RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000185634

Ensembl transcript IDs: ENST00000332408.9, ENST00000396535.7, ENST00000537958.5, ENST00000557797.5, ENST00000558220.1, ENST00000559289.1

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGGGCTaGCCTTTGATTTCCAGCAGAGCCAGGTGTACTTTGAAGAGCCTG +
Preference number: 1 (lower is better)
Translates to: FWCLSAVPWAPQWLG*PLISSRARCTLKSL
Trigger: CAGGCTCTTCAAAGTACACCTGGCTCTGCTGGAAATCAAAGGTCAGCCCAACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
3UTR TCA 90 bp TCAGCTTGTCACATGCTGTATTTAGACAGTCTGAATAGCAAACACTaGGAAATGCTAGGCCAGAGGATTTGGGCCCCAATCCTTTTAACC +
Preference number: 1 (lower is better)
Translates to: SACHMLYLDSLNSKH*EMLGQRIWAPILLT
Trigger: GGTTAAAAGGATTGGGGCCCAAATCCTCTGGCCTAGCATTTCTCAGTGTTTGCTATTCAGACTGTCTAAATACAGCATGTGACAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR GCA 90 bp TTGCATCTATTTGTATCAGGAACTCTTGCTACCAAGTTAATACTCTaGTCAGCTAGAGTGAGACCACAGCCCTGCTCTGTCTCTGATAAA +
Preference number: 1 (lower is better)
Translates to: LHLFVSGTLATKLIL*SARVRPQPCSVSDK
Trigger: TTTATCAGAGACAGAGCAGGGCTGTGGTCTCACTCTAGCTGAGCAGAGTATTAACTTGGTAGCAAGAGTTCCTGATACAAATAGATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR CCA 90 bp CCAAATTCACCTAGCCCATTTAGCTCATTTTATTGCCAAGGAAACTaGAACCCAAACAGATTCAGCAACTTGCTGAAGGTCACACTGGTA +
Preference number: 1 (lower is better)
Translates to: PNSPSPFSSFYCQGN*NPNRFSNLLKVTLV
Trigger: TACCAGTGTGACCTTCAGCAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAATGGGCTAGGTGAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR GCA 90 bp AAGGTCACACTGGTAAGACTCAGCGTAATGCTTTTCTGTACACCATaGTTAATCACTCTGTTAGTTTACCAGTTGGTCTACATGTGGAAA +
Preference number: 1 (lower is better)
Translates to: KVTLVRLSVMLFCTP*LITLLVYQLVYMWK
Trigger: TTTCCACATGTAGACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACGCTGAGTCTTACCAGTGTGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR TCA 90 bp CAAATGGGACAGTCCAATGAAACAGACAGCCATGTTAGTGGCTTTTaGTTTGATTCCACTGACATACACACAGTTCGAATTCAATGTCAT +
Preference number: 1 (lower is better)
Translates to: QMGQSNETDSHVSGF*FDSTDIHTVRIQCH
Trigger: ATGACATTGAATTCGAACTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCATTGGACTGTCCCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR TCA 90 bp CAGTATTTTAGACTGAATGGTTTGGAGTCTAAACTATGTGAATGTTaGTCTCAGGTGTGCCATTCATTCTGTGAGTATGGACACAGACTA +
Preference number: 1 (lower is better)
Translates to: QYFRLNGLESKLCEC*SQVCHSFCEYGHRL
Trigger: TAGTCTGTGTCCATACTCACAGAATGAATGGCACACCTGAGATCAACATTCACATAGTTTAGACTCCAAACCATTCAGTCTAAAATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR-3UTR GCA 90 bp GGCTCTCTGCCGCCTTCCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGGTGCCTTTCCGCAGTaGCATGGGCTCCCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: GSLPPSCSACHDSILRSTGAFPQ*HGLPSG
Trigger: ACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACC...TGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
3UTR-3UTR TCA 90 bp CTGCCGCCTTCCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGCTGTGGCACCCGGCTaGACAGTTTCTGGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: LPPSCSACHDSILRSTAAAVAPG*TVSGAF
Trigger: AAAGGCACCAGAAACTGTTCAGCCGGGTGCCACAGC...AGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
3UTR-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATATGGCCTTAAAAAGTaGCATCCGTGCATACATATA +
Preference number: 2 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEYGLKK*HPCIHI
Trigger: TATATGTATGCACGGATGTCACTTTTTAAGGCCATA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR GCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTATGGTCTTGGAAAGATaGACTTCACAGTTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVMVLER*TSQFVL
Trigger: GAGCACAAACTGTGAAGTGCATCTTTCCAAGACCAT...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCAAAATGGGGTTTCTTaGAATATCAGTGTGATGGTG +
Preference number: 2 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVQNGVS*NISVMV
Trigger: CACCATCACACTGATATTTCAAGAAACCCCATTTTG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR GCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTGCACTTCACAGTTTGTaGTCTATTTTATCTACAAAC +
Preference number: 2 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVALHSL*SILSTN
Trigger: GTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGC...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR CAA 90 bp TGGGACAGTCCAATGAAACAGACAGCCATGTTAGTGGCTTTTGATTaGATTCCACTGACATACACACAGTTCGAATTCAATGTCATATTT +
Preference number: 2 (lower is better)
Translates to: WDSPMKQTAMLVAFD*IPLTYTQFEFNVIF
Trigger: AAATATGACATTGAATTCGAACTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCATTGGACTGTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCAAAATGGGGTTTCTTaGAATATCAGTGTGATGGTG +
Preference number: 2 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKQNGVS*NISVMV
Trigger: CACCATCACACTGATATTTCAAGAAACCCCATTTTG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
3UTR CAA 90 bp ATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTaGGTCTACATGTGGAAAATCTTTCCAAGTGCTTCATTCAATATG +
Preference number: 2 (lower is better)
Translates to: MLFCTPCLITLLVYQ*VYMWKIFPSASFNM
Trigger: CATATTGAATGAAGCACTTGGAAAGATTTTCCACATGTAGACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR GCA 72 bp CCCCATCCTTTACCAAGAGGCTCTCTGCCGCCTTCCTaGTCAGCTTGCCATGATAGCATTCTTCGCTCCACA +
Preference number: 3 (lower is better)
Translates to: PHPLPRGSLPPS*SACHDSILRST
Trigger: TGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGAGCCTCTTGGTAAAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
3UTR-3UTR CAA 90 bp TCTTCGCTCCACAGCTGCTGCTTAATGTGTGGCAAAGAATGTGAGCTGGCAGGCAGAGCCAGGTGTACTTaGAAGAGCCTGTGTATTAAT +
Preference number: 3 (lower is better)
Translates to: SSLHSCCLMCGKECELAGRARCT*KSLCIN
Trigger: ATTAATACACAGGCTCTTCAAAGTACACCTGGCTCT...GCCTGCCAGCTCACATTCTTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
3UTR GCA 72 bp TTTGTATCAGGAACTCTTGCTACCAAGTTAATACTCTaGTCAGCTAGAGTGAGACCACAGCCCTGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: FVSGTLATKLIL*SARVRPQPCSV
Trigger: GACAGAGCAGGGCTGTGGTCTCACTCTAGCTGAGCAGAGTATTAACTTGGTAGCAAGAGTTCCTGATACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTGGTCCATGATGGTCTaGGAAAGATGCACTTCACAG +
Preference number: 3 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVWSMMV*ERCTSQ
Trigger: CTGTGAAGTGCATCTTTCCAAGACCATCATGGACCA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR TCA 72 bp CACATGCTGTATTTAGACAGTCTGAATAGCAAACACTaGGAAATGCTAGGCCAGAGGATTTGGGCCCCAATC +
Preference number: 3 (lower is better)
Translates to: HMLYLDSLNSKH*EMLGQRIWAPI
Trigger: GATTGGGGCCCAAATCCTCTGGCCTAGCATTTCTCAGTGTTTGCTATTCAGACTGTCTAAATACAGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR GCA 72 bp GTCCCCCAAATTATCAAGTTGAAAGGCACATACCACTaGCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGT +
Preference number: 3 (lower is better)
Translates to: VPQIIKLKGTYH*PSSSFKLSLAC
Trigger: ACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTGGGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR CAA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGTGGTCCATGATGGTCTaGGAAAGATGCACTTCACAG +
Preference number: 3 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQWSMMV*ERCTSQ
Trigger: CTGTGAAGTGCATCTTTCCAAGACCATCATGGACCA...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR CAA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAAGTTGTGCTTTTAGCTaGTTATCAATGCAATATGGC +
Preference number: 3 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNESCAFS*LSMQYG
Trigger: GCCATATTGCATTGATAACAAGCTAAAAGCACAACT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR GCA 72 bp CCTCCAAATTCACCTAGCCCATTTAGCTCATTTTATTaGCAAGGAAACTGGAACCCAAACAGATTCAGCAAC +
Preference number: 3 (lower is better)
Translates to: PPNSPSPFSSFY*QGNWNPNRFSN
Trigger: GTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAATGGGCTAGGTGAATTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR-3UTR CAA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCCCCAAATTATCAAGTaGAAAGGCACATACCACTGC +
Preference number: 3 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQPQIIK*KGTYHC
Trigger: GCAGTGGTATGTGCCTTTCAACTTGATAATTTGGGG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR GCA 72 bp CTGGTAAGACTCAGCGTAATGCTTTTCTGTACACCATaGTTAATCACTCTGTTAGTTTACCAGTTGGTCTAC +
Preference number: 3 (lower is better)
Translates to: LVRLSVMLFCTP*LITLLVYQLVY
Trigger: GTAGACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACGCTGAGTCTTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
3UTR TCA 72 bp CAGTCCAATGAAACAGACAGCCATGTTAGTGGCTTTTaGTTTGATTCCACTGACATACACACAGTTCGAATT +
Preference number: 3 (lower is better)
Translates to: QSNETDSHVSGF*FDSTDIHTVRI
Trigger: AATTCGAACTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCATTGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAAGTTGTGCTTTTAGCTaGTTATCAATGCAATATGGC +
Preference number: 3 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTSCAFS*LSMQYG
Trigger: GCCATATTGCATTGATAACAAGCTAAAAGCACAACT...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
3UTR TCA 72 bp ATCATATCTATACGAGGTGCTAAGGATATATGTAGGTaGGAAACTATGATTCAGTGTCAGCCAATCAAGAAG +
Preference number: 3 (lower is better)
Translates to: IISIRGAKDICR*ETMIQCQPIKK
Trigger: CTTCTTGATTGGCTGACACTGAATCATAGTTTCTCACCTACATATATCCTTAGCACCTCGTATAGATATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp CGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGTGGCAGGCTGGGCTGTaGCACCCGGCTGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: RLNSFWCLSAVPWAPQWLWQAGL*HPAEQF
Trigger: AAACTGTTCAGCCGGGTGCCACAGCCCAGCCTGCCA...CAACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp TGGCACCCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGCAAAGAATGTGAGCTaGCAGGCTGGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: WHPAEQFLVPFRSAMGSPAKNVS*QAGLWH
Trigger: GTGCCACAGCCCAGCCTGCCAGCTCACATTCTTTGC...TGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp CGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGGTGTGGCAAAGAATGTaGGCTGGCAGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLNSFWCLSAVPWAPQWLVWQRM*AGRLGC
Trigger: ACAGCCCAGCCTGCCAGCTCACATTCTTTGCCACAC...CAACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGCGGGGTGGGGAGGCTaGGGCGAGCCCTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEAGWGG*GEPLFP
Trigger: CGGGAACAAGGGCTCGCCGCAGCCTCCCCACCCCGC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp TGGCACCCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: WHPAEQFLVPFRSAMGSPNEVSR*DCTPLG
Trigger: TCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATT...TGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGGGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp CCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTCGGCTGAACAGTTTCTaGTGCCTTTCCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PAEQFLVPFRSAMGSPVVRLNSF*CLSAVP
Trigger: TGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG...AACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATCTTCAGTCGGCAGGTaGGGTGCCAGGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNESSVGR*GARAGW
Trigger: CCACCCCGCCCTGGCACCTCACCTGCCGACTGAAGA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTCCACCTACTGGTGGCTaGTTCCCTGGAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: PAEQFLVPFRSAMGSPVVPPTGG*FPGISL
Trigger: CAATGAAATTCCAGGGAAGCAGCCACCAGTAGGTGG...AACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp CTGCCGCCTTCCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGTATCTCGCTGGGACTaGACCCCTCTTGGATGGACA +
Preference number: 4 (lower is better)
Translates to: LPPSCSACHDSILRSTAAVSRWD*TPLGWT
Trigger: TGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATAC...AGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAACTGTACTTGGCCCTGTaGAGCATCCCGGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNELYLAL*SIPGCP
Trigger: CGGGCACCCCGGGATGCTGCACAGGGCCAAGTACAG...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTTCTTCGCTCCACAGCTaGTGCTTAATGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PAEQFLVPFRSAMGSPVVSSLHS*CLMCGK
Trigger: TTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA...AACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGGGGTGGGGCTCTCCTaGGACGGCAAGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIGVGLS*DGKVAS
Trigger: AGATGCCACCTTGCCGTCGCAGGAGAGCCCCACCCC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATGTCCCACCAGGTCCTaGTGCGGTGGAGGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNECPTRS*CGGGAV
Trigger: GACTGCACCTCCACCGCAGCAGGACCTGGTGGGACA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTTCCACTCGGCACGTGTaGTTCAATAATGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: PAEQFLVPFRSAMGSPVVSTRHV*FNNEVS
