Pregenerated sensors for SHISA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000198892Ensembl transcript IDs: ENST00000362011.7, ENST00000464117.1, ENST00000481699.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGGGCCTGGTGGCTGGAGGACTCCTGCCACCCCCAGGACCAGATaGAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAA | + |
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Preference number: 1 (lower is better) Translates to: LGPGGWRTPATPRTR*RYRMRASPKVGITE Trigger: TTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCTGGTCCTGGGGGTGGCAGGAGTCCTCCAGCCACCAGGCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGACCCCCAGGACCAGATaGAGGTACAGGATGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWTPRTR*RYRMRA Trigger: TGCCCTCATCCTGTACCTGCATCTGGTCCTGGGGGT...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCAAGGTTGGCATCACTaGAGGGGCAGCAGAGACATG | + |
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Preference number: 2 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWQGWHH*RGSRDM Trigger: CATGTCTCTGCTGCCCCTTCAGTGATGCCAACCTTG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGCTACTGCCAGCTGCTaGCGGAACCTCCTCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VFRKPLGSQEQSALVCLWATASC*RNLLPP Trigger: GGGAGGGAGGAGGTTCCGTCAGCAGCTGGCAGTAGC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGGTGCTGTGCTCCGATaGTGGTGCTGGCCCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VFRKPLGSQEQSALVCLWGAVLR*WCWPSP Trigger: AGGGGAGGGCCAGCACCAGCATCGGAGCACAGCACC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGGGCTTGGCTTGGTCTaGGGCCTGGTGGCTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VFRKPLGSQEQSALVCLWGLGLV*GLVAGG Trigger: TCCTCCAGCCACCAGGCCCCAGACCAAGCCAAGCCC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGCTGTGCTCCGATGCTaGTGCTGGCCCTCCCCTACT | + |
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Preference number: 2 (lower is better) Translates to: VFRKPLGSQEQSALVCLWAVLRC*CWPSPT Trigger: AGTAGGGGAGGGCCAGCACCAGCATCGGAGCACAGC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGTGCTCCGATGCTGGTaGTGGCCCTCCCCTACTTTT | + |
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Preference number: 2 (lower is better) Translates to: VFRKPLGSQEQSALVCLWVLRCW*WPSPTF Trigger: AAAAGTAGGGGAGGGCCAGCACCAGCATCGGAGCAC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR CAA 90 bp | CTCATTGTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTaGGTCTGCTTGTGGATGGGGGTGAGGATGGTGCTGTGCTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: LIVFRKPLGSQEQSA*VCLWMGVRMVLCSD Trigger: ATCGGAGCACAGCACCATCCTCACCCCCATCCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGACAATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGGGCCCCAGCCTTCCTaGCTGGGATCTTGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSGPQPS*LGSWEQ Trigger: CTGCTCCCAAGATCCCAGCCAGGAAGGCTGGGGCCC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGCTTGTGGATGGGGGTaGGGATGGTGCTGTGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSACGWG*GWCCAP Trigger: CGGAGCACAGCACCATCCTCACCCCCATCCACAAGC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCACCCAGCCTTCCTGGCTaGGATCTTGGGAGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSPSLPG*DLGSRG Trigger: CCCTCTGCTCCCAAGATCCCAGCCAGGAAGGCTGGG...