RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHANK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000251322

Ensembl transcript IDs: ENST00000262795.6, ENST00000414786.6, ENST00000445220.5, ENST00000659388.1, ENST00000664402.1, ENST00000673838.1, ENST00000673971.1, ENST00000673995.1, ENST00000674010.1, ENST00000674145.1

Found 1007 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGAACACAGTGGAGCGGCGCCGCTCCTCCAGCCGCCGGTCCTTaGCCGGGCCCGGGCCGCCGAACGCGAGCCCCGGGCCATCGCCCG +
Preference number: 1 (lower is better)
Translates to: TGTQWSGAAPPAAGP*PGPGRRTRAPGHRP
Trigger: CGGGCGATGGCCCGGGGCTCGCGTTCGGCGGCCCGGGCCCGGCCAAGGACCGGCGGCTGGAGGAGCGGCGCCGCTCCACTGTGTTCCTGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp TCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTaGCGCCCCTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGC +
Preference number: 1 (lower is better)
Translates to: SQAGWSRGCTAGPAA*RPSHHEQHLKGRWG
Trigger: GCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAGGGGCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR TCA 90 bp GGCTCTTGCGGCGCTGCGGCTTGGACGGAGCGAAGAGGCTGGCGCTaGAGGCGCCCAGGTTGGCGTAGGGGCTGTCGGGGCCGGGCGGCC +
Preference number: 1 (lower is better)
Translates to: GSCGAAAWTERRGWR*RRPGWRRGCRGRAA
Trigger: GGCCGCCCGGCCCCGACAGCCCCTACGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GTCTGCGGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTaGATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGCAGGGACGCC +
Preference number: 1 (lower is better)
Translates to: VCGGGGMPRPSRTGS*IEVLRGKRPSSRDA
Trigger: GGCGTCCCTGCTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCCGCAGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp TCGGGCGCCGAGTCCTGCAGGATGATCATGGAGCGCGCGCGCTTCTaGCGCTCGGGATACGGCAGCGGGCCGAGGGCCGCGCCCGGCTCG +
Preference number: 1 (lower is better)
Translates to: SGAESCRMIMERARF*RSGYGSGPRAAPGS
Trigger: CGAGCCGGGCGCGGCCCTCGGCCCGCTGCCGTATCCCGAGCGGCAGAAGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp CCCACGGCCAGGGCCGCGCGCTCCTGCGCGTCCTCCACCTGCAGCTaGTTCACCAGGGGGCTCTTGCGGCGCTGCGGCTTGGACGGAGCG +
Preference number: 1 (lower is better)
Translates to: PTARAARSCASSTCS*FTRGLLRRCGLDGA
Trigger: CGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAAGCAGCTGCAGGTGGAGGACGCGCAGGAGCGCGCGGCCCTGGCCGTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GCGGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTaGAGGATGATCATGGAGCGCGCGCGCTTCTGCCGCTCGGGATAC +
Preference number: 1 (lower is better)
Translates to: AGGGRGASPDSGAES*RMIMERARFCRSGY
Trigger: GTATCCCGAGCGGCAGAAGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 90 bp GGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATaGTCATGGAGCGCGCGCGCTTCTGCCGCTCGGGATACGGCAGCG +
Preference number: 1 (lower is better)
Translates to: GVEGRRPTRAPSPAG*SWSARASAARDTAA
Trigger: CGCTGCCGTATCCCGAGCGGCAGAAGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp TGGAGCGGGAGGGCTGTAGGGATGGCAGATCCGCGCCGGGGGCGCTaGCCTCGATGGCCCCCACGGACAGGAACACAGTGGAGCGGCGCC +
Preference number: 1 (lower is better)
Translates to: WSGRAVGMADPRRGR*PRWPPRTGTQWSGA
Trigger: GGCGCCGCTCCACTGTGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCTACAGCCCTCCCGCTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp AGGGCAGCGGCGACGGCGAGGGGGAGCGACTGCGCGCGCTCACGCTaGGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGA +
Preference number: 1 (lower is better)
Translates to: RAAATARGSDCARSR*APRSAPPWARAGWR
Trigger: TCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCGCAGTCGCTCCCCCTCGCCGTCGCCGCTGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTaGTCCGCGGGAAGCGCCCTTCCAGCAGGGACGCCAGCTTCTCGT +
Preference number: 1 (lower is better)
Translates to: GAGCRDPRAPGLASR*SAGSALPAGTPASR
Trigger: ACGAGAAGCTGGCGTCCCTGCTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp CAGCCAAGCCACGGGCCTGGGCTGGGCCTGGCCGGCAAAGCCTCCTaGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTC +
Preference number: 1 (lower is better)
Translates to: QPSHGPGLGLAGKAS*AQAVPRRRGEKTLF
Trigger: GAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGGAGGCTTTGCCGGCCAGGCCCAGCCCAGGCCCGTGGCTTGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp AGGGCTGTAGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATaGCCCCCACGGACAGGAACACAGTGGAGCGGCGCCGCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: RAVGMADPRRGRCPR*PPRTGTQWSGAAPP
Trigger: TGGAGGAGCGGCGCCGCTCCACTGTGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCTACAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GGCCTGGGCTGGGCCTGGCCGGCAAAGCCTCCTGGGCCCAGGCTGTaGCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCCTCAGG +
Preference number: 1 (lower is better)
Translates to: GLGWAWPAKPPGPRL*RVVAGRRRFSSSLR
Trigger: CCTGAGGGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGGAGGCTTTGCCGGCCAGGCCCAGCCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GACCTCCTGTCCAGCAGCAGGCGGCGCGGCGTGGCCAGGTGCAGGTaGCACTTGCGCTCCACCGCCTGGATCTCCTCGTACTCCCGCGAG +