Trigger: AGATACCTCATTATTGAAGCACACGTGCCGAGTGGA...AACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGGGAAGAGGGGCCGCTaGAACCTGGGTCCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIGKRGR*NLGPGF
Trigger: AAAGCCGGGACCCAGGTTCCAGCGGCCCCTCTTCCC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp CGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGGTACTTATGACGTCTTaGGCCATTCCATTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RLNSFWCLSAVPWAPQWLVLMTS*AIPLWH
Trigger: ATGCCACAATGGAATGGCCCAAGACGTCATAAGTAC...CAACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp TGCCGCCTTCCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGTCTCTCTCCTCGGCATaGCTATCAATATGCACCTCC +
Preference number: 4 (lower is better)
Translates to: CRLPAQLAMIAFFAPQLLSLSSA*LSICTS
Trigger: GGAGGTGCATATTGATAGCCATGCCGAGGAGAGAGA...CAGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp CGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGTGCACCCCTCTTGGATaGACATTACCAAATAGCACA +
Preference number: 4 (lower is better)
Translates to: RLNSFWCLSAVPWAPQWLCTPLG*TLPNST
Trigger: TGTGCTATTTGGTAATGTCCATCCAAGAGGGGTGCA...CAACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAAGCCAGGAGTACTACTaGCGGGCGCTGCTCCGCATT +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNESQEYY*RALLRI
Trigger: AATGCGGAGCAGCGCCCGTCAGTAGTACTCCTGGCT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp CATTCTTCGCTCCACAGCTGCTGCTTAATGTGTGGCAAAGAATGTGAGCTGGCAGCTGTGGCACCCGGCTaGACAGTTTCTGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HSSLHSCCLMCGKECELAAVAPG*TVSGAF
Trigger: AAAGGCACCAGAAACTGTTCAGCCGGGTGCCACAGC...TGCCAGCTCACATTCTTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGGTGCCTTTCCGCAGTaGCATGGGCTCCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIGAFPQ*HGLPSG
Trigger: ACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp ATTTCCAGCAGAGCCAGGTGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGGTGCCTTTCCGCAGTaGCATGGGCTCCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ISSRARCTLKSLCINVAGGAFPQ*HGLPSG
Trigger: ACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACC...CCCTGCTACATTAATACACAGGCTCTTCAAAGTACACCTGGCTCTGCTGGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp GCCAGGTGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGCTTTCCGCAGTGCCATaGGCTCCCCAGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: ARCTLKSLCINVAGVIKELSAVP*APQWLG
Trigger: GCCCAACCACTGGGGAGCCCATGGCACTGCGGAAAG...CTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAAAGTACACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGCTGTGGCACCCGGCTaGACAGTTTCTGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEAVAPG*TVSGAF
Trigger: AAAGGCACCAGAAACTGTTCAGCCGGGTGCCACAGC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGTGTGGCAAAGAATGTaGGCTGGCAGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEVWQRM*AGRLGC
Trigger: ACAGCCCAGCCTGCCAGCTCACATTCTTTGCCACAC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGAGGTGCACAGTGGGGTaGGGCTCTCCTGCGACGGCA +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLRCTVG*GSPATA
Trigger: TGCCGTCGCAGGAGAGCCCCACCCCACTGTGCACCT...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGGGGGCCGCTGGAACCTaGGTCCCGGCTTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQGAAGT*VPAFLE
Trigger: CTCCAGGAAAGCCGGGACCCAGGTTCCAGCGGCCCC...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp TGCCGCCTTCCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGGGCTCGTTGATTAACTaGATCTTTAGCTACGTAGGC +
Preference number: 4 (lower is better)
Translates to: CRLPAQLAMIAFFAPQLLGSLIN*IFSYVG
Trigger: GCCTACGTAGCTAAAGATCCAGTTAATCAACGAGCC...CAGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp TCTTCGCTCCACAGCTGCTGCTTAATGTGTGGCAAAGAATGTGAGCTGGCAGGCAACACCACCTACTGGTaGCTGCTTCCCTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: SSLHSCCLMCGKECELAGNTTYW*LLPWNF
Trigger: GAAATTCCAGGGAAGCAGCCACCAGTAGGTGGTGTT...GCCTGCCAGCTCACATTCTTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp GTTGGGCTGACCTTTGATTTCCAGCAGAGCCAGGTGTACTTTGAAGAGCCTGTGGCCCTATGGTACTTATaGCGTCTTGGGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: VGLTFDFQQSQVYFEEPVALWYL*RLGPFH
Trigger: ATGGAATGGCCCAAGACGTCATAAGTACCATAGGGC...CACAGGCTCTTCAAAGTACACCTGGCTCTGCTGGAAATCAAAGGTCAGCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp GGCTCTCTGCCGCCTTCCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAATTTGTTCCGTGGCTTaGACTTTGATCCGCATATCT +
Preference number: 4 (lower is better)
Translates to: GSLPPSCSACHDSILRSTICSVA*TLIRIS
Trigger: AGATATGCGGATCAAAGTTCAAGCCACGGAACAAAT...TGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGTGTGGCAAAGAATGTaGGCTGGCAGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIVWQRM*AGRLGC
Trigger: ACAGCCCAGCCTGCCAGCTCACATTCTTTGCCACAC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACCCACCAGGTCCTGCTaGGGTGGAGGTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTPTRSC*GGGAVP
Trigger: CGGGACTGCACCTCCACCGCAGCAGGACCTGGTGGG...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGTATCTCGCTGGGACTaGACCCCTCTTGGATGGACA +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEVSRWD*TPLGWT
Trigger: TGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATAC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATCTCTGCCGCCTTCCTaGTCAGCTTGCCATGATAGC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNESLPPS*SACHDS
Trigger: GCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGCAAAGTGGCCGGGTTaGCCAGCTTCATGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIAKWPG*PASCLP
Trigger: TGGCAAGCATGAAGCTGGCCAACCCGGCCACTTTGC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGCTTTCCGCAGTGCCATaGGCTCCCCAGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLLSAVP*APQWLG
Trigger: GCCCAACCACTGGGGAGCCCATGGCACTGCGGAAAG...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp GTTGGGCTGACCTTTGATTTCCAGCAGAGCCAGGTGTACTTTGAAGAGCCTGTGCCGTGGCTTGAACTTTaGTCCGCATATCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: VGLTFDFQQSQVYFEEPVPWLEL*SAYLKH
Trigger: GTGTTTCAGATATGCGGATCAAAGTTCAAGCCACGG...CACAGGCTCTTCAAAGTACACCTGGCTCTGCTGGAAATCAAAGGTCAGCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCCCCAGTGGTTGGGCTaGCCTTTGATTTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIPQWLG*PLISSR
Trigger: TCTGCTGGAAATCAAAGGTCAGCCCAACCACTGGGG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGCTTAATGTGTGGCGGAGTTCAAAAGCCTaGCCTATGGTACTTATGACG +
Preference number: 4 (lower is better)
Translates to: AQLAMIAFFAPQLLLNVWRSSKA*PMVLMT
Trigger: CGTCATAAGTACCATAGGGCAGGCTTTTGAACTCCG...CCACACATTAAGCAGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGTATCTCGCTGGGACTaGACCCCTCTTGGATGGACA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIVSRWD*TPLGWT
Trigger: TGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATAC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GCCAGGTGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGTACCAAGAGGCTCTCTaGCGCCTTCCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ARCTLKSLCINVAGVIKEYQEAL*RLPAQL
Trigger: AAGCTGAGCAGGAAGGCGGCAGAGAGCCTCTTGGTA...CTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAAAGTACACCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCCTTGGTCCTCACCTTaGCTTCAGGATCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIPWSSP*LQDPPG
Trigger: TCCTGGTGGATCCTGAAGGCAAGGTGAGGACCAAGG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGAAGGGTGACAGCCCATaGGGGAAACGCCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQKGDSP*GKRLPC
Trigger: GCAGGGGAGGCGTTTCCCCCATGGGCTGTCACCCTT...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTCAGACTCAGCAAAGTaGCCGGGTTGGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEISDSAK*PGWPAS
Trigger: TGAAGCTGGCCAACCCGGCCACTTTGCTGAGTCTGA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTGCAAAGAATGTGAGCTaGCAGGCTGGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVAKNVS*QAGLWH
Trigger: GTGCCACAGCCCAGCCTGCCAGCTCACATTCTTTGC...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCTTCGTCCAAGGACGTaGTCGACTCGTTCCGAAAGC +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVLRPRT*STRSES
Trigger: GCTTTCGGAACGAGTCGATCACGTCCTTGGACGAAG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp CCTGCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGCTTAATGTGCCCTCCAGAGGCAAATaGAATAGACTGCATATGATG +
Preference number: 4 (lower is better)
Translates to: PAQLAMIAFFAPQLLLNVPSRGK*NRLHMM
Trigger: CATCATATGCAGTCTATTTCATTTGCCTCTGGAGGG...CACATTAAGCAGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp CCAGTGGTTGGGCTGACCTTTGATTTCCAGCAGAGCCAGGTGTACTTTGAAGAGGAGCCAGGTGTACTTTaGAGAGCCTGTGTATTAATG +
Preference number: 4 (lower is better)
Translates to: PVVGLTFDFQQSQVYFEEEPGVL*RACVLM
Trigger: CATTAATACACAGGCTCTTCAAAGTACACCTGGCTC...CTCTTCAAAGTACACCTGGCTCTGCTGGAAATCAAAGGTCAGCCCAACCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCCGAAAGCTGAGATGTaGAGGATGATACGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIPKAEM*RMIRSV
Trigger: CACGCTGCGTATCATCCTGCACATCTCAGCTTTCGG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTGGGAAACGCCTCCCCTaGTCTGATTTCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVGKRLP*SDFSLS
Trigger: GGAGAGACTGAAATCAGAGCAGGGGAGGCGTTTCCC...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCCACCTCTCCAACTCTaGTCTCGAGCTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQPPLQL*SRARPP
Trigger: AGGTGGGCGAGCTCGAGAGCAGAGTTGGAGAGGTGG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTAGAAAGTGCCTGTCCTaGCTGCTCCTAAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIRKCLS*LLLSVG
Trigger: GCCAACACTTAGGAGCAGGCAGGACAGGCACTTTCT...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAACCTTCCTGCTCAGCTTaGCATGATAGCATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEPSCSA*HDSILR
Trigger: GCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGG...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCAGGTCCTGCTGCGGTaGAGGTGCAGTCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKQVLLR*RCSPGP
Trigger: AGGTCCGGGACTGCACCTCCACCGCAGCAGGACCTG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATGCACCCCTCTTGGATaGACATTACCTATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNECTPLG*TLPIAL
Trigger: CAGGGCAATAGGTAATGTCCATCCAAGAGGGGTGCA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGGACTGCACCCCTCTTaGATGGACATTACCTATTGC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEGLHPS*MDITYC
Trigger: GCAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEINEVSR*DCTPLG
Trigger: TCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATT...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACTTTCCGCAGTGCCATaGGCTCCCCAGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTLSAVP*APQWLG
Trigger: GCCCAACCACTGGGGAGCCCATGGCACTGCGGAAAG...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCGGCTGAACAGTTTCTaGTGCCTTTCCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVRLNSF*CLSAVP
Trigger: TGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGTGGCAGGCTGGGCTGTaGCACCCGGCTGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQWQAGL*HPAEQF
Trigger: AAACTGTTCAGCCGGGTGCCACAGCCCAGCCTGCCA...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCCACTCAGCACATATTaGCCAGGGGATGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIPLSTY*PGDVAL
Trigger: GAGTGCAACATCCCCTGGCCAATATGTGCTGAGTGG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTGTTTCACTGACTTGTaGTGGGTCCGTGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEICFTDL*WVRVPQ
Trigger: CTGAGGAACACGGACCCATCACAAGTCAGTGAAACA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGACGCCTCCCCTGCTCTaGTTTCAGTCTCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLTPPLL*FQSLPG
Trigger: GCCAGGGAGAGACTGAAATCAGAGCAGGGGAGGCGT...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGCCCTATGGTACTTATaGCGTCTTGGGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIALWYL*RLGPFH
Trigger: ATGGAATGGCCCAAGACGTCATAAGTACCATAGGGC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp TGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGATCCACCCCCAGTGGTTGGGCTaGCCTTTGATTTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CTLKSLCINVAGVIKEIHPQWLG*PLISSR
Trigger: TCTGCTGGAAATCAAAGGTCAGCCCAACCACTGGGG...GTGGATCTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAAAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGATACAGCACGAGTCCTaGCAGGCTGTCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKIQHES*QAVLAA
Trigger: CGCGGCCAGGACAGCCTGGCAGGACTCGTGCTGTAT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGGTGCCTTTCCGCAGTaGCATGGGCTCCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKGAFPQ*HGLPSG
Trigger: ACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GCCAGGTGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGCCTTCCTGCTCAGCTTaGCATGATAGCATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ARCTLKSLCINVAGVIKEPSCSA*HDSILR
