RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHE (Homo sapiens)

Ensembl gene IDs: ENSG00000169291

Ensembl transcript IDs: ENST00000304760.3, ENST00000486773.1, ENST00000555188.5

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACAGGGACCAGATGTCACCCAGGTGGCCAGGCTGCGTGGGCCATaGAGGGGGCACGGGAGTGGGCACTGGAGCCAGGACGTGGAGGGA +
Preference number: 1 (lower is better)
Translates to: TQGPDVTQVARLRGP*RGHGSGHWSQDVEG
Trigger: TCCCTCCACGTCCTGGCTCCAGTGCCCACTCCCGTGCCCCCTCCATGGCCCACGCAGCCTGGCCACCTGGGTGACATCTGGTCCCTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CCA 90 bp GAGAACTGCAGGGAAGCCTGGAAATTATGTAACTCCACTCAAAGCTaGACTGAGAGGCGCCGCCTCTGGGCCCCCACCTGGGCAGTCAGA +
Preference number: 1 (lower is better)
Translates to: ENCREAWKLCNSTQS*TERRRLWAPTWAVR
Trigger: TCTGACTGCCCAGGTGGGGGCCCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTTACATAATTTCCAGGCTTCCCTGCAGTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR TCA 90 bp GCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAGCCTaGTTGTTTCAGCTGCAGGGGCTCAGCTTCCTCAGGAAGGAAATG +
Preference number: 1 (lower is better)
Translates to: AILLNSPARLCSPPA*LFQLQGLSFLRKEM
Trigger: CATTTCCTTCCTGAGGAAGCTGAGCCCCTGCAGCTGAAACAATCAGGCTGGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 90 bp AACGCACCATCTCTCTTCACACAGGGTCAGCGGTGGAGGGTAAGTTaGACAGAAGGCCCACTGCACAGCAGGCCAAGTTTCTCTAGTCCA +
Preference number: 1 (lower is better)
Translates to: NAPSLFTQGQRWRVS*TEGPLHSRPSFSSP
Trigger: TGGACTAGAGAAACTTGGCCTGCTGTGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCGCTGACCCTGTGTGAAGAGAGATGGTGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR GCA 90 bp CTGGTATTGTATATCTGGTGGCCTATCCCATTTTCTGAGCCATATTaGTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAGCCTGATTGT +
Preference number: 1 (lower is better)
Translates to: LVLYIWWPIPFSEPY*STPPPDSVLLQPDC
Trigger: ACAATCAGGCTGGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 90 bp CTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCTaGATTAGGACTTCTGAGGGAGAAAGACCACCTTCTTGCCCGTCA +
Preference number: 1 (lower is better)
Translates to: LRPHSEVADFHELQS*IRTSEGERPPSCPS
Trigger: TGACGGGCAAGAAGGTGGTCTTTCTCCCTCAGAAGTCCTAATTCAGCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CCA 90 bp AATTTCAGGAACACAGTCGAGCTATTCCTGGTATTGTATATCTGGTaGCCTATCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCC +
Preference number: 1 (lower is better)
Translates to: NFRNTVELFLVLYIW*PIPFSEPYCSTPPP
Trigger: GGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAGGAATAGCTCGACTGTGTTCCTGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 90 bp TTATTGGACCTGGGAGGGGGTGTAACACTATCACAAAGGCCACCCTaGACTCTTGATCATCAGATAGACCAAATCCATCCCCTACTGAAA +
Preference number: 1 (lower is better)
Translates to: LLDLGGGVTLSQRPP*TLDHQIDQIHPLLK
Trigger: TTTCAGTAGGGGATGGATTTGGTCTATCTGATGATCAAGAGTTCAGGGTGGCCTTTGTGATAGTGTTACACCCCCTCCCAGGTCCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR TCA 90 bp AATGCTGTTAGGGCTCTTGACAATGATCCTCCAATACAGGGACACTaGACTCACGGAGCAGTGAGAATTTCCATGATACACACTCCACCA +
Preference number: 1 (lower is better)
Translates to: NAVRALDNDPPIQGH*THGAVRISMIHTPP
Trigger: TGGTGGAGTGTGTATCATGGAAATTCTCACTGCTCCGTGAGTTCAGTGTCCCTGTATTGGAGGATCATTGTCAAGAGCCCTAACAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR GCA 90 bp GAGTTACATAATCCAATTAACAAATTAGGACAATTTCCCACCACCTaGCTCAAAAACTCCTGGCTGCCCCTATCAGCTACCTGCCCACCT +
Preference number: 1 (lower is better)
Translates to: ELHNPINKLGQFPTT*LKNSWLPLSATCPP
Trigger: AGGTGGGCAGGTAGCTGATAGGGGCAGCCAGGAGTTTTTGAGGCAGGTGGTGGGAAATTGTCCTAATTTGTTAATTGGATTATGTAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR TCA 90 bp GCTTGCTGTGCACTGGGTAGAGTAAAGTCATGTGTTCTGCCCCTTTaGAAGGCAACTTTTCATTGGAATAATAGTGTACCACTTCAGGGA +
Preference number: 1 (lower is better)
Translates to: ACCALGRVKSCVLPL*KATFHWNNSVPLQG
Trigger: TCCCTGAAGTGGTACACTATTATTCCAATGAAAAGTTGCCTTTCAAAGGGGCAGAACACATGACTTTACTCTACCCAGTGCACAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR CCA 90 bp TTTAATCCACAAGCACCAATTTCAGGAACACAGTCGAGCTATTCCTaGTATTGTATATCTGGTGGCCTATCCCATTTTCTGAGCCATATT +
Preference number: 1 (lower is better)
Translates to: FNPQAPISGTQSSYS*YCISGGLSHFLSHI
Trigger: AATATGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAGGAATAGCTCGACTGTGTTCCTGAAATTGGTGCTTGTGGATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp GCCTGGAAATTATGTAACTCCACTCAAAGCTGGACTGAGAGGCGCCGCCTCTGGGGTGGCCAGGCTGCGTaGGCCATGGAGGGGGCACGG +
Preference number: 2 (lower is better)
Translates to: AWKLCNSTQSWTERRRLWGGQAA*AMEGAR
Trigger: CCGTGCCCCCTCCATGGCCCACGCAGCCTGGCCACC...CCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTTACATAATTTCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR-3UTR GCA 90 bp CCCCCACCTGGGCAGTCAGAGGAAAGCCACAGGACAGGTGATGGTGGCCGCCATGGACGTGGAGGGAGCTaGCTCCCTTTCTTCATGGCA +
Preference number: 2 (lower is better)
Translates to: PPPGQSEESHRTGDGGRHGRGGS*LPFFMA
Trigger: TGCCATGAAGAAAGGGAGGCAGCTCCCTCCACGTCC...ATGGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACTGCCCAGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR-3UTR TCA 90 bp GGCCCCCACCTGGGCAGTCAGAGGAAAGCCACAGGACAGGTGATGGTGGCCGCCTTGTCTTGCAGAAAGTaGCACAGGGACCAGATGTCA +
Preference number: 2 (lower is better)
Translates to: GPHLGSQRKATGQVMVAALSCRK*HRDQMS
Trigger: TGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAA...GGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACTGCCCAGGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR-3UTR CCA 90 bp TCTCCTTCAGGACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTTGCAGAAGAGGGGGCACGGGAGTaGGCACTGGAGCCAGGACGT +
Preference number: 2 (lower is better)
Translates to: SPSGHHALLFEAGPCLAEEGARE*ALEPGR
Trigger: ACGTCCTGGCTCCAGTGCCCACTCCCGTGCCCCCTC...TTCTGCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CAA 90 bp CTCCTTCAGGACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTaGCAGAAAGTGACACAGGGACCAGATGTCACCCAGGTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LLQDTMLSSLRLVLV*QKVTQGPDVTQVAR
Trigger: CCTGGCCACCTGGGTGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CAA 90 bp GGTGATGGTGGCCGCCATCTCCTTCAGGACACCATGCTCTCCTCTTaGAGGCTGGTCCTTGTCTTGCAGAAAGTGACACAGGGACCAGAT +
Preference number: 2 (lower is better)
Translates to: GDGGRHLLQDTMLSS*RLVLVLQKVTQGPD
Trigger: ATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAGATGGCGGCCACCATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CAA 90 bp CTGCAGGGGCTCAGCTTCCTCAGGAAGGAAATGCTGTTAGGGCTCTaGACAATGATCCTCCAATACAGGGACACTGAACTCACGGAGCAG +
Preference number: 2 (lower is better)
Translates to: LQGLSFLRKEMLLGL*TMILQYRDTELTEQ
Trigger: CTGCTCCGTGAGTTCAGTGTCCCTGTATTGGAGGATCATTGTCAAGAGCCCTAACAGCATTTCCTTCCTGAGGAAGCTGAGCCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATCAGTGCAATCCTGCTaGGTGTCAAGGGGTGCGGGG +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGESVQSC*VSRGAG
Trigger: CCCCGCACCCCTTGACACTCAGCAGGATTGCACTGA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AGGCTGGTCCTTGTCTTGCAGAAAGTGACACAGGGACCAGATGTCACCCAGGTGGCATTGCTGTTAGGATaGCATGGTTACGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: RLVLVLQKVTQGPDVTQVALLLG*HGYGAL
Trigger: AAGAGCACCGTAACCATGTCATCCTAACAGCAATGC...CACCTGGGTGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAGGAGGAGACATGAATaGGTGGGCAGAGGATCCCTC +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGERRRHE*VGRGSL
Trigger: GAGGGATCCTCTGCCCACTCATTCATGTCTCCTCCT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTCAGTGCAATCCTGCTaGGTGTCAAGGGGTGCGGGG +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSVQSC*VSRGAG
Trigger: CCCCGCACCCCTTGACACTCAGCAGGATTGCACTGA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAGCTGGGAGTGGTGGTaGGAACCTATAGTCCCACCT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTSWEWW*EPIVPP
Trigger: AGGTGGGACTATAGGTTCGCACCACCACTCCCAGCT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGAACAGAAGGCCCACTaGACAGCAGGCCAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEEQKAH*TAGQVS
Trigger: AGAAACTTGGCCTGCTGTGCAGTGGGCCTTCTGTTC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAGCCTCCCGAATAGCTaGAACCACAGGCATCCACCA +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTSLPNS*NHRHPP
Trigger: TGGTGGATGCCTGTGGTTCCAGCTATTCGGGAGGCT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATACACACAAGGCCAGTaGTTTGCAGGCCATCCTGAG +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEYTQGQ*FAGHPE
Trigger: CTCAGGATGGCCTGCAAACCACTGGCCTTGTGTGTA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATACACACAAGGCCAGTaGTTTGCAGGCCATCCTGAG +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEYTQGQ*FAGHPE
Trigger: CTCAGGATGGCCTGCAAACCACTGGCCTTGTGTGTA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAGCACTCCCTAAACCCTaGAAGGAGGGAGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEALPKP*KEGETR
Trigger: CCTTGTTTCTCCCTCCTTCCAGGGTTTAGGGAGTGC...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CAA 90 bp AGGGACACCCTGCTGGGCCTAATTGTTTTTAGAACATATGGAACTTaGTGCCACCACACAGCTGTGAACTCCCTGGCTTTTGTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: RDTLLGLIVFRTYGT*CHHTAVNSLAFVSL
Trigger: CAAGCTGACAAAAGCCAGGGAGTTCACAGCTGTGTGGTGGCACAAAGTTCCATATGTTCTAAAAACAATTAGGCCCAGCAGGGTGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATGGGGAAGAACTGCTTaGACCCAGGAGTCAGATGTT +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEWGRTA*TQESDV
Trigger: AACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATTGAGGTCAGGAGTTTaGGACCAGCCTGACGAAGAC +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTLRSGV*DQPDED
Trigger: GTCTTCGTCAGGCTGGTCTCAAACTCCTGACCTCAA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAATGCTCCTGAACTCCTaGCTTAACCTTCCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEMLLNS*LNLPEG
Trigger: ACCCTCAGGAAGGTTAAGTCAGGAGTTCAGGAGCAT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTGCGGGGAAGGGAAATaGAATCGACATCACTGCACT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKCGEGK*NRHHCT
Trigger: AGTGCAGTGATGTCGATTTCATTTCCCTTCCCCGCA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAGTGGGCGGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: KIILRPHSEVADFHELQSSGRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCCGCCCACT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATCAAGGAGGAGACATaGATGAGTGGGCAGAGGATC +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEIKEET*MSGQRI
Trigger: GATCCTCTGCCCACTCATTCATGTCTCCTCCTTGAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGCCTTGTCCTCTGAGATaGTGGTTGTGCGCTGATGAT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKPCPLR*WLCADD
Trigger: ATCATCAGCGCACAACCAGCATCTCAGAGGACAAGG...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACCTTGTCCTCTGAGATaGTGGTTGTGCGCTGATGAT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEPCPLR*WLCADD
Trigger: ATCATCAGCGCACAACCAGCATCTCAGAGGACAAGG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCCAGGAGTCAGATGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRPGVRC*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACATCTGACTCCTGG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAGCTGGGAGTGGTGGTaGGAACCTATAGTCCCACCT +
Preference number: 2 (lower is better)
Translates to: KIILRPHSEVADFHELQSSWEWW*EPIVPP
Trigger: AGGTGGGACTATAGGTTCGCACCACCACTCCCAGCT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAGGTGCCCGCCACCGTaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGERCPPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCACGGTGGCGGGCACCT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTCACTCAGGCTGGAGTaGAATGGTGCGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRSLRLE*NGAIMA
Trigger: AGCCATGATCGCACCATTGCACTCCAGCCTGAGTGA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATGTCCTCTGAGATGCTaGTTGTGCGCTGATGATGCC +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTCPLRC*LCADDA
Trigger: GGCATCATCAGCGCACAACCAGCATCTCAGAGGACA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATCGGGGAGACTGAGGTaGGTGGATCATTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTSGRLR*VDHLRS
Trigger: TGACCTCAAATGATCCACCCACCTCAGTCTCCCCGA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTTAAGACCAAAGACTTaGCCGGGTGCAGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKLRPKT*PGAVAH
Trigger: ATGAGCCACTGCACCCGGCCAAGTCTTTGGTCTTAA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACAGATCAGCTGGCCATaGAGGTTTAACAAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEQISWP*RFNKEA
Trigger: GGCTTCCTTGTTAAACCTCCATGGCCAGCTGATCTG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGCACTCCCTAAACCCTaGAAGGAGGGAGAAACAAGG +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTALPKP*KEGETR
Trigger: CCTTGTTTCTCCCTCCTTCCAGGGTTTAGGGAGTGC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCTGTCAAAATTGCAGTTaGCATTTTGACAATCAGGGG +
Preference number: 2 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSCQNCS*HFDNQG
Trigger: CCCCTGATTGTCAAAATGCCAACTGCAATTTTGACA...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCATATGGGGCAGTTTTaGGACCCAAATGACCAACCC +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRHMGQF*DPNDQP
Trigger: GGGTTGGTCATTTGGGTCTCAAAACTGCCCCATATG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCTGGTCTCAAACTCCTaGCCTCACGTGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMLVSNS*PHVICL
Trigger: CAGGCAGATCACGTGAGGTCAGGAGTTTGAGACCAG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAACGAGGCTACTAAGGTaGGGTAGAAACTCATCCTCG +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTTRLLR*GRNSSS
Trigger: CGAGGATGAGTTTCTACCTCACCTTAGTAGCCTCGT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCTGAGATGCTGGTTGTaGGCTGATGATGCCCTTGAA +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRLRCWL*ADDALE
Trigger: TTCAAGGGCATCATCAGCGCACAACCAGCATCTCAG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGCATCCTCTTCCAGTCTaGACCATCATGTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKHPLPV*TIMWKS
Trigger: GCTTTTCCACATGATGGTGCAGACTGGAAGAGGATG...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAGGTGCCCGCCACCGTaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTRCPPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCACGGTGGCGGGCACCT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTCACCCAGGATGGAGTaGAGTGACATAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKSPRME*SDIILA
Trigger: AGCCAAGATTATGTCACTGCACTCCATCCTGGGTGA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCTGTCCTCTGAGATGCTaGTTGTGCGCTGATGATGCC +
Preference number: 2 (lower is better)
Translates to: KIILRPHSEVADFHELQSCPLRC*LCADDA
Trigger: GGCATCATCAGCGCACAACCAGCATCTCAGAGGACA...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAGCCTCCCGAATAGCTaGAACCACAGGCATCCACCA +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERSLPNS*NHRHPP
Trigger: TGGTGGATGCCTGTGGTTCCAGCTATTCGGGAGGCT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGCAATGGTGCGATCATaGCTCGCTGCAGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNAMVRS*LAAALT
Trigger: GGTCAAGGCTGCAGCGAGCCATGATCGCACCATTGC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGAGCTTCAGATCAGCTaGCCATGGAGGTTTAACAAG +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEELQIS*PWRFNK