Preference number: 1 (lower is better)
Translates to: DLLSSSRRRGVARCR*HLRSTAWISSYSRE
Trigger: CTCGCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCGCCGCCTGCTGCTGGACAGGAGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTaGTTCAGCAGCGGGTCCCTGAAGGTCACCGGCCCCTTCCCCAGC +
Preference number: 1 (lower is better)
Translates to: EAAWCCWAMSSLSED*FSSGSLKVTGPFPS
Trigger: GCTGGGGAAGGGGCCGGTGACCTTCAGGGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp CGGCGCGGCGTGGCCAGGTGCAGGTGCCACTTGCGCTCCACCGCCTaGATCTCCTCGTACTCCCGCGAGGATGAGTCGCACTGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: RRGVARCRCHLRSTA*ISSYSREDESHCAR
Trigger: CCTGGCACAGTGCGACTCATCCTCGCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp TGTCCAGCAGCAGGCGGCGCGGCGTGGCCAGGTGCAGGTGCCACTTaGGCTCCACCGCCTGGATCTCCTCGTACTCCCGCGAGGATGAGT +
Preference number: 1 (lower is better)
Translates to: CPAAGGAAWPGAGAT*APPPGSPRTPARMS
Trigger: ACTCATCCTCGCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCGCCGCCTGCTGCTGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp CCTCCGACTGGTGGGCCTCTGTTTGACGGTGGCGGCTCTGGAGTCTaGGTCTGCGATGTCTGGCCGCAGCGTTGGCTCTGCGGCGGCTGC +
Preference number: 1 (lower is better)
Translates to: PPTGGPLFDGGGSGV*VCDVWPQRWLCGGC
Trigger: GCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAGTCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GTGGCAGGTTCACAGCAAACACCAGCTCTGGCTCTTCCTCTGAGCTaGCCTGGCCTGGCCCGGCGTCTGCCGGGGTGCCACCAGGGGGCT +
Preference number: 1 (lower is better)
Translates to: VAGSQQTPALALPLS*PGLARRLPGCHQGA
Trigger: AGCCCCCTGGTGGCACCCCGGCAGACGCCGGGCCAGGCCAGGGCAGCTCAGAGGAAGAGCCAGAGCTGGTGTTTGCTGTGAACCTGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp GGTGCACGCCTCCACGGCCCCGCGCTAGTCCAGAGCGGCCCCTGGTaGCCACTCAGTAATCAGGCACACACACGGCTCCCACGTGCTCAG +
Preference number: 1 (lower is better)
Translates to: GARLHGPALVQSGPW*PLSNQAHTRLPRAQ
Trigger: CTGAGCACGTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGACTAGCGCGGGGCCGTGGAGGCGTGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 90 bp CACGGTGCACGCCTCCACGGCCCCGCGCTAGTCCAGAGCGGCCCCTaGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGTGCT +
Preference number: 1 (lower is better)
Translates to: HGARLHGPALVQSGP*WPLSNQAHTRLPRA
Trigger: AGCACGTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGACTAGCGCGGGGCCGTGGAGGCGTGCACCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 90 bp CAGCCTCCCTGGTCCACGCCCTTCCTGACTGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCC +
Preference number: 1 (lower is better)
Translates to: QPPWSTPFLTVRWVG*AAGEGTKQCTGRVS
Trigger: GGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCACAGTCAGGAAGGGCGTGGACCAGGGAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR GCA 90 bp ACTGGTGGGCCTCTGTTTGACGGTGGCGGCTCTGGAGTCTGCGTCTaGGATGTCTGGCCGCAGCGTTGGCTCTGCGGCGGCTGCCAGCAT +
Preference number: 1 (lower is better)
Translates to: TGGPLFDGGGSGVCV*DVWPQRWLCGGCQH
Trigger: ATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp ACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTaGCCAGGCCACCAACTGGTTCCTCCCCCAGGGAACGCGTGTCCT +
Preference number: 1 (lower is better)
Translates to: TELLRWATSWQGPAG*PGHQLVPPPGNACP
Trigger: AGGACACGCGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp GGTGGCGGCTCTGGAGTCTGCGTCTGCGATGTCTGGCCGCAGCGTTaGCTCTGCGGCGGCTGCCAGCATCTCGTCCAGCTTCTCCCCTTT +
Preference number: 1 (lower is better)
Translates to: GGGSGVCVCDVWPQR*LCGGCQHLVQLLPF
Trigger: AAAGGGGAGAAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp CCTCTGTTTGACGGTGGCGGCTCTGGAGTCTGCGTCTGCGATGTCTaGCCGCAGCGTTGGCTCTGCGGCGGCTGCCAGCATCTCGTCCAG +
Preference number: 1 (lower is better)
Translates to: PLFDGGGSGVCVCDV*PQRWLCGGCQHLVQ
Trigger: CTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp CGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTaGCAGGGTCCAGCAGGCTGCCCAGGCCACCAACTGGTTCCTCCC +
Preference number: 1 (lower is better)
Translates to: RPWGIDTELLRWATS*QGPAGCPGHQLVPP
Trigger: GGGAGGAACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp CTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATaGACACGGTGCACGCCTCCACGGCCCCGCGCTAGTCCAGAGCGG +
Preference number: 1 (lower is better)
Translates to: LWKRRQGALTGTPHA*TRCTPPRPRASPER
Trigger: CCGCTCTGGACTAGCGCGGGGCCGTGGAGGCGTGCACCGTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 90 bp GGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGCCACCAACTaGTTCCTCCCCCAGGGAACGCGTGTCCTTGTTCAGCTGCTGCAG +
Preference number: 1 (lower is better)
Translates to: GRLLGRVQQAAQATN*FLPQGTRVLVQLLQ
Trigger: CTGCAGCAGCTGAACAAGGACACGCGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GTGACGCCCAGCTCCACGAAGTCGTCCTTGGTAAGCGCGGGTAGGTaGGCGCCTTCTATCTCATGGTCCTCGAAGCGGTCGCGGTGCTCG +
Preference number: 1 (lower is better)
Translates to: VTPSSTKSSLVSAGR*APSISWSSKRSRCS
Trigger: CGAGCACCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGCGCACCTACCCGCGCTTACCAAGGACGACTTCGTGGAGCTGGGCGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp GGGCTCCTGCCCGTTGCTGGTGGCGTGCACAACGATGAGGCCAGCTaGCCGCTGCAGGGATGTGTCCAGGACGCTGAGGATCATGGACTT +
