Pregenerated sensors for SHCBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171241Ensembl transcript IDs: ENST00000303383.8, ENST00000564272.1, ENST00000566016.5, ENST00000567698.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCTGCGATTACAAGCGTaGGCCACCGCCTGGCCCGAA | + |
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Preference number: 2 (lower is better) Translates to: SSQISNPYPSRALPKFPMLRLQA*ATAWPE Trigger: TTCGGGCCAGGCGGTGGCTCACGCTTGTAATCGCAG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCAAGCTGGAATGCAGTaGCGCAATCACACCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: SSQISNPYPSRALPKFPMQAGMQ*RNHTSL Trigger: CAGTGAGGTGTGATTGCGCCACTGCATTCCAGCTTG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGCTACACTGACACTATaGCCCACAGTGAGTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SSQISNPYPSRALPKFPMATLTL*PTVSLK Trigger: TTTCAAACTCACTGTGGGCCATAGTGTCAGTGTAGC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCAGACTCACTGTAATTaGGATGAAAAGGCAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: SSQISNPYPSRALPKFPMQTHCN*DEKATL Trigger: TAGAGTTGCCTTTTCATCCCAATTACAGTGAGTCTG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGATGTTTAACTCTCCATaGTTGAGGCAAAATGTACTG | + |
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Preference number: 2 (lower is better) Translates to: SSQISNPYPSRALPKFPMMFNSP*LRQNVL Trigger: CAGTACATTTTGCCTCAATCATGGAGAGTTAAACAT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTTGTCTATCGCTGTTTTaGCGACTGCATAGCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: QIPKYHVFLNDHICYTDTCLSLF*RLHSST Trigger: TGTTGAGCTATGCAGTCGTCAAAACAGCGATAGACA...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTACCAGGCTTAATATaGGAGAACCATGTGTATAAG | + |
|
Preference number: 2 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLPGLI*ENHVYK Trigger: CTTATACACATGGTTCTCTCATATTAAGCCTGGTAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTAGGGAGTGTTTTATGTaGAACACCTGCAAATGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QIPKYHVFLNDHICYTDTRECFM*NTCKWK Trigger: TTTCCATTTGCAGGTGTTGCACATAAAACACTCCCT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTTTACTTCCTCGTCTTTaGAGTGCTAAAGGTAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLLPRL*SAKGNY Trigger: GTAATTACCTTTAGCACTTCAAAGACGAGGAAGTAA...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR GCA 72 bp | ATACCAAAATACCATGTATTCTTAAATGACCACATATaGTACACTGACACTATGGCCCACAGTGAGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: IPKYHVFLNDHI*YTDTMAHSEFE Trigger: TTCAAACTCACTGTGGGCCATAGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| 3UTR-3UTR CAA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTTTTTATGCACTAGTCTaGCATTCCCTTCCTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: QIPKYHVFLNDHICYTDTFYALV*HSLPYF Trigger: GAAGTAAGGAAGGGAATGCAAGACTAGTGCATAAAA...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGAGAGACGCCAGCTCCTaGTCCACCGCCCAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMRDASS*STAQPM Trigger: CATGGGCTGGGCGGTGGAGCAGGAGCTGGCGTCTCT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCATGCGCTCCGGCGCCATaGCCGCTGCCTCCAGACCGC | + |
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Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLACAPAP*PLPPDR Trigger: GCGGTCTGGAGGCAGCGGCCATGGCGCCGGAGCGCA...