Trigger: CTTGTTAAACCTCCATGGCCAGCTGATCTGAAGCTC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CAA 90 bp GGATCCCTCCCCACTGAAAACAATTGCAGCCAGATTCACACTAGGTaGATAGGTTCTCATCCATCCCGTAATGGTTCTACACACACAGAA +
Preference number: 2 (lower is better)
Translates to: GSLPTENNCSQIHTR*IGSHPSRNGSTHTE
Trigger: TTCTGTGTGTGTAGAACCATTACGGGATGGATGAGAACCTATCAACCTAGTGTGAATCTGGCTGCAATTGTTTTCAGTGGGGAGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCTGGGGAAGAACTGCTTaGACCCAGGAGTCAGATGTT +
Preference number: 2 (lower is better)
Translates to: KIILRPHSEVADFHELQSWGRTA*TQESDV
Trigger: AACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCA...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTTGAGGTCAGGAGTTTaGGACCAGCCTGACGAAGAC +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMLRSGV*DQPDED
Trigger: GTCTTCGTCAGGCTGGTCTCAAACTCCTGACCTCAA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACATGAACTCCAGAGCTaGATTAGGACTTCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTHELQS*IRTSEG
Trigger: TCCCTCAGAAGTCCTAATTCAGCTCTGGAGTTCATG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGTTTTGAGACCCAAATaGCCAACCCCAGAATACAGA +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEVLRPK*PTPEYR
Trigger: TCTGTATTCTGGGGTTGGTCATTTGGGTCTCAAAAC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAACTGAAACTAACCAACTaGACTTGTCCAGTCATCGCA +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLELKLTN*TCPVIA
Trigger: TGCGATGACTGGACAAGTTCAGTTGGTTAGTTTCAG...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAACACTTAACCCGCAACTaGAGAATGCCTCACAGTTAT +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEHLTRN*RMPHSY
Trigger: ATAACTGTGAGGCATTCTTCAGTTGCGGGTTAAGTG...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGAACGGCTAAGAACTTaGCAAAATGAGACGCCTGTT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEERLRT*QNETPV
Trigger: AACAGGCGTCTCATTTTGTCAAGTTCTTAGCCGTTC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGAACGGCTAAGAACTTaGCAAAATGAGACGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKERLRT*QNETPV
Trigger: AACAGGCGTCTCATTTTGTCAAGTTCTTAGCCGTTC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGCCTATCCCATTTTCTaGGCCATATTGCTCAACTCC +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRAYPIF*AILLNS
Trigger: GGAGTTGAGCAATATGGCTCAGAAAATGGGATAGGC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATGTGTTCTGCCCCTTTaGAAGGCAACTTTTCATTGG +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLECVLPL*KATFHW
Trigger: CCAATGAAAAGTTGCCTTTCAAAGGGGCAGAACACA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACATCCTCTTCCAGTCTaGACCATCATGTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTHPLPV*TIMWKS
Trigger: GCTTTTCCACATGATGGTGCAGACTGGAAGAGGATG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTCACCCAGGATGGAGTaGAGTGACATAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRSPRME*SDIILA
Trigger: AGCCAAGATTATGTCACTGCACTCCATCCTGGGTGA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAACAGAAGGCCCACTaGACAGCAGGCCAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMEQKAH*TAGQVS
Trigger: AGAAACTTGGCCTGCTGTGCAGTGGGCCTTCTGTTC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAAAATTAGCTGGGAGTaGTGGTGCGAACCTATAGTC +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEKISWE*WCEPIV
Trigger: GACTATAGGTTCGCACCACCACTCCCAGCTAATTTT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAGCCTCCCAAATTGTTaGGATTACGTGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRSLPNC*DYVHEP
Trigger: TGGCTCATGCACGTAATCCCAACAATTTGGGAGGCT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGCAATGGTGCGATCATaGCTCGCTGCAGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRAMVRS*LAAALT
Trigger: GGTCAAGGCTGCAGCGAGCCATGATCGCACCATTGC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGAGCTTCAGATCAGCTaGCCATGGAGGTTTAACAAG +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTELQIS*PWRFNK
Trigger: CTTGTTAAACCTCCATGGCCAGCTGATCTGAAGCTC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTCCTCCCCTCGCATCTaGAAAGACCATTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSSPRI*KDHSWL
Trigger: CAACCAGGAATGGTCTTTCCAGATGCGAGGGGAGGA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGACCTTCCCCTTGGAGATaGGGAAAGCCATGGGGCTTA +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRPSPWR*GKPWGL
Trigger: TAAGCCCCATGGCTTTCCTCATCTCCAAGGGGAAGG...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGGATCCCTCCCCACTaGAAACAATTGCAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRIPPH*KQLQPD
Trigger: ATCTGGCTGCAATTGTTTTCAGTGGGGAGGGATCCT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATGGTCTGAGCCACTATaGTGTGGACACATCCTTGAC +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERWSEPL*CGHILD
Trigger: GTCAAGGATGTGTCCACATCATAGTGGCTCAGACCA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGAACACAGCGCTTGTCTaGTTCAGTGTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKNTALV*FSVYLL
Trigger: CAACAAATACACACTGAATCAGACAAGCGCTGTGTT...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAGGGCTTGCAGTGGCTaGATCTTAGTGAAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERRACSG*ILVKLA
Trigger: AGCAAGCTTCACTAAGATTCAGCCACTGCAAGCCCT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACTGAGATGCTGGTTGTaGGCTGATGATGCCCTTGAA +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERLRCWL*ADDALE
Trigger: TTCAAGGGCATCATCAGCGCACAACCAGCATCTCAG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAGAAAGACCACCTTCTTaGCCGTCATTCACATTTTCT +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEERPPS*PSFTFS
Trigger: AGAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTC...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGACATATGGAACTTTGTaGCACCACACAGCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRTYGTL*HHTAVN
Trigger: GTTCACAGCTGTGTGGTGGCACAAAGTTCCATATGT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTTTTCTGAGCCATATTaGTCAACTCCCCCGCCCGAC +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNFSEPY*STPPPD
Trigger: GTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAAATTGCAAAACCAGTaGTTACGCCCAAGCACGAGG +
Preference number: 2 (lower is better)
Translates to: KIILRPHSEVADFHELQSKLQNQ*LRPSTR
Trigger: CCTCGTGCTTGGGCGTAAGCACTGGTTTTGCAATTT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAAAATTAGCTGGGAGTaGTGGTGCGAACCTATAGTC +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTKISWE*WCEPIV
Trigger: GACTATAGGTTCGCACCACCACTCCCAGCTAATTTT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAACCCTACCCCAGAGCTaGAGGCAACAGCTAAATCAT +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERTLPQS*RQQLNH
Trigger: ATGATTTAGCTGTTGCCTCCAGCTCTGGGGTAGGGT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGACCCTACCCCAGAGCTaGAGGCAACAGCTAAATCAT +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMTLPQS*RQQLNH
Trigger: ATGATTTAGCTGTTGCCTCCAGCTCTGGGGTAGGGT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGTCTGCACCATCATGTaGAAAAGCCACGTGGATTTT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTVCTIM*KSHVDF
Trigger: AAAATCCACGTGGCTTTTCCACATGATGGTGCAGAC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACAGATCAGCTGGCCATaGAGGTTTAACAAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERQISWP*RFNKEA
Trigger: GGCTTCCTTGTTAAACCTCCATGGCCAGCTGATCTG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGGGCATTTTTCAAGATaGCAACTGCTGTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKGHFSR*QLLCHH
Trigger: ATGATGACACAGCAGTTGCCATCTTGAAAAATGCCC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CAA 90 bp TCCACAAGCACCAATTTCAGGAACACAGTCGAGCTATTCCTGGTATaGTATATCTGGTGGCCTATCCCATTTTCTGAGCCATATTGCTCA +
Preference number: 2 (lower is better)
Translates to: STSTNFRNTVELFLV*YIWWPIPFSEPYCS
Trigger: TGAGCAATATGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAGGAATAGCTCGACTGTGTTCCTGAAATTGGTGCTTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTGTCTCAAGACAAAATaGCAAAAAGCCAGAGCATTC +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKCLKTK*QKARAF
Trigger: GAATGCTCTGGCTTTTTGTCATTTTGTCTTGAGACA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACCTGGTTGTATAAAATaGAAGCTGGCACCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTPGCIK*KLAPKA
Trigger: AGCTTTTGGTGCCAGCTTTCATTTTATACAACCAGG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGACAGTCAGTACATTTaGATATGGGGCAGTTTTGAG +
Preference number: 2 (lower is better)
Translates to: SPENILGDGITRRNEDYRDSQYI*IWGSFE
Trigger: CTCAAAACTGCCCCATATGCAAATGTACTGACTGTC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAACACAAATACCAATTCTaGAAAGTACGGAGACTTCCA +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEHKYQF*KVRRLP
Trigger: TGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTG...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGTACCACTTCAGGGATaGTGTCAAACACAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNVPLQG*CQTQRL
Trigger: CAAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTAC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATATAGTCCCACCTACTTaGGAGGCTGATGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNIVPPT*EADGEE
Trigger: TTCTTCCCCATCAGCCTCCCAAGTAGGTGGGACTAT...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATCGGGGAGACTGAGGTaGGTGGATCATTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRSGRLR*VDHLRS
Trigger: TGACCTCAAATGATCCACCCACCTCAGTCTCCCCGA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTTAAGACCAAAGACTTaGCCGGGTGCAGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNLRPKT*PGAVAH
Trigger: ATGAGCCACTGCACCCGGCCAAGTCTTTGGTCTTAA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGCCTCCCAAATTGTTaGGATTACGTGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSLPNC*DYVHEP
Trigger: TGGCTCATGCACGTAATCCCAACAATTTGGGAGGCT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAACTGACACAGCTCTATaGATGCTAAATTCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLETDTAL*MLNSRQ
Trigger: TTGCCTTGAATTTAGCATCCATAGAGCTGTGTCAGT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATTCACCAGAAGAAACTaGTGTCAAAATTGCAGTTGG +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEFTRRN*CQNCSW
Trigger: CCAACTGCAATTTTGACACCAGTTTCTTCTGGTGAA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR CAA 90 bp TGGAATAATAGTGTACCACTTCAGGGATGCTGTCAAACACAGCGCTaGTCTGATTCAGTGTGTATTTGTTGTCTTTGGTCTGAGCCACTA +
Preference number: 2 (lower is better)
Translates to: WNNSVPLQGCCQTQR*SDSVCICCLWSEPL
Trigger: TAGTGGCTCAGACCAAAGACAACAAATACACACTGAATCAGACAAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTACACTATTATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGAAAATCCACAGAGATTaGGAGAACACACACTTTCTT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKKIHRD*ENTHFL
Trigger: AAGAAAGTGTGTGTTCTCTCAATCTCTGTGGATTTT...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGACATATGGGGCAGTTTTaGGACCCAAATGACCAACCC +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRHMGQF*DPNDQP
Trigger: GGGTTGGTCATTTGGGTCTCAAAACTGCCCCATATG...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAATAACTCGAAGGAATaGGGACTACAGGAAAATACT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGENNSKE*GLQENT
Trigger: AGTATTTTCCTGTAGTCCTCATTCCTTCGAGTTATT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATACATTCATCACAGTTaGTGGGTATGGGCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTYIHHS*WVWAKN
Trigger: ATTTTTGGCCCATACCCAGCAACTGTGATGAATGTA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGACATATGGAACTTTGTaGCACCACACAGCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMTYGTL*HHTAVN
Trigger: GTTCACAGCTGTGTGGTGGCACAAAGTTCCATATGT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTGTGAAGGGTTTCAGTaGAATCCTGCTGAGTGTCAA +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMCEGFQ*NPAECQ
Trigger: TTGACACTCAGCAGGATTGCACTGAAACCCTTCACA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGCCTATATTGGCTACTaGAAAACAACCAGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGEAYIGY*KTTRSF
Trigger: AAAACTTCTGGTTGTTTTGCAGTAGCCAATATAGGC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGCCTATATTGGCTACTaGAAAACAACCAGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: LVNERSVKGFSAILLSVKAYIGY*KTTRSF
Trigger: AAAACTTCTGGTTGTTTTGCAGTAGCCAATATAGGC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAACCCAATACCAATTTTaGATTCTCATCCAAGTGTCT +
Preference number: 2 (lower is better)
Translates to: KGNEIDITALPKPWKEGETQYQF*ILIQVS
Trigger: AGACACTTGGATGAGAATGCAAAATTGGTATTGGGT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACCCACTGAAAACAATTaGAGCCAGATTCACACTAGG +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERPTENN*SQIHTR
Trigger: CCTAGTGTGAATCTGGCTGCAATTGTTTTCAGTGGG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAATAGTCCCACCTACTTaGGAGGCTGATGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRIVPPT*EADGEE
Trigger: TTCTTCCCCATCAGCCTCCCAAGTAGGTGGGACTAT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAATTAGCTGGGAGTGGTaGTGCGAACCTATAGTCCCA +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRISWEW*CEPIVP
Trigger: TGGGACTATAGGTTCGCACCACCACTCCCAGCTAAT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAAAATCCACAGAGATTaGGAGAACACACACTTTCTT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTKIHRD*ENTHFL
Trigger: AAGAAAGTGTGTGTTCTCTCAATCTCTGTGGATTTT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATTATTTCTCTACTaGGAGGGCCTACTCCAGATT +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMELFLY*EGLLQI
Trigger: AATCTGGAGTAGGCCCTCTCAGTAGAGAAATAATTC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAACGCATGTAATCCTTaGGTGGTTTATCCTTATCAC +
Preference number: 2 (lower is better)
Translates to: KIILRPHSEVADFHELQSNACNP*VVYPYH
Trigger: GTGATAAGGATAAACCACTCAAGGATTACATGCGTT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGAAAGACCACCTTCTTaGCCGTCATTCACATTTTCT +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERERPPS*PSFTFS
Trigger: AGAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGATGCCTCTTATTTTCTaGAATGCACACCCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMMPLIF*NAHPCE
Trigger: TTCACAGGGGTGTGCATTGCAGAAAATAAGAGGCAT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAATCTTAGTGAAGCTTaGTGTGCACTGGGTAGAGTA +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMNLSEA*CALGRV
Trigger: TACTCTACCCAGTGCACAGCAAGCTTCACTAAGATT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCAGTACATTTGCATATaGGGCAGTTTTGAGACCCAA +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMQYICI*GSFETQ
Trigger: TTGGGTCTCAAAACTGCCCCATATGCAAATGTACTG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGATCACACAACCTTTTaGCTGAGATCTTATCTGAAT +
Preference number: 2 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTDHTTF*LRSYLN
Trigger: ATTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTGTCTCAAGACAAAATaGCAAAAAGCCAGAGCATTC +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMCLKTK*QKARAF
Trigger: GAATGCTCTGGCTTTTTGTCATTTTGTCTTGAGACA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTCAATGCACACCCCTGTaGAACACCTTCACAGTATGT +
Preference number: 2 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCQCTPL*NTFTVC