Trigger: GCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGG...CTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAAAGTACACCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR GCA 90 bp TGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGATCCACTCTCTGCCGCCTTCCTaGTCAGCTTGCCATGATAGC +
Preference number: 4 (lower is better)
Translates to: CTLKSLCINVAGVIKEIHSLPPS*SACHDS
Trigger: GCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGA...GTGGATCTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAAAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCTGCCAGGCTGTCCTaGCCGCGTTCTCGCATAGCC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPARLS*PRSRIA
Trigger: GGCTATGCGAGAACGCGGCCAGGACAGCCTGGCAGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGGAAAGCGGCTGTACTTaGCCCTGTGCAGCATCCCGG +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLESGCT*PCAASR
Trigger: CCGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTC...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTGCACCCCTCTTGGATaGACATTACCTATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEICTPLG*TLPIAL
Trigger: CAGGGCAATAGGTAATGTCCATCCAAGAGGGGTGCA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCTTTCCGCAGTGCCATaGGCTCCCCAGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLSAVP*APQWLG
Trigger: GCCCAACCACTGGGGAGCCCATGGCACTGCGGAAAG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATGGCAGGCTGGGCTGTaGCACCCGGCTGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTWQAGL*HPAEQF
Trigger: AAACTGTTCAGCCGGGTGCCACAGCCCAGCCTGCCA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTTTGCCTGGGTTCGTTaGTTCCAAAGGCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLFAWVR*FQRLPS
Trigger: AGAGGGCAGCCTTTGGAATCAACGAACCCAGGCAAA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTGCCCTATGGTACTTATaGCGTCTTGGGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVALWYL*RLGPFH
Trigger: ATGGAATGGCCCAAGACGTCATAAGTACCATAGGGC...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp TTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGATCCACTCGGCATTTGATCCGCATATCTaGAACACCACCTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LKSLCINVAGVIKEIHSAFDPHI*NTTYWW
Trigger: CCACCAGTAGGTGGTGTTTCAGATATGCGGATCAAA...TGCCGAGTGGATCTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR TCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCCGTGGCTTGAACTTTaGTCCGCATATCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIPWLEL*SAYLKH
Trigger: GTGTTTCAGATATGCGGATCAAAGTTCAAGCCACGG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAACCCAAATTATCAAGTTaGAAGGCACATACCACTGCC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEPKLSS*KAHTTA
Trigger: GGCAGTGGTATGTGCCTTTCAACTTGATAATTTGGG...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATTTCAGAAGCCCATTTaGAGCCGAAAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEFQKPI*SRKLRC
Trigger: ACATCTCAGCTTTCGGCTGCAAATGGGCTTCTGAAA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATGCAGCATCCCGGGGTaGCCGAAGAGTCCTACATAC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTCSIPG*PKSPTY
Trigger: GTATGTAGGACTCTTCGGGCACCCCGGGATGCTGCA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAACACAGGCGACTTATTaGTTCCCTTGTAACTTGGGT +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNETQATY*FPCNLG
Trigger: ACCCAAGTTACAAGGGAAGCAATAAGTCGCCTGTGT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTTTAATGGCTCCATTTaGCCCGGGGACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVFNGSI*PGDSFT
Trigger: TGTGAAGCTGTCCCCGGGGCAAATGGAGCCATTAAA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCGGAGTTCAAAAGCCTaGCCTATGGTACTTATGACG +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIRSSKA*PMVLMT
Trigger: CGTCATAAGTACCATAGGGCAGGCTTTTGAACTCCG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGGTGCCTTTCCGCAGTaGCATGGGCTCCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSGAFPQ*HGLPSG
Trigger: ACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGTGAGACCACAGCCCTaGTCTGTCTCTGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIVRPQP*SVSDKS
Trigger: ACTTTTATCAGAGACAGAGCAGGGCTGTGGTCTCAC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCCAGTGTTCTCGCCTTaGAATCCTTGTCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQPVFSP*NPCRES
Trigger: GCTCTCCCGACAAGGATTCCAAGGCGAGAACACTGG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGCGGACCTACTTAAACTaGTTTCTGGGGAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLRTYLN*FLGKRG
Trigger: GCCCCTCTTCCCCAGAAACCAGTTTAAGTAGGTCCG...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGGCTCGTTGATTAACTaGATCTTTAGCTACGTAGGC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEGSLIN*IFSYVG
Trigger: GCCTACGTAGCTAAAGATCCAGTTAATCAACGAGCC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGCTTAATGTGTGGACTTTTCACACTGTATaGGGCAGTAAGCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: AQLAMIAFFAPQLLLNVWTFHTV*GSKPFV
Trigger: AACAAATGGCTTACTGCCCCATACAGTGTGAAAAGT...CCACACATTAAGCAGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLNEVSR*DCTPLG
Trigger: TCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATT...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGCAAAGAATGTGAGCTaGCAGGCTGGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTAKNVS*QAGLWH
Trigger: GTGCCACAGCCCAGCCTGCCAGCTCACATTCTTTGC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCTAGGCCAGAGGATTTaGGCCCCAATCCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVLGQRI*APILLT
Trigger: GGTTAAAAGGATTGGGGCCCAAATCCTCTGGCCTAG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTGAGAAAGATTTAGGCTaGGAGGCTAGGCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVEKDLG*EARPVS
Trigger: AGAGACTGGCCTAGCCTCCCAGCCTAAATCTTTCTC...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS-3UTR TCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTCCCCAGTGGTTGGGCTaGCCTTTGATTTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGPQWLG*PLISSR
Trigger: TCTGCTGGAAATCAAAGGTCAGCCCAACCACTGGGG...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGCTGTGGCACCCGGCTaGACAGTTTCTGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKAVAPG*TVSGAF
Trigger: AAAGGCACCAGAAACTGTTCAGCCGGGTGCCACAGC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGTGTGGCAAAGAATGTaGGCTGGCAGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKVWQRM*AGRLGC
Trigger: ACAGCCCAGCCTGCCAGCTCACATTCTTTGCCACAC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGTAGGTGAGAAACTATaGTTCAGTGTCAGCCAATCA +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEVGEKL*FSVSQS
Trigger: TGATTGGCTGACACTGAATCATAGTTTCTCACCTAC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGTGCCATTCATTCTGTaGGTATGGACACAGACTATA +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEVPFIL*VWTQTI
Trigger: TATAGTCTGTGTCCATACTCACAGAATGAATGGCAC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGTTGATTCCAAAGGCTaGCCTCTCTTGGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIVDSKG*PLLEDL
Trigger: AAGATCTTCCAAGAGAGGGCAGCCTTTGGAATCAAC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTCTCATATACACTGCTaGACTTGGAGTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEISHIHC*TWSFQA
Trigger: TGCCTGGAAACTCCAAGTGCAGCAGTGTATATGAGA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTCTTCGCTCCACAGCTaGTGCTTAATGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVSSLHS*CLMCGK
Trigger: TTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTTCTCTGCCGCCTTCCTaGTCAGCTTGCCATGATAGC +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGSLPPS*SACHDS
Trigger: GCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGA...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATACCAAGAGGCTCTCTaGCGCCTTCCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTYQEAL*RLPAQL
Trigger: AAGCTGAGCAGGAAGGCGGCAGAGAGCCTCTTGGTA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAATGGTCTTGGAAAGATaGACTTCACAGTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEMVLER*TSQFVL
Trigger: GAGCACAAACTGTGAAGTGCATCTTTCCAAGACCAT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCTGCGACGGCAAGGTaGCATCTTCAGTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPATAR*HLQSAG
Trigger: ACCTGCCGACTGAAGATGCCACCTTGCCGTCGCAGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGCGGCTGAACAGTTTCTaGTGCCTTTCCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLRLNSF*CLSAVP
Trigger: TGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGGCAGGCTGGGCTGTaGCACCCGGCTGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSWQAGL*HPAEQF
Trigger: AAACTGTTCAGCCGGGTGCCACAGCCCAGCCTGCCA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGCAAAGAATGTGAGCTaGCAGGCTGGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKAKNVS*QAGLWH
Trigger: GTGCCACAGCCCAGCCTGCCAGCTCACATTCTTTGC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGTCCGCATTGTTTCACTaGCTTGTGATGGGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQSALFH*LVMGPC
Trigger: ACACGGACCCATCACAAGTCAGTGAAACAATGCGGA...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTGAGCCAGGTGTACTTTaGAGAGCCTGTGTATTAATG +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVEPGVL*RACVLM
Trigger: CATTAATACACAGGCTCTTCAAAGTACACCTGGCTC...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAACATTATCAAATACATaGTCCTTGGTCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNETLSNT*SLVLTL
Trigger: CAAGGTGAGGACCAAGGATCATGTATTTGATAATGT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGCTGAATAGCAAACACTaGGAAATGCTAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLLNSKH*EMLGQR
Trigger: CCTCTGGCCTAGCATTTCTCAGTGTTTGCTATTCAG...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAAAACTATGTGAATGTTaGTCTCAGGTGTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEKLCEC*SQVCHS
Trigger: TGAATGGCACACCTGAGATCAACATTCACATAGTTT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCCCGGAGAAAACACTaGGCTACTCCAACCACAGTG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPRRKH*ATPTTV
Trigger: CACTGTGGTTGGAGTAGCTCAGTGTTTTCTCCGGGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537958.5
CDS-3UTR GCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGTGGAAGATCTTGTCTTaGATCCCGTTCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLWKILS*IPFWAT
Trigger: GGTGGCCCAGAACGGGATGCAAGACAAGATCTTCCA...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAAGGAACTTTCGAACCTaGTCCCTTCGGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTRNFRT*SLRLSQ
Trigger: CTGTGAGAGCCGAAGGGAGCAGGTTCGAAAGTTCCT...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGGCCAGCTTCATGCTTaGCATGCGGGGGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSGQLHA*HAGDQG
Trigger: ACCTTGATCCCCCGCATGGCAAGCATGAAGCTGGCC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAAGGTGCTGTAGAAAGTaGCTGTCCTGCCTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTRCCRK*LSCLLL
Trigger: TAGGAGCAGGCAGGACAGGCACTTTCTACAGCACCT...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCCATCCCCAACAGGTaGTGTAGAAAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPIPNR*CRKCLS
Trigger: GGACAGGCACTTTCTACAGCACCTGTTGGGGATGGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGTCACACAGTAGTTCATaGCCATCCCCAACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQSHSSS*PSPTGA
Trigger: AGCACCTGTTGGGGATGGGCATGAACTACTGTGTGA...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCCACCTACTGGTGGCTaGTTCCCTGGAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQPPTGG*FPGISL
Trigger: CAATGAAATTCCAGGGAAGCAGCCACCAGTAGGTGG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGTATCTCGCTGGGACTaGACCCCTCTTGGATGGACA +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKVSRWD*TPLGWT
Trigger: TGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATAC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTTGGCCAGGGGATGTTaGACTCTCTCGAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLLARGC*TLSNQK
Trigger: TTTTTGGTTCGAGAGAGTGCAACATCCCCTGGCCAA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGAAAGGCACATACCACTaGCCCAGCAGTTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLKGTYH*PSSSFK
Trigger: CTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTT...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGAACACCACCTACTGGTaGCTGCTTCCCTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQNTTYW*LLPWNF
Trigger: GAAATTCCAGGGAAGCAGCCACCAGTAGGTGGTGTT...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCAAATACATGATCCTTaGTCCTCACCTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVQIHDP*SSPCLQ
Trigger: CTGAAGGCAAGGTGAGGACCAAGGATCATGTATTTG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGTTTGCAGCCGAAAGCTaGGATGTGCAGGATGATACG +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLFAAES*DVQDDT
Trigger: CGTATCATCCTGCACATCTCAGCTTTCGGCTGCAAA...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCAAGATTCATCAATGTaGGACTGCATGTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVQDSSM*DCMLRW