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTCCTCACCAGGCTCCTaGCAAAGCCTGTCCGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMSSPGS*QSLSVS Trigger: GCTTACGGACAGGCTTTGCCAGGAGCCTGGTGAGGA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTGCAGGGGCAACCGATaGTCCTTCAGATCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMCRGNR*SFRSRS Trigger: GCTCCTTGATCTGAAGGAGCATCGGTTGCCCCTGCA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCCGGTCGTCTCACACTaGAGCACACAGTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMPVVSH*STQFSS Trigger: GCTGGAAAACTGTGTGCTGCAGTGTGAGACGACCGG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGGAGACCAGCCATCATaGTGGAGGAGACCACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMGDQPS*WRRPHE Trigger: CTCATGTGGTCTCCTCCACCATGATGGCTGGTCTCC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTGCGATTACAAGCGTaGGCCACCGCCTGGCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLRLQA*ATAWPE Trigger: TTCGGGCCAGGCGGTGGCTCACGCTTGTAATCGCAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGGCAGGAGAATTGCTTaGATTCAGGAGGTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMGRRIA*IQEVEV Trigger: AACCTCCACCTCCTGAATTCAAGCAATTCTCCTGCC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCTGGTCAAACACTCCTaGATCATCAAACACCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMLVKHS*IIKHHP Trigger: TGGGTGGTGTTTGATGATTCAGGAGTGTTTGACCAG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCTGAGGCAGGAGAATTaGTTGAATTCAGGAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMLRQEN*LNSGGG Trigger: TCCACCTCCTGAATTCAAGCAATTCTCCTGCCTCAG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCTATACCAGCACCCTTaGCGCCATATAAATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMLYQHP*RHINPS Trigger: ACTCGGATTTATATGGCGCCAAGGGTGCTGGTATAG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGTCAACAATAAGTCCTaGTGGAACTCGGTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMVNNKS*WNSVFK Trigger: CTTGAAGACCGAGTTCCATCAGGACTTATTGTTGAC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTGATGTCCGCACTGTaGCTCCGGTCGTCTCACACT | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLMSAL*LRSSHT Trigger: AGTGTGAGACGACCGGAGTCACAGTGCGGACATCAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTGTCTATCGCTGTTTTaGCGACTGCATAGCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMCLSLF*RLHSST Trigger: TGTTGAGCTATGCAGTCGTCAAAACAGCGATAGACA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGATTGCAAGGGCTGTCTaGTCAAACACTCCTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMIARAV*SNTPES Trigger: TGATTCAGGAGTGTTTGACCAGACAGCCCTTGCAAT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTCTGGCCTTTCTGTGTaGAGGCAGCAATTAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMSGLSV*RQQLVH Trigger: ATGAACTAATTGCTGCCTCCACACAGAAAGGCCAGA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAGCAGCCTCAACCTCCTaGGCTCAAGGATCCTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAAASTS*AQGSSS Trigger: GCTAGAGGATCCTTGAGCCCAGGAGGTTGAGGCTGC...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTAGCCTCAGCCTCCTaGGTAGCTGGAACTACATGC | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLASAS*VAGTTC Trigger: GCATGTAGTTCCAGCTACTCAGGAGGCTGAGGCTAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCTCCATTTTACCAGTTaGACACTCAATCAGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMLHFTS*TLNQLF Trigger: GAAGAGCTGATTGAGTGTGCAACTGGTAAAATGGAG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGAGAAGGGTCAGTTCTTaGACAAAGCTCCATTTTACC | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMRRVSS*TKLHFT Trigger: GGTAAAATGGAGCTTTGTGCAAGAACTGACCCTTCT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTAGGAGACCACATGAGTaGTCTTCTGACCGCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTRRPHE*SSDRWN Trigger: GTTCCAGCGGTCAGAAGATCACTCATGTGGTCTCCT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGGATCACTATGGAACTaGATTTCTCTTTCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMGSLWN*ISLSSS Trigger: TGAGGAAGAAAGAGAAATTCAGTTCCATAGTGATCC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGGCTCTCCACTTGTCTaGATTTTAAGCGCTTTATTT | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMGSPLV*ILSALF Trigger: AAATAAAGCGCTTAAAATTCAGACAAGTGGAGAGCC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGGTAGCTACAATCACTaGATGAATCTTCATCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMGSYNH*MNLHLG Trigger: TCCAAGATGAAGATTCATGCAGTGATTGTAGCTACC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCACATTGTCACTCAGGGTaGACTGACTCCCAGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAHCHSG*TDSQGR Trigger: TCTACCCTGGGAGTCAGTGCACCCTGAGTGACAATG...