Preference number: 1 (lower is better)
Translates to: GLLPVAGGVHNDEAS*PLQGCVQDAEDHGL
Trigger: AAGTCCATGATCCTCAGCGTCCTGGACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGGGCAGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp GTGGACATGCTGGACACCGTGGAGATGGTGCTTGTGGTCTCCAGGTaGGGGTCGCTGGAGCTGCGTGTGTCAGCCTCCTCCACCCCAGAG +
Preference number: 1 (lower is better)
Translates to: VDMLDTVEMVLVVSR*GSLELRVSASSTPE
Trigger: CTCTGGGGTGGAGGAGGCTGACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 90 bp GGATGTGTCCAGGACGCTGAGGATCATGGACTTCTTGTCCTCGGGTaGCTTCCGCTCCTCCCGGGGGACCTTCTCTGCCTCCCTGCGAGC +
Preference number: 1 (lower is better)
Translates to: GCVQDAEDHGLLVLG*LPLLPGDLLCLPAS
Trigger: GCTCGCAGGGAGGCAGAGAAGGTCCCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCTCAGCGTCCTGGACACATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp CGCTCTCCGAGCTCAAGGTGGACATGCTGGACACCGTGGAGATGGTaGTTGTGGTCTCCAGGTGGGGGTCGCTGGAGCTGCGTGTGTCAG +
Preference number: 1 (lower is better)
Translates to: RSPSSRWTCWTPWRW*LWSPGGGRWSCVCQ
Trigger: CTGACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCTCGGAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp CCGAGCTCAAGGTGGACATGCTGGACACCGTGGAGATGGTGCTTGTaGTCTCCAGGTGGGGGTCGCTGGAGCTGCGTGTGTCAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: PSSRWTCWTPWRWCL*SPGGGRWSCVCQPP
Trigger: AGGAGGCTGACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp CTTGTTCAGCTGCTGCAGGCGGGAGCTGAGCTCACTGATCACAGTTaGTTTGTCGTCTTCAGGCCCAGGGAGCCCCCGGCTCTCCACGGG +
Preference number: 1 (lower is better)
Translates to: LVQLLQAGAELTDHS*FVVFRPREPPALHG
Trigger: CCCGTGGAGAGCCGGGGGCTCCCTGGGCCTGAAGACGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAGCAGCTGAACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 90 bp CCACTTGCGCTCCACCGCCTGGATCTCCTCGTACTCCCGCGAGGATaGGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGC +
Preference number: 1 (lower is better)
Translates to: PLALHRLDLLVLPRG*VALCQDLVQVTAGR
Trigger: GCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp GTCTGCGTCTGCGATGTCTGGCCGCAGCGTTGGCTCTGCGGCGGCTaGCAGCATCTCGTCCAGCTTCTCCCCTTTTCTTCTCCGAATGGA +
Preference number: 1 (lower is better)
Translates to: VCVCDVWPQRWLCGG*QHLVQLLPFSSPNG
Trigger: TCCATTCGGAGAAGAAAAGGGGAGAAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp TGCCCGTTGCTGGTGGCGTGCACAACGATGAGGCCAGCTGGCCGCTaGAGGGATGTGTCCAGGACGCTGAGGATCATGGACTTCTTGTCC +
Preference number: 1 (lower is better)
Translates to: CPLLVACTTMRPAGR*RDVSRTLRIMDFLS
Trigger: GGACAAGAAGTCCATGATCCTCAGCGTCCTGGACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp AAGTCGTCCTTGGTAAGCGCGGGTAGGTGCGCGCCTTCTATCTCATaGTCCTCGAAGCGGTCGCGGTGCTCGCCTAGGTGGATGCTCTCC +
Preference number: 1 (lower is better)
Translates to: KSSLVSAGRCAPSIS*SSKRSRCSPRWMLS
Trigger: GGAGAGCATCCACCTAGGCGAGCACCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGCGCACCTACCCGCGCTTACCAAGGACGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp CCACCAACTGGTTCCTCCCCCAGGGAACGCGTGTCCTTGTTCAGCTaGTGCAGGCGGGAGCTGAGCTCACTGATCACAGTTGGTTTGTCG +
Preference number: 1 (lower is better)
Translates to: PPTGSSPRERVSLFS*CRRELSSLITVGLS
Trigger: CGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCTGGGGGAGGAACCAGTTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 90 bp CGAGTAGAAAAGTGTGTCCGTCAGCGAAGGAGGTGTGGGTGTCAGTaGGTTCCCCGCTCTCCGAGCTCAAGGTGGACATGCTGGACACCG +
Preference number: 1 (lower is better)
Translates to: RVEKCVRQRRRCGCQ*VPRSPSSRWTCWTP
Trigger: CGGTGTCCAGCATGTCCACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGACGGACACACTTTTCTACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 90 bp CCAACTGGTTCCTCCCCCAGGGAACGCGTGTCCTTGTTCAGCTGCTaGAGGCGGGAGCTGAGCTCACTGATCACAGTTGGTTTGTCGTCT +
Preference number: 1 (lower is better)
Translates to: PTGSSPRERVSLFSC*RRELSSLITVGLSS
Trigger: AGACGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCTGGGGGAGGAACCAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp GGCAAACAGCTGGACCCAGGGTGCAGGATGGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGC +
Preference number: 1 (lower is better)
Translates to: GKQLDPGCRMASDFL*KRRQGALTGTPHAC
Trigger: GCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGCCATCCTGCACCCTGGGTCCAGCTGTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 90 bp GGTGGCTTCTCGAGTAGAAAAGTGTGTCCGTCAGCGAAGGAGGTGTaGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGGACATG +
Preference number: 1 (lower is better)
Translates to: GGFSSRKVCPSAKEV*VSVSSPLSELKVDM
Trigger: CATGTCCACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGACGGACACACTTTTCTACTCGAGAAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 90 bp GCACCCAGTTTCACCCACACACATAAAGGGCAGGACAGGAGACTTTaGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAG +
Preference number: 1 (lower is better)
Translates to: APSFTHTHKGQDRRL*GPRQGGFSAVVAQE