Trigger: CCATCTCAACATGCAGTCTCACATTGATGAATCTTG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGCCCTCCAGAGGCAAATaGAATAGACTGCATATGATG +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLPSRGK*NRLHMM
Trigger: CATCATATGCAGTCTATTTCATTTGCCTCTGGAGGG...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCCCAGTGGTTGGGCTaGCCTTTGATTTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPQWLG*PLISSR
Trigger: TCTGCTGGAAATCAAAGGTCAGCCCAACCACTGGGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCTGAATAGCAAACACTaGGAAATGCTAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQLNSKH*EMLGQR
Trigger: CCTCTGGCCTAGCATTTCTCAGTGTTTGCTATTCAG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGCCACCTACTGGTGGCTaGTTCCCTGGAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLPPTGG*FPGISL
Trigger: CAATGAAATTCCAGGGAAGCAGCCACCAGTAGGTGG...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTCTCTGCCGCCTTCCTaGTCAGCTTGCCATGATAGC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSLPPS*SACHDS
Trigger: GCTATCATGGCAAGCTGAGCAGGAAGGCGGCAGAGA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTACCAAGAGGCTCTCTaGCGCCTTCCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSYQEAL*RLPAQL
Trigger: AAGCTGAGCAGGAAGGCGGCAGAGAGCCTCTTGGTA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCTTGGTCCTCACCTTaGCTTCAGGATCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPWSSP*LQDPPG
Trigger: TCCTGGTGGATCCTGAAGGCAAGGTGAGGACCAAGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGAAAGGCACATACCACTaGCCCAGCAGTTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQKGTYH*PSSSFK
Trigger: CTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTT...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGGTACTTATGACGTCTTaGGCCATTCCATTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLVLMTS*AIPLWH
Trigger: ATGCCACAATGGAATGGCCCAAGACGTCATAAGTAC...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATCTCTCTCCTCGGCATaGCTATCAATATGCACCTCC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTSLSSA*LSICTS
Trigger: GGAGGTGCATATTGATAGCCATGCCGAGGAGAGAGA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTGGTGGCTGCTTCCCTaGAATTTCATTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIWWLLP*NFIVIF
Trigger: GAATATTACAATGAAATTCCAGGGAAGCAGCCACCA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GCCAGGTGTACTTTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGTGGTGGCTGCTTCCCTaGAATTTCATTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: ARCTLKSLCINVAGVIKEWWLLP*NFIVIF
Trigger: GAATATTACAATGAAATTCCAGGGAAGCAGCCACCA...CTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAAAGTACACCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTAACACCACCTACTGGTaGCTGCTTCCCTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGNTTYW*LLPWNF
Trigger: GAAATTCCAGGGAAGCAGCCACCAGTAGGTGGTGTT...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTACTTTTCACACTGTATaGGGCAGTAAGCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEITFHTV*GSKPFV
Trigger: AACAAATGGCTTACTGCCCCATACAGTGTGAAAAGT...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGGACTGCACCCCTCTTaGATGGACATTACCTATTGC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTGLHPS*MDITYC
Trigger: GCAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCGGCTGAACAGTTTCTaGTGCCTTTCCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSRLNSF*CLSAVP
Trigger: TGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCACTCAGCACATATTaGCCAGGGGATGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPLSTY*PGDVAL
Trigger: GAGTGCAACATCCCCTGGCCAATATGTGCTGAGTGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTTTTGATCCGCATATCTaGAACACCACCTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGFDPHI*NTTYWW
Trigger: CCACCAGTAGGTGGTGTTTCAGATATGCGGATCAAA...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCTTGAAATATCAGTGTaGTGGTGCTTCAATACTGTC +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVLEISV*WCFNTV
Trigger: GACAGTATTGAAGCACCATCACACTGATATTTCAAG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTATGGCCTTAAAAAGTaGCATCCGTGCATACATATA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIYGLKK*HPCIHI
Trigger: TATATGTATGCACGGATGTCACTTTTTAAGGCCATA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCCCAAATTATCAAGTTaGAAGGCACATACCACTGCC +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQPKLSS*KAHTTA
Trigger: GGCAGTGGTATGTGCCTTTCAACTTGATAATTTGGG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTACTGAAGATTACTTTTaGCAAGGACTGTTGATAGGA +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEITEDYF*QGLLIG
Trigger: TCCTATCAACAGTCCTTGGCAAAAGTAATCTTCAGT...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAACTGCATATGATGATTTaGAATAATCTGTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNELHMMI*NNLLVV
Trigger: GACAACCAACAGATTATTGCAAATCATCATATGCAG...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACGGAGTTCAAAAGCCTaGCCTATGGTACTTATGACG +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTRSSKA*PMVLMT
Trigger: CGTCATAAGTACCATAGGGCAGGCTTTTGAACTCCG...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCACCTACTGGTGGCTaGTTCCCTGGAATTTCATTG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPPTGG*FPGISL
Trigger: CAATGAAATTCCAGGGAAGCAGCCACCAGTAGGTGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGTCCACTCGGCACGTGTaGTTCAATAATGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQSTRHV*FNNEVS
Trigger: AGATACCTCATTATTGAAGCACACGTGCCGAGTGGA...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATCTTCGCTCCACAGCTaGTGCTTAATGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTSSLHS*CLMCGK
Trigger: TTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCTTCCTGCTCAGCTTaGCATGATAGCATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPSCSA*HDSILR
Trigger: GCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTAGCTTCCCTCCCTCCTaGATTCCTCTCGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSFPPS*IPLGAF
Trigger: AAAAGCTCCGAGAGGAATCCAGGAGGGAGGGAAGCT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCTCTCTCCTCGGCATaGCTATCAATATGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKSLSSA*LSICTS
Trigger: GGAGGTGCATATTGATAGCCATGCCGAGGAGAGAGA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGAACACCACCTACTGGTaGCTGCTTCCCTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKNTTYW*LLPWNF
Trigger: GAAATTCCAGGGAAGCAGCCACCAGTAGGTGGTGTT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSNEVSR*DCTPLG
Trigger: TCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGAGAAGATGTTTTGCTTaGCCTCCCTGTAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLRRCFA*PPCSPL
Trigger: GAGTGGACTACAGGGAGGCCAAGCAAAACATCTTCT...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCTAGGCCAGAGGATTTaGGCCCCAATCCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLGQRI*APILLT
Trigger: GGTTAAAAGGATTGGGGCCCAAATCCTCTGGCCTAG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGCCCTATGGTACTTATaGCGTCTTGGGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSALWYL*RLGPFH
Trigger: ATGGAATGGCCCAAGACGTCATAAGTACCATAGGGC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTTGATCCGCATATCTaGAACACCACCTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKFDPHI*NTTYWW
Trigger: CCACCAGTAGGTGGTGTTTCAGATATGCGGATCAAA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCGTGGCTTGAACTTTaGTCCGCATATCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPWLEL*SAYLKH
Trigger: GTGTTTCAGATATGCGGATCAAAGTTCAAGCCACGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGAGCCAGGTGTACTTTaGAGAGCCTGTGTATTAATG +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTEPGVL*RACVLM
Trigger: CATTAATACACAGGCTCTTCAAAGTACACCTGGCTC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCGCTTCCAGAGGAGATaGTTGGCAAACTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKRFQRR*LANCYP
Trigger: TGGATAACAGTTTGCCAATCATCTCCTCTGGAAGCG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTATGGCCTTAAAAAGTaGCATCCGTGCATACATATA +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVYGLKK*HPCIHI
Trigger: TATATGTATGCACGGATGTCACTTTTTAAGGCCATA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGAACCAAAGGCCCTTTTaGCTGGGTTCGTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKNQRPF*LGSLIP
Trigger: TGGAATCAACGAACCCAGGCAAAAGGGCCTTTGGTT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGAAACAGGATACTGTTaGATAAATCGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTETGYC*INRLVV
Trigger: GACGACGAGGCGATTTATGCAACAGTATCCTGTTTC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTAGTGATCTCATTGATTaGAGCACTTCAACACAGCCC +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGSDLID*STSTQP
Trigger: GGGCTGTGTTGAAGTGCTGCAATCAATGAGATCACT...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCGGAGTTCAAAAGCCTaGCCTATGGTACTTATGACG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKRSSKA*PMVLMT
Trigger: CGTCATAAGTACCATAGGGCAGGCTTTTGAACTCCG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTTCTCATATACACTGCTaGACTTGGAGTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGSHIHC*TWSFQA
Trigger: TGCCTGGAAACTCCAAGTGCAGCAGTGTATATGAGA...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCATTACCTATTGCCCTaGTTTGTTCTAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVHYLLP*FVLNSS
Trigger: AGAACTGTTTAGAACAAAGCAGGGCAATAGGTAATG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCTTCCTGCTCAGCTTaGCATGATAGCATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPSCSA*HDSILR
Trigger: GCGAAGAATGCTATCATGGCAAGCTGAGCAGGAAGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGGCCAGGGGATGTTaGACTCTCTCGAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLARGC*TLSNQK
Trigger: TTTTTGGTTCGAGAGAGTGCAACATCCCCTGGCCAA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTGGCGGGGCAAATGACTaGCCTATTAACCCTTTATTT +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGGGAND*PINPLF
Trigger: AAATAAAGGGTTAATAGGCCAGTCATTTGCCCCGCC...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGCCGAGGCACCTCTTTaGTACCCAGGCAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSAEAPL*YPGKSF
Trigger: AAAACTTTTGCCTGGGTACCAAAGAGGTGCCTCGGC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGACTGCATGTTGAGATaGTCAGTTTTATATTCATTC +
Preference number: 4 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIDCMLR*SVLYSF
Trigger: GAATGAATATAAAACTGACCATCTCAACATGCAGTC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGGCTCGTTGATTAACTaGATCTTTAGCTACGTAGGC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTGSLIN*IFSYVG
Trigger: GCCTACGTAGCTAAAGATCCAGTTAATCAACGAGCC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTCTCTCTCCTCGGCATaGCTATCAATATGCACCTCC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSLSSA*LSICTS
Trigger: GGAGGTGCATATTGATAGCCATGCCGAGGAGAGAGA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTGGTGGCTGCTTCCCTaGAATTTCATTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLWWLLP*NFIVIF
Trigger: GAATATTACAATGAAATTCCAGGGAAGCAGCCACCA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGCACCCCTCTTGGATaGACATTACCTATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSCTPLG*TLPIAL
Trigger: CAGGGCAATAGGTAATGTCCATCCAAGAGGGGTGCA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGGACTGCACCCCTCTTaGATGGACATTACCTATTGC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSGLHPS*MDITYC
Trigger: GCAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTCAAATACATGATCCTTaGTCCTCACCTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGQIHDP*SSPCLQ
Trigger: CTGAAGGCAAGGTGAGGACCAAGGATCATGTATTTG...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAATGAACTTTGCCGAATaGATTTCTCTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTMNFAE*ISLCVC
Trigger: GCACACACACAGAGAAATTCATTCGGCAAAGTTCAT...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCCTCCAGAGGCAAATaGAATAGACTGCATATGATG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPSRGK*NRLHMM
Trigger: CATCATATGCAGTCTATTTCATTTGCCTCTGGAGGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTTTGATCCGCATATCTaGAACACCACCTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSFDPHI*NTTYWW
Trigger: CCACCAGTAGGTGGTGTTTCAGATATGCGGATCAAA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTATTTGTTCCGTGGCTTaGACTTTGATCCGCATATCT +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGICSVA*TLIRIS
Trigger: AGATATGCGGATCAAAGTTCAAGCCACGGAACAAAT...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGAGCCAGGTGTACTTTaGAGAGCCTGTGTATTAATG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKEPGVL*RACVLM
Trigger: CATTAATACACAGGCTCTTCAAAGTACACCTGGCTC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCAAAATGGGGTTTCTTaGAATATCAGTGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQQNGVS*NISVMV
Trigger: CACCATCACACTGATATTTCAAGAAACCCCATTTTG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR TCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTATCCATGTGTACTGCTaGCACCATTTACAGTCATTG +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGIHVYC*HHLQSL