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCGCTGTTTTGACGACTaGATAGCTCAACAGAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMRCFDD*IAQQKN Trigger: ATTTTTCTGTTGAGCTATGCAGTCGTCAAAACAGCG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTTAAATGACCACATATaGTACACTGACACTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMLNDHI*YTDTMA Trigger: GGCCATAGTGTCAGTGTAGCATATGTGGTCATTTAA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR CCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCAAGCTGGAATGCAGTaGCGCAATCACACCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTQAGMQ*RNHTSL Trigger: CAGTGAGGTGTGATTGCGCCACTGCATTCCAGCTTG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTATCCCTTCCTTGCAGTaGTGGATCCCATTGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTIPSLQ*WIPLSL Trigger: GAGTGACAATGGGATCCATCACTGCAAGGAAGGGAT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTTTCCCATTCCACTTaGACTGGTTCCCCACAATCC | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLSHST*TGSPQS Trigger: GGATTGTGGGGAACCAGTTCAAGTGGAATGGGAAAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTTTGAGGTCAGGAGTTTaGGAACAGCCTGGGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLRSGV*EQPGQH Trigger: ATGTTGCCCAGGCTGTTCTCAAACTCCTGACCTCAA...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR TCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTTAACTCTCCATGATTaGGGCAAAATGTACTGCATA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMLTLHD*GKMYCI Trigger: TATGCAGTACATTTTGCCTCAATCATGGAGAGTTAA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTTTGAACACATTAGTGTaGCAGACTGCCCGCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLNTLV*QTARHP Trigger: TGGATGGCGGGCAGTCTGGCACACTAATGTGTTCAA...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGATGGAGATATTTTCCTaGTCGGAATCAGAGTTACAA | + |
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Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMMEIFS*SESELQ Trigger: TTGTAACTCTGATTCCGAGCAGGAAAATATCTCCAT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
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| CDS-3UTR GCA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGTCTTCAGCATTTTCTTaGAGGTCAGAGAAGATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSQISNPYPSRALPKFPMSSAFS*RSEKIV Trigger: TACAATCTTCTCTGACCTGCAAGAAAATGCTGAAGA...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAGTAGCTGGAACTACATaGATGCACCACCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAVAGTT*MHHHTQ Trigger: CTGAGTGTGGTGGTGCATGCATGTAGTTCCAGCTAC...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAATTAGCCAGGCATGGTaGCTGTCATACCAGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAISQAW*LSYQLL Trigger: AAGTAGCTGGTATGACAGCCACCATGCCTGGCTAAT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCATCTGACATGCTCAATTaGAAGGGCTGTCTGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLASDMLN*KGCLVK Trigger: TTTGACCAGACAGCCCTTGCAATTGAGCATGTCAGA...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR GCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCAGCAATGGAGAAAGTaGCATGTACCACATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTQQWRK*HVPHNG Trigger: GCCATTATGTGGTACATGGCACTTTCTCCATTGCTG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAGCTACACTGACACTATaGCCCACAGTGAGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAATLTL*PTVSLK Trigger: TTTCAAACTCACTGTGGGCCATAGTGTCAGTGTAGC...