Trigger: CTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTGTCCTGCCCTTTATGTGTGTGGGTGAAACTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCGGCTGGCTCTGGCCTaGGCACCCACCCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRRLALA*APTLQA
Trigger: AGCCTGCAGGGTGGGTGCTCAGGCCAGAGCCAGCCG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 2 (lower is better)
Translates to: QPLHPLQRRGLHRARGASVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp GGTCTGCGGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTaGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGCAGGGACGC +
Preference number: 2 (lower is better)
Translates to: GLRRGRDAATLAHRV*HRGAPREAPFQQGR
Trigger: GCGTCCCTGCTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCCGCAGACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGGGCCAACTCCGGGGTaGCCGGGCGCTCCTCTTCGG +
Preference number: 2 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELGPTPG*PGAPLR
Trigger: CCGAAGAGGAGCGCCCGGGCACCCCGGAGTTGGCCC...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCACCACGAGCAGCACCTaGAGGGTCGGTGGGGCACAC +
Preference number: 2 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRTTSST*RVGGAH
Trigger: GTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGT...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGGTGCCGGCTGGCTCTaGCCTGAGCACCCACCCTGC +
Preference number: 2 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELGAGWL*PEHPPC
Trigger: GCAGGGTGGGTGCTCAGGCCAGAGCCAGCCGGCACC...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCGTCTGGCCGCAGCGTTaGCTCTGCGGCGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLVWPQR*LCGGCQ
Trigger: CTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGAC...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGGGCCACTAGGGCCCTaGCCAACCCCAGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELGPLGP*PTPDQL
Trigger: CAGCTGGTCTGGGGTTGGCCAGGGCCCTAGTGGCCC...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCTCCTCTTCCCTCAGGTaGCGCCTCCCCCTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLSSSLR*RLPLPS
Trigger: GGAGGGAAGGGGGAGGCGGCACCTGAGGGAAGAGGA...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCCGGAGATGGAAGACTaGGCAGCTGCAGTGGGACCA +
Preference number: 2 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRPEMED*AAAVGP
Trigger: TGGTCCCACTGCAGCTGCCCAGTCTTCCATCTCCGG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp AGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATGGCCCCCACGGACAGGAGCGCAGGGTCAGTGTaGTGCTGGGGGCCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: RDGRSAPGALPSMAPTDRSAGSV*CWGPSW
Trigger: CCAAGAGGGCCCCCAGCACCACACTGACCCTGCGCT...CCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGGAAGACTGGGCAGCTaGAGTGGGACCAGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRGRLGS*SGTSGS
Trigger: ACTTCCACTGGTCCCACTGCAGCTGCCCAGTCTTCC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGGTGCAGGTGCCACTTaGGCTCCACCGCCTGGATCT +
Preference number: 2 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELGAGAT*APPPGS
Trigger: AGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACC...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCCGGGGGACCTTCTCTaGCTCCCTGCGAGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLPGDLL*LPASRH
Trigger: GTGCCTGCTCGCAGGGAGGCAGAGAAGGTCCCCCGG...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp TCCACCTGCAGCTGCTTCACCAGGGGGCTCTTGCGGCGCTGCGGCTaGGACGGAGCGAAGAGGCTGGCGCTGAAGGCGCCCAGGTTGGCG +
Preference number: 2 (lower is better)
Translates to: STCSCFTRGLLRRCG*DGAKRLALKAPRLA
Trigger: CGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAAGCAGCTGCAGGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTCAGCTGGACCCAGGGTaGAGGATGGCCTCTGACTTT +
Preference number: 2 (lower is better)
Translates to: QPLHPLQRRGLHRARGASQLDPG*RMASDF
Trigger: AAAGTCAGAGGCCATCCTGCACCCTGGGTCCAGCTG...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCCCGTTGCTGGTGGCGTaGACAACGATGAGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELPLLVA*TTMRPA
Trigger: AGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGG...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp ACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGTGTGGGGCCAGGGTGTaGTCAGCCAAGCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: TLAHRVLHRGAPREAPFQCGARV*SAKPRA
Trigger: GGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACA...CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGTGCGGCGCTGCGGCTTaGACGGAGCGAAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWCGAAA*TERRGW
Trigger: CCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCA...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGTCCCTGAGGCCGGGCTaGGCACCGTGGTGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRSLRPG*APWWAR
Trigger: CCTCGCCCACCACGGTGCCCAGCCCGGCCTCAGGGA...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGCCGGCAGAGGCGGCGTaGTGCTGCTGGGCCATGAGC +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLPAEAA*CCWAMS