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGAGTGGGCAACAGTCTaGGCCCAGCTGAAGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSEWATV*AQLKAV Trigger: CACCGCCTTCAGCTGGGCCCAGACTGTTGCCCACTC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGCCCTCCCCTACTTTTaGAATATGGAGTGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: VFRKPLGSQEQSALVCLWALPYF*NMEWAT Trigger: TGTTGCCCACTCCATATTCCAAAAGTAGGGGAGGGC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAAGAGAGGAGGGCTACTaGCAGCTGCTGACGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSREEGY*QLLTEP Trigger: AGGTTCCGTCAGCAGCTGGCAGTAGCCCTCCTCTCT...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAAGGAACAGTCCGCCTTaGTCTGCTTGTGGATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSRNSPP*SACGWG Trigger: CCCCCATCCACAAGCAGACCAAGGCGGACTGTTCCT...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGATGCAGGTACAGGATaGGGGCATCTCCCAAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSDAGTG*GHLPRL Trigger: CAACCTTGGGAGATGCCCTCATCCTGTACCTGCATC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCATCCTGGCTGGGATCTTaGGAGCAGAGGGACTATTTG | + |
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Preference number: 2 (lower is better) Translates to: QGISVVQTSISSELWQNSSWLGS*EQRDYL Trigger: CAAATAGTCCCTCTGCTCCCAAGATCCCAGCCAGGA...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR GCA 72 bp | GGTGGCTGGAGGACTCCTGCCACCCCCAGGACCAGATaGAGGTACAGGATGAGGGCATCTCCCAAGGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: GGWRTPATPRTR*RYRMRASPKVG Trigger: GCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCTGGTCCTGGGGGTGGCAGGAGTCCTCCAGCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR GCA 72 bp | TTGGCTTGGTCTGGGGCCTGGTGGCTGGAGGACTCCTaGCACCCCCAGGACCAGATGCAGGTACAGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: LAWSGAWWLEDS*HPQDQMQVQDE Trigger: CTCATCCTGTACCTGCATCTGGTCCTGGGGGTGGCAGGAGTCCTCCAGCCACCAGGCCCCAGACCAAGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR CCA 72 bp | CTCCCCTACTTTTGGAATATGGAGTGGGCAACAGTCTaGGCCCAGCTGAAGGCGGTGTTCCTGGAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LPYFWNMEWATV*AQLKAVFLEGV Trigger: CACACCTTCCAGGAACACCGCCTTCAGCTGGGCCCAGACTGTTGCCCACTCCATATTCCAAAAGTAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGAGCAGAGGGACTATTaGAAAACAGGCACTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: VFRKPLGSQEQSALVCLWEQRDY*KTGTVT Trigger: GGTCACAGTGCCTGTTTTCAAATAGTCCCTCTGCTC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| 3UTR-3UTR CAA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGGGCATCTCCCAAGGTaGGCATCACTGAAGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QGISVVQTSISSELWQNSGHLPR*ASLKGQ Trigger: CTGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGACCAAGCCGGCCAGCTaGAGCTGCGGCGGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWTKPAS*SCGGAQ Trigger: CTGGGCCCCGCCGCAGCTCCAGCTGGCCGGCTTGGT...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCACCAACAGAGCGATTaGGGTGAGCGGCGCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWHQQSD*GERRGP Trigger: CGGGCCGCGCCGCTCACCGCAATCGCTCTGTTGGTG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGCTACTGCCAGCTGCTaGCGGAACCTCCTCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWATASC*RNLLPP Trigger: GGGAGGGAGGAGGTTCCGTCAGCAGCTGGCAGTAGC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGGTGCTGTGCTCCGATaGTGGTGCTGGCCCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWGAVLR*WCWPSP Trigger: AGGGGAGGGCCAGCACCAGCATCGGAGCACAGCACC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGTGGTCTGGGGCCTGGTaGCTGGAGGACTCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWWSGAW*LEDSCH Trigger: GTGGCAGGAGTCCTCCAGCCACCAGGCCCCAGACCA...