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAAAAATTAGCCAGGCATaGTGGCTGTCATACCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAKISQA*WLSYQL Trigger: TAGCTGGTATGACAGCCACCATGCCTGGCTAATTTT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTAAAATCAATGTGATTTaGGAGGCTGAGGTGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTKINVI*EAEVGG Trigger: TCCACCCACCTCAGCCTCCCAAATCACATTGATTTT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAATTGAAAAATCAATGTaGTTTGGGAGGCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAIEKSM*FGRLRW Trigger: CCACCTCAGCCTCCCAAATCACATTGATTTTTCAAT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAACGACACGGTTCTTATaGGCTCATCAGTGTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLATTRFL*AHQCSI Trigger: AATAGAACACTGATGAGCTCATAAGAACCGTGTCGT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR GCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTGTACCTCAGAGGCCTTaGAGTCAGCTAAAATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTVPQRP*SQLKCN Trigger: ATTACATTTTAGCTGACTGCAAGGCCTCTGAGGTAC...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAAGCTCAACAGAAAAATaGGTCCCATTGACGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLASSTEK*VPLTSQ Trigger: TTGAGACGTCAATGGGACGCATTTTTCTGTTGAGCT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTATCCTTCCAACTCAATaGAGTCAGCAATGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTILPTQ*SQQWRK Trigger: CTTTCTCCATTGCTGACTCCATTGAGTTGGAAGGAT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCACAGACTCACTGTAATTaGGATGAAAAGGCAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAQTHCN*DEKATL Trigger: TAGAGTTGCCTTTTCATCCCAATTACAGTGAGTCTG...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCATTCCATAGAAGCCTGTaGAATGTACTTCCTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAFHRSL*NVLPRK Trigger: CTTTCTAGGAAGTACATTCCACAGGCTTCTATGGAA...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTAATCTTGATAGGCTCTaGATCGCTCATAGAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTNLDRL*IAHRTK Trigger: TTTTGTTCTATGAGCGATTCAGAGCCTATCAAGATT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAAAGTGTATATACACTTaGGATCAAATGATCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAKCIYT*DQMISG Trigger: CCCAGAGATCATTTGATCTCAAGTGTATATACACTT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR TCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTGTAACTCCAGAAAAGTaGAGTGTATATACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTVTPEK*SVYTLE Trigger: CTCAAGTGTATATACACTTCACTTTTCTGGAGTTAC...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCATCATCAGTGTTCTATTaGACTTTCTTCAATCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKNAVHMTPIAFLCTSLASSVFY*TFFNLP Trigger: AGGGAGATTGAAGAAAGTTCAATAGAACACTGATGA...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CCA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCATGAATCTTCATCTTaGAACAAACCTTTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIPKYHVFLNDHICYTDTHESSS*NKPFSR Trigger: TCTGGAGAAAGGTTTGTTCCAAGATGAAGATTCATG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS GCA 90 bp | CTCCTGCTCCACCGCCCAGCCCATGCGCTCCGGCGCCATGGCCGCTaGCTCCAGACCGCCGCCCGTCAGCGACCCGTCAGCCATTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLHRPAHALRRHGR*LQTAARQRPVSHFK Trigger: TTTGAAATGGCTGACGGGTCGCTGACGGGCGGCGGTCTGGAGGCAGCGGCCATGGCGCCGGAGCGCATGGGCTGGGCGGTGGAGCAGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303383.8 ENST00000566016.5 |
||
| CDS GCA 90 bp | GAATCTTCATCTTGGAACAAACCTTTCTCCAGAGACGCCAGCTCCTaGTCCACCGCCCAGCCCATGCGCTCCGGCGCCATGGCCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESSSWNKPFSRDASS*STAQPMRSGAMAAA Trigger: GGCAGCGGCCATGGCGCCGGAGCGCATGGGCTGGGCGGTGGAGCAGGAGCTGGCGTCTCTGGAGAAAGGTTTGTTCCAAGATGAAGATTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303383.8 ENST00000566016.5 |
||