Trigger: ACATACTGTGAAGGTGTTTCACAGGGGTGTGCATTG...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCAATCAGGGGGATCTTaGTTTATTAAAGTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMQSGGS*FIKVPN
Trigger: ATTGGGGACTTTAATAAATCAAGATCCCCCTGATTG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAATTCATCACAGTTGCTaGGTATGGGCCAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERIHHSC*VWAKNH
Trigger: ATGATTTTTGGCCCATACCCAGCAACTGTGATGAAT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGTATTGTATATCTGGTaGCCTATCCCATTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMVLYIW*PIPFSE
Trigger: CTCAGAAAATGGGATAGGCCACCAGATATACAATAC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCTGGTATTGTATATCTaGTGGCCTATCCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: QGKFTERHSSHQRISWEMLVLYI*WPIPFS
Trigger: AGAAAATGGGATAGGCCACCAGATATACAATACCAG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATATTCATCACAGTTGCTaGGTATGGGCCAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNIHHSC*VWAKNH
Trigger: ATGATTTTTGGCCCATACCCAGCAACTGTGATGAAT...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR TCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATATCATTGTGTTCCAGTaGGGAAAAGTTCCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: KTFFSPENILGDGITRRNIIVFQ*GKVPLK
Trigger: TTTAAGAGGAACTTTTCCTCACTGGAACACAATGAT...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGATCACACAACCTTTTaGCTGAGATCTTATCTGAAT +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRDHTTF*LRSYLN
Trigger: ATTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAACTGGTGTCAAAATTaGAGTTGGCATTTTGACAAT +
Preference number: 2 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRNWCQN*SWHFDN
Trigger: ATTGTCAAAATGCCAACTGCAATTTTGACACCAGTT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR CCA 72 bp AACTCCACTCAAAGCTGGACTGAGAGGCGCCGCCTCTaGGCCCCCACCTGGGCAGTCAGAGGAAAGCCACAG +
Preference number: 3 (lower is better)
Translates to: NSTQSWTERRRL*APTWAVRGKPQ
Trigger: CTGTGGCTTTCCTCTGACTGCCCAGGTGGGGGCCCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR TCA 72 bp CCCACCTGGGCAGTCAGAGGAAAGCCACAGGACAGGTaGTGGTGGCCGCCATCTCCTTCAGGACACCATGCT +
Preference number: 3 (lower is better)
Translates to: PTWAVRGKPQDR*WWPPSPSGHHA
Trigger: AGCATGGTGTCCTGAAGGAGATGGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACTGCCCAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CCA 72 bp AGGGAAGCCTGGAAATTATGTAACTCCACTCAAAGCTaGACTGAGAGGCGCCGCCTCTGGGCCCCCACCTGG +
Preference number: 3 (lower is better)
Translates to: REAWKLCNSTQS*TERRRLWAPTW
Trigger: CCAGGTGGGGGCCCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTTACATAATTTCCAGGCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR TCA 72 bp TCTCTCTTCACACAGGGTCAGCGGTGGAGGGTAAGTTaGACAGAAGGCCCACTGCACAGCAGGCCAAGTTTC +
Preference number: 3 (lower is better)
Translates to: SLFTQGQRWRVS*TEGPLHSRPSF
Trigger: GAAACTTGGCCTGCTGTGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCGCTGACCCTGTGTGAAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR GCA 72 bp CCCGACTCTGTTCTCCTCCAGCCTGATTGTTTCAGCTaGAGGGGCTCAGCTTCCTCAGGAAGGAAATGCTGT +
Preference number: 3 (lower is better)
Translates to: PDSVLLQPDCFS*RGSASSGRKCC
Trigger: ACAGCATTTCCTTCCTGAGGAAGCTGAGCCCCTGCAGCTGAAACAATCAGGCTGGAGGAGAACAGAGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR GCA 72 bp ACAACTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTaGAATCCTGCTGAGTGTCAAGGGGTGCGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: TTSEREICEGFQ*NPAECQGVRGR
Trigger: CCTTCCCCGCACCCCTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR GCA 72 bp TATATCTGGTGGCCTATCCCATTTTCTGAGCCATATTaGTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: YIWWPIPFSEPY*STPPPDSVLLQ
Trigger: CTGGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGATAGGCCACCAGATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCATGCTGTTAGGGCTCTaGACAATGATCCTCCAATAC +
Preference number: 3 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSMLLGL*TMILQY
Trigger: GTATTGGAGGATCATTGTCAAGAGCCCTAACAGCAT...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 72 bp CCTGGTATTGTATATCTGGTGGCCTATCCCATTTTCTaGGCCATATTGCTCAACTCCCCCGCCCGACTCTGT +
Preference number: 3 (lower is better)
Translates to: PGIVYLVAYPIF*AILLNSPARLC
Trigger: ACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACCTCTGAGATGCTGGTaGTGCGCTGATGATGCCCTT +
Preference number: 3 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTPLRCW*CADDAL
Trigger: AAGGGCATCATCAGCGCACAACCAGCATCTCAGAGG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGTTGCTAGTCCAGCCTaGTCCTCTGAGATGCTGGTT +
Preference number: 3 (lower is better)
Translates to: KGNEIDITALPKPWKEGEVASPA*SSEMLV
Trigger: AACCAGCATCTCAGAGGACAAGGCTGGACTAGCAAC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACAGTGTTCCTTCCCCTaGGAGATGAGGAAAGCCATG +
Preference number: 3 (lower is better)
Translates to: KGNEIDITALPKPWKEGEQCSFP*EMRKAM
Trigger: CATGGCTTTCCTCATCTCCAAGGGGAAGGAACACTG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 72 bp CTGGGAGGGGGTGTAACACTATCACAAAGGCCACCCTaGACTCTTGATCATCAGATAGACCAAATCCATCCC +
Preference number: 3 (lower is better)
Translates to: LGGGVTLSQRPP*TLDHQIDQIHP
Trigger: GGGATGGATTTGGTCTATCTGATGATCAAGAGTTCAGGGTGGCCTTTGTGATAGTGTTACACCCCCTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CCA 72 bp AGAGAACATGTCACAGAGCTTCAGATCAGCTGGCCATaGAGGTTTAACAAGGAAGCCATTAGGGACACCCTG +
Preference number: 3 (lower is better)
Translates to: REHVTELQISWP*RFNKEAIRDTL
Trigger: CAGGGTGTCCCTAATGGCTTCCTTGTTAAACCTCCATGGCCAGCTGATCTGAAGCTCTGTGACATGTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGGCCACACTCTGAAGTaGCGGATTTCCATGAACTCC +
Preference number: 3 (lower is better)
Translates to: KIILRPHSEVADFHELQSGHTLK*RISMNS
Trigger: GGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTACAAGGCAGTCTGCTaGGTACAGAACGAGAGAATC +
Preference number: 3 (lower is better)
Translates to: SPENILGDGITRRNEDYRYKAVC*VQNERI
Trigger: GATTCTCTCGTTCTGTACCAAGCAGACTGCCTTGTA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAGAACATATGGAACTTaGTGCCACCACACAGCTGTG +
Preference number: 3 (lower is better)
Translates to: SPENILGDGITRRNEDYRRTYGT*CHHTAV
Trigger: CACAGCTGTGTGGTGGCACAAAGTTCCATATGTTCT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATTGCAGTTGGCATTTaGACAATCAGGGGGATCTTG +
Preference number: 3 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEIAVGI*TIRGIL
Trigger: CAAGATCCCCCTGATTGTCAAAATGCCAACTGCAAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGCTTCTAGCTCTCAAATaGCAAAACCAGTGCTTACGC +
Preference number: 3 (lower is better)
Translates to: LVNERSVKGFSAILLSVKLLALK*QNQCLR
Trigger: GCGTAAGCACTGGTTTTGCAATTTGAGAGCTAGAAG...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAGATGTGGACACATCCTaGACTAGTCCTGGAATGAAA +
Preference number: 3 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEDVDTS*TSPGMK
Trigger: TTTCATTCCAGGACTAGTCAAGGATGTGTCCACATC...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 72 bp CACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCTaGATTAGGACTTCTGAGGGAGAAAGACCACCTTCT +
Preference number: 3 (lower is better)
Translates to: HSEVADFHELQS*IRTSEGERPPS
Trigger: AGAAGGTGGTCTTTCTCCCTCAGAAGTCCTAATTCAGCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR TCA 72 bp AGGGCTCTTGACAATGATCCTCCAATACAGGGACACTaGACTCACGGAGCAGTGAGAATTTCCATGATACAC +
Preference number: 3 (lower is better)
Translates to: RALDNDPPIQGH*THGAVRISMIH
Trigger: GTGTATCATGGAAATTCTCACTGCTCCGTGAGTTCAGTGTCCCTGTATTGGAGGATCATTGTCAAGAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGACCTCTGAGATGCTGGTaGTGCGCTGATGATGCCCTT +
Preference number: 3 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRPLRCW*CADDAL
Trigger: AAGGGCATCATCAGCGCACAACCAGCATCTCAGAGG...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGATGGGGAAGAACTGCTaGAACCCAGGAGTCAGATGT +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMMGKNC*NPGVRC
Trigger: ACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCAT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCAGATTCACACTAGGTaGATAGGTTCTCATCCATCC +
Preference number: 3 (lower is better)
Translates to: SPENILGDGITRRNEDYRQIHTR*IGSHPS
Trigger: GGATGGATGAGAACCTATCAACCTAGTGTGAATCTG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 72 bp GGGTGTAACACTATCACAAAGGCCACCCTGAACTCTTaGTCATCAGATAGACCAAATCCATCCCCTACTGAA +
Preference number: 3 (lower is better)
Translates to: GCNTITKATLNS*SSDRPNPSPTE
Trigger: TTCAGTAGGGGATGGATTTGGTCTATCTGATGATCAAGAGTTCAGGGTGGCCTTTGTGATAGTGTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR GCA 72 bp AATCCAATTAACAAATTAGGACAATTTCCCACCACCTaGCTCAAAAACTCCTGGCTGCCCCTATCAGCTACC +
Preference number: 3 (lower is better)
Translates to: NPINKLGQFPTT*LKNSWLPLSAT
Trigger: GGTAGCTGATAGGGGCAGCCAGGAGTTTTTGAGGCAGGTGGTGGGAAATTGTCCTAATTTGTTAATTGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGTTGCTAGTCCAGCCTaGTCCTCTGAGATGCTGGTT +
Preference number: 3 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRVASPA*SSEMLV
Trigger: AACCAGCATCTCAGAGGACAAGGCTGGACTAGCAAC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAGAAAGACCACCTTCTaGCCCGTCATTCACATTTTC +
Preference number: 3 (lower is better)
Translates to: KIILRPHSEVADFHELQSRKTTF*PVIHIF
Trigger: GAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTCT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTACAAGGCAGTCTGCTaGGTACAGAACGAGAGAATC +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMYKAVC*VQNERI
Trigger: GATTCTCTCGTTCTGTACCAAGCAGACTGCCTTGTA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGATACATTCATCACAGTaGCTGGGTATGGGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: SPENILGDGITRRNEDYRIHSSQ*LGMGQK
Trigger: TTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATACCCAATACCAATTTaGCATTCTCATCCAAGTGTC +
Preference number: 3 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEYPIPI*HSHPSV
Trigger: GACACTTGGATGAGAATGCAAAATTGGTATTGGGTA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR CCA 72 bp CAAGCACCAATTTCAGGAACACAGTCGAGCTATTCCTaGTATTGTATATCTGGTGGCCTATCCCATTTTCTG +
Preference number: 3 (lower is better)
Translates to: QAPISGTQSSYS*YCISGGLSHFL
Trigger: CAGAAAATGGGATAGGCCACCAGATATACAATACCAGGAATAGCTCGACTGTGTTCCTGAAATTGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAGAAAGACCACCTTCTaGCCCGTCATTCACATTTTC +
Preference number: 3 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERRKTTF*PVIHIF
Trigger: GAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTCT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAGATCACACAACCTTTaGGCTGAGATCTTATCTGAA +
Preference number: 3 (lower is better)
Translates to: SPENILGDGITRRNEDYRRSHNL*AEILSE
Trigger: TTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATCT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGGCATGAAGCCTATATaGGCTACTGCAAAACAACCA +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMGMKPI*ATAKQP
Trigger: TGGTTGTTTTGCAGTAGCCAATATAGGCTTCATGCC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CCA 72 bp AACACAGTCGAGCTATTCCTGGTATTGTATATCTGGTaGCCTATCCCATTTTCTGAGCCATATTGCTCAACT +
Preference number: 3 (lower is better)
Translates to: NTVELFLVLYIW*PIPFSEPYCST
Trigger: AGTTGAGCAATATGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAGGAATAGCTCGACTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAGAACACACACTTTCTaGGAAAGGCTGACCAACAAA +
Preference number: 3 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERRTHTF*ERLTNK
Trigger: TTTGTTGGTCAGCCTTTCCAAGAAAGTGTGTGTTCT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGATACATTCATCACAGTaGCTGGGTATGGGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMIHSSQ*LGMGQK
Trigger: TTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGTGTCTCATGTTCCATaGTCCAAACAAATGCCTCTT +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMVSHVP*SKQMPL
Trigger: AAGAGGCATTTGTTTGGACAATGGAACATGAGACAC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR TCA 72 bp AGTTACATTTCAGAGGAAACTATCTTCAGGAGGGCATaGAGCCTATATTGGCTACTGCAAAACAACCAGAAG +
Preference number: 3 (lower is better)
Translates to: SYISEETIFRRA*SLYWLLQNNQK
Trigger: CTTCTGGTTGTTTTGCAGTAGCCAATATAGGCTTCATGCCCTCCTGAAGATAGTTTCCTCTGAAATGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR GCA 72 bp TGTATCAGAAATCCTTCAGAAAGCCCTACCCTTAAATaGACAGCTGCTTTTCCCAACTGCAGTTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: CIRNPSESPTLK*TAAFPNCSFLF
Trigger: AAAGAGAAAACTGCAGTTGGGAAAAGCAGCTGTGCATTTAAGGGTAGGGCTTTCTGAAGGATTTCTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR GCA 72 bp CATGTTCCATTGTCCAAACAAATGCCTCTTATTTTCTaGAATGCACACCCCTGTGAAACACCTTCACAGTAT +
Preference number: 3 (lower is better)
Translates to: HVPLSKQMPLIF*NAHPCETPSQY
Trigger: ATACTGTGAAGGTGTTTCACAGGGGTGTGCATTGCAGAAAATAAGAGGCATTTGTTTGGACAATGGAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR GCA 72 bp ACTTTTCATTGGAATAATAGTGTACCACTTCAGGGATaGTGTCAAACACAGCGCTTGTCTGATTCAGTGTGT +
Preference number: 3 (lower is better)
Translates to: TFHWNNSVPLQG*CQTQRLSDSVC
Trigger: ACACACTGAATCAGACAAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTACACTATTATTCCAATGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCAATGCCTAATGATATaGGTGATTCTTAAACCTGGG +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMQCLMI*VILKPG
Trigger: CCCAGGTTTAAGAATCACCAATATCATTAGGCATTG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGATCACACAACCTTTaGGCTGAGATCTTATCTGAA +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRSHNL*AEILSE
Trigger: TTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATCT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGTGGGGCACAAAAATaGGAAATGAGAATACAGAAG +
Preference number: 3 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSGAQK*EMRIQK
Trigger: CTTCTGTATTCTCATTTCCAATTTTTGTGCCCCACT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGAGCTATTCCTGGTATaGTATATCTGGTGGCCTATC +
Preference number: 3 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRELFLV*YIWWPI
Trigger: GATAGGCCACCAGATATACAATACCAGGAATAGCTC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAAAGACCATTCCTGGTaGTATAAAATGAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERKDHSW*YKMKAG
Trigger: GCCAGCTTTCATTTTATACAACCAGGAATGGTCTTT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAGAACACACACTTTCTaGGAAAGGCTGACCAACAAA +
Preference number: 3 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRRTHTF*ERLTNK
Trigger: TTTGTTGGTCAGCCTTTCCAAGAAAGTGTGTGTTCT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR-3UTR CAA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATCAATGCCTAATGATATaGGTGATTCTTAAACCTGGG +
Preference number: 3 (lower is better)
Translates to: KTFFSPENILGDGITRRNQCLMI*VILKPG
Trigger: CCCAGGTTTAAGAATCACCAATATCATTAGGCATTG...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR TCA 72 bp AGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATaGGGACTACAGGAAAATACTTGTCTCAAGACAAAA +
Preference number: 3 (lower is better)
Translates to: REYPGRWNNSKE*GLQENTCLKTK