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGGGCTTGGCTTGGTCTaGGGCCTGGTGGCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWGLGLV*GLVAGG Trigger: TCCTCCAGCCACCAGGCCCCAGACCAAGCCAAGCCC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGGGCCCCAGCCTTCCTaGCTGGGATCTTGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWGPQPS*LGSWEQ Trigger: CTGCTCCCAAGATCCCAGCCAGGAAGGCTGGGGCCC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCAGTCTGGGCCCAGCTaGAGGCGGTGTTCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWQSGPS*RRCSWK Trigger: CTTCCAGGAACACCGCCTTCAGCTGGGCCCAGACTG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCTCCTGGCCTTCAAATaGGCTCTGGAGCTGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWLLAFK*ALELLA Trigger: CGCCAGCAGCTCCAGAGCCCATTTGAAGGCCAGGAG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGTGCAGGGTTGTAGACTaGGGGCCCAGCTGGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWCRVVD*GPSWVE Trigger: CTCTACCCAGCTGGGCCCCCAGTCTACAACCCTGCA...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGATGCAGGTACAGGATaGGGGCATCTCCCAAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWDAGTG*GHLPRL Trigger: CAACCTTGGGAGATGCCCTCATCCTGTACCTGCATC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGAGGCAGTGCTTCTGCTaGCTCTCGGTGATAAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWRQCFC*LSVISK Trigger: CTTGCTTATCACCGAGAGGCAGCAGAAGCACTGCCT...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAAATGGGCTCTGGAGCTaGTGGCGCCGGCGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGANGLWS*WRRRYR Trigger: CCTGTACCGCCGGCGCCAGCAGCTCCAGAGCCCATT...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCTGGCTGCACTGGGATaGCTGTCATTGGAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWLAALG*LSLESP Trigger: AGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGTCATTGGAATCTCCTaGCCTTCAAATGGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWVIGIS*PSNGLW Trigger: CCAGAGCCCATTTGAAGGCCAGGAGATTCCAATGAC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCACCCAGCCTTCCTGGCTaGGATCTTGGGAGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAPSLPG*DLGSRG Trigger: CCCTCTGCTCCCAAGATCCCAGCCAGGAAGGCTGGG...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAGAGTGGGCAACAGTCTaGGCCCAGCTGAAGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAEWATV*AQLKAV Trigger: CACCGCCTTCAGCTGGGCCCAGACTGTTGCCCACTC...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGGCCCTCCCCTACTTTTaGAATATGGAGTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWALPYF*NMEWAT Trigger: TGTTGCCCACTCCATATTCCAAAAGTAGGGGAGGGC...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAGGGGTCCTGGGGGTATaGGTATACTGGCTGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAGVLGV*VYWLHW Trigger: CCAGTGCAGCCAGTATACCCATACCCCCAGGACCCC...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCCTACTTTTGGAATATaGAGTGGGCAACAGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWPTFGI*SGQQSG Trigger: CCCAGACTGTTGCCCACTCCATATTCCAAAAGTAGG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAGCAAGGTCAGGTCCCTaGAGCAGTACCGATGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAARSGP*SSTDGS Trigger: GCTACCATCGGTACTGCTGCAGGGACCTGACCTTGC...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAACCCCCAGGACCAGATaGAGGTACAGGATGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGATPRTR*RYRMRA Trigger: TGCCCTCATCCTGTACCTGCATCTGGTCCTGGGGGT...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAAGAGAGGAGGGCTACTaGCAGCTGCTGACGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAREEGY*QLLTEP Trigger: AGGTTCCGTCAGCAGCTGGCAGTAGCCCTCCTCTCT...