAGAAGGAGAGGTCATAGGGCTCGGTaGCTGATGTCAGGATGTTGTTCATCCGTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: GTSGRRRGHRAR*LMSGCCSSVAS
Trigger: AGAAGCCACGGATGAACAACATCCTGACATCAGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp TCTGGCCCAGGGTGGCGTATGAGTTATTGGAGGCACTaGGATGAGAGTGCATCTTGCTCATGCGGTAGCGGT +
Preference number: 6 (lower is better)
Translates to: SGPGWRMSYWRH*DESASCSCGSG
Trigger: ACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCATACGCCACCCTGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 72 bp TATTGGAGGCACTGGGATGAGAGTGCATCTTGCTCATaGGGTAGCGGTCCAGCACGGGTGTGGACACAAAGA +
Preference number: 6 (lower is better)
Translates to: YWRHWDESASCS*GSGPARVWTQR
Trigger: TCTTTGTGTCCACACCCGTGCTGGACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS GCA 72 bp ATGAGTTATTGGAGGCACTGGGATGAGAGTGCATCTTaGTCATGCGGTAGCGGTCCAGCACGGGTGTGGACA +
Preference number: 6 (lower is better)
Translates to: MSYWRHWDESAS*SCGSGPARVWT
Trigger: TGTCCACACCCGTGCTGGACCGCTACCGCATGAGCAAGATGCACTCTCATCCCAGTGCCTCCAATAACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp CGGTTAGCCTCTTCAGAGATGAATACTTGCTGGGGTTaGTCTTTACTGCAGACTCGTAGGATGGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: RLASSEMNTCWG*SLLQTRRMGAG
Trigger: ACCTGCCCCCATCCTACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTCTGAAGAGGCTAACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp CCTTGTCGGTTAGCCTCTTCAGAGATGAATACTTGCTaGGGTTGGTCTTTACTGCAGACTCGTAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: PCRLASSEMNTC*GWSLLQTRRMG
Trigger: CCCCATCCTACGAGTCTGCAGTAAAGACCAACCCCAGCAAGTATTCATCTCTGAAGAGGCTAACCGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CAA 72 bp TGGTTTTTGGAGGACGATCTGACCGGCGTGTTCTCTTaGGGAGAGGTATCGATAGCCGAGATAGTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: WFLEDDLTGVFS*GEVSIAEIVSL
Trigger: AAGAGAAACTATCTCGGCTATCGATACCTCTCCCAAAGAGAACACGCCGGTCAGATCGTCCTCCAAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343478.7
ENST00000409168.7
ENST00000432116.7
ENST00000441885.8
CDS CCA 72 bp AAGCCTCTGGCCTCCACACCATCTTCTCATTTCAGATaGCGTTCCCTAGGCAACCTCTGTATTTTAGTAAAA +
Preference number: 6 (lower is better)
Translates to: KPLASTPSSHFR*RSLGNLCILVK
Trigger: TTTTACTAAAATACAGAGGTTGCCTAGGGAACGCCATCTGAAATGAGAAGATGGTGTGGAGGCCAGAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343478.7