Trigger: TTTTGTCTTGAGACAAGTATTTTCCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp GGCCCCCACCTGGGCAGTCAGAGGAAAGCCACAGGACAGGTGATGGTGGCCGCCAGGCTGCGTGGGCCATaGAGGGGGCACGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPHLGSQRKATGQVMVAARLRGP*RGHGSG
Trigger: CCCACTCCCGTGCCCCCTCCATGGCCCACGCAGCCT...GGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACTGCCCAGGTGGGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR GCA 90 bp GTGACACAGGGACCAGATGTCACCCAGGTGGCCAGGCTGCGTGGGCCATGGAGGGGACGTGGAGGGAGCTaGCTCCCTTTCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: VTQGPDVTQVARLRGPWRGRGGS*LPFFMA
Trigger: TGCCATGAAGAAAGGGAGGCAGCTCCCTCCACGTCC...CCTCCATGGCCCACGCAGCCTGGCCACCTGGGTGACATCTGGTCCCTGTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp AGGCTGGTCCTTGTCTTGCAGAAAGTGACACAGGGACCAGATGTCACCCAGGTGGAGAGGCGCCGCCTCTaGGCCCCCACCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: RLVLVLQKVTQGPDVTQVERRRL*APTWAV
Trigger: GACTGCCCAGGTGGGGGCCCAGAGGCGGCGCCTCTC...CACCTGGGTGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR TCA 90 bp CCCCCACCTGGGCAGTCAGAGGAAAGCCACAGGACAGGTGATGGTGGCCGCCATCCATGCTCTCCTCTTTaGGGCTGGTCCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PPPGQSEESHRTGDGGRHPCSPL*GWSLSC
Trigger: GCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGG...ATGGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACTGCCCAGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR GCA 90 bp TCCACTCAAAGCTGGACTGAGAGGCGCCGCCTCTGGGCCCCCACCTGGGCAGTCGGTAACCAGCTTCTTTaGAGGGCTGTAGTCGACTCT +
Preference number: 4 (lower is better)
Translates to: STQSWTERRRLWAPTWAVGNQLL*RAVVDS
Trigger: AGAGTCGACTACAGCCCTGCAAAGAAGCTGGTTACC...GACTGCCCAGGTGGGGGCCCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp CGCCATCTCCTTCAGGACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTTGGAGGGGGCACGGGAGTaGGCACTGGAGCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: RHLLQDTMLSSLRLVLVLEGARE*ALEPGR
Trigger: ACGTCCTGGCTCCAGTGCCCACTCCCGTGCCCCCTC...CAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAGATGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR TCA 90 bp GCCTGGAAATTATGTAACTCCACTCAAAGCTGGACTGAGAGGCGCCGCCTCTGGCACTCAAAGCTGGACTaGGAGGCGCCGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AWKLCNSTQSWTERRRLWHSKLD*EAPPLG
Trigger: GCCCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTG...CCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTTACATAATTTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR TCA 90 bp GTGACACAGGGACCAGATGTCACCCAGGTGGCCAGGCTGCGTGGGCCATGGAGGCGGACTCTTTGTGGGTaGGAGCTACTGTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: VTQGPDVTQVARLRGPWRRTLCG*ELLCKQ
Trigger: CTGTTTACACAGTAGCTCTCACCCACAAAGAGTCCG...CCTCCATGGCCCACGCAGCCTGGCCACCTGGGTGACATCTGGTCCCTGTGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp GATGGGGAGGCGAGAACTGCAGGGAAGCCTGGAAATTATGTAACTCCACTCAAAGGTGGCCAGGCTGCGTaGGCCATGGAGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: DGEARTAGKPGNYVTPLKGGQAA*AMEGAR
Trigger: CCGTGCCCCCTCCATGGCCCACGCAGCCTGGCCACC...TTTGAGTGGAGTTACATAATTTCCAGGCTTCCCTGCAGTTCTCGCCTCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR GCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCCTCTTCTGCCGGTGGTaGTGCCTCACTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSLFCRW*CLTVSS
Trigger: GGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAG...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATGCATTCCCCGTGACTaGGGCGCTGGAGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLECIPRD*GAGGRG
Trigger: GCCGCGGCCTCCAGCGCCCCAGTCACGGGGAATGCA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCCACTGCATTCCCCGTaGCTGGGGCGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRPLHSP*LGRWRP
Trigger: CGGCCTCCAGCGCCCCAGTCACGGGGAATGCAGTGG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp AGGACGTGGAGGGAGCTGCCTCCCTTTCTTCATGGCATTGCTGTTAGGATGACAAAGCCACAGGACAGGTaGTGGTGGCCGCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RTWRELPPFLHGIAVRMTKPQDR*WWPPSP
Trigger: AGGAGATGGCGGCCACCATCACCTGTCCTGTGGCTT...TGTCATCCTAACAGCAATGCCATGAAGAAAGGGAGGCAGCTCCCTCCACGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGCCGGGGGCTTCCCCCTaGTCTTTCCTCCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKPGASP*SFLLRW
Trigger: CCACCGCAGGAGGAAAGAGCAGGGGGAAGCCCCCGG...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCCACGCCCGGCAGGGTaGGGTTCTCACGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSPRPAG*GSHGSG
Trigger: CCCCGAGCCGTGAGAACCCCACCCTGCCGGGCGTGG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
3UTR CAA 72 bp CAGTTGCTAGTCCAGCCTTGTCCTCTGAGATGCTGGTaGTGCGCTGATGATGCCCTTGAAGGTGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLLVQPCPLRCW*CADDALEGARG
Trigger: GCCTCTGGCACCTTCAAGGGCATCATCAGCGCACAACCAGCATCTCAGAGGACAAGGCTGGACTAGCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAGTGGGCGGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSSGRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCCGCCCACT...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAGTTCTTGCGCAATTTaGCGCCGCCGCCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGESSCAI*RRRPRA
Trigger: AGCCCGGGGGCGGCGGCGGCAAATTGCGCAAGAACT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAGTTCTTGCGGCCCTTaGCAGGACCCGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTSSCGP*QDPAQR
Trigger: GCGCTGGGCCGGGTCCTGGCAAGGGCCGCAAGAACT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATCTTTCCTCCTGCGGTaGGAGAGGCCAGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLESFLLR*ERPGPR
Trigger: CCGTGGGCCTGGCCTCTCCCACCGCAGGAGGAAAGA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGGAGCGTCGGGGCCGTaGAGCAGGCGAGCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSGASGP*SRRARK
Trigger: CTTCCTCGCTCGCCTGCTCCACGGCCCCGACGCTCC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGGGGCTCCTCCTCCGTaGCCCGGGAGTTTTTGCGGC +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTGAPPP*PGSFCG
Trigger: GCCGCAAAAACTCCCGGGCCACGGAGGAGGAGCCCC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp GCTGGTCCTTGTCTTGCAGAAAGTGACACAGGGACCAGATGTCACCCAGGTGGCGTACCTGCTGTTCCCTaGCTCACTATTTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: AGPCLAESDTGTRCHPGGVPAVP*LTISNQ
Trigger: CTGGTTCGAAATAGTGAGTCAGGGAACAGCAGGTAC...GCCACCTGGGTGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCGGCCGCCGAGTTCTTaGGGCCCTTGCCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRPPSS*GPCQDP
Trigger: CGGGTCCTGGCAAGGGCCGCAAGAACTCGGCGGCCG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CGCCATCTCCTTCAGGACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTTGTGGGGAGGCGAGAACTaGAGGGAAGCCTGGAAATTA +
Preference number: 4 (lower is better)
Translates to: RHLLQDTMLSSLRLVLVLWGGEN*REAWKL
Trigger: TAATTTCCAGGCTTCCCTGCAGTTCTCGCCTCCCCA...CAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAGATGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCGCCCAGGGCTTGCAGTaGCTGAATCTTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSAQGLQ*LNLSEA
Trigger: AGCTTCACTAAGATTCAGCCACTGCAAGCCCTGGGC...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp TCAGAAGACTGTTTATTGGACCTGGGAGGGGGTGTAACACTATCACAAAGGCCACTCTGGGCCCCCACCTaGGCAGTCAGAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SEDCLLDLGGGVTLSQRPLWAPT*AVRGKP
Trigger: TGGCTTTCCTCTGACTGCCCAGGTGGGGGCCCAGAG...TGGCCTTTGTGATAGTGTTACACCCCCTCCCAGGTCCAATAAACAGTCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp TTTGAGGCTGGTCCTTGTCTTGCAGAAAGTGACACAGGGACCAGATGTCACCCAAACTCCACTCAAAGCTaGACTGAGAGGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FEAGPCLAESDTGTRCHPNSTQS*TERRRL
Trigger: GAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTT...TGGGTGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
3UTR CAA 72 bp ATCTCTCTTCACACAGGGTCAGCGGTGGAGGGTAAGTaGAACAGAAGGCCCACTGCACAGCAGGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: ISLHTGSAVEGK*NRRPTAQQAKF
Trigger: AAACTTGGCCTGCTGTGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCGCTGACCCTGTGTGAAGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CAA 72 bp GACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTaGCAGAAAGTGACACAGGGACCAGATGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: DTMLSSLRLVLV*QKVTQGPDVTQ
Trigger: CTGGGTGACATCTGGTCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAACGGCTGATGGCACCATaGTACCAGGGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLERLMAP*YQGCFS
Trigger: GGAGAAGCAGCCCTGGTATCATGGTGCCATCAGCCG...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAGGGCTTGCAGTGGCTaGATCTTAGTGAAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSRACSG*ILVKLA
Trigger: AGCAAGCTTCACTAAGATTCAGCCACTGCAAGCCCT...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCCGCCTCCGAGTTCTTaGGCAATTTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSPPPSS*AICRRR
Trigger: GCGGCGGCGGCAAATTGCGCAAGAACTCGGAGGCGG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTTCTGCCGGTGGTGCTaGCTCACTGTCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKFCRWC*LTVSSL
Trigger: CAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCCTGAGATGCTGGTTGTaGGCTGATGATGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSLRCWL*ADDALE
Trigger: TTCAAGGGCATCATCAGCGCACAACCAGCATCTCAG...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCATCTTCAGGAGGGCATaGAGCCTATATTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSIFRRA*SLYWLL
Trigger: CAGTAGCCAATATAGGCTTCATGCCCTCCTGAAGAT...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACTCGTCTTCAACGCCTaGCCGGCCCGAGGACACCGT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERLVFNA*PARGHR
Trigger: ACGGTGTCCTCGGGCCGGGCAGGCGTTGAAGACGAG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGCGGGCGCTAGCCTCTaGTCCGGACACGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRAGASL*SGHGRR
Trigger: TCGCCTGCCGTGTCCGGAGCAGAGGCTAGCGCCCGC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATGGCCCGGGAGTTTTTaGGGCCCTTGCCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRWPGSF*GPCPRR
Trigger: CCGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGCCA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGCCCGAGCTCTTGGTTaGACCCCGGTGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNARALG*TPVGLL
Trigger: GAGGAGCCCCACCGGGGTGCAACCAAGAGCTCGGGC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATTCTGCCGGTGGTGCTaGCTCACTGTCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTFCRWC*LTVSSL
Trigger: CAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTGCAGCCCGAGCTCTTaGTTGCACCCCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMCSPSS*LHPGGA
Trigger: AGCCCCACCGGGGTGCAACCAAGAGCTCGGGCTGCA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGTGGTCCGAGAGGGCTaGCTTCAGGATCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKVVREG*LQDLLG
Trigger: ACCCAGAAGATCCTGAAGCCAGCCCTCTCGGACCAC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATTCTCTCCCTCACTGTaGTCCGAGAGGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEFSPSL*SERAGF
Trigger: GAAGCCAGCCCTCTCGGACCACAGTGAGGGAGAGAA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACTGGTCTCAAACTCCTaGCCTCACGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGELVSNS*PHVICL
Trigger: CAGGCAGATCACGTGAGGTCAGGAGTTTGAGACCAG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp GCCTGGAAATTATGTAACTCCACTCAAAGCTGGACTGAGAGGCGCCGCCTCTGGGCCACCCTGAACTCTTaGTCATCAGATAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: AWKLCNSTQSWTERRRLWATLNS*SSDRPN
Trigger: ATTTGGTCTATCTGATGATCAAGAGTTCAGGGTGGC...CCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTTACATAATTTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAAGCTGGAGCTACTGCTaGTGGGGTAGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLESWSYC*WGSCSS
Trigger: GGAAGAGCAACTACCCCAGCAGCAGTAGCTCCAGCT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp TCTCCTTCAGGACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTTGCAGAAGGGCAATGGAGTACCTaGTGTTCCCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: SPSGHHALLFEAGPCLAEGQWST*CSLTHY
Trigger: ATAGTGAGTCAGGGAACAGCAGGTACTCCATTGCCC...TTCTGCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATTGGTTGCACCCCGGTaGGGCTCCTCCTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRLVAPR*GSSSVA
Trigger: GGCCACGGAGGAGGAGCCCCACCGGGGTGCAACCAA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCAGCTCTTCTGCCGGTaGTGCTGCCTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSQLFCR*CCLTVS
Trigger: GGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGGCTTCAGGATCTTCTaGGTCCAGCTCTTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTGFRIF*VQLFCR
Trigger: CCGGCAGAAGAGCTGGACCCAGAAGATCCTGAAGCC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAAGCCTCCCGAATAGCTaGAACCACAGGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLESLPNS*NHRHPP
Trigger: TGGTGGATGCCTGTGGTTCCAGCTATTCGGGAGGCT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCCAGTCGAGCTATTCCTaGTATTGTATATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSQSSYS*YCISGG
Trigger: GCCACCAGATATACAATACCAGGAATAGCTCGACTG...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTTCCCGTTCTTCTCCTaGGTGTCCACCTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKFPFFS*VSTLMS
Trigger: GCTCATCAAGGTGGACACTCAGGAGAAGAACGGGAA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACTCTCTGCATCCCTTTaGCCCTTTGTCCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGELSASL*PFVRLA
Trigger: TGCCAAACGGACAAAGGGTCAAAGGGATGCAGAGAG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTCCTTCAAACTGGACTaGCAGAGCCCGCACGATCTG +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRSFKLD*QSPHDL
Trigger: CAGATCGTGCGGGCTCTGTCAGTCCAGTTTGAAGGA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCGGCTGATGGCACCATaGTACCAGGGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRLMAP*YQGCFS
Trigger: GGAGAAGCAGCCCTGGTATCATGGTGCCATCAGCCG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCAGCCTCAGCACGGCTaGTGGCACCATGATACCAGG +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMQPQHG*WHHDTR
Trigger: CCTGGTATCATGGTGCCATCAGCCGTGCTGAGGCTG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACCTTCCCCTTGGAGATaGGGAAAGCCATGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTPSPWR*GKPWGL
Trigger: TAAGCCCCATGGCTTTCCTCATCTCCAAGGGGAAGG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGTTTTTGCGGCCCTTaGCCGCGGCGGCCTGAATCA +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSFCGP*PRRPES
Trigger: TGATTCAGGCCGCCGCGGGCAAGGGCCGCAAAAACT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTGGCTGCTCGTACTCTaGCGCGGGCCTCTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNWLLVL*RGPLVV
Trigger: AACGACGAGAGGCCCGCGGCAGAGTACGAGCAGCCA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCTCTTCTGCCGGTGGTaGTGCCTCACTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMLFCRW*CLTVSS
Trigger: GGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAACCAGGAGTCAGATGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEPGVRC*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACATCTGACTCCTGG...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp AGTCAGAGGAAAGCCACAGGACAGGTGATGGTGGCCGCCATCTCCTTCAGGACAATGACATGGTTACGGTaGTCTTTCCAGAAGAACTTA +