Trigger: CAATGACTGTAAATGGTGTCAGCAGTACACATGGAT...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTCTGGTAGATAAACGGTaGAGACATCAGATACCTCAA +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGLVDKR*RHQIPQ
Trigger: TTGAGGTATCTGATGTCTGCACCGTTTATCTACCAG...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTCTTCGCTCCACAGCTaGTGCTTAATGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSSLHS*CLMCGK
Trigger: TTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAACCAAGTTAATACTCTaGTCAGCTAGAGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTTKLIL*SARVRP
Trigger: TGGTCTCACTCTAGCTGAGCAGAGTATTAACTTGGT...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCACATTTTTCTGCCTaGTTATATTCTAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLSHFSA*LYSSQA
Trigger: AGCTTGGCTAGAATATAAGCAGGCAGAAAAATGTGA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTAAGGCTGCCCTCTCTTaGAAGATCTTGTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSKAALS*KILSCI
Trigger: GATGCAAGACAAGATCTTCCAAGAGAGGGCAGCCTT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGCTTCCCTTGTAACTTaGGTTCTCATTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTASLVT*VLIPKS
Trigger: GGATTTTGGAATGAGAACCCAAGTTACAAGGGAAGC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGACTTTTCACACTGTATaGGGCAGTAAGCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQTFHTV*GSKPFV
Trigger: AACAAATGGCTTACTGCCCCATACAGTGTGAAAAGT...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTAGAAGATGTTTTGCTTaGCCTCCCTGTAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSRRCFA*PPCSPL
Trigger: GAGTGGACTACAGGGAGGCCAAGCAAAACATCTTCT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCAAATACATGATCCTTaGTCCTCACCTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKQIHDP*SSPCLQ
Trigger: CTGAAGGCAAGGTGAGGACCAAGGATCATGTATTTG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGATTTGTTCCGTGGCTTaGACTTTGATCCGCATATCT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKICSVA*TLIRIS
Trigger: AGATATGCGGATCAAAGTTCAAGCCACGGAACAAAT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGCTTCTGCATTTTGTCTaGTCATATCTATACGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLLLHFV*SYLYEV
Trigger: CACCTCGTATAGATATGATCAGACAAAATGCAGAAG...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGAACATCCTATCTTTGTaGGGCAGGATTTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKNILSL*GRIFHS
Trigger: ACTGTGGAAAATCCTGCCTCACAAAGATAGGATGTT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS-3UTR TCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATCACAGACACACCAATaGTCAATACTTGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTSQTHQ*SILVSF
Trigger: GAAGGATACAAGTATTGATCATTGGTGTGTCTGTGA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTCTCATATACACTGCTaGACTTGGAGTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSHIHC*TWSFQA
Trigger: TGCCTGGAAACTCCAAGTGCAGCAGTGTATATGAGA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTCCACTCGGCACGTGTaGTTCAATAATGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSTRHV*FNNEVS
Trigger: AGATACCTCATTATTGAAGCACACGTGCCGAGTGGA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGATGGTCTTGGAAAGATaGACTTCACAGTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKMVLER*TSQFVL
Trigger: GAGCACAAACTGTGAAGTGCATCTTTCCAAGACCAT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGGCTCGTTGATTAACTaGATCTTTAGCTACGTAGGC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSGSLIN*IFSYVG
Trigger: GCCTACGTAGCTAAAGATCCAGTTAATCAACGAGCC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGTACTTATGACGTCTTaGGCCATTCCATTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSVLMTS*AIPLWH
Trigger: ATGCCACAATGGAATGGCCCAAGACGTCATAAGTAC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGTGGTATCTGATAAGGTaGCCGACATTATCAAATACA +
Preference number: 4 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQWYLIR*PTLSNT
Trigger: TGTATTTGATAATGTCGGCCACCTTATCAGATACCA...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTATTGCCAAGGAAACTaGAACCCAAACAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKYCQGN*NPNRFS
Trigger: GCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCGAAGTTCGAATCGATaGAAACGTAGCTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSRSSNR*KRSSKG
Trigger: GCCTTTTGAGCTACGTTTCCATCGATTCGAACTTCG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537958.5
3UTR CAA 72 bp TGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTaGGTCTACATGTGGAAAATCTTTCCAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: CTPCLITLLVYQ*VYMWKIFPSAS
Trigger: TGAAGCACTTGGAAAGATTTTCCACATGTAGACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATGTGAGACTGCATGTTaGGATGGTCAGTTTTATATT +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTCETAC*DGQFYI
Trigger: AATATAAAACTGACCATCTCAACATGCAGTCTCACA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGACATTATCAAATACATaGTCCTTGGTCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKTLSNT*SLVLTL
Trigger: CAAGGTGAGGACCAAGGATCATGTATTTGATAATGT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGCCACAAAAGTACTaGAAAGCCTCCTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLPQKY*KASFHF
Trigger: AAAATGGAAGGAGGCTTTTCAGTACTTTTGTGGCAA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACATTACCTATTGCCCTaGTTTGTTCTAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTHYLLP*FVLNSS
Trigger: AGAACTGTTTAGAACAAAGCAGGGCAATAGGTAATG...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTATGGTCTTGGAAAGATaGACTTCACAGTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSMVLER*TSQFVL
Trigger: GAGCACAAACTGTGAAGTGCATCTTTCCAAGACCAT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATTTAGCTCATTTTATTaGCAAGGAAACTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTFSSFY*QGNWNP
Trigger: TGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTTGTATCAGGAACTCTTaGTACCAAGTTAATACTCTG +
Preference number: 4 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGCIRNS*YQVNTL
Trigger: CAGAGTATTAACTTGGTAGCAAGAGTTCCTGATACA...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGACTTTTCACACTGTATaGGGCAGTAAGCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKTFHTV*GSKPFV
Trigger: AACAAATGGCTTACTGCCCCATACAGTGTGAAAAGT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATGGTATCTGATAAGGTaGCCGACATTATCAAATACA +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTWYLIR*PTLSNT
Trigger: TGTATTTGATAATGTCGGCCACCTTATCAGATACCA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCAGTTGGTCTACATGTaGAAAATCTTTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKQLVYM*KIFPSA
Trigger: AGCACTTGGAAAGATTTTCCACATGTAGACCAACTG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCAGGCGAAAAGAAATaGGACCAAGTATTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPGEKK*DQVFLH
Trigger: GTGAAGAAATACTTGGTCCCATTTCTTTTCGCCTGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537958.5
CDS-3UTR TCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTACATTATCAAATACATaGTCCTTGGTCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSTLSNT*SLVLTL
Trigger: CAAGGTGAGGACCAAGGATCATGTATTTGATAATGT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCTTGAAATATCAGTGTaGTGGTGCTTCAATACTGTC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSLEISV*WCFNTV
Trigger: GACAGTATTGAAGCACCATCACACTGATATTTCAAG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR TCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCAAAATGGGGTTTCTTaGAATATCAGTGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSQNGVS*NISVMV
Trigger: CACCATCACACTGATATTTCAAGAAACCCCATTTTG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCATTACCTATTGCCCTaGTTTGTTCTAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKHYLLP*FVLNSS
Trigger: AGAACTGTTTAGAACAAAGCAGGGCAATAGGTAATG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGGCACTTCACAGTTTGTaGTCTATTTTATCTACAAAC +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLALHSL*SILSTN
Trigger: GTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGC...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR GCA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGCACTTCACAGTTTGTaGTCTATTTTATCTACAAAC +
Preference number: 4 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTALHSL*SILSTN
Trigger: GTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR GCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGCTTTTCTGTACACCATaGTTAATCACTCTGTTAGTT +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLLFCTP*LITLLV
Trigger: AACTAACAGAGTGATTAAGCATGGTGTACAGAAAAG...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGGTGGCTGCTTCCCTaGAATTTCATTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSWWLLP*NFIVIF
Trigger: GAATATTACAATGAAATTCCAGGGAAGCAGCCACCA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CCA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGCTTAACTATACAGACTaGTTATCAATAACGACCTCT +
Preference number: 4 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLLNYTD*LSITTS
Trigger: AGAGGTCGTTATTGATAACCAGTCTGTATAGTTAAG...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGGTATCTGATAAGGTaGCCGACATTATCAAATACA +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSWYLIR*PTLSNT
Trigger: TGTATTTGATAATGTCGGCCACCTTATCAGATACCA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR GCA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGCACTTCACAGTTTGTaGTCTATTTTATCTACAAAC +
Preference number: 4 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSALHSL*SILSTN
Trigger: GTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS GCA 90 bp CAGCATCCCGGGGTGCCCGAAGAGTCCTACATACAGCACGAGTCCTaGCAGGCTGTCCTGGCCGCGTTCTCGCATAGCCTTGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: QHPGVPEESYIQHES*QAVLAAFSHSLGSA
Trigger: AGCACTGCCAAGGCTATGCGAGAACGCGGCCAGGACAGCCTGGCAGGACTCGTGCTGTATGTAGGACTCTTCGGGCACCCCGGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 90 bp CCAGCTTCATGCTTGCCATGCGGGGGATCAAGGTGCACAGTGGGGTaGGGCTCTCCTGCGACGGCAAGGTGGCATCTTCAGTCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: PASCLPCGGSRCTVG*GSPATARWHLQSAG
Trigger: ACCTGCCGACTGAAGATGCCACCTTGCCGTCGCAGGAGAGCCCCACCCCACTGTGCACCTTGATCCCCCGCATGGCAAGCATGAAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 90 bp GTTGGCCAGCTTCATGCTTGCCATGCGGGGGATCAAGGTGCACAGTaGGGTGGGGCTCTCCTGCGACGGCAAGGTGGCATCTTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: VGQLHACHAGDQGAQ*GGALLRRQGGIFSR
Trigger: CCGACTGAAGATGCCACCTTGCCGTCGCAGGAGAGCCCCACCCCACTGTGCACCTTGATCCCCCGCATGGCAAGCATGAAGCTGGCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 90 bp CCAGGTCCTGCTGCGGTGGAGGTGCAGTCCCGGACCTACTTAAACTaGTTTCTGGGGAAGAGGGGCCGCTGGAACCTGGGTCCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: PGPAAVEVQSRTYLN*FLGKRGRWNLGPGF
Trigger: AAAGCCGGGACCCAGGTTCCAGCGGCCCCTCTTCCCCAGAAACCAGTTTAAGTAGGTCCGGGACTGCACCTCCACCGCAGCAGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp TCGTTCCGAAAGCGGCTGTACTTGGCCCTGTGCAGCATCCCGGGGTaGCCGAAGAGTCCTACATACAGCACGAGTCCTGCCAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SFRKRLYLALCSIPG*PKSPTYSTSPARLS
Trigger: GGACAGCCTGGCAGGACTCGTGCTGTATGTAGGACTCTTCGGGCACCCCGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTCGGAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 90 bp CAGTCCCGGACCTACTTAAACTGGTTTCTGGGGAAGAGGGGCCGCTaGAACCTGGGTCCCGGCTTTCCTGGAGCTTCAGCCGAGGCACCT +
Preference number: 5 (lower is better)
Translates to: QSRTYLNWFLGKRGR*NLGPGFPGASAEAP
Trigger: AGGTGCCTCGGCTGAAGCTCCAGGAAAGCCGGGACCCAGGTTCCAGCGGCCCCTCTTCCCCAGAAACCAGTTTAAGTAGGTCCGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 90 bp CCTTGTTCCCGACCGAGCCTCCGGAGCTACCTTCGTCCAAGGACGTaGTCGACTCGTTCCGAAAGCGGCTGTACTTGGCCCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PCSRPSLRSYLRPRT*STRSESGCTWPCAA
Trigger: TGCTGCACAGGGCCAAGTACAGCCGCTTTCGGAACGAGTCGATCACGTCCTTGGACGAAGGTAGCTCCGGAGGCTCGGTCGGGAACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp GAATCAGGGGTTAGGGCGGTTGCCCTGTGTCCCACCAGGTCCTGCTaGGGTGGAGGTGCAGTCCCGGACCTACTTAAACTGGTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: ESGVRAVALCPTRSC*GGGAVPDLLKLVSG
Trigger: CCCAGAAACCAGTTTAAGTAGGTCCGGGACTGCACCTCCACCGCAGCAGGACCTGGTGGGACACAGGGCAACCGCCCTAACCCCTGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 90 bp CCAGCCAGGAGTACTACTGACGGGCGCTGCTCCGCATTGTTTCACTaGCTTGTGATGGGTCCGTGTTCCTCAGATCCCCTCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PARSTTDGRCSALFH*LVMGPCSSDPLPAC
Trigger: GCAGGCTGGGAGGGGATCTGAGGAACACGGACCCATCACAAGTCAGTGAAACAATGCGGAGCAGCGCCCGTCAGTAGTACTCCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp CACGAATCAGGGGTTAGGGCGGTTGCCCTGTGTCCCACCAGGTCCTaGTGCGGTGGAGGTGCAGTCCCGGACCTACTTAAACTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: HESGVRAVALCPTRS*CGGGAVPDLLKLVS