Trigger: GCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGG...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCACTGCTGGGCTTCCCTaGGGCCGGGCTGGGCACCGT +
Preference number: 2 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSTAGLP*GRAGHR
Trigger: ACGGTGCCCAGCCCGGCCTCAGGGAAGCCCAGCAGT...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTGGCCCGGGTGGCCACTaGCCCTTGTGGGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: AHLLGLVRDGEAGRLEDGGPGGH*PLWGQG
Trigger: ACCCTGGCCCCACAAGGGGCAGTGGCCACCCGGGCC...ACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGTGGCTCTGCGGCGGCTaGCAGCATCTCGTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLWLCGG*QHLVQL
Trigger: AAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCA...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 2 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTGTGGTCTCCAGGTaGGGGTCGCTGGAGCTGCGT +
Preference number: 2 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLLVVSR*GSLELR
Trigger: ACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAG...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp CGGTGGCGGCTCTGGAGTCTGCGTCTGCGATGTCTGGCCGCAGCGTaGGCTCTGCGGCGGCTGCCAGCATCTCGTCCAGCTTCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: RWRLWSLRLRCLAAA*ALRRLPASRPASPL
Trigger: AAGGGGAGAAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp GAGCGACTGCGCGCGCTCACGCTGCGCACCACGAAGCGCACCTCCTaGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: ERLRALTLRTTKRTS*GSCGMERLDDLRMV
Trigger: CACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCGCAGTCGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGCCGAGTCCTGCAGGATaGTCATGGAGCGCGCGCGCT +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLPSPAG*SWSARA
Trigger: AGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGG...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATGAAGAGGAGACAGGGTaGTCTCACAGGTACACCCCA +
Preference number: 2 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDEEETG*SHRYTP
Trigger: TGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTC...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGTCGCGCACCGGGTCTTaGATCGAGGTGCTCCGCGGG +
Preference number: 2 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRSRTGS*IEVLRG
Trigger: CCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGA...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGGTCCAGAGCGGCCCCTaGTGGCCACTCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLVQSGP*WPLSNQ
Trigger: CTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGAC...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCCCAGGCTGGGCTCCGTaGGGAGAAAGCCGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSPGWAP*GESRGS
Trigger: GCTTCCCCGGCTTTCTCCCCACGGAGCCCAGCCTGG...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp CCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTaGGCAGGGTCCAGCAGGCTGCCCAGGCCACCAACTGGTTCCTCC +
Preference number: 2 (lower is better)
Translates to: PTMGDRHRAAAMGDF*AGSSRLPRPPTGSS
Trigger: GGAGGAACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGTGGGGAGAGACCCTGTaGGGAAGATGGCTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLWGETL*GRWLRW
Trigger: CCACCGCAGCCATCTTCCTCACAGGGTCTCTCCCCA...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp GGAACCAGCCCGTGCGGCCTTTCACGGTTCCCTCCCAGAAACCGCCCTCCCCAAGCTGTGGCCAGTGGGTaGGGCCACGTGATGCACCAG +
Preference number: 2 (lower is better)
Translates to: GTSPCGLSRFPPRNRPPQAVASG*GHVMHQ
Trigger: CTGGTGCATCACGTGGCCTCACCCACTGGCCACAGC...TTGGGGAGGGCGGTTTCTGGGAGGGAACCGTGAAAGGCCGCACGGGCTGGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR-3UTR TCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGTGGCGTGCACAACGATaGGGCCAGCTGGCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRWRAQR*GQLAAA
Trigger: TGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCA...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 2 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACTTCCTGACTGTGCGCTaGGTGGGCTGGGCGGCCGGT +
Preference number: 2 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHFLTVR*VGWAAG
Trigger: ACCGGCCGCCCAGCCCACCCAGCGCACAGTCAGGAA...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGCGATGGGCGACTTCTTaGCAGGGTCCAGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLRWATS*QGPAGC
Trigger: GCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCG...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCGCATGTGGTCCAGGCTaGGGAGGTTTGTGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSACGPG*GGLCGR
Trigger: CCGGCCACACAAACCTCCTCAGCCTGGACCACATGC...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGTACTCCCGCGAGGATaGGTCGCACTGTGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLVLPRG*VALCQD
Trigger: ATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTAC...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACTCCCCTGCCCCGTTGTaGGGTGGCAGTGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHSPAPL*GGSGSE