Preference number: 4 (lower is better)
Translates to: SQRKATGQVMVAAISFRTMTWLR*SFQKNL
Trigger: TAAGTTCTTCTGGAAAGAGCACCGTAACCATGTCAT...TGTCCTGAAGGAGATGGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACGGAGGAAGAGGAGCTaGAGCTGGAGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERRRKRS*SWSYCC
Trigger: GCAGCAGTAGCTCCAGCTCCAGCTCCTCTTCCTCCG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCAGCTCTTCTGCCGGTaGTGCTGCCTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMQLFCR*CCLTVS
Trigger: GGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATCGGGGAGACTGAGGTaGGTGGATCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGESGRLR*VDHLRS
Trigger: TGACCTCAAATGATCCACCCACCTCAGTCTCCCCGA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGCAATGGTGCGATCATaGCTCGCTGCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSAMVRS*LAAALT
Trigger: GGTCAAGGCTGCAGCGAGCCATGATCGCACCATTGC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGCACTCCCTAAACCCTaGAAGGAGGGAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGEALPKP*KEGETR
Trigger: CCTTGTTTCTCCCTCCTTCCAGGGTTTAGGGAGTGC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATGGGGAAGAACTGCTTaGACCCAGGAGTCAGATGTT +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGEWGRTA*TQESDV
Trigger: AACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCTGGTCTCAAACTCCTaGCCTCACGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSLVSNS*PHVICL
Trigger: CAGGCAGATCACGTGAGGTCAGGAGTTTGAGACCAG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTCAGTGCAATCCTGCTaGGTGTCAAGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNSVQSC*VSRGAG
Trigger: CCCCGCACCCCTTGACACTCAGCAGGATTGCACTGA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCGGTGGAGGGTAAGTTaGACAGAAGGCCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRWRVS*TEGPLH
Trigger: GTGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TCTCCTTCAGGACACCATGCTCTCCTCTTTGAGGCTGGTCCTTGTCTTGCAGAATCACAAAGGCCACCCTaGACTCTTGATCATCAGATA +
Preference number: 4 (lower is better)
Translates to: SPSGHHALLFEAGPCLAESQRPP*TLDHQI
Trigger: TATCTGATGATCAAGAGTTCAGGGTGGCCTTTGTGA...TTCTGCAAGACAAGGACCAGCCTCAAAGAGGAGAGCATGGTGTCCTGAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAAGGATCCCTCCCCACTaGAAACAATTGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLERIPPH*KQLQPD
Trigger: ATCTGGCTGCAATTGTTTTCAGTGGGGAGGGATCCT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACTCTCCGACTCTCTCTaGATCCCTTTGACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGELSDSL*IPLTLC
Trigger: ACAAAGGGTCAAAGGGATGCAGAGAGAGTCGGAGAG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTTTCAGGCCACCGTCTaGGGGTTCACAGGGACTGTC +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMFQATV*GFTGTV
Trigger: GACAGTCCCTGTGAACCCGCAGACGGTGGCCTGAAA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACTGAGATGCTGGTTGTaGGCTGATGATGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGELRCWL*ADDALE
Trigger: TTCAAGGGCATCATCAGCGCACAACCAGCATCTCAG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATCACTCAGGCTGGAGTaGAATGGTGCGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTSLRLE*NGAIMA
Trigger: AGCCATGATCGCACCATTGCACTCCAGCCTGAGTGA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGCAATTTCCCACCACCTaGCTCAAAAACTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKQFPTT*LKNSWL
Trigger: CAGCCAGGAGTTTTTGAGGCAGGTGGTGGGAAATTG...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCTTTCAAGATGGCAACTaGTGTGTCATCATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSFQDGN*CVIIFP
Trigger: AGGGAAAATGATGACACAGCAGTTGCCATCTTGAAA...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACCTGATTGTTTCAGCTaGAGGGGCTCAGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTPDCFS*RGSASS
Trigger: TGAGGAAGCTGAGCCCCTGCAGCTGAAACAATCAGG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATTCTCTCCCTCACTGTaGTCCGAGAGGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERFSPSL*SERAGF
Trigger: GAAGCCAGCCCTCTCGGACCACAGTGAGGGAGAGAA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATTAGCTGGGAGTGGTaGTGCGAACCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEISWEW*CEPIVP
Trigger: TGGGACTATAGGTTCGCACCACCACTCCCAGCTAAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTCGGGGAGACTGAGGTaGGTGGATCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRSGRLR*VDHLRS
Trigger: TGACCTCAAATGATCCACCCACCTCAGTCTCCCCGA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAACCCTACCCCAGAGCTaGAGGCAACAGCTAAATCAT +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGETLPQS*RQQLNH
Trigger: ATGATTTAGCTGTTGCCTCCAGCTCTGGGGTAGGGT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAGCCTCCCGAATAGCTaGAACCACAGGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSSLPNS*NHRHPP
Trigger: TGGTGGATGCCTGTGGTTCCAGCTATTCGGGAGGCT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATGCCTCAAAAACTCCTaGCTGCCCCTATCAGCTACC +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTCLKNS*LPLSAT
Trigger: GGTAGCTGATAGGGGCAGCCAGGAGTTTTTGAGGCA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CAA 72 bp CTCAGCTTCCTCAGGAAGGAAATGCTGTTAGGGCTCTaGACAATGATCCTCCAATACAGGGACACTGAACTC +
Preference number: 4 (lower is better)
Translates to: LSFLRKEMLLGL*TMILQYRDTEL
Trigger: GAGTTCAGTGTCCCTGTATTGGAGGATCATTGTCAAGAGCCCTAACAGCATTTCCTTCCTGAGGAAGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTTTGGCCAAGGTCTCTaGTTTCAGGCCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMFGQGL*FQATVC
Trigger: GCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCTTGAGGTCAGGAGTTTaGGACCAGCCTGACGAAGAC +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSLRSGV*DQPDED
Trigger: GTCTTCGTCAGGCTGGTCTCAAACTCCTGACCTCAA...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGATGCTCCTGAACTCCTaGCTTAACCTTCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRMLLNS*LNLPEG
Trigger: ACCCTCAGGAAGGTTAAGTCAGGAGTTCAGGAGCAT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGGGCTAACCTTTGACTaGAAAAGGGCATCTGACAGA +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKGLTFD*KRASDR
Trigger: TCTGTCAGATGCCCTTTTTCAGTCAAAGGTTAGCCC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTGCGGGGAAGGGAAATaGAATCGACATCACTGCACT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRCGEGK*NRHHCT
Trigger: AGTGCAGTGATGTCGATTTCATTTCCCTTCCCCGCA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATCGGTGGAGGGTAAGTTaGACAGAAGGCCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNRWRVS*TEGPLH
Trigger: GTGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCG...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTTGGCTGCTCGTACTCTaGCGCGGGCCTCTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCWLLVL*RGPLVV
Trigger: AACGACGAGAGGCCCGCGGCAGAGTACGAGCAGCCA...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGAGCCCGCACGATCTaGTCCTTCTTCCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRARTI*SFFHSH
Trigger: ATGGGAGTGGAAGAAGGAGCAGATCGTGCGGGCTCT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGGGCAATGGAGTACCTaGTGTTCCCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRGQWST*CSLTHY
Trigger: ATAGTGAGTCAGGGAACAGCAGGTACTCCATTGCCC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGTACCACTTCAGGGATaGTGTCAAACACAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTVPLQG*CQTQRL
Trigger: CAAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTAC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAAAATTGCAAAACCAGTaGTTACGCCCAAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEKLQNQ*LRPSTR
Trigger: CCTCGTGCTTGGGCGTAAGCACTGGTTTTGCAATTT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGACCCTTTGTCCGTTTaGCATCATAAGGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKDPLSV*HHKGQH
Trigger: ATGCTGACCCTTATGATGCCAAACGGACAAAGGGTC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATCAGCTCCTTCAAACTaGACTGACAGAGCCCGCACG +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERSAPSN*TDRART
Trigger: CGTGCGGGCTCTGTCAGTCCAGTTTGAAGGAGCTGA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGGCTTCAGGATCTTCTaGGTCCAGCTCTTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNGFRIF*VQLFCR
Trigger: CCGGCAGAAGAGCTGGACCCAGAAGATCCTGAAGCC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTCAGCCTCAGCACGGCTaGTGGCACCATGATACCAGG +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCQPQHG*WHHDTR
Trigger: CCTGGTATCATGGTGCCATCAGCCGTGCTGAGGCTG...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGTACCTGCTGTTCCCTaGCTCACTATTTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSVPAVP*LTISNQ
Trigger: CTGGTTCGAAATAGTGAGTCAGGGAACAGCAGGTAC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTTGTTGTCTTTGGTCTaGGCCACTATGATGTGGACA +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKLLSLV*ATMMWT
Trigger: TGTCCACATCATAGTGGCTCAGACCAAAGACAACAA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTGTGTTCTGCCCCTTTaGAAGGCAACTTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKCVLPL*KATFHW
Trigger: CCAATGAAAAGTTGCCTTTCAAAGGGGCAGAACACA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAGTTTTGAGACCCAAATaGCCAACCCCAGAATACAGA +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEVLRPK*PTPEYR
Trigger: TCTGTATTCTGGGGTTGGTCATTTGGGTCTCAAAAC...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAGTTTGCAGGCCATCCTaGGATACAACTATGGTATCA +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGEVCRPS*DTTMVS
Trigger: TGATACCATAGTTGTATCTCAGGATGGCCTGCAAAC...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATGCTGCTGGGGTAGTTaGTCTTCCCGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERCCWGS*SSRSSP
Trigger: AGGAGAAGAACGGGAAGAGCAACTACCCCAGCAGCA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATAGAGCCCGCACGATCTaGTCCTTCTTCCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNRARTI*SFFHSH
Trigger: ATGGGAGTGGAAGAAGGAGCAGATCGTGCGGGCTCT...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCATCCTCTTCCAGTCTaGACCATCATGTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRHPLPV*TIMWKS
Trigger: GCTTTTCCACATGATGGTGCAGACTGGAAGAGGATG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTCACTCAGGCTGGAGTaGAATGGTGCGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSLRLE*NGAIMA
Trigger: AGCCATGATCGCACCATTGCACTCCAGCCTGAGTGA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAACTGGTGTCAAAATTaGAGTTGGCATTTTGACAAT +
Preference number: 4 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSNWCQN*SWHFDN
Trigger: ATTGTCAAAATGCCAACTGCAATTTTGACACCAGTT...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTGGAGCTACTGCTGCTaGGGTAGTTGCTCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNWSYCC*GSCSSR
Trigger: ACGGGAAGAGCAACTACCCCAGCAGCAGTAGCTCCA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCATAGTCCCACCTACTTaGGAGGCTGATGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSIVPPT*EADGEE
Trigger: TTCTTCCCCATCAGCCTCCCAAGTAGGTGGGACTAT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATGCCTCAAAAACTCCTaGCTGCCCCTATCAGCTACC +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERCLKNS*LPLSAT
Trigger: GGTAGCTGATAGGGGCAGCCAGGAGTTTTTGAGGCA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACTTACTTTAGGGCAATaGAGTACCTGCTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTLTLGQ*STCCSL
Trigger: CAGGGAACAGCAGGTACTCCATTGCCCTAAAGTAAG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATCCTCCCCTCGCATCTaGAAAGACCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERSSPRI*KDHSWL
Trigger: CAACCAGGAATGGTCTTTCCAGATGCGAGGGGAGGA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGTTGTTGTCTTTGGTCTaGGCCACTATGATGTGGACA +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRLLSLV*ATMMWT
Trigger: TGTCCACATCATAGTGGCTCAGACCAAAGACAACAA...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAACACAGCGCTTGTCTaGTTCAGTGTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGENTALV*FSVYLL
Trigger: CAACAAATACACACTGAATCAGACAAGCGCTGTGTT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGTTTTGAGACCCAAATaGCCAACCCCAGAATACAGA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTVLRPK*PTPEYR
Trigger: TCTGTATTCTGGGGTTGGTCATTTGGGTCTCAAAAC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACTGAAACTAACCAACTaGACTTGTCCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTLKLTN*TCPVIA
Trigger: TGCGATGACTGGACAAGTTCAGTTGGTTAGTTTCAG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACACTTAACCCGCAACTaGAGAATGCCTCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTHLTRN*RMPHSY
Trigger: ATAACTGTGAGGCATTCTTCAGTTGCGGGTTAAGTG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTGCGGGGAAGGGAAATaGAATCGACATCACTGCACT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMCGEGK*NRHHCT
Trigger: AGTGCAGTGATGTCGATTTCATTTCCCTTCCCCGCA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAGAATTATTTCTCTACTaGGAGGGCCTACTCCAGATT +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEELFLY*EGLLQI
Trigger: AATCTGGAGTAGGCCCTCTCAGTAGAGAAATAATTC...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAACCTGGTTGTATAAAATaGAAGCTGGCACCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEPGCIK*KLAPKA
Trigger: AGCTTTTGGTGCCAGCTTTCATTTTATACAACCAGG...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAATCAAGGAGGAGACATaGATGAGTGGGCAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERIKEET*MSGQRI
Trigger: GATCCTCTGCCCACTCATTCATGTCTCCTCCTTGAT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGGTAACCAGCTTCTTTaGAGGGCTGTAGTCGACTCT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMGNQLL*RAVVDS
Trigger: AGAGTCGACTACAGCCCTGCAAAGAAGCTGGTTACC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGTACCACTTCAGGGATaGTGTCAAACACAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERVPLQG*CQTQRL
Trigger: CAAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTAC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATCCAGGAGTCAGATGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNPGVRC*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACATCTGACTCCTGG...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAGCTGGGAGTGGTGGTaGGAACCTATAGTCCCACCT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRSWEWW*EPIVPP
Trigger: AGGTGGGACTATAGGTTCGCACCACCACTCCCAGCT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGACAGTCAGTACATTTaGATATGGGGCAGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LVNERSVKGFSAILLSVKDSQYI*IWGSFE
Trigger: CTCAAAACTGCCCCATATGCAAATGTACTGACTGTC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACAATTTCCCACCACCTaGCTCAAAAACTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERQFPTT*LKNSWL
Trigger: CAGCCAGGAGTTTTTGAGGCAGGTGGTGGGAAATTG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATGTGAAGGGTTTCAGTaGAATCCTGCTGAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTCEGFQ*NPAECQ
Trigger: TTGACACTCAGCAGGATTGCACTGAAACCCTTCACA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATGCCTCTTATTTTCTaGAATGCACACCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEMPLIF*NAHPCE
Trigger: TTCACAGGGGTGTGCATTGCAGAAAATAAGAGGCAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATTGCTGTGCATCATATaGTTCCATGTAACCGTCGTT +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLELLCII*FHVTVV