Trigger: AGAAACCAGTTTAAGTAGGTCCGGGACTGCACCTCCACCGCAGCAGGACCTGGTGGGACACAGGGCAACCGCCCTAACCCCTGATTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp AAGGACGTGATCGACTCGTTCCGAAAGCGGCTGTACTTGGCCCTGTaGAGCATCCCGGGGTGCCCGAAGAGTCCTACATACAGCACGAGT +
Preference number: 5 (lower is better)
Translates to: KDVIDSFRKRLYLAL*SIPGCPKSPTYSTS
Trigger: ACTCGTGCTGTATGTAGGACTCTTCGGGCACCCCGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTCGGAACGAGTCGATCACGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp ACCCTCACCCCAGCCTTCTGTTCTGCACACAGGAACTTTCGAACCTaGTCCCTTCGGCTCTCACAGGGCGGGGCAAATGACTGGCCTATT +
Preference number: 5 (lower is better)
Translates to: TLTPAFCSAHRNFRT*SLRLSQGGANDWPI
Trigger: AATAGGCCAGTCATTTGCCCCGCCCTGTGAGAGCCGAAGGGAGCAGGTTCGAAAGTTCCTGTGTGCAGAACAGAAGGCTGGGGTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 90 bp TGCCCGAAGAGTCCTACATACAGCACGAGTCCTGCCAGGCTGTCCTaGCCGCGTTCTCGCATAGCCTTGGCAGTGCTGAAACAGGATACT +
Preference number: 5 (lower is better)
Translates to: CPKSPTYSTSPARLS*PRSRIALAVLKQDT
Trigger: AGTATCCTGTTTCAGCACTGCCAAGGCTATGCGAGAACGCGGCCAGGACAGCCTGGCAGGACTCGTGCTGTATGTAGGACTCTTCGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 90 bp ATCTTGTCTTGCATCCCGTTCTGGGCCACCAGCCAGGAGTACTACTaGCGGGCGCTGCTCCGCATTGTTTCACTGACTTGTGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: ILSCIPFWATSQEYY*RALLRIVSLTCDGS
Trigger: GGACCCATCACAAGTCAGTGAAACAATGCGGAGCAGCGCCCGTCAGTAGTACTCCTGGCTGGTGGCCCAGAACGGGATGCAAGACAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp CCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGGTACTTATGACGTCTaGGGCCATTCCATTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PAEQFLVPFRSAMGSPVVGTYDV*GHSIVA
Trigger: TGCCACAATGGAATGGCCCAAGACGTCATAAGTACC...AACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CAA 90 bp CGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTGGGGACTGCACCCCTCTaGGATGGACATTACCAAATA +
Preference number: 5 (lower is better)
Translates to: RLNSFWCLSAVPWAPQWLGTAPL*DGHYQI
Trigger: TATTTGGTAATGTCCATCCAAGAGGGGTGCAGTCCC...CAACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CAA 90 bp CCGGCTGAACAGTTTCTGGTGCCTTTCCGCAGTGCCATGGGCTCCCCAGTGGTTCATTTGTTCCGTGGCTaGAACTTTGATCCGCATATC +
Preference number: 5 (lower is better)
Translates to: PAEQFLVPFRSAMGSPVVHLFRG*NFDPHI
Trigger: GATATGCGGATCAAAGTTCAAGCCACGGAACAAATG...AACCACTGGGGAGCCCATGGCACTGCGGAAAGGCACCAGAAACTGTTCAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS CCA 90 bp GTCCTCACCTTGCCTTCAGGATCCACCAGGAGAAGATGTTTTGCTTaGCCTCCCTGTAGTCCACTCAGCACATATTGGCCAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: VLTLPSGSTRRRCFA*PPCSPLSTYWPGDV
Trigger: AACATCCCCTGGCCAATATGTGCTGAGTGGACTACAGGGAGGCCAAGCAAAACATCTTCTCCTGGTGGATCCTGAAGGCAAGGTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCGAAAGCGGCTGTACTaGGCCCTGTGCAGCATCCCG +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIRKRLY*ALCSIP
Trigger: CGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTCG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp TATGAACCAAAGGCCCTTTTGCCTGGGTTCGTTGATTCCAAAGGCTaGCCTCTCTTGGAAGATCTTGTCTTGCATCCCGTTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: YEPKALLPGFVDSKG*PLLEDLVLHPVLGH
Trigger: GTGGCCCAGAACGGGATGCAAGACAAGATCTTCCAAGAGAGGGCAGCCTTTGGAATCAACGAACCCAGGCAAAAGGGCCTTTGGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGGCTGCGGCGAGCCCTaGTTCCCGACCGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKGCGEP*FPTEPP
Trigger: CGGAGGCTCGGTCGGGAACAAGGGCTCGCCGCAGCC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGCAGGGGTTAGGGCGGTaGCCCTGTGTCCCACCAGGT +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLQGLGR*PCVPPG
Trigger: ACCTGGTGGGACACAGGGCAACCGCCCTAACCCCTG...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp AGGATACTGTTGCATAAATCGCCTCGTCGTCTGGTAGATAAACGGTaGAGACATCAGATACCTCAACGCCCGATGCAACTCACAGCAGCC +
Preference number: 5 (lower is better)
Translates to: RILLHKSPRRLVDKR*RHQIPQRPMQLTAA
Trigger: GGCTGCTGTGAGTTGCATCGGGCGTTGAGGTATCTGATGTCTGCACCGTTTATCTACCAGACGACGAGGCGATTTATGCAACAGTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 90 bp AAGAGATCCACTCGGCACGTGTGCTTCAATAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGATGGACATTACCTATTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: KRSTRHVCFNNEVSR*DCTPLGWTLPIALL
Trigger: AAGCAGGGCAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATTATTGAAGCACACGTGCCGAGTGGATCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAACCAGTGTTCTCGCCTaGGAATCCTTGTCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNETSVLA*ESLSGE
Trigger: CTCTCCCGACAAGGATTCCAAGGCGAGAACACTGGT...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCAAAGTGGCCGGGTaGGCCAGCTTCATGCTTGCC +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVSKVAG*ASFMLA
Trigger: GGCAAGCATGAAGCTGGCCAACCCGGCCACTTTGCT...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAATTTTGCCTGGGTTCGTaGATTCCAAAGGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEFCLGS*IPKAAL
Trigger: GAGGGCAGCCTTTGGAATCAACGAACCCAGGCAAAA...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTCCTTGGTCCTCACCTaGCCTTCAGGATCCACCAGG +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVSLVLT*PSGSTR
Trigger: CCTGGTGGATCCTGAAGGCAAGGTGAGGACCAAGGA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS CCA 90 bp ATGTTCGAGGGCAGGAAGCATCCAACACAGGAGAAAGATTTAGGCTaGGAGGCTAGGCCAGTCTCTCTTTTCACATTTTTCTGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: MFEGRKHPTQEKDLG*EARPVSLFTFFCLL
Trigger: AAGCAGGCAGAAAAATGTGAAAAGAGAGACTGGCCTAGCCTCCCAGCCTAAATCTTTCTCCTGTGTTGGATGCTTCCTGCCCTCGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396535.7
ENST00000559289.1
CDS-3UTR CAA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGCTGCATCACTAGCCTaGCAGGAGCCTAGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEAASLA*QEPSRN
Trigger: ATTTCTACTAGGCTCCTGCAAGGCTAGTGATGCAGC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp TCTTCGCTCCACAGCTGCTGCTTAATGTGTGGCAAAGAATGTGAGCTGGCAGGCTATGTGACAGGCTCGTaGATTAACTGGATCTTTAGC +
Preference number: 5 (lower is better)
Translates to: SSLHSCCLMCGKECELAGYVTGS*INWIFS
Trigger: GCTAAAGATCCAGTTAATCAACGAGCCTGTCACATA...GCCTGCCAGCTCACATTCTTTGCCACACATTAAGCAGCAGCTGTGGAGCGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CAA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGGTACTTATGACGTCTaGGGCCATTCCATTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEGTYDV*GHSIVA
Trigger: TGCCACAATGGAATGGCCCAAGACGTCATAAGTACC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGGGACTGCACCCCTCTaGGATGGACATTACCTATTG +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIGTAPL*DGHYLL
Trigger: CAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCCC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGGGGCAGTAAGCCATTaGTTCCGTGGCTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIGAVSH*FRGLNF
Trigger: AAAGTTCAAGCCACGGAACAAATGGCTTACTGCCCC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp TTGAAGAGCCTGTGTATTAATGTAGCAGGGGTCATCAAAGAGATCCACTCGGCAGGGGCAGTAAGCCATTaGTTCCGTGGCTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: LKSLCINVAGVIKEIHSAGAVSH*FRGLNF
Trigger: AAAGTTCAAGCCACGGAACAAATGGCTTACTGCCCC...TGCCGAGTGGATCTCTTTGATGACCCCTGCTACATTAATACACAGGCTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CAA 90 bp GCTCAGCTTGCCATGATAGCATTCTTCGCTCCACAGCTGCTGCTTAATGTGTGGAGAGCCAGGTGTACTTaGAAGAGCCTGTGTATTAAT +
Preference number: 5 (lower is better)
Translates to: AQLAMIAFFAPQLLLNVWRARCT*KSLCIN
Trigger: ATTAATACACAGGCTCTTCAAAGTACACCTGGCTCT...CCACACATTAAGCAGCAGCTGTGGAGCGAAGAATGCTATCATGGCAAGCTGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTCCACTCAGCACATATaGGCCAGGGGATGTTGCACT +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVSTQHI*ARGCCT
Trigger: AGTGCAACATCCCCTGGCCAATATGTGCTGAGTGGA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCCAGGAGAAGATGTTTaGCTTGGCCTCCCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVPGEDV*LGLPVV
Trigger: GACTACAGGGAGGCCAAGCAAAACATCTTCTCCTGG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS CCA 90 bp TGGGTCTGCCTTTCGCAGCCCACTGACTCAAATGTTAATCTCCTTTaGCAACACCCTCACAGACACACCAATGATCAATACTTGTATCCT +
Preference number: 5 (lower is better)
Translates to: WVCLSQPTDSNVNLL*QHPHRHTNDQYLYP
Trigger: AGGATACAAGTATTGATCATTGGTGTGTCTGTGAGGGTGTTGCCAAAGGAGATTAACATTTGAGTCAGTGGGCTGCGAAAGGCAGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396535.7
ENST00000559289.1
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTTTTCAGAAGCCCATTaGCAGCCGAAAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIFSEAH*QPKAEM
Trigger: CATCTCAGCTTTCGGCTGCAAATGGGCTTCTGAAAA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCTCGCCTTGGAATCCTaGTCGGGAGAGCCTAGACCC +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLALES*SGEPRP
Trigger: GGGTCTAGGCTCTCCCGACAAGGATTCCAAGGCGAG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTATTGGCCAGGGGATGTaGCACTCTCTCGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVIGQGM*HSLEPK
Trigger: TTTTGGTTCGAGAGAGTGCAACATCCCCTGGCCAAT...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCCACTCAGCACATATaGGCCAGGGGATGTTGCACT +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLSTQHI*ARGCCT
Trigger: AGTGCAACATCCCCTGGCCAATATGTGCTGAGTGGA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGGCTAGGCCAGAGGATTaGGGCCCCAATCCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLARPED*GPNPFN
Trigger: GTTAAAAGGATTGGGGCCCAAATCCTCTGGCCTAGC...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS CCA 90 bp TTTCGAACCTGCTCCCTTCGGCTCTCACAGGGCGGGGCAAATGACTaGCCTATTAACCCTTTATTTGTTCCAGTGATTGTTCATTTAAAA +
Preference number: 5 (lower is better)
Translates to: FRTCSLRLSQGGAND*PINPLFVPVIVHLK
Trigger: TTTTAAATGAACAATCACTGGAACAAATAAAGGGTTAATAGGCCAGTCATTTGCCCCGCCCTGTGAGAGCCGAAGGGAGCAGGTTCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGGCCAGCTTCATGCTaGCCATGCGGGGGATCAAGG +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSWPASC*PCGGSR
Trigger: CCTTGATCCCCCGCATGGCAAGCATGAAGCTGGCCA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGGGGGCAGTAAGCCATTaGTTCCGTGGCTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLGAVSH*FRGLNF
Trigger: AAAGTTCAAGCCACGGAACAAATGGCTTACTGCCCC...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp CCAGAGGATTTGGGCCCCAATCCTTTTAACCAGCAAATGGGACAGTCCAATGAAGATGGACATTACCTATaGCCCTGCTTTGTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: PEDLGPNPFNQQMGQSNEDGHYL*PCFVLN
Trigger: GTTTAGAACAAAGCAGGGCAATAGGTAATGTCCATC...TTCATTGGACTGTCCCATTTGCTGGTTAAAAGGATTGGGGCCCAAATCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCCAGGAGAAGATGTTTaGCTTGGCCTCCCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQPGEDV*LGLPVV
Trigger: GACTACAGGGAGGCCAAGCAAAACATCTTCTCCTGG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCTTGGTCCTCACCTaGCCTTCAGGATCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKSLVLT*PSGSTR
Trigger: CCTGGTGGATCCTGAAGGCAAGGTGAGGACCAAGGA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTCCCCAAATTATCAAGTaGAAAGGCACATACCACTGC +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIPQIIK*KGTYHC
Trigger: GCAGTGGTATGTGCCTTTCAACTTGATAATTTGGGG...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATTGGAAGATCTTGTCTaGCATCCCGTTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTLEDLV*HPVLGH
Trigger: GTGGCCCAGAACGGGATGCAAGACAAGATCTTCCAA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAAGCCGAGGCACCTCTTaGGTACCCAGGCAAAAGTTT +
Preference number: 5 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTSRGTS*VPRQKF
Trigger: AAACTTTTGCCTGGGTACCAAAGAGGTGCCTCGGCT...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTTGCTTCCCTTGTAACTaGGGTTCTCATTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEICFPCN*GSHSKI
Trigger: GATTTTGGAATGAGAACCCAAGTTACAAGGGAAGCA...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGATTGGCCAGGGGATGTaGCACTCTCTCGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQIGQGM*HSLEPK
Trigger: TTTTGGTTCGAGAGAGTGCAACATCCCCTGGCCAAT...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTCCTTGGTCCTCACCTaGCCTTCAGGATCCACCAGG +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSSLVLT*PSGSTR
Trigger: CCTGGTGGATCCTGAAGGCAAGGTGAGGACCAAGGA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTGGTCCATGATGGTCTaGGAAAGATGCACTTCACAG +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLWSMMV*ERCTSQ
Trigger: CTGTGAAGTGCATCTTTCCAAGACCATCATGGACCA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGCTAGGCCAGAGGATTaGGGCCCCAATCCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTARPED*GPNPFN
Trigger: GTTAAAAGGATTGGGGCCCAAATCCTCTGGCCTAGC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCGTTCTCGCATAGCCTaGGCAGTGCTGAAACAGGAT +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKRSRIA*AVLKQD
Trigger: ATCCTGTTTCAGCACTGCCAAGGCTATGCGAGAACG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACAGGTACTTATGACGTCTaGGGCCATTCCATTGTGGCA +