Trigger: CTCACTGCCACTGCCACCCCACAACGGGGCAGGGGA...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGTCTCCCAGGCCGGCTaGTCCCGCGGGTGCACAGCA +
Preference number: 2 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLVSQAG*SRGCTA
Trigger: TGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGGGGCCAGGGGTGAGCTaGGGTCCAGGGGTTTGCCGG +
Preference number: 2 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVGPGVS*GPGVCR
Trigger: CCGGCAAACCCCTGGACCCCAGCTCACCCCTGGCCC...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGGACCGGGAGGGCGCCTaGGAGGCCAGAGCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVDREGA*EARARS
Trigger: AGAGCGAGCTCTGGCCTCCCAGGCGCCCTCCCGGTC...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp GAGCTAATCTCGGCGGGTGTGATCCTCCGACTGGTGGGCCTCTGTTaGACGGTGGCGGCTCTGGAGTCTGCGTCTGCGATGTCTGGCCGC +
Preference number: 2 (lower is better)
Translates to: ELISAGVILRLVGLC*TVAALESASAMSGR
Trigger: GCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAGTCGGAGGATCACACCCGCCGAGATTAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp GGCCGCTGCAGGGATGTGTCCAGGACGCTGAGGATCATGGACTTCTaGTCCTCGGGTGACTTCCGCTCCTCCCGGGGGACCTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GRCRDVSRTLRIMDF*SSGDFRSSRGTFSA
Trigger: GGCAGAGAAGGTCCCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCTCAGCGTCCTGGACACATCCCTGCAGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp TTCAGCTGCTGCAGGCGGGAGCTGAGCTCACTGATCACAGTTGGTTaGTCGTCTTCAGGCCCAGGGAGCCCCCGGCTCTCCACGGGGTCC +
Preference number: 2 (lower is better)
Translates to: FSCCRRELSSLITVG*SSSGPGSPRLSTGS
Trigger: GGACCCCGTGGAGAGCCGGGGGCTCCCTGGGCCTGAAGACGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAGCAGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACTGGGGAGAGACCCTGTaGGGAAGATGGCTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHWGETL*GRWLRW
Trigger: CCACCGCAGCCATCTTCCTCACAGGGTCTCTCCCCA...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGGAAGACTGGGCAGCTaGAGTGGGACCAGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLGRLGS*SGTSGS
Trigger: ACTTCCACTGGTCCCACTGCAGCTGCCCAGTCTTCC...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GTAGTGCCGAAAGAGCCGCTTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCAGCACCAGGGGTCACTaGCGAGAGCTCGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: VVPKEPLRPVLPRFRPCVSTRGH*RELGVI
Trigger: GATGACCCCGAGCTCTCGGCAGTGACCCCTGGTGCT...GACACACGGCCTGAAACGCGGGAGGACCGGACGAAGCGGCTCTTTCGGCACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACCTGGGCCCAGGCTGTaGCGCGTCGTCGCGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRPGPRL*RVVAGR
Trigger: TCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGACACCGTGGAGATGGTaGTTGTGGTCTCCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLTPWRW*LWSPGG
Trigger: CCCACCTGGAGACCACAAGCACCATCTCCACGGTGT...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCCCGGAGATGGAAGACTaGGCAGCTGCAGTGGGACCA +
Preference number: 2 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSPEMED*AAAVGP
Trigger: TGGTCCCACTGCAGCTGCCCAGTCTTCCATCTCCGG...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCCGTGCGGCCTTTCACGGTTCCCTCCCAGAAACCGCCCTCCCCAATGCTGAGCTCGTGCTGTGGCCAGTaGGTGAGGCCACGTGATGCA +
Preference number: 2 (lower is better)
Translates to: PVRPFTVPSQKPPSPMLSSCCGQ*VRPRDA
Trigger: TGCATCACGTGGCCTCACCCACTGGCCACAGCACGA...GCTCAGCATTGGGGAGGGCGGTTTCTGGGAGGGAACCGTGAAAGGCCGCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGCCGGCAAAGCCTCCTaGGCCCAGGCTGTGCCGCGT +
Preference number: 2 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAAGKAS*AQAVPR
Trigger: ACGCGGCACAGCCTGGGCCCAGGAGGCTTTGCCGGC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGAGAAGAGGGAGGCCTTaGACCTCCTGTCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRRRGRP*TSCPAA
Trigger: TGCTGCTGGACAGGAGGTCCAAGGCCTCCCTCTTCT...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp AAAGAGCCGCTTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCATGCTGCCTGTGGGTGAGGCCACGTaGTGCACCAGCTGGGCTGTT +
Preference number: 2 (lower is better)
Translates to: KEPLRPVLPRFRPCVMLPVGEAT*CTSWAV
Trigger: AACAGCCCAGCTGGTGCATCACGTGGCCTCACCCAC...AGGCAGCATGACACACGGCCTGAAACGCGGGAGGACCGGACGAAGCGGCTCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR-3UTR TCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGATGTGTCCAGGACGCTaGGGATCATGGACTTCTTGT +
Preference number: 2 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLMCPGR*GSWTSC
Trigger: ACAAGAAGTCCATGATCCTCAGCGTCCTGGACACAT...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGTCCTGACCTCGCATaGTGGACTAGGTTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGPDLA*WTRFPL
Trigger: GAGGGGGAACCTAGTCCAGCATGCGAGGTCAGGACC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGGGCCACTAGGGCCCTaGCCAACCCCAGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAGPLGP*PTPDQL
Trigger: CAGCTGGTCTGGGGTTGGCCAGGGCCCTAGTGGCCC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGCAGCTGTCATGGACTTaGAGCGCAGGGTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRQLSWT*SAGSVW