Trigger: AACGACGGTTACATGGAACCATATGATGCACAGCAA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATGGAACTCCGTCTTTTaGCCAAGGTCTCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTWNSVF*PRSLIS
Trigger: TGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATCCCCAGGAGGTCCTTaGAACTCCGTCTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRSPGGP*NSVFWP
Trigger: TGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATCAGCTCCTTCAAACTaGACTGACAGAGCCCGCACG +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRSAPSN*TDRART
Trigger: CGTGCGGGCTCTGTCAGTCCAGTTTGAAGGAGCTGA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGCCCAGGGCTTGCAGTaGCTGAATCTTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNAQGLQ*LNLSEA
Trigger: AGCTTCACTAAGATTCAGCCACTGCAAGCCCTGGGC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGATAGTCCCACCTACTTaGGAGGCTGATGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMIVPPT*EADGEE
Trigger: TTCTTCCCCATCAGCCTCCCAAGTAGGTGGGACTAT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGATTAGCTGGGAGTGGTaGTGCGAACCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMISWEW*CEPIVP
Trigger: TGGGACTATAGGTTCGCACCACCACTCCCAGCTAAT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAAAATTAGCTGGGAGTaGTGGTGCGAACCTATAGTC +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRKISWE*WCEPIV
Trigger: GACTATAGGTTCGCACCACCACTCCCAGCTAATTTT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTGCAATGGTGCGATCATaGCTCGCTGCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCAMVRS*LAAALT
Trigger: GGTCAAGGCTGCAGCGAGCCATGATCGCACCATTGC...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGAGCTTCAGATCAGCTaGCCATGGAGGTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSELQIS*PWRFNK
Trigger: CTTGTTAAACCTCCATGGCCAGCTGATCTGAAGCTC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTACACACAAGGCCAGTaGTTTGCAGGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNYTQGQ*FAGHPE
Trigger: CTCAGGATGGCCTGCAAACCACTGGCCTTGTGTGTA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGCACTCCCTAAACCCTaGAAGGAGGGAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNALPKP*KEGETR
Trigger: CCTTGTTTCTCCCTCCTTCCAGGGTTTAGGGAGTGC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
3UTR CAA 72 bp GTCTTTGGTCTGAGCCACTATGATGTGGACACATCCTaGACTAGTCCTGGAATGAAAATCAAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: VFGLSHYDVDTS*TSPGMKIKEET
Trigger: TGTCTCCTCCTTGATTTTCATTCCAGGACTAGTCAAGGATGTGTCCACATCATAGTGGCTCAGACCAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTGGTCTGAGCCACTATaGTGTGGACACATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNWSEPL*CGHILD
Trigger: GTCAAGGATGTGTCCACATCATAGTGGCTCAGACCA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCATGAACTCCAGAGCTaGATTAGGACTTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMHELQS*IRTSEG
Trigger: TCCCTCAGAAGTCCTAATTCAGCTCTGGAGTTCATG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGGGCTAACCTTTGACTaGAAAAGGGCATCTGACAGA +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERGLTFD*KRASDR
Trigger: TCTGTCAGATGCCCTTTTTCAGTCAAAGGTTAGCCC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGATCTTCAGGAGGGCATaGAGCCTATATTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMIFRRA*SLYWLL
Trigger: CAGTAGCCAATATAGGCTTCATGCCCTCCTGAAGAT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACAATGCACACCCCTGTaGAACACCTTCACAGTATGT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERQCTPL*NTFTVC
Trigger: ACATACTGTGAAGGTGTTTCACAGGGGTGTGCATTG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTTGTTCTCCTCCAGCCTaGTTGTTTCAGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCCSPPA*LFQLQG
Trigger: CCCCTGCAGCTGAAACAATCAGGCTGGAGGAGAACA...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTAGGAGGAGACATGAATaGGTGGGCAGAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCRRRHE*VGRGSL
Trigger: GAGGGATCCTCTGCCCACTCATTCATGTCTCCTCCT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGGTAACCAGCTTCTTTaGAGGGCTGTAGTCGACTCT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNGNQLL*RAVVDS
Trigger: AGAGTCGACTACAGCCCTGCAAAGAAGCTGGTTACC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTAGCTGGGAGTGGTGGTaGGAACCTATAGTCCCACCT +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCSWEWW*EPIVPP
Trigger: AGGTGGGACTATAGGTTCGCACCACCACTCCCAGCT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGAAAGACCACCTTCTTaGCCGTCATTCACATTTTCT +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTERPPS*PSFTFS
Trigger: AGAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATAGGTGCCCGCCACCGTaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNRCPPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCACGGTGGCGGGCACCT...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATCACCCAGGATGGAGTaGAGTGACATAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERSPRME*SDIILA
Trigger: AGCCAAGATTATGTCACTGCACTCCATCCTGGGTGA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTCACCCAGGATGGAGTaGAGTGACATAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMSPRME*SDIILA
Trigger: AGCCAAGATTATGTCACTGCACTCCATCCTGGGTGA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATACATTCATCACAGTTaGTGGGTATGGGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGEYIHHS*WVWAKN
Trigger: ATTTTTGGCCCATACCCAGCAACTGTGATGAATGTA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGAACAGAAGGCCCACTaGACAGCAGGCCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQREQKAH*TAGQVS
Trigger: AGAAACTTGGCCTGCTGTGCAGTGGGCCTTCTGTTC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATTTCAAGATGGCAACTaGTGTGTCATCATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEFQDGN*CVIIFP
Trigger: AGGGAAAATGATGACACAGCAGTTGCCATCTTGAAA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATGTCCTCTGAGATGCTaGTTGTGCGCTGATGATGCC +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRCPLRC*LCADDA
Trigger: GGCATCATCAGCGCACAACCAGCATCTCAGAGGACA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGTCTGCACCATCATGTaGAAAAGCCACGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSVCTIM*KSHVDF
Trigger: AAAATCCACGTGGCTTTTCCACATGATGGTGCAGAC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACAGTACATTTGCATATaGGGCAGTTTTGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTQYICI*GSFETQ
Trigger: TTGGGTCTCAAAACTGCCCCATATGCAAATGTACTG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATTCATCACAGTTGCTaGGTATGGGCCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEIHHSC*VWAKNH
Trigger: ATGATTTTTGGCCCATACCCAGCAACTGTGATGAAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATCAGATCAGCTGGCCATaGAGGTTTAACAAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNQISWP*RFNKEA
Trigger: GGCTTCCTTGTTAAACCTCCATGGCCAGCTGATCTG...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATGTCAAAATTGCAGTTaGCATTTTGACAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGECQNCS*HFDNQG
Trigger: CCCCTGATTGTCAAAATGCCAACTGCAATTTTGACA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATTCACCAGAAGAAACTaGTGTCAAAATTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEFTRRN*CQNCSW
Trigger: CCAACTGCAATTTTGACACCAGTTTCTTCTGGTGAA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR CAA 72 bp ACCAATTTCAGGAACACAGTCGAGCTATTCCTGGTATaGTATATCTGGTGGCCTATCCCATTTTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TNFRNTVELFLV*YIWWPIPFSEP
Trigger: TGGCTCAGAAAATGGGATAGGCCACCAGATATACAATACCAGGAATAGCTCGACTGTGTTCCTGAAATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
3UTR CAA 72 bp CCCACTGAAAACAATTGCAGCCAGATTCACACTAGGTaGATAGGTTCTCATCCATCCCGTAATGGTTCTACA +
Preference number: 4 (lower is better)
Translates to: PTENNCSQIHTR*IGSHPSRNGST
Trigger: TGTAGAACCATTACGGGATGGATGAGAACCTATCAACCTAGTGTGAATCTGGCTGCAATTGTTTTCAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAACACAGCGCTTGTCTaGTTCAGTGTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSNTALV*FSVYLL
Trigger: CAACAAATACACACTGAATCAGACAAGCGCTGTGTT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATGGGGAAGAACTGCTTaGACCCAGGAGTCAGATGTT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRWGRTA*TQESDV
Trigger: AACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAATGCTCCTGAACTCCTaGCTTAACCTTCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRMLLNS*LNLPEG
Trigger: ACCCTCAGGAAGGTTAAGTCAGGAGTTCAGGAGCAT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAATCATTGTGTTCCAGTaGGGAAAAGTTCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: KGNEIDITALPKPWKEGEIIVFQ*GKVPLK
Trigger: TTTAAGAGGAACTTTTCCTCACTGGAACACAATGAT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATGTCTCAAGACAAAATaGCAAAAAGCCAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTCLKTK*QKARAF
Trigger: GAATGCTCTGGCTTTTTGTCATTTTGTCTTGAGACA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCTGAAACTAACCAACTaGACTTGTCCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMLKLTN*TCPVIA
Trigger: TGCGATGACTGGACAAGTTCAGTTGGTTAGTTTCAG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGTTTGCAGGCCATCCTaGGATACAACTATGGTATCA +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERVCRPS*DTTMVS
Trigger: TGATACCATAGTTGTATCTCAGGATGGCCTGCAAAC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACACTTAACCCGCAACTaGAGAATGCCTCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERHLTRN*RMPHSY
Trigger: ATAACTGTGAGGCATTCTTCAGTTGCGGGTTAAGTG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAACGGCTAAGAACTTaGCAAAATGAGACGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMERLRT*QNETPV
Trigger: AACAGGCGTCTCATTTTGTCAAGTTCTTAGCCGTTC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAACGAGGCTACTAAGGTaGGGTAGAAACTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRTRLLR*GRNSSS
Trigger: CGAGGATGAGTTTCTACCTCACCTTAGTAGCCTCGT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAACGCATGTAATCCTTaGGTGGTTTATCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTNACNP*VVYPYH
Trigger: GTGATAAGGATAAACCACTCAAGGATTACATGCGTT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAGGGCAATGGAGTACCTaGTGTTCCCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRGQWST*CSLTHY
Trigger: ATAGTGAGTCAGGGAACAGCAGGTACTCCATTGCCC...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTTGTCCTCTGAGATGCTaGTTGTGCGCTGATGATGCC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCCPLRC*LCADDA
Trigger: GGCATCATCAGCGCACAACCAGCATCTCAGAGGACA...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATTAAGACCAAAGACTTaGCCGGGTGCAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRLRPKT*PGAVAH
Trigger: ATGAGCCACTGCACCCGGCCAAGTCTTTGGTCTTAA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGTCTGCACCATCATGTaGAAAAGCCACGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERVCTIM*KSHVDF
Trigger: AAAATCCACGTGGCTTTTCCACATGATGGTGCAGAC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGCTTCAGATCAGCTaGCCATGGAGGTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNELQIS*PWRFNK
Trigger: CTTGTTAAACCTCCATGGCCAGCTGATCTGAAGCTC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCTGGTATTGTATATCTaGTGGCCTATCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRLVLYI*WPIPFS
Trigger: AGAAAATGGGATAGGCCACCAGATATACAATACCAG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTGTACCTGCTGTTCCCTaGCTCACTATTTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCVPAVP*LTISNQ
Trigger: CTGGTTCGAAATAGTGAGTCAGGGAACAGCAGGTAC...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAAAATCCACAGAGATTaGGAGAACACACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRKIHRD*ENTHFL
Trigger: AAGAAAGTGTGTGTTCTCTCAATCTCTGTGGATTTT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAATAACTCGAAGGAATaGGGACTACAGGAAAATACT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRNNSKE*GLQENT
Trigger: AGTATTTTCCTGTAGTCCTCATTCCTTCGAGTTATT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAATGATGACCGTCTCTTaGTGCTTAATAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERMMTVS*CLIILP
Trigger: GGGCAAGATTATTAAGCAGCAAGAGACGGTCATCAT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAATCTTAGTGAAGCTTaGTGTGCACTGGGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERNLSEA*CALGRV
Trigger: TACTCTACCCAGTGCACAGCAAGCTTCACTAAGATT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGACAGTCAGTACATTTaGATATGGGGCAGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERDSQYI*IWGSFE
Trigger: CTCAAAACTGCCCCATATGCAAATGTACTGACTGTC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTGTGAAGGGTTTCAGTaGAATCCTGCTGAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNCEGFQ*NPAECQ
Trigger: TTGACACTCAGCAGGATTGCACTGAAACCCTTCACA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAGCCCTACCCTTAAATaGACAGCTGCTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRSPTLK*TAAFPN
Trigger: GTTGGGAAAAGCAGCTGTGCATTTAAGGGTAGGGCT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGCCTATATTGGCTACTaGAAAACAACCAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRAYIGY*KTTRSF
Trigger: AAAACTTCTGGTTGTTTTGCAGTAGCCAATATAGGC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGATCACACAACCTTTTaGCTGAGATCTTATCTGAAT +
Preference number: 4 (lower is better)
Translates to: SPENILGDGITRRNEDYRDHTTF*LRSYLN
Trigger: ATTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCACTGACACAGCTCTATaGATGCTAAATTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSTDTAL*MLNSRQ
Trigger: TTGCCTTGAATTTAGCATCCATAGAGCTGTGTCAGT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAATGTGGACACATCCTTaGCTAGTCTTTAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRMWTHP*LVFRAM
Trigger: CATTGCCCTAAAGACTAGTCAAGGATGTGTCCACAT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTCATGAACTCCAGAGCTaGATTAGGACTTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCHELQS*IRTSEG
Trigger: TCCCTCAGAAGTCCTAATTCAGCTCTGGAGTTCATG...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAAGAACTTGACAAAATaGGACGCCTGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: KIILRPHSEVADFHELQSKNLTK*DACFND
Trigger: ATCATTGAAACAGGCGTCTCATTTTGTCAAGTTCTT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTGCCTATCCCATTTTCTaGGCCATATTGCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCAYPIF*AILLNS
Trigger: GGAGTTGAGCAATATGGCTCAGAAAATGGGATAGGC...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATATGACCGTCTCTTGCTaGTTAATAATCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNMTVSC*LIILPL
Trigger: CAAGGGCAAGATTATTAAGCAGCAAGAGACGGTCAT...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATGTTATCATTTGCTGTaGATCATATGGTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTCYHLL*IIWFHV
Trigger: TACATGGAACCATATGATGCACAGCAAATGATAACA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR GCA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCACAAATACCAATTCTaGAAAGTACGGAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: QGKFTERHSSHQRISWEMHKYQF*KVRRLP
Trigger: TGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTAGCCCTACCCTTAAATaGACAGCTGCTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCSPTLK*TAAFPN