Preference number: 5 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTGTYDV*GHSIVA
Trigger: TGCCACAATGGAATGGCCCAAGACGTCATAAGTACC...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGGGACTGCACCCCTCTaGGATGGACATTACCTATTG +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKGTAPL*DGHYLL
Trigger: CAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCCC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGAGCCAGGTGTACTTaGAAGAGCCTGTGTATTAAT +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVRARCT*KSLCIN
Trigger: ATTAATACACAGGCTCTTCAAAGTACACCTGGCTCT...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCACTCAGCACATATaGGCCAGGGGATGTTGCACT +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKSTQHI*ARGCCT
Trigger: AGTGCAACATCCCCTGGCCAATATGTGCTGAGTGGA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTAAAGGCTGCCCTCTCTaGGAAGATCTTGTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGKGCPL*EDLVLH
Trigger: ATGCAAGACAAGATCTTCCAAGAGAGGGCAGCCTTT...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGAACCAAAGGCCCTTTaGCCTGGGTTCGTTGATTCC +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSEPKAL*PGFVDS
Trigger: GGAATCAACGAACCCAGGCAAAAGGGCCTTTGGTTC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTAGCATGTGAAATTGCAATAATCTGTTGGTaGTCAAGATTCATCAATGTG +
Preference number: 5 (lower is better)
Translates to: GTYHCPSSSFKLSLACEIAIICW*SRFINV
Trigger: CACATTGATGAATCTTGACAACCAACAGATTATTGC...AATTTCACATGCTAACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGGTACTTATGACGTCTaGGGCCATTCCATTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKGTYDV*GHSIVA
Trigger: TGCCACAATGGAATGGCCCAAGACGTCATAAGTACC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGCATTTGTTCCGTGGCTaGAACTTTGATCCGCATATC +
Preference number: 5 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQHLFRG*NFDPHI
Trigger: GATATGCGGATCAAAGTTCAAGCCACGGAACAAATG...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGGGGCAGTAAGCCATTaGTTCCGTGGCTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKGAVSH*FRGLNF
Trigger: AAAGTTCAAGCCACGGAACAAATGGCTTACTGCCCC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGGGACTGCACCCCTCTaGGATGGACATTACCTATTG +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSGTAPL*DGHYLL
Trigger: CAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCCC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGAGAGCCAGGTGTACTTaGAAGAGCCTGTGTATTAAT +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLRARCT*KSLCIN
Trigger: ATTAATACACAGGCTCTTCAAAGTACACCTGGCTCT...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCCAGGAGAAGATGTTTaGCTTGGCCTCCCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSPGEDV*LGLPVV
Trigger: GACTACAGGGAGGCCAAGCAAAACATCTTCTCCTGG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACATGGTCCATGATGGTCTaGGAAAGATGCACTTCACAG +
Preference number: 5 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTWSMMV*ERCTSQ
Trigger: CTGTGAAGTGCATCTTTCCAAGACCATCATGGACCA...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS TCA 90 bp GTAGGCAACATAGTCTGTAGTATCAGGATCCCCTCCAGAGGCAAATaGAATAGACTGCATATGATGATTTGCAATAATCTGTTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: VGNIVCSIRIPSRGK*NRLHMMICNNLLVV
Trigger: GACAACCAACAGATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCCTCTGGAGGGGATCCTGATACTACAGACTATGTTGCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTATTGGCCAGGGGATGTaGCACTCTCTCGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSIGQGM*HSLEPK
Trigger: TTTTGGTTCGAGAGAGTGCAACATCCCCTGGCCAAT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTCTTCAATACTGTCATTaGTTGGAATGCAAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVLQYCH*LECKSA
Trigger: AGCACTTTTGCATTCCAACAAATGACAGTATTGAAG...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp TATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTCGTTTTAGTGGCTTTTGATTaGATTCCACTGACATACACA +
Preference number: 5 (lower is better)
Translates to: YQVERHIPLPQQFIQVVVLVAFD*IPLTYT
Trigger: TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAA...AACGACAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTAACAGATTCAGCAACTaGCTGAAGGTCACACTGGTA +
Preference number: 5 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGNRFSN*LKVTLV
Trigger: TACCAGTGTGACCTTCAGCAAGTTGCTGAATCTGTT...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCTTCACTATAAGCTCTaGCATGCAGGGTCCCTAGAT +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLHYKL*HAGSLD
Trigger: ATCTAGGGACCCTGCATGCAAGAGCTTATAGTGAAG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537958.5
CDS TCA 90 bp GTAGGCAACATAGTCTGTAGTATCAGGATCCCCTCCAGAGGCAAATaGAATAGACTGCATATGATGATTTGCAATAATATGATCACAAGG +
Preference number: 5 (lower is better)
Translates to: VGNIVCSIRIPSRGK*NRLHMMICNNMITR
Trigger: CCTTGTGATCATATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCCTCTGGAGGGGATCCTGATACTACAGACTATGTTGCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS TCA 90 bp GTAGGCAACATAGTCTGTAGTATCAGGATCCCCTCCAGAGGCAAATaGAATAGACTGCATATGATGATTTGCAATAATCGCATTGCTAAT +
Preference number: 5 (lower is better)
Translates to: VGNIVCSIRIPSRGK*NRLHMMICNNRIAN
Trigger: ATTAGCAATGCGATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCCTCTGGAGGGGATCCTGATACTACAGACTATGTTGCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537958.5
ENST00000557797.5
ENST00000558220.1
CDS CCA 90 bp TTAGTTCTTAATATGCTGATCTGTGGTTATGGATGTTGTCTGGTTTaGAGACGTGGATTTACAAGTCATCAGTACATCGGTAAATTGCCC +
Preference number: 5 (lower is better)
Translates to: LVLNMLICGYGCCLV*RRGFTSHQYIGKLP
Trigger: GGGCAATTTACCGATGTACTGATGACTTGTAAATCCACGTCTCCAAACCAGACAACATCCATAACCACAGATCAGCATATTAAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558220.1
CDS-3UTR CAA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGTATGTGACAGGCTCGTaGATTAACTGGATCTTTAGC +
Preference number: 5 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLYVTGS*INWIFS
Trigger: GCTAAAGATCCAGTTAATCAACGAGCCTGTCACATA...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCATTTGTTCCGTGGCTaGAACTTTGATCCGCATATC +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKHLFRG*NFDPHI
Trigger: GATATGCGGATCAAAGTTCAAGCCACGGAACAAATG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp AAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACAGATCTTTTCTCACTGGTaGTTTAAGGCTTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: KQTAMLVAFDLIPLTYTQIFSHW*FKAYFA
Trigger: AGCGAAGTAAGCCTTAAACAACCAGTGAGAAAAGAT...CTGTGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTTGGTCCATGATGGTCTaGGAAAGATGCACTTCACAG +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSWSMMV*ERCTSQ
Trigger: CTGTGAAGTGCATCTTTCCAAGACCATCATGGACCA...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGAGTTGTGCTTTTAGCTaGTTATCAATGCAATATGGC +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLSCAFS*LSMQYG
Trigger: GCCATATTGCATTGATAACAAGCTAAAAGCACAACT...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCCCCAAATTATCAAGTaGAAAGGCACATACCACTGC +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKPQIIK*KGTYHC
Trigger: GCAGTGGTATGTGCCTTTCAACTTGATAATTTGGGG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGTTAGTGGCTTTTGATTaGATTCCACTGACATACACA +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLLVAFD*IPLTYT
Trigger: TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAA...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332408.9
ENST00000396535.7
CDS-3UTR CAA 90 bp CAAATTATCAAGTTGAAAGGCACATACCACTGCCCCAGCAGTTCATTCAAGTTGAGTCATTGCATCTATTaGTATCAGGAACTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: QIIKLKGTYHCPSSSFKLSHCIY*YQELLL
Trigger: TAGCAAGAGTTCCTGATACAAATAGATGCAATGACT...CAACTTGAATGAACTGCTGGGGCAGTGGTATGTGCCTTTCAACTTGATAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp GTGCAGGATGATACGCAGCGTGTTGAAATTTTTATGAATGAACTTTaGCGAATGAATTTCTCTGTGTGTGTGCAAGCTAATAAATCTGTG +
Preference number: 5 (lower is better)
Translates to: VQDDTQRVEIFMNEL*RMNFSVCVQANKSV
Trigger: CACAGATTTATTAGCTTGCACACACACAGAGAAATTCATTCGGCAAAGTTCATTCATAAAAATTTCAACACGCTGCGTATCATCCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGAATCCAGTGATCTCATaGATTGCAGCACTTCAACAC +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKNPVIS*IAALQH
Trigger: GTGTTGAAGTGCTGCAATCAATGAGATCACTGGATT...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTATGTGACAGGCTCGTaGATTAACTGGATCTTTAGC +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKYVTGS*INWIFS
Trigger: GCTAAAGATCCAGTTAATCAACGAGCCTGTCACATA...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTCATTTGTTCCGTGGCTaGAACTTTGATCCGCATATC +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSHLFRG*NFDPHI
Trigger: GATATGCGGATCAAAGTTCAAGCCACGGAACAAATG...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGGATGGACATTACCTATaGCCCTGCTTTGTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKDGHYL*PCFVLN
Trigger: GTTTAGAACAAAGCAGGGCAATAGGTAATGTCCATC...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTCTGTTAGTTTACCAGTaGGTCTACATGTGGAAAATC +
Preference number: 5 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGLLVYQ*VYMWKI
Trigger: GATTTTCCACATGTAGACCAACTGGTAAACTAACAG...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 90 bp CAGTGTGATGGTGCTTCAATACTGTCATTTGTTGGAATGCAAAAGTaGTGGATTATTATCTTTTCTCACTGGTTGTTTAAGGCTTACTTC +
Preference number: 5 (lower is better)
Translates to: QCDGASILSFVGMQK*WIIIFSHWLFKAYF
Trigger: GAAGTAAGCCTTAAACAACCAGTGAGAAAAGATAATAATCCAGCACTTTTGCATTCCAACAAATGACAGTATTGAAGCACCATCACACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGATGGACATTACCTATaGCCCTGCTTTGTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSDGHYL*PCFVLN
Trigger: GTTTAGAACAAAGCAGGGCAATAGGTAATGTCCATC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTAGAGCCAGGTGTACTTaGAAGAGCCTGTGTATTAAT +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSRARCT*KSLCIN
Trigger: ATTAATACACAGGCTCTTCAAAGTACACCTGGCTCT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp TTTAGCTCATTTTATTGCCAAGGAAACTGGAACCCAAACAGATTCAGCAACTTGGAATACTGGTTTTGTTaGCCCTCTTTTAAATCCATG +
Preference number: 5 (lower is better)
Translates to: FSSFYCQGNWNPNRFSNLEYWFC*PSFKSM
Trigger: CATGGATTTAAAAGAGGGCAAACAAAACCAGTATTC...CAAGTTGCTGAATCTGTTTGGGTTCCAGTTTCCTTGGCAATAAAATGAGCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp CGTAATGCTTTTCTGTACACCATGCTTAATCACTCTGTTAGTTTACCAGTTGGTCACCATTTACAGTCATaGCATCTATTTGTATCAGGA +
Preference number: 5 (lower is better)
Translates to: RNAFLYTMLNHSVSLPVGHHLQS*HLFVSG
Trigger: TCCTGATACAAATAGATGCAATGACTGTAAATGGTG...ACCAACTGGTAAACTAACAGAGTGATTAAGCATGGTGTACAGAAAAGCATTACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS-3UTR CAA 90 bp ATGAAACAGACAGCCATGTTAGTGGCTTTTGATTTGATTCCACTGACATACACACCTGAGGCTTTTAAGTaGAAGGTAAAAACAGGTAAA +
Preference number: 5 (lower is better)
Translates to: MKQTAMLVAFDLIPLTYTPEAFK*KVKTGK
Trigger: TTTACCTGTTTTTACCTTCAACTTAAAAGCCTCAGG...TGTGTATGTCAGTGGAATCAAATCAAAAGCCACTAACATGGCTGTCTGTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTATCTTTTCTCACTGGTaGTTTAAGGCTTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSIFSHW*FKAYFA
Trigger: AGCGAAGTAAGCCTTAAACAACCAGTGAGAAAAGAT...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GGTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGCTTCAATACTGTCATTaGTTGGAATGCAAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: GLGKMHFTVCALFYLQTKLQYCH*LECKSA
Trigger: AGCACTTTTGCATTCCAACAAATGACAGTATTGAAG...CTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS-3UTR CAA 90 bp GTCTTGGAAAGATGCACTTCACAGTTTGTGCTCTATTTTATCTACAAACAAAGTGCCTTAAAAGTATGTTaGAGACAACTTCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: VLERCTSQFVLYFIYKQSALKVC*RQLQIS
Trigger: GGAGATTTGAAGTTGTCTCAAACATACTTTTAAGGC...ACTTTGTTTGTAGATAAAATAGAGCACAAACTGTGAAGTGCATCTTTCCAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS GCA 72 bp GCCCGATGCAACTCACAGCAGCCACCTCTCCAACTCTaGTCTCGAGCTCGCCCACCTCGGCTCCCGGCCCCT +
Preference number: 6 (lower is better)
Translates to: ARCNSQQPPLQL*SRARPPRLPAP
Trigger: AGGGGCCGGGAGCCGAGGTGGGCGAGCTCGAGAGCAGAGTTGGAGAGGTGGCTGCTGTGAGTTGCATCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 90 bp TTTCAGTCTCTCCCTGGCCCAGGCAGAGGCACCAGTGTTCTCGCCTaGGAATCCTTGTCGGGAGAGCCTAGACCCAGGCTCCCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: FQSLPGPGRGTSVLA*ESLSGEPRPRLPAA
Trigger: CGCCGCCGGGAGCCTGGGTCTAGGCTCTCCCGACAAGGATTCCAAGGCGAGAACACTGGTGCCTCTGCCTGGGCCAGGGAGAGACTGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 72 bp GGGGTTAGGGCGGTTGCCCTGTGTCCCACCAGGTCCTaGTGCGGTGGAGGTGCAGTCCCGGACCTACTTAAA +
Preference number: 6 (lower is better)
Translates to: GVRAVALCPTRS*CGGGAVPDLLK
Trigger: TTTAAGTAGGTCCGGGACTGCACCTCCACCGCAGCAGGACCTGGTGGGACACAGGGCAACCGCCCTAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp TCCCTGGCCCAGGCAGAGGCACCAGTGTTCTCGCCTTaGAATCCTTGTCGGGAGAGCCTAGACCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SLAQAEAPVFSP*NPCRESLDPGS