| CDS CCA 90 bp | CCGGTTCTATTTCTGGACTCCGGCCCAAGTTGGCGCTCCTCACTTTaGACACGTCACTACCCTCCGTGCACAGGACAGCCATCTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVLFLDSGPSWRSSL*TRHYPPCTGQPSKP Trigger: TGGCTTAGATGGCTGTCCTGTGCACGGAGGGTAGTGACGTGTCCAAAGTGAGGAGCGCCAACTTGGGCCGGAGTCCAGAAATAGAACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564272.1 |
||
| CDS GCA 90 bp | GGCCCAAGTTGGCGCTCCTCACTTTGGACACGTCACTACCCTCCGTaGACAGGACAGCCATCTAAGCCAAGGGTTCAAGCTTTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPSWRSSLWTRHYPP*TGQPSKPRVQAFLF Trigger: GAAGAGAAAAGCTTGAACCCTTGGCTTAGATGGCTGTCCTGTGCACGGAGGGTAGTGACGTGTCCAAAGTGAGGAGCGCCAACTTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564272.1 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCCTTTCCCATTCCACTaGAACTGGTTCCCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: SSQISNPYPSRALPKFPMPFPFH*NWFPTI Trigger: GATTGTGGGGAACCAGTTCAAGTGGAATGGGAAAGG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGACTGAGGCAGGAGAATaGCTTGAATTCAGGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQISNPYPSRALPKFPMTEAGE*LEFRRW Trigger: CCACCTCCTGAATTCAAGCAATTCTCCTGCCTCAGT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCAGAAGGGTCAGTTCTaGCACAAAGCTCCATTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSQISNPYPSRALPKFPMQKGQF*HKAPFY Trigger: GTAAAATGGAGCTTTGTGCAAGAACTGACCCTTCTG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTTGAGGTCAGGAGTTaGAGAACAGCCTGGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLEVRS*RTAWAT Trigger: TGTTGCCCAGGCTGTTCTCAAACTCCTGACCTCAAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGAATGAGTTTCAGCTTTaGTTTCAACTGTTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSQISNPYPSRALPKFPMNEFQL*FQLFHL Trigger: GAGATGGAACAGTTGAAACAAAAGCTGAAACTCATT...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCATCTATACCAGCACCCTaGGCGCCATATAAATCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKNAVHMTPIAFLCTSLASIPAP*APYKSE Trigger: CTCGGATTTATATGGCGCCAAGGGTGCTGGTATAGA...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAAGGCAGGAGAATTGCTaGAATTCAGGAGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KKNAVHMTPIAFLCTSLARQENC*NSGGGG Trigger: ACCTCCACCTCCTGAATTCAAGCAATTCTCCTGCCT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGCCTATGCTATACCATTaGAGATGTTTAACTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSQISNPYPSRALPKFPMPMLYH*RCLTLH Trigger: ATGGAGAGTTAAACATCTCAAATGGTATAGCATAGG...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAATATCAAACCCATACCCCTCTAGGGCACTCCCTAAATTCCCTATGGAAGTGTATATACACTaGAGATCAAATGATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQISNPYPSRALPKFPMEVYIH*RSNDLW Trigger: CCAGAGATCATTTGATCTCAAGTGTATATACACTTC...CATAGGGAATTTAGGGAGTGCCCTAGAGGGGTATGGGTTTGATATTTGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCAATCTCAACCAGCACCTaGAACACATTAGTGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAISTST*NTLVCQ Trigger: CTGGCACACTAATGTGTTCAAGGTGCTGGTTGAGAT...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTGCTCCATTTTACCAGTaGCACACTCAATCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QIPKYHVFLNDHICYTDTAPFYQ*HTQSAL Trigger: AAGAGCTGATTGAGTGTGCAACTGGTAAAATGGAGC...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTATCTTCAGCATTTTCTaGCAGGTCAGAGAAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: QIPKYHVFLNDHICYTDTIFSIF*QVREDC Trigger: ACAATCTTCTCTGACCTGCAAGAAAATGCTGAAGAT...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | CAGATACCAAAATACCATGTATTCTTAAATGACCACATATGCTACACTGACACTCTCATCAGTGTTCTATaGAACTTTCTTCAATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QIPKYHVFLNDHICYTDTLISVL*NFLQSP Trigger: GGGAGATTGAAGAAAGTTCAATAGAACACTGATGAG...AGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAATGCTGTACATATGACACCTATTGCATTTTTATGCACTAGTCTTGCATGGCCCACAGTGAGTTaGAAAAGATATAACAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: KKNAVHMTPIAFLCTSLAWPTVS*KRYNKI Trigger: AATCTTGTTATATCTTTTCAAACTCACTGTGGGCCA...TGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS CCA 72 bp | CCTGCTCCACCGCCCAGCCCATGCGCTCCGGCGCCATaGCCGCTGCCTCCAGACCGCCGCCCGTCAGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: PAPPPSPCAPAP*PLPPDRRPSAT Trigger: GGTCGCTGACGGGCGGCGGTCTGGAGGCAGCGGCCATGGCGCCGGAGCGCATGGGCTGGGCGGTGGAGCAGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303383.8 ENST00000564272.1 ENST00000566016.5 |