Trigger: CCACACTGACCCTGCGCTCCAAGTCCATGACAGCTG...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp ACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGTACAGACTTGGTCCGTaGAATCCCCTTCCGCAAGGA +
Preference number: 2 (lower is better)
Translates to: TLAHRVLHRGAPREAPFQYRLGP*NPLPQG
Trigger: TCCTTGCGGAAGGGGATTCCACGGACCAAGTCTGTA...CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGCCAGGTGGGGGTCGCTaGAGCTGCGTGTGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVPGGGR*SCVCQP
Trigger: AGGCTGACACACGCAGCTCCAGCGACCCCCACCTGG...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp TCTCCGAGCTCAAGGTGGACATGCTGGACACCGTGGAGATGGTGCTaGTGGTCTCCAGGTGGGGGTCGCTGGAGCTGCGTGTGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SPSSRWTCWTPWRWC*WSPGGGRWSCVCQP
Trigger: AGGCTGACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCTCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 90 bp CTGCCCAGGCCACCAACTGGTTCCTCCCCCAGGGAACGCGTGTCCTaGTTCAGCTGCTGCAGGCGGGAGCTGAGCTCACTGATCACAGTT +
Preference number: 2 (lower is better)
Translates to: LPRPPTGSSPRERVS*FSCCRRELSSLITV
Trigger: AACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGCCTCAAGCAGGCAACTaGGCCATGGCTTCATTTCTT +
Preference number: 2 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWPQAGN*AMASFL
Trigger: AAGAAATGAAGCCATGGCTCAGTTGCCTGCTTGAGG...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTCGGCGTCGGGACTGTaGACGGGTGTGGGGGACCGG +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSASGL*TGVGDR
Trigger: CCGGTCCCCCACACCCGTGCACAGTCCCGACGCCGA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCAGCTCAAGGTGGACATaGTGGACACCGTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSSSRWT*WTPWRW
Trigger: CCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCT...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCCCCCTCTGGGAGAATaGCCACCAGGAGCTGCGAAG +
Preference number: 2 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLPPLGE*PPGAAK
Trigger: CTTCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCCCCTGCCCCGTTGTaGGGTGGCAGTGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASPAPL*GGSGSE
Trigger: CTCACTGCCACTGCCACCCCACAACGGGGCAGGGGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGGCCTGGGAGGCCCTaGCGTTCAAACAATGAGCTA +
Preference number: 2 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGPGRP*RSNNEL
Trigger: TAGCTCATTGTTTGAACGCCAGGGCCTCCCAGGCCC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTTCATGCAACATTCCTaGCCCGGGCGCCGTCGTAAG +
Preference number: 2 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQFMQHS*PGRRRK
Trigger: CTTACGACGGCGCCCGGGCCAGGAATGTTGCATGAA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCACCTGAAGGGTCGGTaGGGCACACTAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLHLKGR*GTLELS
Trigger: GCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLASDFL*KRRQGA
Trigger: AGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGC...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGCACAGGAATCCAGGCTaGGCTCCGTGGGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVHRNPG*APWGES
Trigger: GCTTTCTCCCCACGGAGCCCAGCCTGGATTCCTGTG...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGCTCACTGATCACAGTTaGTTTGTCGTCTTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRLTDHS*FVVFRP
Trigger: GGGCCTGAAGACGACAAACCAACTGTGATCAGTGAG...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCGGGGTAGCGGCCACTaGGCCTCACCGAGTACGAGG +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHRGSGH*ASPSTR
Trigger: CCTCGTACTCGGTGAGGCCCAGTGGCCGCTACCCCG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR TCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGTTTGTGTGGCCGGTATaGGGGACAGACACAAATATC +
Preference number: 2 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRFVWPV*GTDTNI
Trigger: GATATTTGTGTCTGTCCCTCATACCGGCCACACAAA...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: AGRPVRALSNVQGESPSNKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACCCCCTCTGGGAGAATaGCCACCAGGAGCTGCGAAG +
Preference number: 2 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRPPLGE*PPGAAK
Trigger: CTTCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATGCGTCTGCGATGTCTaGCCGCAGCGTTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRCVCDV*PQRWLC
Trigger: GCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCACGCATGCACACGGTaGACGCCTCCACGGCCCCGC +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHHACTR*TPPRPR
Trigger: GCGGGGCCGTGGAGGCGTGCACCGTGTGCATGCGTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGGAGACGATCAAGGGTaGTGGCGGGGGTCACGGTGC +
Preference number: 2 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAGDDQG*WRGSRC
Trigger: GCACCGTGACCCCCGCCAGCACCCTTGATCGTCTCC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATGGAAGATGGCTGCGGTaGAGCGGCAGGGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHGRWLR*SGRALP
Trigger: GGGCAGGGCCCTGCCGCTCCACCGCAGCCATCTTCC...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGGGGAGAGACCCTGTaGGGAAGATGGCTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAWGETL*GRWLRW