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGTGAGGATGGTGCTGTaGTCCGATGCTGGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWVRMVL*SDAGAG Trigger: GCCAGCACCAGCATCGGAGCACAGCACCATCCTCAC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGCAGTCCGCCTTGGTCTaGTTGTGGATGGGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWQSALV*LWMGVR Trigger: CCTCACCCCCATCCACAAGCAGACCAAGGCGGACTG...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCACCAGCTTTGGGGTCCTaGGGGTATGGGTATACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAPALGS*GYGYTG Trigger: GCCAGTATACCCATACCCCCAGGACCCCAAAGCTGG...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGACTGGGGGCCCAGCTaGGTAGAGTGGATATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWDWGPS*VEWILG Trigger: CCCCAATATCCACTCTACCCAGCTGGGCCCCCAGTC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCACGGGTAAGAGGGCTGTaGTGGCATATAGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGARVRGL*WHIGRR Trigger: CCTCCTCCCTATATGCCACCACAGCCCTCTTACCCG...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAAGGAACAGTCCGCCTTaGTCTGCTTGTGGATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGARNSPP*SACGWG Trigger: CCCCCATCCACAAGCAGACCAAGGCGGACTGTTCCT...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGCTATGGTCTTGGGGCTaGAGGCCAGGCAGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWLWSWG*RPGSAS Trigger: AGAAGCACTGCCTGGCCTTCAGCCCCAAGACCATAG...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGATAGGGAGGAGGAGCTaGAGGGTTGTAGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWIGRRS*RVVDWG Trigger: CCCCCAGTCTACAACCCTGCAGCTCCTCCTCCCTAT...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGCCCAGCTGGGTAGAGTaGATATTGGGGAGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWPSWVE*ILGSRT Trigger: GGTCCTGCTCCCCAATATCCACTCTACCCAGCTGGG...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGCTCCGATGCTGGTGCTaGCCCTCCCCTACTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWLRCWC*PSPTFG Trigger: TCCAAAAGTAGGGGAGGGCCAGCACCAGCATCGGAG...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGCAAGGTTGGCATCACTaGAGGGGCAGCAGAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWQGWHH*RGSRDM Trigger: CATGTCTCTGCTGCCCCTTCAGTGATGCCAACCTTG...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAAGAGGAAGCAGCAGATaGTGGTGGCAACCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGARGSSR*WWQPQQ Trigger: TTGCTGTGGTTGCCACCACCATCTGCTGCTTCCTCT...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGGGGTATGGGTATACTaGCTGCACTGGGATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWGVWVY*LHWDAC Trigger: ACAGGCATCCCAGTGCAGCCAGTATACCCATACCCC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGTAAGAGGGCTGTGGTaGCATATAGGGAGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWVRGLW*HIGRRS Trigger: GCTCCTCCTCCCTATATGCCACCACAGCCCTCTTAC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGAAAGAGGATCACAGCTaGGGCGATGCCTGCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWKEDHS*GDACYG Trigger: ACCATAGCAGGCATCGCCTCAGCTGTGATCCTCTTT...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAAGCAGCAGATGGTGGTaGCAACCACAGCAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGASSRWW*QPQQQR Trigger: TCTTTGTTGCTGTGGTTGCCACCACCATCTGCTGCT...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCACCTTCAAATGGGCTCTaGAGCTGCTGGCGCCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSPSNGL*SCWRRR Trigger: CCGCCGGCGCCAGCAGCTCCAGAGCCCATTTGAAGG...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGTCCTGGCTGGGATCTTaGGAGCAGAGGGACTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWSWLGS*EQRDYL Trigger: CAAATAGTCCCTCTGCTCCCAAGATCCCAGCCAGGA...