||
| CDS GCA 72 bp | TCTTGGAACAAACCTTTCTCCAGAGACGCCAGCTCCTaGTCCACCGCCCAGCCCATGCGCTCCGGCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SWNKPFSRDASS*STAQPMRSGAM Trigger: CATGGCGCCGGAGCGCATGGGCTGGGCGGTGGAGCAGGAGCTGGCGTCTCTGGAGAAAGGTTTGTTCCAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303383.8 ENST00000566016.5 |
||
| CDS GCA 72 bp | GCTGATGTCCGCACTGTGACTCCGGTCGTCTCACACTaGAGCACACAGTTTTCCAGCGTAGTCTTACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: ADVRTVTPVVSH*STQFSSVVLPR Trigger: CCGTGGTAAGACTACGCTGGAAAACTGTGTGCTGCAGTGTGAGACGACCGGAGTCACAGTGCGGACATCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS GCA 72 bp | TGGCGCTCCTCACTTTGGACACGTCACTACCCTCCGTaGACAGGACAGCCATCTAAGCCAAGGGTTCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WRSSLWTRHYPP*TGQPSKPRVQA Trigger: AGCTTGAACCCTTGGCTTAGATGGCTGTCCTGTGCACGGAGGGTAGTGACGTGTCCAAAGTGAGGAGCGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564272.1 |
||
| CDS GCA 72 bp | CTTCCTTGCAGTGATGGATCCCATTGTCACTCAGGGTaGACTGACTCCCAGGGTAGATTTCTATACCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPCSDGSHCHSG*TDSQGRFLYQH Trigger: GTGCTGGTATAGAAATCTACCCTGGGAGTCAGTGCACCCTGAGTGACAATGGGATCCATCACTGCAAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303383.8 ENST00000567698.1 |
||
| CDS TCA 72 bp | AGTTCTTCATTAGAAACTCTGCTGATGTCCGCACTGTaGCTCCGGTCGTCTCACACTGCAGCACACAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLETLLMSAL*LRSSHTAAHSF Trigger: AAAACTGTGTGCTGCAGTGTGAGACGACCGGAGTCACAGTGCGGACATCAGCAGAGTTTCTAATGAAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303383.8 |
||
| CDS CAA 72 bp | AAGGGTCAGTTCTTGCACAAAGCTCCATTTTACCAGTaGCACACTCAATCAGCTCTTCTAGATCCACTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KGQFLHKAPFYQ*HTQSALLDPLF Trigger: AAAGAGTGGATCTAGAAGAGCTGATTGAGTGTGCAACTGGTAAAATGGAGCTTTGTGCAAGAACTGACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303383.8 ENST00000567698.1 |
||
| CDS CAA 72 bp | ACTTTTGCCAGTTGGATAGGTGGGTTAATAGTGGAATaGTCACACTTATGTTTTCTCACTTTGTTGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: TFASWIGGLIVE*SHLCFLTLLGL Trigger: GAGTCCCAACAAAGTGAGAAAACATAAGTGTGACAATTCCACTATTAACCCACCTATCCAACTGGCAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564272.1 |
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| CDS CCA 72 bp | AAACTGAAGCCAAGTGACTTTTGCCAGTTGGATAGGTaGGTTAATAGTGGAATTGTCACACTTATGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KLKPSDFCQLDR*VNSGIVTLMFS Trigger: AGAAAACATAAGTGTGACAATTCCACTATTAACCCACCTATCCAACTGGCAAAAGTCACTTGGCTTCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564272.1 |
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| CDS CAA 72 bp | ATAGTGGAATTGTCACACTTATGTTTTCTCACTTTGTaGGGACTCTCTGCTACACAATACAACCGAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: IVELSHLCFLTL*GLSATQYNRKC Trigger: ACACTTTCGGTTGTATTGTGTAGCAGAGAGTCCCAACAAAGTGAGAAAACATAAGTGTGACAATTCCACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564272.1 |
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| CDS CAA 72 bp | TTAATAGTGGAATTGTCACACTTATGTTTTCTCACTTaGTTGGGACTCTCTGCTACACAATACAACCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LIVELSHLCFLT*LGLSATQYNRK Trigger: CTTTCGGTTGTATTGTGTAGCAGAGAGTCCCAACAAAGTGAGAAAACATAAGTGTGACAATTCCACTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564272.1 |
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