Trigger: GTTGGGAAAAGCAGCTGTGCATTTAAGGGTAGGGCT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGACCCACTGAAAACAATTaGAGCCAGATTCACACTAGG +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRPTENN*SQIHTR
Trigger: CCTAGTGTGAATCTGGCTGCAATTGTTTTCAGTGGG...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTAGCCTCCCAAATTGTTaGGATTACGTGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCSLPNC*DYVHEP
Trigger: TGGCTCATGCACGTAATCCCAACAATTTGGGAGGCT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAATAACTCGAAGGAATaGGGACTACAGGAAAATACT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERNNSKE*GLQENT
Trigger: AGTATTTTCCTGTAGTCCTCATTCCTTCGAGTTATT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAAAGAACTTGACAAAATaGGACGCCTGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERKNLTK*DACFND
Trigger: ATCATTGAAACAGGCGTCTCATTTTGTCAAGTTCTT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTGAACGGCTAAGAACTTaGCAAAATGAGACGCCTGTT +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCERLRT*QNETPV
Trigger: AACAGGCGTCTCATTTTGTCAAGTTCTTAGCCGTTC...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATCAATCAGGGGGATCTTaGTTTATTAAAGTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNQSGGS*FIKVPN
Trigger: ATTGGGGACTTTAATAAATCAAGATCCCCCTGATTG...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAATCTTAGTGAAGCTTaGTGTGCACTGGGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRNLSEA*CALGRV
Trigger: TACTCTACCCAGTGCACAGCAAGCTTCACTAAGATT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATTACATTCATCACAGTTaGTGGGTATGGGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KTFFSPENILGDGITRRNYIHHS*WVWAKN
Trigger: ATTTTTGGCCCATACCCAGCAACTGTGATGAATGTA...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR GCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTACATATGGAACTTTGTaGCACCACACAGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCTYGTL*HHTAVN
Trigger: GTTCACAGCTGTGTGGTGGCACAAAGTTCCATATGT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGCCTATATTGGCTACTaGAAAACAACCAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERAYIGY*KTTRSF
Trigger: AAAACTTCTGGTTGTTTTGCAGTAGCCAATATAGGC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAATTCATCACAGTTGCTaGGTATGGGCCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRIHHSC*VWAKNH
Trigger: ATGATTTTTGGCCCATACCCAGCAACTGTGATGAAT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CCA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAACTGACACAGCTCTATaGATGCTAAATTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRTDTAL*MLNSRQ
Trigger: TTGCCTTGAATTTAGCATCCATAGAGCTGTGTCAGT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTTGTCTCAAGACAAAATaGCAAAAAGCCAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCCLKTK*QKARAF
Trigger: GAATGCTCTGGCTTTTTGTCATTTTGTCTTGAGACA...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR TCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTATCATTGTGTTCCAGTaGGGAAAAGTTCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCIIVFQ*GKVPLK
Trigger: TTTAAGAGGAACTTTTCCTCACTGGAACACAATGAT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR GCA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTACCCAATACCAATTTTaGATTCTCATCCAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCTQYQF*ILIQVS
Trigger: AGACACTTGGATGAGAATGCAAAATTGGTATTGGGT...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS GCA 90 bp GGCTGTCGCGGGACAGCCGGCTGTCCTTGGGGCCGACGCCGGCCCTaGCGCTCCCCAGCTCGGCCGCCGAGTTCTTGCGGCCCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: GCRGTAGCPWGRRRP*RSPARPPSSCGPCQ
Trigger: CTGGCAAGGGCCGCAAGAACTCGGCGGCCGAGCTGGGGAGCGGCAGGGCCGGCGTCGGCCCCAAGGACAGCCGGCTGTCCCGCGACAGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 90 bp CAGGACCCGGCCCAGCGCCGCCCGCCTCCGAGTTCTTGCGCAATTTaGCGCCGCCGCCCCCGGGCTTGGCCCGCTCCGACACGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: QDPAQRRPPPSSCAI*RRRPRAWPAPTRSS
Trigger: TGAAGACCGTGTCGGAGCGGGCCAAGCCCGGGGGCGGCGGCGGCAAATTGCGCAAGAACTCGGAGGCGGGCGGCGCTGGGCCGGGTCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 90 bp CCCGGTGGGGCTCCTCCTCCGTGGCCCGGGAGTTTTTGCGGCCCTTaGCCGCGGCGGCCTGAATCAGACCCTGCAGGCTGTCGCGGGACA +
Preference number: 5 (lower is better)
Translates to: PGGAPPPWPGSFCGP*PRRPESDPAGCRGT
Trigger: TGTCCCGCGACAGCCTGCAGGGTCTGATTCAGGCCGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGCCACGGAGGAGGAGCCCCACCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS TCA 90 bp TCCTCCGTGGCCCGGGAGTTTTTGCGGCCCTTGCCCGCGGCGGCCTaGATCAGACCCTGCAGGCTGTCGCGGGACAGCCGGCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSVAREFLRPLPAAA*IRPCRLSRDSRLSL
Trigger: CAAGGACAGCCGGCTGTCCCGCGACAGCCTGCAGGGTCTGATTCAGGCCGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGCCACGGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp GGCCCCCACCTGGGCAGTCAGAGGAAAGCCACAGGACAGGTGATGGTGGCCGCCAGGCTGGTCCTTGTCTaGCAGAAAGTGACACAGGGA +
Preference number: 5 (lower is better)
Translates to: GPHLGSQRKATGQVMVAARLVLV*QKVTQG
Trigger: TCCCTGTGTCACTTTCTGCAAGACAAGGACCAGCCT...GGCGGCCACCATCACCTGTCCTGTGGCTTTCCTCTGACTGCCCAGGTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS GCA 90 bp AGGGCTGGCTTCAGGATCTTCTGGGTCCAGCTCTTCTGCCGGTGGTaGTGCCTCACTGTCTCCTCCCTGAAGGAAGGTCGCTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RAGFRIFWVQLFCRW*CLTVSSLKEGRSAP
Trigger: AGGAGCTGAGCGACCTTCCTTCAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTGGACCCAGAAGATCCTGAAGCCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS CCA 90 bp GAGAGGGCTGGCTTCAGGATCTTCTGGGTCCAGCTCTTCTGCCGGTaGTGCTGCCTCACTGTCTCCTCCCTGAAGGAAGGTCGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ERAGFRIFWVQLFCR*CCLTVSSLKEGRSA
Trigger: AGCTGAGCGACCTTCCTTCAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTGGACCCAGAAGATCCTGAAGCCAGCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS CCA 90 bp TTCTCTCCCTCACTGTGGTCCGAGAGGGCTGGCTTCAGGATCTTCTaGGTCCAGCTCTTCTGCCGGTGGTGCTGCCTCACTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FSPSLWSERAGFRIF*VQLFCRWCCLTVSS
Trigger: GGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTGGACCCAGAAGATCCTGAAGCCAGCCCTCTCGGACCACAGTGAGGGAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS GCA 90 bp GCTGGCTTCAGGATCTTCTGGGTCCAGCTCTTCTGCCGGTGGTGCTaGCTCACTGTCTCCTCCCTGAAGGAAGGTCGCTCAGCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: AGFRIFWVQLFCRWC*LTVSSLKEGRSAPS
Trigger: TGAAGGAGCTGAGCGACCTTCCTTCAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTGGACCCAGAAGATCCTGAAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS CCA 90 bp ATAGCTGTGGCGGCTTCCCCAGGAGGTCCTTGGAACTCCGTCTTTTaGCCAAGGTCTCTGATTTCAGGCCACCGTCTGCGGGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: IAVAASPGGPWNSVF*PRSLISGHRLRVHR
Trigger: CCTGTGAACCCGCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGCCACAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGACAGCCGGCTGTCCTaGGGGCCGACGCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SPENILGDGITRRNEDYRDSRLS*GPTPAL
Trigger: CAGGGCCGGCGTCGGCCCCAAGGACAGCCGGCTGTC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS TCA 90 bp CTTCCCCAGGAGGTCCTTGGAACTCCGTCTTTTGGCCAAGGTCTCTaGTTTCAGGCCACCGTCTGCGGGTTCACAGGGACTGTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: LPQEVLGTPSFGQGL*FQATVCGFTGTVKQ
Trigger: CTGCTTGACAGTCCCTGTGAACCCGCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CCA 90 bp CGTAGGGAGTGTCGTATAGCTGTGGCGGCTTCCCCAGGAGGTCCTTaGAACTCCGTCTTTTGGCCAAGGTCTCTGATTTCAGGCCACCGT +
Preference number: 5 (lower is better)
Translates to: RRECRIAVAASPGGP*NSVFWPRSLISGHR
Trigger: ACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGCCACAGCTATACGACACTCCCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATCGGCCGCCGAGTTCTaGCGGCCCTTGCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLESAAEF*RPLPGP
Trigger: GGGTCCTGGCAAGGGCCGCAAGAACTCGGCGGCCGA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAGTGGCCCGGGAGTTTTaGCGGCCCTTGCCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTVAREF*RPLPAA
Trigger: CGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGCCAC...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAACTGCAGCCCGAGCTCTaGGTTGCACCCCGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KGNEIDITALPKPWKEGELQPEL*VAPRWG
Trigger: GCCCCACCGGGGTGCAACCAAGAGCTCGGGCTGCAG...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CCA 90 bp GATTTCAGGCCACCGTCTGCGGGTTCACAGGGACTGTCAAGCAGCTaGAGAGCCTTCACCAGGGGATCTTTGGAACCCCGTCGTCTAATT +
Preference number: 5 (lower is better)
Translates to: DFRPPSAGSQGLSSS*RAFTRGSLEPRRLI
Trigger: AATTAGACGACGGGGTTCCAAAGATCCCCTGGTGAAGGCTCTCCAGCTGCTTGACAGTCCCTGTGAACCCGCAGACGGTGGCCTGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGAGTTCTTGCGCAATTaGCCGCCGCCGCCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SPENILGDGITRRNEDYREFLRN*PPPPPG
Trigger: GCCCGGGGGCGGCGGCGGCAAATTGCGCAAGAACTC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAGCCCGAGCTCTTGGTaGCACCCCGGTGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: KGNEIDITALPKPWKEGESPSSW*HPGGAP
Trigger: AGGAGCCCCACCGGGGTGCAACCAAGAGCTCGGGCT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACCCGCCTCCGAGTTCTaGCGCAATTTGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERPASEF*RNLPPP
Trigger: CGGCGGCGGCAAATTGCGCAAGAACTCGGAGGCGGG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGTTCTTGCGGCCCTaGCCAGGACCCGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: KTFFSPENILGDGITRRNEFLRP*PGPGPA
Trigger: CGCTGGGCCGGGTCCTGGCAAGGGCCGCAAGAACTC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp GCCTGGAAATTATGTAACTCCACTCAAAGCTGGACTGAGAGGCGCCGCCTCTGGTCAGAAGACTGTTTATaGGACCTGGGAGGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: AWKLCNSTQSWTERRRLWSEDCL*DLGGGV
Trigger: TACACCCCCTCCCAGGTCCAATAAACAGTCTTCTGA...CCAGAGGCGGCGCCTCTCAGTCCAGCTTTGAGTGGAGTTACATAATTTCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAATTCCCCAGGAGGTCCTaGGAACTCCGTCTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: KGNEIDITALPKPWKEGEFPRRS*ELRLLA
Trigger: GGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAA...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp TCCCATTTTCTGAGCCATATTGCTCAACTCCCCCGCCCGACTCTGTTCTCCTCCAGAACATATGGAACTTaGTGCCACCACACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SHFLSHIAQLPRPTLFSSRTYGT*CHHTAV
Trigger: CACAGCTGTGTGGTGGCACAAAGTTCCATATGTTCT...GGAGGAGAACAGAGTCGGGCGGGGGAGTTGAGCAATATGGCTCAGAAAATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGCGGTGGAGGGTAAGTaGAACAGAAGGCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: SPENILGDGITRRNEDYRAVEGK*NRRPTA
Trigger: TGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCGC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACATTAATAATCTTGCCCTaGTCCAGCTCGGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTLIILP*SSSGPR
Trigger: CCTGGGGCCCGAGCTGGACAAGGGCAAGATTATTAA...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTGCTGCTTAATAATCTaGCCCTTGTCCAGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LVNERSVKGFSAILLSVKCCLII*PLSSSG
Trigger: GCCCGAGCTGGACAAGGGCAAGATTATTAAGCAGCA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGTCTCTCTGCATCCCTTaGACCCTTTGTCCGTTTGGC +
Preference number: 5 (lower is better)
Translates to: LVNERSVKGFSAILLSVKSLCIP*TLCPFG
Trigger: GCCAAACGGACAAAGGGTCAAAGGGATGCAGAGAGA...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGCCTCTGAGATGCTGGTaGTGCGCTGATGATGCCCTT +
Preference number: 5 (lower is better)
Translates to: SPENILGDGITRRNEDYRPLRCW*CADDAL
Trigger: AAGGGCATCATCAGCGCACAACCAGCATCTCAGAGG...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACACACAAGGCCAGTGGTTaGCAGGCCATCCTGAGATAC +
Preference number: 5 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTHKASG*QAILRY
Trigger: GTATCTCAGGATGGCCTGCAAACCACTGGCCTTGTG...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATTCACCAGGGGATCTTaGGAACCCCGTCGTCTAATT +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEFTRGS*EPRRLI
Trigger: AATTAGACGACGGGGTTCCAAAGATCCCCTGGTGAA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACCAGAGGCCCAGGGCTaGCAGTGGCTGAATCTTAGT +
Preference number: 5 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERPEAQG*QWLNLS
Trigger: ACTAAGATTCAGCCACTGCAAGCCCTGGGCCTCTGG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCCAGAGGCCCAGGGCTaGCAGTGGCTGAATCTTAGT +
Preference number: 5 (lower is better)
Translates to: QGKFTERHSSHQRISWEMPEAQG*QWLNLS
Trigger: ACTAAGATTCAGCCACTGCAAGCCCTGGGCCTCTGG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATGGGGAAGAACTGCTaGAACCCAGGAGTCAGATGT +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEMGKNC*NPGVRC
Trigger: ACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCACAAGGCCAGTGGTTaGCAGGCCATCCTGAGATAC +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSHKASG*QAILRY
Trigger: GTATCTCAGGATGGCCTGCAAACCACTGGCCTTGTG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAGCGGTGGAGGGTAAGTaGAACAGAAGGCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERAVEGK*NRRPTA
Trigger: TGCAGTGGGCCTTCTGTTCAACTTACCCTCCACCGC...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGAGAACATATGGAACTTaGTGCCACCACACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LVNERSVKGFSAILLSVKRTYGT*CHHTAV
Trigger: CACAGCTGTGTGGTGGCACAAAGTTCCATATGTTCT...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp GATGGGGAGGCGAGAACTGCAGGGAAGCCTGGAAATTATGTAACTCCACTCAAATTAGGTAGGAAAAACTaGGGACACAGCCATCCACAT +
Preference number: 5 (lower is better)
Translates to: DGEARTAGKPGNYVTPLKLGRKN*GHSHPH
Trigger: ATGTGGATGGCTGTGTCCCAAGTTTTTCCTACCTAA...TTTGAGTGGAGTTACATAATTTCCAGGCTTCCCTGCAGTTCTCGCCTCCCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486773.1
CDS-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATTCAGGGGGAACTCCTaGAACCACTTGGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRFRGNS*NHLAAM
Trigger: CATGGCGGCCAAGTGGTTCAAGGAGTTCCCCCTGAA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATCCTCTGAGATGCTGGTaGTGCGCTGATGATGCCCTT +
Preference number: 5 (lower is better)
Translates to: KTFFSPENILGDGITRRNPLRCW*CADDAL
Trigger: AAGGGCATCATCAGCGCACAACCAGCATCTCAGAGG...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGGCCACACTCTGAAGTaGCGGATTTCCATGAACTCC +
Preference number: 5 (lower is better)
Translates to: QGKFTERHSSHQRISWEMGHTLK*RISMNS
Trigger: GGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCC...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAACTAACCAACTGAACTaGTCCAGTCATCGCAAGCAA +
Preference number: 5 (lower is better)
Translates to: KGNEIDITALPKPWKEGETNQLN*SSHRKQ
Trigger: TTGCTTGCGATGACTGGACAAGTTCAGTTGGTTAGT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAACTAACCAACTGAACTaGTCCAGTCATCGCAAGCAA +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLETNQLN*SSHRKQ
Trigger: TTGCTTGCGATGACTGGACAAGTTCAGTTGGTTAGT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGGCATGAAGCCTATATaGGCTACTGCAAAACAACCA +
Preference number: 5 (lower is better)
Translates to: LVNERSVKGFSAILLSVKGMKPI*ATAKQP
Trigger: TGGTTGTTTTGCAGTAGCCAATATAGGCTTCATGCC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAATTGCAGTTGGCATTTaGACAATCAGGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: KGNEIDITALPKPWKEGEIAVGI*TIRGIL