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCATATGGGTATACTGGCTaGACTGGGATGCCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RCRYRMRASPKVGITEGAYGYTG*TGMPVI Trigger: AATGACAGGCATCCCAGTGCAGCCAGTATACCCATA...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGTGCAGGGCCAGCTTTaGGGTCCTGGGGGTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSVQGQL*GPGGMG Trigger: ACCCATACCCCCAGGACCCCAAAGCTGGCCCTGCAC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCACAGAGATGTGGCCAGTaGGGCAGCCAGAGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSQRCGQ*GSQRGG Trigger: CCCTCCTCTCTGGCTGCCCCACTGGCCACATCTCTG...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGCTGTGCTCCGATGCTaGTGCTGGCCCTCCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSAVLRC*CWPSPT Trigger: AGTAGGGGAGGGCCAGCACCAGCATCGGAGCACAGC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCACTGAAGGCCAGGCAGTaGTTCTGCTGCCTCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSLKARQ*FCCLSV Trigger: CACCGAGAGGCAGCAGAAGCACTGCCTGGCCTTCAG...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGTGGGATGCCTGTCATTaGAATCTCCTGGCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWWDACH*NLLAFK Trigger: TTTGAAGGCCAGGAGATTCCAATGACAGGCATCCCA...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCACAGTTAAACCCCGGATaGCAGGAGCCATTCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSQLNPG*QEPFRS Trigger: GGACCGGAATGGCTCCTGGCATCCGGGGTTTAACTG...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGCCAGGCAGTGCTTCTaGTGCCTCTCGGTGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSARQCF*CLSVIS Trigger: GCTTATCACCGAGAGGCAGCAGAAGCACTGCCTGGC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR GCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGTGCTCCGATGCTGGTaGTGGCCCTCCCCTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSVLRCW*WPSPTF Trigger: AAAAGTAGGGGAGGGCCAGCACCAGCATCGGAGCAC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAAGCAGGACCACTAGGTaGGTATATGAAGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSSRTTR*VYEARL Trigger: CAGCCTGGCTTCATATACCCACCTAGTGGTCCTGCT...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR TCA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGATGATGCGACTGATATaGGTTATGTCTTTACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFRKPLGSQEQSALVCLWMMRLI*VMSLQL Trigger: AAGCTGTAAAGACATAACTCATATCAGTCGCATCAT...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCATGTTCCTGGAAGGTGTaGATGGGTCCAATGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSCSWKV*MGPMMR Trigger: TCGCATCATTGGACCCATCCACACCTTCCAGGAACA...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CCA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGTATACTGGCTGCACTaGGATGCCTGTCATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGISVVQTSISSELWQNSVYWLH*DACHWN Trigger: ATTCCAATGACAGGCATCCCAGTGCAGCCAGTATAC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS GCA 90 bp | CACAGGCAGTCCTCGCCGGCCAGCACTGCGGGCAGGGATTGGGGGTaGCCAGTGGCCACCAGGCCAGTTCATCCCCAGCCGCGCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRQSSPASTAGRDWG*PVATRPVHPQPRSA Trigger: GGCCGAGCGCGGCTGGGGATGAACTGGCCTGGTGGCCACTGGGCACCCCCAATCCCTGCCCGCAGTGCTGGCCGGCGAGGACTGCCTGTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481699.1 |
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| CDS CCA 90 bp | AGGTACCACAGGCAGTCCTCGCCGGCCAGCACTGCGGGCAGGGATTaGGGGTGCCCAGTGGCCACCAGGCCAGTTCATCCCCAGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RYHRQSSPASTAGRD*GCPVATRPVHPQPR Trigger: GCGCGGCTGGGGATGAACTGGCCTGGTGGCCACTGGGCACCCCCAATCCCTGCCCGCAGTGCTGGCCGGCGAGGACTGCCTGTGGTACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481699.1 |