Trigger: GGAGCCTGGGTCTAGGCTCTCCCGACAAGGATTCCAAGGCGAGAACACTGGTGCCTCTGCCTGGGCCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp CTTCATGCTTGCCATGCGGGGGATCAAGGTGCACAGTaGGGTGGGGCTCTCCTGCGACGGCAAGGTGGCATC +
Preference number: 6 (lower is better)
Translates to: LHACHAGDQGAQ*GGALLRRQGGI
Trigger: GATGCCACCTTGCCGTCGCAGGAGAGCCCCACCCCACTGTGCACCTTGATCCCCCGCATGGCAAGCATGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 72 bp CTCCCTGGCCCAGGCAGAGGCACCAGTGTTCTCGCCTaGGAATCCTTGTCGGGAGAGCCTAGACCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: LPGPGRGTSVLA*ESLSGEPRPRL
Trigger: GAGCCTGGGTCTAGGCTCTCCCGACAAGGATTCCAAGGCGAGAACACTGGTGCCTCTGCCTGGGCCAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 72 bp CGACCGAGCCTCCGGAGCTACCTTCGTCCAAGGACGTaGTCGACTCGTTCCGAAAGCGGCTGTACTTGGCCC +
Preference number: 6 (lower is better)
Translates to: RPSLRSYLRPRT*STRSESGCTWP
Trigger: GGGCCAAGTACAGCCGCTTTCGGAACGAGTCGATCACGTCCTTGGACGAAGGTAGCTCCGGAGGCTCGGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 72 bp GGGGTGCCCGAAGAGTCCTACATACAGCACGAGTCCTaGCAGGCTGTCCTGGCCGCGTTCTCGCATAGCCTT +
Preference number: 6 (lower is better)
Translates to: GVPEESYIQHES*QAVLAAFSHSL
Trigger: AAGGCTATGCGAGAACGCGGCCAGGACAGCCTGGCAGGACTCGTGCTGTATGTAGGACTCTTCGGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp GCTGCGGTGGAGGTGCAGTCCCGGACCTACTTAAACTaGTTTCTGGGGAAGAGGGGCCGCTGGAACCTGGGT +
Preference number: 6 (lower is better)
Translates to: AAVEVQSRTYLN*FLGKRGRWNLG
Trigger: ACCCAGGTTCCAGCGGCCCCTCTTCCCCAGAAACCAGTTTAAGTAGGTCCGGGACTGCACCTCCACCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 72 bp AAGGACGTGATCGACTCGTTCCGAAAGCGGCTGTACTaGGCCCTGTGCAGCATCCCGGGGTGCCCGAAGAGT +
Preference number: 6 (lower is better)
Translates to: KDVIDSFRKRLY*ALCSIPGCPKS
Trigger: ACTCTTCGGGCACCCCGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTCGGAACGAGTCGATCACGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 90 bp CCTTCGTCCAAGGACGTGATCGACTCGTTCCGAAAGCGGCTGTACTaGGCCCTGTGCAGCATCCCGGGGTGCCCGAAGAGTCCTACATAC +
Preference number: 6 (lower is better)
Translates to: PSSKDVIDSFRKRLY*ALCSIPGCPKSPTY
Trigger: GTATGTAGGACTCTTCGGGCACCCCGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTCGGAACGAGTCGATCACGTCCTTGGACGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 72 bp ATCGACTCGTTCCGAAAGCGGCTGTACTTGGCCCTGTaGAGCATCCCGGGGTGCCCGAAGAGTCCTACATAC +
Preference number: 6 (lower is better)
Translates to: IDSFRKRLYLAL*SIPGCPKSPTY
Trigger: GTATGTAGGACTCTTCGGGCACCCCGGGATGCTGCACAGGGCCAAGTACAGCCGCTTTCGGAACGAGTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp ACCTACTTAAACTGGTTTCTGGGGAAGAGGGGCCGCTaGAACCTGGGTCCCGGCTTTCCTGGAGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: TYLNWFLGKRGR*NLGPGFPGASA
Trigger: GGCTGAAGCTCCAGGAAAGCCGGGACCCAGGTTCCAGCGGCCCCTCTTCCCCAGAAACCAGTTTAAGTAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 72 bp TGCATCCCGTTCTGGGCCACCAGCCAGGAGTACTACTaGCGGGCGCTGCTCCGCATTGTTTCACTGACTTGT +
Preference number: 6 (lower is better)
Translates to: CIPFWATSQEYY*RALLRIVSLTC
Trigger: ACAAGTCAGTGAAACAATGCGGAGCAGCGCCCGTCAGTAGTACTCCTGGCTGGTGGCCCAGAACGGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 72 bp CCAGCCTTCTGTTCTGCACACAGGAACTTTCGAACCTaGTCCCTTCGGCTCTCACAGGGCGGGGCAAATGAC +
Preference number: 6 (lower is better)
Translates to: PAFCSAHRNFRT*SLRLSQGGAND
Trigger: GTCATTTGCCCCGCCCTGTGAGAGCCGAAGGGAGCAGGTTCGAAAGTTCCTGTGTGCAGAACAGAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp AGTCCTACATACAGCACGAGTCCTGCCAGGCTGTCCTaGCCGCGTTCTCGCATAGCCTTGGCAGTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SPTYSTSPARLS*PRSRIALAVLK
Trigger: TTTCAGCACTGCCAAGGCTATGCGAGAACGCGGCCAGGACAGCCTGGCAGGACTCGTGCTGTATGTAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 90 bp CCTTGGTCCTCACCTTGCCTTCAGGATCCACCAGGAGAAGATGTTTaGCTTGGCCTCCCTGTAGTCCACTCAGCACATATTGGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: PWSSPCLQDPPGEDV*LGLPVVHSAHIGQG
Trigger: CCCCTGGCCAATATGTGCTGAGTGGACTACAGGGAGGCCAAGCAAAACATCTTCTCCTGGTGGATCCTGAAGGCAAGGTGAGGACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS CCA 72 bp CCCGGCTTTCCTGGAGCTTCAGCCGAGGCACCTCTTTaGTACCCAGGCAAAAGTTTTTCAGACTCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: PGFPGASAEAPL*YPGKSFSDSAK
Trigger: CTTTGCTGAGTCTGAAAAACTTTTGCCTGGGTACCAAAGAGGTGCCTCGGCTGAAGCTCCAGGAAAGCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 72 bp ATAAACGGTGCAGACATCAGATACCTCAACGCCCGATaGAACTCACAGCAGCCACCTCTCCAACTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: INGADIRYLNAR*NSQQPPLQLCS
Trigger: AGAGCAGAGTTGGAGAGGTGGCTGCTGTGAGTTGCATCGGGCGTTGAGGTATCTGATGTCTGCACCGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS GCA 72 bp AAGGCCCTTTTGCCTGGGTTCGTTGATTCCAAAGGCTaGCCTCTCTTGGAAGATCTTGTCTTGCATCCCGTT +
Preference number: 6 (lower is better)
Translates to: KALLPGFVDSKG*PLLEDLVLHPV
Trigger: AACGGGATGCAAGACAAGATCTTCCAAGAGAGGGCAGCCTTTGGAATCAACGAACCCAGGCAAAAGGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 72 bp TGGGGCAGTAAGCCATTTGTTCCGTGGCTTGAACTTTaGTCCGCATATCTGAAACACCACCTACTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WGSKPFVPWLEL*SAYLKHHLLVA
Trigger: AGCCACCAGTAGGTGGTGTTTCAGATATGCGGATCAAAGTTCAAGCCACGGAACAAATGGCTTACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
ENST00000557797.5
ENST00000558220.1
CDS GCA 72 bp TTGCATAAATCGCCTCGTCGTCTGGTAGATAAACGGTaGAGACATCAGATACCTCAACGCCCGATGCAACTC +
Preference number: 6 (lower is better)
Translates to: LHKSPRRLVDKR*RHQIPQRPMQL
Trigger: GAGTTGCATCGGGCGTTGAGGTATCTGATGTCTGCACCGTTTATCTACCAGACGACGAGGCGATTTATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp TGCTCCCTTCGGCTCTCACAGGGCGGGGCAAATGACTaGCCTATTAACCCTTTATTTGTTCCAGTGATTGTT +
Preference number: 6 (lower is better)
Translates to: CSLRLSQGGAND*PINPLFVPVIV
Trigger: AACAATCACTGGAACAAATAAAGGGTTAATAGGCCAGTCATTTGCCCCGCCCTGTGAGAGCCGAAGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CCA 72 bp ACTCGGCACGTGTGCTTCAATAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGATGGACATTACCTATT +
Preference number: 6 (lower is better)
Translates to: TRHVCFNNEVSR*DCTPLGWTLPI
Trigger: AATAGGTAATGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATTATTGAAGCACACGTGCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS CCA 72 bp ACTCGGCACGTGTGCTTCAATAATGAGGTATCTCGCTaGGACTGCACCCCTCTTGGATGGACATTACCAAAT +
Preference number: 6 (lower is better)
Translates to: TRHVCFNNEVSR*DCTPLGWTLPN
Trigger: ATTTGGTAATGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATTATTGAAGCACACGTGCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS CCA 72 bp GGCAGGAAGCATCCAACACAGGAGAAAGATTTAGGCTaGGAGGCTAGGCCAGTCTCTCTTTTCACATTTTTC +
Preference number: 6 (lower is better)
Translates to: GRKHPTQEKDLG*EARPVSLFTFF
Trigger: GAAAAATGTGAAAAGAGAGACTGGCCTAGCCTCCCAGCCTAAATCTTTCTCCTGTGTTGGATGCTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396535.7
ENST00000559289.1
CDS CAA 72 bp GTATCTATGAACCAAAGGCCCTTTTGCCTGGGTTCGTaGATTCCAAAGGCTGCCCTCTCTTGGAAGATCTTG +
Preference number: 6 (lower is better)
Translates to: VSMNQRPFCLGS*IPKAALSWKIL
Trigger: CAAGATCTTCCAAGAGAGGGCAGCCTTTGGAATCAACGAACCCAGGCAAAAGGGCCTTTGGTTCATAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 72 bp TCAATAATGAGGTATCTCGCTGGGACTGCACCCCTCTaGGATGGACATTACCTATTGCCCTGCTTTGTTCTA +
Preference number: 6 (lower is better)
Translates to: SIMRYLAGTAPL*DGHYLLPCFVL
Trigger: TAGAACAAAGCAGGGCAATAGGTAATGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS CAA 72 bp GCAGTAGGGTTAAGTAACACAGAAACTGTTACGCTCTaGCATGCAGGGTCCCTAGATACGAAGTTCGAATCG +
Preference number: 6 (lower is better)
Translates to: AVGLSNTETVTL*HAGSLDTKFES
Trigger: CGATTCGAACTTCGTATCTAGGGACCCTGCATGCAAGAGCGTAACAGTTTCTGTGTTACTTAACCCTACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558220.1
CDS CAA 90 bp TTACAAGCAGCAGTAGGGTTAAGTAACACAGAAACTGTTACGCTCTaGCATGCAGGGTCCCTAGATACGAAGTTCGAATCGATGGAAACG +
Preference number: 6 (lower is better)
Translates to: LQAAVGLSNTETVTL*HAGSLDTKFESMET
Trigger: CGTTTCCATCGATTCGAACTTCGTATCTAGGGACCCTGCATGCAAGAGCGTAACAGTTTCTGTGTTACTTAACCCTACTGCTGCTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558220.1
CDS CCA 72 bp CTTTCGCAGCCCACTGACTCAAATGTTAATCTCCTTTaGCAACACCCTCACAGACACACCAATGATCAATAC +
Preference number: 6 (lower is better)
Translates to: LSQPTDSNVNLL*QHPHRHTNDQY
Trigger: GTATTGATCATTGGTGTGTCTGTGAGGGTGTTGCCAAAGGAGATTAACATTTGAGTCAGTGGGCTGCGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396535.7
ENST00000559289.1
CDS CAA 72 bp GAGTTCAAAAGCCTGCCCTATGGTACTTATGACGTCTaGGGCCATTCCATTGTGGCATTCCAATATGTGACA +
Preference number: 6 (lower is better)
Translates to: EFKSLPYGTYDV*GHSIVAFQYVT
Trigger: TGTCACATATTGGAATGCCACAATGGAATGGCCCAAGACGTCATAAGTACCATAGGGCAGGCTTTTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
ENST00000557797.5
ENST00000558220.1
CDS CAA 72 bp TCAATAATGAGGTATCTCGCTGGGACTGCACCCCTCTaGGATGGACATTACCAAATAGCACAACTTTTCACA +
Preference number: 6 (lower is better)
Translates to: SIMRYLAGTAPL*DGHYQIAQLFT
Trigger: TGTGAAAAGTTGTGCTATTTGGTAATGTCCATCCAAGAGGGGTGCAGTCCCAGCGAGATACCTCATTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557797.5
CDS TCA 72 bp TCAAGGCGGAACATCCTGAGATTGCCACAAAAGTACTaGAAAGCCTCCTTCCATTTTCAACATCCTATCTTT +
Preference number: 6 (lower is better)
Translates to: SRRNILRLPQKY*KASFHFQHPIF
Trigger: AAAGATAGGATGTTGAAAATGGAAGGAGGCTTTTCAGTACTTTTGTGGCAATCTCAGGATGTTCCGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396535.7
ENST00000559289.1
CDS CCA 72 bp AATATGCTGATCTGTGGTTATGGATGTTGTCTGGTTTaGAGACGTGGATTTACAAGTCATCAGTACATCGGT +
Preference number: 6 (lower is better)
Translates to: NMLICGYGCCLV*RRGFTSHQYIG
Trigger: ACCGATGTACTGATGACTTGTAAATCCACGTCTCCAAACCAGACAACATCCATAACCACAGATCAGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558220.1
CDS TCA 72 bp ATAGTCTGTAGTATCAGGATCCCCTCCAGAGGCAAATaGAATAGACTGCATATGATGATTTGCAATAATCGC +
Preference number: 6 (lower is better)
Translates to: IVCSIRIPSRGK*NRLHMMICNNR
Trigger: GCGATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCCTCTGGAGGGGATCCTGATACTACAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537958.5
ENST00000557797.5
ENST00000558220.1
CDS CAA 72 bp CCATCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCATaGATTCTACATTATGGTGAGTTGTATAATTCTACA +
Preference number: 6 (lower is better)
Translates to: PSSCRKTSSGLP*ILHYGELYNST
Trigger: TGTAGAATTATACAACTCACCATAATGTAGAATCAATGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS CAA 90 bp TTTGTTGGAATGCAAAAGTGCTGGATTATTATCTTTTCTCACTGGTaGTTTAAGGCTTACTTCGCTTCCAGAGGAGATGATTGGCAAACT +
Preference number: 6 (lower is better)
Translates to: FVGMQKCWIIIFSHW*FKAYFASRGDDWQT
Trigger: AGTTTGCCAATCATCTCCTCTGGAAGCGAAGTAAGCCTTAAACAACCAGTGAGAAAAGATAATAATCCAGCACTTTTGCATTCCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS TCA 72 bp ATAGTCTGTAGTATCAGGATCCCCTCCAGAGGCAAATaGAATAGACTGCATATGATGATTTGCAATAATCTG +
Preference number: 6 (lower is better)
Translates to: IVCSIRIPSRGK*NRLHMMICNNL
Trigger: CAGATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCCTCTGGAGGGGATCCTGATACTACAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS TCA 72 bp CATCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCATTaGTTCTACATTATGGTGAGTTGTATAATTCTACAT +
Preference number: 6 (lower is better)
Translates to: HLVAGKQAQGSH*FYIMVSCIILH
Trigger: ATGTAGAATTATACAACTCACCATAATGTAGAATCAATGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS CAA 72 bp ATGCAAAAGTGCTGGATTATTATCTTTTCTCACTGGTaGTTTAAGGCTTACTTCGCTTCCAGAGGAGATGAT +
Preference number: 6 (lower is better)
Translates to: MQKCWIIIFSHW*FKAYFASRGDD
Trigger: ATCATCTCCTCTGGAAGCGAAGTAAGCCTTAAACAACCAGTGAGAAAAGATAATAATCCAGCACTTTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332408.9
ENST00000396535.7
ENST00000537958.5
CDS TCA 72 bp ATAGTCTGTAGTATCAGGATCCCCTCCAGAGGCAAATaGAATAGACTGCATATGATGATTTGCAATAATATG +
Preference number: 6 (lower is better)
Translates to: IVCSIRIPSRGK*NRLHMMICNNM
Trigger: CATATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCCTCTGGAGGGGATCCTGATACTACAGACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396535.7
CDS GCA 72 bp GATACGCAGCGTGTTGAAATTTTTATGAATGAACTTTaGCGAATGAATTTCTCTGTGTGTGTGCAAGCTAAT +
Preference number: 6 (lower is better)
Translates to: DTQRVEIFMNEL*RMNFSVCVQAN
Trigger: ATTAGCTTGCACACACACAGAGAAATTCATTCGGCAAAGTTCATTCATAAAAATTTCAACACGCTGCGTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332408.9
CDS CAA 72 bp TTGATATTGCAAATGACGGTGGCCTTAAAAGTATGTTaGAGACAACTTCAAATCTCCATACGTTCTCGATTA +
Preference number: 6 (lower is better)
Translates to: LILQMTVALKVC*RQLQISIRSRL
Trigger: TAATCGAGAACGTATGGAGATTTGAAGTTGTCTCAAACATACTTTTAAGGCCACCGTCATTTGCAATATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396535.7
ENST00000559289.1