Trigger: CAAGATCCCCCTGATTGTCAAAATGCCAACTGCAAT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCTTGGAACTCCGTCTTTaGGCCAAGGTCTCTGATTTC +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSLELRL*AKVSDF
Trigger: GAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAA...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAATGTCAAACACAGCGCTaGTCTGATTCAGTGTGTATT +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLECQTQR*SDSVCI
Trigger: AATACACACTGAATCAGACAAGCGCTGTGTTTGACA...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGTTGCTAGTCCAGCCTaGTCCTCTGAGATGCTGGTT +
Preference number: 5 (lower is better)
Translates to: KTFFSPENILGDGITRRNVASPA*SSEMLV
Trigger: AACCAGCATCTCAGAGGACAAGGCTGGACTAGCAAC...ATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGAATGGGGAAGAACTGCTaGAACCCAGGAGTCAGATGT +
Preference number: 5 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERMGKNC*NPGVRC
Trigger: ACATCTGACTCCTGGGTTCAAGCAGTTCTTCCCCAT...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAAGAACACACACTTTCTaGGAAAGGCTGACCAACAAA +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLERTHTF*ERLTNK
Trigger: TTTGTTGGTCAGCCTTTCCAAGAAAGTGTGTGTTCT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAATACATTCATCACAGTaGCTGGGTATGGGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEIHSSQ*LGMGQK
Trigger: TTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CTAGTGAACGAGAGATCTGTGAAGGGTTTCAGTGCAATCCTGCTGAGTGTCAAGGTGTCTCATGTTCCATaGTCCAAACAAATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LVNERSVKGFSAILLSVKVSHVP*SKQMPL
Trigger: AAGAGGCATTTGTTTGGACAATGGAACATGAGACAC...CTTGACACTCAGCAGGATTGCACTGAAACCCTTCACAGATCTCTCGTTCACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGGAGCTATTCCTGGTATaGTATATCTGGTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: SPENILGDGITRRNEDYRELFLV*YIWWPI
Trigger: GATAGGCCACCAGATATACAATACCAGGAATAGCTC...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp TCACCAGAGAATATCCTGGGAGATGGAATAACTCGAAGGAATGAGGACTACAGGAATGATGACCGTCTCTaGCTGCTTAATAATCTTGCC +
Preference number: 5 (lower is better)
Translates to: SPENILGDGITRRNEDYRNDDRL*LLNNLA
Trigger: GGCAAGATTATTAAGCAGCAAGAGACGGTCATCATT...CCTGTAGTCCTCATTCCTTCGAGTTATTCCATCTCCCAGGATATTCTCTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCATCCCTTTGACCCTTaGTCCGTTTGGCATCATAAG +
Preference number: 5 (lower is better)
Translates to: QGKFTERHSSHQRISWEMHPFDP*SVWHHK
Trigger: CTTATGATGCCAAACGGACAAAGGGTCAAAGGGATG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS-3UTR CAA 90 bp CGGCAGAGGCTAGTACACAAATACCAATTCTGCAAAGTACGGAGACTTCCAACAAGAACACACACTTTCTaGGAAAGGCTGACCAACAAA +
Preference number: 5 (lower is better)
Translates to: RQRLVHKYQFCKVRRLPTRTHTF*ERLTNK
Trigger: TTTGTTGGTCAGCCTTTCCAAGAAAGTGTGTGTTCT...TGTTGGAAGTCTCCGTACTTTGCAGAATTGGTATTTGTGTACTAGCCTCTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGATACAAGGCAGTCTGCTaGGTACAGAACGAGAGAATC +
Preference number: 5 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERYKAVC*VQNERI
Trigger: GATTCTCTCGTTCTGTACCAAGCAGACTGCCTTGTA...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAGGGAAATGAAATCGACATCACTGCACTCCCTAAACCCTGGAAGGAGGGAGAAAGATCACACAACCTTTaGGCTGAGATCTTATCTGAA +
Preference number: 5 (lower is better)
Translates to: KGNEIDITALPKPWKEGERSHNL*AEILSE
Trigger: TTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATCT...TTCTCCCTCCTTCCAGGGTTTAGGGAGTGCAGTGATGTCGATTTCATTTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCATGCTGTTAGGGCTCTaGACAATGATCCTCCAATAC +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSMLLGL*TMILQY
Trigger: GTATTGGAGGATCATTGTCAAGAGCCCTAACAGCAT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp TGCACAGCAGGCCAAGTTTCTCTAGTCCACGTTAGTGGGGCACAAAAATTGGAAAAAGACCATTCCTGGTaGTATAAAATGAAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: CTAGQVSLVHVSGAQKLEKDHSW*YKMKAG
Trigger: GCCAGCTTTCATTTTATACAACCAGGAATGGTCTTT...TTCCAATTTTTGTGCCCCACTAACGTGGACTAGAGAAACTTGGCCTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCAGATTCACACTAGGTaGATAGGTTCTCATCCATCC +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSQIHTR*IGSHPS
Trigger: GGATGGATGAGAACCTATCAACCTAGTGTGAATCTG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCGATGTGGACACATCCTaGACTAGTCCTGGAATGAAA +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSDVDTS*TSPGMK
Trigger: TTTCATTCCAGGACTAGTCAAGGATGTGTCCACATC...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGAGAAAGACCACCTTCTaGCCCGTCATTCACATTTTC +
Preference number: 5 (lower is better)
Translates to: QGKFTERHSSHQRISWEMRKTTF*PVIHIF
Trigger: GAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTCT...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTGGCCACACTCTGAAGTaGCGGATTTCCATGAACTCC +
Preference number: 5 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCGHTLK*RISMNS
Trigger: GGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCC...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGCTTCTAGCTCTCAAATaGCAAAACCAGTGCTTACGC +
Preference number: 5 (lower is better)
Translates to: QGKFTERHSSHQRISWEMLLALK*QNQCLR
Trigger: GCGTAAGCACTGGTTTTGCAATTTGAGAGCTAGAAG...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS-3UTR CAA 90 bp CAAGGCAAATTCACTGAAAGACATTCTTCTCACCAGAGAATATCCTGGGAGATGTGTCAAACACAGCGCTaGTCTGATTCAGTGTGTATT +
Preference number: 5 (lower is better)
Translates to: QGKFTERHSSHQRISWEMCQTQR*SDSVCI
Trigger: AATACACACTGAATCAGACAAGCGCTGTGTTTGACA...CATCTCCCAGGATATTCTCTGGTGAGAAGAATGTCTTTCAGTGAATTTGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCCAATGCCTAATGATATaGGTGATTCTTAAACCTGGG +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSQCLMI*VILKPG
Trigger: CCCAGGTTTAAGAATCACCAATATCATTAGGCATTG...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGATACAAGGCAGTCTGCTaGGTACAGAACGAGAGAATC +
Preference number: 5 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRYKAVC*VQNERI
Trigger: GATTCTCTCGTTCTGTACCAAGCAGACTGCCTTGTA...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp AAAATAATCCTTAGGCCACACTCTGAAGTTGCGGATTTCCATGAACTCCAGAGCAGATCACACAACCTTTaGGCTGAGATCTTATCTGAA +
Preference number: 5 (lower is better)
Translates to: KIILRPHSEVADFHELQSRSHNL*AEILSE
Trigger: TTCAGATAAGATCTCAGCCAAAAGGTTGTGTGATCT...GCTCTGGAGTTCATGGAAATCCGCAACTTCAGAGTGTGGCCTAAGGATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAGAAAGACCACCTTCTaGCCCGTCATTCACATTTTC +
Preference number: 5 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRRKTTF*PVIHIF
Trigger: GAAAATGTGAATGACGGGCAAGAAGGTGGTCTTTCT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp GGTCTTTTCAAACACTTCTGTATAGTACAAGGCAGTCTGCTTGGTACAGAACGACAATGCCTAATGATATaGGTGATTCTTAAACCTGGG +
Preference number: 5 (lower is better)
Translates to: GLFKHFCIVQGSLLGTERQCLMI*VILKPG
Trigger: CCCAGGTTTAAGAATCACCAATATCATTAGGCATTG...TCGTTCTGTACCAAGCAGACTGCCTTGTACTATACAGAAGTGTTTGAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp ATACATTCATCACAGTTGCTGGGTATGGGCCAAAAATCATTTAGTGCACAAAGAAGTGGGGCACAAAAATaGGAAATGAGAATACAGAAG +
Preference number: 5 (lower is better)
Translates to: IHSSQLLGMGQKSFSAQRSGAQK*EMRIQK
Trigger: CTTCTGTATTCTCATTTCCAATTTTTGTGCCCCACT...TCTTTGTGCACTAAATGATTTTTGGCCCATACCCAGCAACTGTGATGAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS-3UTR CAA 90 bp CATTTACCCAATACCAATTTTGCATTCTCATCCAAGTGTCTCATGTTCCATTGTTACCCAATACCAATTTaGCATTCTCATCCAAGTGTC +
Preference number: 5 (lower is better)
Translates to: HLPNTNFAFSSKCLMFHCYPIPI*HSHPSV
Trigger: GACACTTGGATGAGAATGCAAAATTGGTATTGGGTA...ACAATGGAACATGAGACACTTGGATGAGAATGCAAAATTGGTATTGGGTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS GCA 72 bp GGGACAGCCGGCTGTCCTTGGGGCCGACGCCGGCCCTaGCGCTCCCCAGCTCGGCCGCCGAGTTCTTGCGGC +
Preference number: 6 (lower is better)
Translates to: GTAGCPWGRRRP*RSPARPPSSCG
Trigger: GCCGCAAGAACTCGGCGGCCGAGCTGGGGAGCGGCAGGGCCGGCGTCGGCCCCAAGGACAGCCGGCTGTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS TCA 72 bp GCCCGGGAGTTTTTGCGGCCCTTGCCCGCGGCGGCCTaGATCAGACCCTGCAGGCTGTCGCGGGACAGCCGG +
Preference number: 6 (lower is better)
Translates to: AREFLRPLPAAA*IRPCRLSRDSR
Trigger: CCGGCTGTCCCGCGACAGCCTGCAGGGTCTGATTCAGGCCGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 72 bp CCCGGTGGGGCTCCTCCTCCGTGGCCCGGGAGTTTTTaGGGCCCTTGCCCGCGGCGGCCTGAATCAGACCCT +
Preference number: 6 (lower is better)
Translates to: PGGAPPPWPGSF*GPCPRRPESDP
Trigger: AGGGTCTGATTCAGGCCGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGCCACGGAGGAGGAGCCCCACCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 72 bp GCTCCTCCTCCGTGGCCCGGGAGTTTTTGCGGCCCTTaGCCGCGGCGGCCTGAATCAGACCCTGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: APPPWPGSFCGP*PRRPESDPAGC
Trigger: ACAGCCTGCAGGGTCTGATTCAGGCCGCCGCGGGCAAGGGCCGCAAAAACTCCCGGGCCACGGAGGAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 72 bp CCTGTTGATGTAGGTGCTGCAGCCCGAGCTCTTGGTTaGACCCCGGTGGGGCTCCTCCTCCGTGGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: PVDVGAAARALG*TPVGLLLRGPG
Trigger: TCCCGGGCCACGGAGGAGGAGCCCCACCGGGGTGCAACCAAGAGCTCGGGCTGCAGCACCTACATCAACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CCA 72 bp AGGGGCAGGCCCGGGTCCACTTTCTCTCCCTCACTGTaGTCCGAGAGGGCTGGCTTCAGGATCTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RGRPGSTFSPSL*SERAGFRIFWV
Trigger: GACCCAGAAGATCCTGAAGCCAGCCCTCTCGGACCACAGTGAGGGAGAGAAAGTGGACCCGGGCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS TCA 72 bp TGCAGGGCTGTAGTCGACTCTCAGCCTCAGCACGGCTaGTGGCACCATGATACCAGGGCTGCTTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: CRAVVDSQPQHG*WHHDTRAASPG
Trigger: CCCTGGAGAAGCAGCCCTGGTATCATGGTGCCATCAGCCGTGCTGAGGCTGAGAGTCGACTACAGCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS CCA 72 bp CCACCGTCTGCGGGTTCACAGGGACTGTCAAGCAGCTaGAGAGCCTTCACCAGGGGATCTTTGGAACCCCGT +
Preference number: 6 (lower is better)
Translates to: PPSAGSQGLSSS*RAFTRGSLEPR
Trigger: ACGGGGTTCCAAAGATCCCCTGGTGAAGGCTCTCCAGCTGCTTGACAGTCCCTGTGAACCCGCAGACGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CCA 72 bp GCGGCTTCCCCAGGAGGTCCTTGGAACTCCGTCTTTTaGCCAAGGTCTCTGATTTCAGGCCACCGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: AASPGGPWNSVF*PRSLISGHRLR
Trigger: CCGCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 72 bp GGCGGCTTCCCCAGGAGGTCCTTGGAACTCCGTCTTTaGGCCAAGGTCTCTGATTTCAGGCCACCGTCTGCG +
Preference number: 6 (lower is better)
Translates to: GGFPRRSLELRL*AKVSDFRPPSA
Trigger: CGCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 72 bp TTCAGGATCTTCTGGGTCCAGCTCTTCTGCCGGTGGTaGTGCCTCACTGTCTCCTCCCTGAAGGAAGGTCGC +
Preference number: 6 (lower is better)
Translates to: FRIFWVQLFCRW*CLTVSSLKEGR
Trigger: GCGACCTTCCTTCAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGAGCTGGACCCAGAAGATCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS CAA 90 bp TATAGCTGTGGCGGCTTCCCCAGGAGGTCCTTGGAACTCCGTCTTTaGGCCAAGGTCTCTGATTTCAGGCCACCGTCTGCGGGTTCACAG +
Preference number: 6 (lower is better)
Translates to: YSCGGFPRRSLELRL*AKVSDFRPPSAGSQ
Trigger: CTGTGAACCCGCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGCCACAGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS TCA 72 bp TCTTCTGCCGGTGGTGCTGCCTCACTGTCTCCTCCCTaGAGGAAGGTCGCTCAGCTCCTTCAAACTGGACTG +
Preference number: 6 (lower is better)
Translates to: SSAGGAASLSPP*RKVAQLLQTGL
Trigger: CAGTCCAGTTTGAAGGAGCTGAGCGACCTTCCTTCAGGGAGGAGACAGTGAGGCAGCACCACCGGCAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304760.3
ENST00000555188.5
CDS TCA 72 bp GAGGTCCTTGGAACTCCGTCTTTTGGCCAAGGTCTCTaGTTTCAGGCCACCGTCTGCGGGTTCACAGGGACT +
Preference number: 6 (lower is better)
Translates to: EVLGTPSFGQGL*FQATVCGFTGT
Trigger: AGTCCCTGTGAACCCGCAGACGGTGGCCTGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 72 bp GTGTCGTATAGCTGTGGCGGCTTCCCCAGGAGGTCCTaGGAACTCCGTCTTTTGGCCAAGGTCTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: VSYSCGGFPRRS*ELRLLAKVSDF
Trigger: GAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGCCACAGCTATACGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 72 bp CTGACTCACTATTTCGAACCAGGTAACCAGCTTCTTTaGAGGGCTGTAGTCGACTCTCAGCCTCAGCACGGC +
Preference number: 6 (lower is better)
Translates to: LTHYFEPGNQLL*RAVVDSQPQHG
Trigger: GCCGTGCTGAGGCTGAGAGTCGACTACAGCCCTGCAAAGAAGCTGGTTACCTGGTTCGAAATAGTGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304760.3
ENST00000486773.1
ENST00000555188.5
CDS CCA 72 bp TGTCGTATAGCTGTGGCGGCTTCCCCAGGAGGTCCTTaGAACTCCGTCTTTTGGCCAAGGTCTCTGATTTCA +
Preference number: 6 (lower is better)
Translates to: CRIAVAASPGGP*NSVFWPRSLIS
Trigger: TGAAATCAGAGACCTTGGCCAAAAGACGGAGTTCCAAGGACCTCCTGGGGAAGCCGCCACAGCTATACGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 72 bp TCTAAAATGATGACCGTCTCTTGCTGCTTAATAATCTaGCCCTTGTCCAGCTCGGGCCCCAGGGAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: SKMMTVSCCLII*PLSSSGPREEG
Trigger: CCCTTCCTCCCTGGGGCCCGAGCTGGACAAGGGCAAGATTATTAAGCAGCAAGAGACGGTCATCATTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 72 bp GTAACCGTCGTTCTCTCCGACTCTCTCTGCATCCCTTaGACCCTTTGTCCGTTTGGCATCATAAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: VTVVLSDSLCIP*TLCPFGIIRVS
Trigger: GCTGACCCTTATGATGCCAAACGGACAAAGGGTCAAAGGGATGCAGAGAGAGTCGGAGAGAACGACGGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 90 bp TGGTTCCATGTAACCGTCGTTCTCTCCGACTCTCTCTGCATCCCTTaGACCCTTTGTCCGTTTGGCATCATAAGGGTCAGCATAGTCTTC +
Preference number: 6 (lower is better)
Translates to: WFHVTVVLSDSLCIP*TLCPFGIIRVSIVF
Trigger: GAAGACTATGCTGACCCTTATGATGCCAAACGGACAAAGGGTCAAAGGGATGCAGAGAGAGTCGGAGAGAACGACGGTTACATGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS GCA 72 bp TGGTTCCATGTAACCGTCGTTCTCTCCGACTCTCTCTaGATCCCTTTGACCCTTTGTCCGTTTGGCATCATA +
Preference number: 6 (lower is better)
Translates to: WFHVTVVLSDSL*IPLTLCPFGII
Trigger: TATGATGCCAAACGGACAAAGGGTCAAAGGGATGCAGAGAGAGTCGGAGAGAACGACGGTTACATGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 72 bp CGTTCTCTCCGACTCTCTCTGCATCCCTTTGACCCTTaGTCCGTTTGGCATCATAAGGGTCAGCATAGTCTT +
Preference number: 6 (lower is better)
Translates to: RSLRLSLHPFDP*SVWHHKGQHSL
Trigger: AAGACTATGCTGACCCTTATGATGCCAAACGGACAAAGGGTCAAAGGGATGCAGAGAGAGTCGGAGAGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS CAA 72 bp CTGTCAAGCAGCTGGAGAGCCTTCACCAGGGGATCTTaGGAACCCCGTCGTCTAATTTCTGTTATCATTTGC +
Preference number: 6 (lower is better)
Translates to: LSSSWRAFTRGS*EPRRLISVIIC
Trigger: GCAAATGATAACAGAAATTAGACGACGGGGTTCCAAAGATCCCCTGGTGAAGGCTCTCCAGCTGCTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304760.3
CDS TCA 72 bp AGAAGACTGTCACACAGTGTTCCTTCCCCTTGGAGATaGGGAAAGCCATGGGGCTTACTTACTTTAGGGCAA +
Preference number: 6 (lower is better)
Translates to: RRLSHSVPSPWR*GKPWGLLTLGQ
Trigger: TTGCCCTAAAGTAAGTAAGCCCCATGGCTTTCCTCATCTCCAAGGGGAAGGAACACTGTGTGACAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555188.5
CDS GCA 72 bp CCATGGGGCTTACTTACTTTAGGGCAATGGAGTACCTaGTGTTCCCTGACTCACTATTTCGAACCAGGTAAC +
Preference number: 6 (lower is better)
Translates to: PWGLLTLGQWST*CSLTHYFEPGN
Trigger: GTTACCTGGTTCGAAATAGTGAGTCAGGGAACAGCAGGTACTCCATTGCCCTAAAGTAAGTAAGCCCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555188.5