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| CDS-3UTR CAA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGCAGGAACAGTCCGCCTaGGTCTGCTTGTGGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWQEQSA*VCLWMG Trigger: CCCCATCCACAAGCAGACCAAGGCGGACTGTTCCTG...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS GCA 90 bp | CAGGTCCCGCAGCAGAAGGTGAAGAACTCGCAGTTAAACCCCGGATaGCAGGAGCCATTCCGGTCCAGGTACCACAGGCAGTCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QVPQQKVKNSQLNPG*QEPFRSRYHRQSSP Trigger: CGGCGAGGACTGCCTGTGGTACCTGGACCGGAATGGCTCCTGGCATCCGGGGTTTAACTGCGAGTTCTTCACCTTCTGCTGCGGGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000362011.7 ENST00000464117.1 ENST00000481699.1 |
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| CDS-3UTR CAA 90 bp | CCAGCCCAGAGGGGACAAACAGTAGGGCCCCAGCCTTCCTGGCTGGGATCTTGGTGGGTAGAGTGGATATaGGGGAGCAGGACCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAQRGQTVGPQPSWLGSWWVEWI*GSRTTR Trigger: CCTAGTGGTCCTGCTCCCCAATATCCACTCTACCCA...CCAAGATCCCAGCCAGGAAGGCTGGGGCCCTACTGTTTGTCCCCTCTGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CAA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGGTGCAGGGCCAGCTTaGGGGTCCTGGGGGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFRKPLGSQEQSALVCLWGAGPA*GSWGYG Trigger: CCCATACCCCCAGGACCCCAAAGCTGGCCCTGCACC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS TCA 90 bp | CAGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTaGAGGGGCAGCAGAGACATGGCTGGTTCCTCAGGCTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QMQVQDEGISQGWHH*RGSRDMAGSSGSRV Trigger: TACCCGGGAGCCTGAGGAACCAGCCATGTCTCTGCTGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS GCA 90 bp | GGTGCAGGGCCAGCTTTGGGGTCCTGGGGGTATGGGTATACTGGCTaGACTGGGATGCCTGTCATTGGAATCTCCTGGCCTTCAAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGPALGSWGYGYTG*TGMPVIGISWPSNG Trigger: CCCATTTGAAGGCCAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAGTATACCCATACCCCCAGGACCCCAAAGCTGGCCCTGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 90 bp | AGGAGGAGCTGCAGGGTTGTAGACTGGGGGCCCAGCTGGGTAGAGTaGATATTGGGGAGCAGGACCACTAGGTGGGTATATGAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSCRVVDWGPSWVE*ILGSRTTRWVYEAR Trigger: CCTGGCTTCATATACCCACCTAGTGGTCCTGCTCCCCAATATCCACTCTACCCAGCTGGGCCCCCAGTCTACAACCCTGCAGCTCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 90 bp | CATCTCCCAAGGTTGGCATCACTGAAGGGGCAGCAGAGACATGGCTaGTTCCTCAGGCTCCCGGGTAAGAGGGCTGTGGTGGCATATAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLPRLASLKGQQRHG*FLRLPGKRAVVAYR Trigger: CCTATATGCCACCACAGCCCTCTTACCCGGGAGCCTGAGGAACCAGCCATGTCTCTGCTGCCCCTTCAGTGATGCCAACCTTGGGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 90 bp | AGGGCCAGCTTTGGGGTCCTGGGGGTATGGGTATACTGGCTGCACTaGGATGCCTGTCATTGGAATCTCCTGGCCTTCAAATGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RASFGVLGVWVYWLH*DACHWNLLAFKWAL Trigger: CAGAGCCCATTTGAAGGCCAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAGTATACCCATACCCCCAGGACCCCAAAGCTGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS-3UTR CAA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCATCCGCCTTGGTCTGCTaGTGGATGGGGGTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RCRYRMRASPKVGITEGASALVC*WMGVRM Trigger: CATCCTCACCCCCATCCACAAGCAGACCAAGGCGGA...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CAA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGATGCCTGCTATGGTCTaGGGGCTGAAGGCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFRKPLGSQEQSALVCLWMPAMV*GLKARQ Trigger: CTGCCTGGCCTTCAGCCCCAAGACCATAGCAGGCAT...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CAA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGGGGCATCTCCCAAGGTaGGCATCACTGAAGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFRKPLGSQEQSALVCLWGHLPR*ASLKGQ Trigger: CTGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCC...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362011.7 |
||
| CDS-3UTR CAA 90 bp | GTCTTTAGGAAGCCTTTAGGAAGCCAGGAACAGTCCGCCTTGGTCTGCTTGTGGCTGGGATGCCTGTCATaGGAATCTCCTGGCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VFRKPLGSQEQSALVCLWLGCLS*ESPGLQ Trigger: TTGAAGGCCAGGAGATTCCAATGACAGGCATCCCAG...CCACAAGCAGACCAAGGCGGACTGTTCCTGGCTTCCTAAAGGCTTCCTAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CAA 90 bp | AGATGCAGGTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTGAAGGGGCAGAGCAGAGGGACTATTaGAAAACAGGCACTGTGACC | + |
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Preference number: 5 (lower is better) Translates to: RCRYRMRASPKVGITEGAEQRDY*KTGTVT Trigger: GGTCACAGTGCCTGTTTTCAAATAGTCCCTCTGCTC...TGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTACCTGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS-3UTR CAA 90 bp | CAGGGAATATCTGTAGTGCAAACGAGCATCTCTTCAGAGCTGTGGCAAAATTCAGCTGTTGTAGAGCTGTaGATCCCTAGCAGGGAATAT | + |
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Preference number: 5 (lower is better) Translates to: QGISVVQTSISSELWQNSAVVEL*IPSREY Trigger: ATATTCCCTGCTAGGGATCAACAGCTCTACAACAGC...TGAATTTTGCCACAGCTCTGAAGAGATGCTCGTTTGCACTACAGATATTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362011.7 |
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| CDS CAA 90 bp | CAGGTACCACAGGCAGTCCTCGCCGGCCAGCACTGCGGGCAGGGATaGGGGGTGCCCAGTGGCCACCAGGCCAGTTCATCCCCAGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: QVPQAVLAGQHCGQG*GVPSGHQASSSPAA Trigger: CGCGGCTGGGGATGAACTGGCCTGGTGGCCACTGGGCACCCCCAATCCCTGCCCGCAGTGCTGGCCGGCGAGGACTGCCTGTGGTACCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481699.1 |
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| CDS CCA 72 bp | AGGCAGTCCTCGCCGGCCAGCACTGCGGGCAGGGATTaGGGGTGCCCAGTGGCCACCAGGCCAGTTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: RQSSPASTAGRD*GCPVATRPVHP Trigger: GGGATGAACTGGCCTGGTGGCCACTGGGCACCCCCAATCCCTGCCCGCAGTGCTGGCCGGCGAGGACTGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481699.1 |
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| CDS CCA 72 bp | AGGAGGAGCTGCAGGGTTGTAGACTGGGGGCCCAGCTaGGTAGAGTGGATATTGGGGAGCAGGACCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: RRSCRVVDWGPS*VEWILGSRTTR Trigger: CCTAGTGGTCCTGCTCCCCAATATCCACTCTACCCAGCTGGGCCCCCAGTCTACAACCCTGCAGCTCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 72 bp | GCTGGTTCCTCAGGCTCCCGGGTAAGAGGGCTGTGGTaGCATATAGGGAGGAGGAGCTGCAGGGTTGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: AGSSGSRVRGLW*HIGRRSCRVVD Trigger: GTCTACAACCCTGCAGCTCCTCCTCCCTATATGCCACCACAGCCCTCTTACCCGGGAGCCTGAGGAACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 72 bp | AGGTTGGCATCACTGAAGGGGCAGCAGAGACATGGCTaGTTCCTCAGGCTCCCGGGTAAGAGGGCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RLASLKGQQRHG*FLRLPGKRAVV Trigger: CACCACAGCCCTCTTACCCGGGAGCCTGAGGAACCAGCCATGTCTCTGCTGCCCCTTCAGTGATGCCAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 72 bp | TGGCATATAGGGAGGAGGAGCTGCAGGGTTGTAGACTaGGGGCCCAGCTGGGTAGAGTGGATATTGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: WHIGRRSCRVVD*GPSWVEWILGS Trigger: GCTCCCCAATATCCACTCTACCCAGCTGGGCCCCCAGTCTACAACCCTGCAGCTCCTCCTCCCTATATGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CAA 90 bp | AGCTGCAGGGTTGTAGACTGGGGGCCCAGCTGGGTAGAGTGGATATaGGGGAGCAGGACCACTAGGTGGGTATATGAAGCCAGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SCRVVDWGPSWVEWI*GSRTTRWVYEARLW Trigger: CCACAGCCTGGCTTCATATACCCACCTAGTGGTCCTGCTCCCCAATATCCACTCTACCCAGCTGGGCCCCCAGTCTACAACCCTGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS TCA 72 bp | GGTGGTGGCAACCACAGCAACAAAGAGGATCACAGCTaGGGCGATGCCTGCTATGGTCTTGGGGCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GGGNHSNKEDHS*GDACYGLGAEG Trigger: GCCTTCAGCCCCAAGACCATAGCAGGCATCGCCTCAGCTGTGATCCTCTTTGTTGCTGTGGTTGCCACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS TCA 72 bp | GTACAGGATGAGGGCATCTCCCAAGGTTGGCATCACTaGAGGGGCAGCAGAGACATGGCTGGTTCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VQDEGISQGWHH*RGSRDMAGSSG Trigger: GCCTGAGGAACCAGCCATGTCTCTGCTGCCCCTTCAGTGATGCCAACCTTGGGAGATGCCCTCATCCTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS GCA 72 bp | CAGCAGAAGGTGAAGAACTCGCAGTTAAACCCCGGATaGCAGGAGCCATTCCGGTCCAGGTACCACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QQKVKNSQLNPG*QEPFRSRYHRQ Trigger: CTGCCTGTGGTACCTGGACCGGAATGGCTCCTGGCATCCGGGGTTTAACTGCGAGTTCTTCACCTTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000362011.7 ENST00000464117.1 ENST00000481699.1 |
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| CDS GCA 72 bp | ATGCCTGCTATGGTCTTGGGGCTGAAGGCCAGGCAGTaGTTCTGCTGCCTCTCGGTGATAAGCAAGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: MPAMVLGLKARQ*FCCLSVISKVR Trigger: CCTGACCTTGCTTATCACCGAGAGGCAGCAGAAGCACTGCCTGGCCTTCAGCCCCAAGACCATAGCAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000362011.7 ENST00000464117.1 ENST00000481699.1 |
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| CDS CCA 72 bp | AGGGCCAGCTTTGGGGTCCTGGGGGTATGGGTATACTaGCTGCACTGGGATGCCTGTCATTGGAATCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RASFGVLGVWVY*LHWDACHWNLL Trigger: CAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAGTATACCCATACCCCCAGGACCCCAAAGCTGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS GCA 72 bp | GGTCCTGGGGGTATGGGTATACTGGCTGCACTGGGATaGCTGTCATTGGAATCTCCTGGCCTTCAAATGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPGGMGILAALG*LSLESPGLQMG Trigger: GCCCATTTGAAGGCCAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAGTATACCCATACCCCCAGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 72 bp | TGCAGGGTTGTAGACTGGGGGCCCAGCTGGGTAGAGTaGATATTGGGGAGCAGGACCACTAGGTGGGTATAT | + |
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Preference number: 6 (lower is better) Translates to: CRVVDWGPSWVE*ILGSRTTRWVY Trigger: ATATACCCACCTAGTGGTCCTGCTCCCCAATATCCACTCTACCCAGCTGGGCCCCCAGTCTACAACCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 72 bp | GTATGGGTATACTGGCTGCACTGGGATGCCTGTCATTaGAATCTCCTGGCCTTCAAATGGGCTCTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VWVYWLHWDACH*NLLAFKWALEL Trigger: CAGCTCCAGAGCCCATTTGAAGGCCAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAGTATACCCATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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| CDS CCA 72 bp | TTTGGGGTCCTGGGGGTATGGGTATACTGGCTGCACTaGGATGCCTGTCATTGGAATCTCCTGGCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FGVLGVWVYWLH*DACHWNLLAFK Trigger: TTTGAAGGCCAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAGTATACCCATACCCCCAGGACCCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362011.7 ENST00000464117.1 |
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