Trigger: CCACCGCAGCCATCTTCCTCACAGGGTCTCTCCCCA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCTAGGGGTCCCCCTATaGTGCCCTCAGAAGCCCAAG +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHLGVPL*CPQKPK
Trigger: CTTGGGCTTCTGAGGGCATCATAGGGGGACCCCTAG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACCCCCTCTGGGAGAATaGCCACCAGGAGCTGCGAAG +
Preference number: 2 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAPPLGE*PPGAAK
Trigger: CTTCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATACCCTCGGGGGTCTTTaGCTCTCCCCAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHTLGGL*LSPGPV
Trigger: CACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGT...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAATGGCCACCAGGAGCTaGGAAGGAGGTGGTCACGCT +
Preference number: 2 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAMATRS*EGGGHA
Trigger: AGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCAT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATTGTGAGGAAGATGGCTaGGGTGGAGCGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHCEEDG*GGAAGP
Trigger: GGGCCCTGCCGCTCCACCGCAGCCATCTTCCTCACA...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CAA 90 bp ATCTCCTCGTACTCCCGCGAGGATGAGTCGCACTGTGCCAGGATCTaGTTCAGGTTACGGCTGGACGCAAACTTCTTCATGGCTCAAGGA +
Preference number: 2 (lower is better)
Translates to: ISSYSREDESHCARI*FRLRLDANFFMAQG
Trigger: TCCTTGAGCCATGAAGAAGTTTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTACGAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATGTCCAGAGCGGCCCCTaGTGGCCACTCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHVQSGP*WPLSNQ
Trigger: CTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGAC...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACACCCAGGGTGCAGGATaGCCTCTGACTTTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHTQGAG*PLTFFG
Trigger: TCCAAAGAAAGTCAGAGGCCATCCTGCACCCTGGGT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCTCAAGCAGGCAACTaGGCCATGGCTTCATTTCTT +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPQAGN*AMASFL
Trigger: AAGAAATGAAGCCATGGCTCAGTTGCCTGCTTGAGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTTTGTGTGGCCGGTATaGGGGACAGACACAAATATC +
Preference number: 2 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHFVWPV*GTDTNI
Trigger: GATATTTGTGTCTGTCCCTCATACCGGCCACACAAA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR TCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCCATACAAAAGGAGGTaGAGCGGAACTGACCCTGTA +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHPYKRR*SGTDPV
Trigger: TACAGGGTCAGTTCCGCTTCACCTCCTTTTGTATGG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHASDFL*KRRQGA
Trigger: AGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGC...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR TCA 72 bp CAGCGCCCGCGCCCAGGCGCGCCTCCAGGCCGGGCTTaGAGCTGGAGCGCACCGTGTCGTAGGCGCGGCCCG +
Preference number: 3 (lower is better)
Translates to: QRPRPGAPPGRA*SWSAPCRRRGP
Trigger: CGGGCCGCGCCTACGACACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGGCGCGCCTGGGCGCGGGCGCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp GTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTaGGGGACCGGGAGGGCGCCTGGGAGGCCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: VRGGRRRDCARV*GTGRAPGRPEL
Trigger: GAGCTCTGGCCTCCCAGGCGCCCTCCCGGTCCCCCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CACTGCTGGGCTTCCCTGAGGCCGGGCTGGGCACCGTaGTGGGCGAGGGGCCCGGGCCAGCGAGTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: HCWASLRPGWAP*WARGPGQRVGW
Trigger: CCACCCCACTCGCTGGCCCGGGCCCCTCGCCCACCACGGTGCCCAGCCCGGCCTCAGGGAAGCCCAGCAGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGGTGGCCACTGCCCCTaGTGGGGCCAGGGTGTGGTC +
Preference number: 3 (lower is better)
Translates to: QPLHPLQRRGLHRARGASGGHCP*WGQGVV
Trigger: GACCACACCCTGGCCCCACAAGGGGCAGTGGCCACC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGCCTCCAGGCCGGGCTaGAAGCTGGAGCGCACCGTG +
Preference number: 3 (lower is better)
Translates to: QPLHPLQRRGLHRARGASASRPG*KLERTV
Trigger: CACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGGC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTaGATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: GGGMPRPSRTGS*IEVLRGKRPSS
Trigger: GCTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GCGACGGCGAGGGGGAGCGACTGCGCGCGCTCACGCTaGGCACCACGAAGCGCACCTCCTTGGGCTCGTGCG +
Preference number: 3 (lower is better)
Translates to: ATARGSDCARSR*APRSAPPWARA
Trigger: CGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCGCAGTCGCTCCCCCTCGCCGTCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp GGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATaGCCCCCACGGACAGGAACACAGTGGAGCGGCGCC +
Preference number: 3 (lower is better)
Translates to: GMADPRRGRCPR*PPRTGTQWSGA
Trigger: GGCGCCGCTCCACTGTGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CGGCGGTGGGGCCGGTCCCCAGGAGGCGCTCGTCGATaGAGCGGGAGGGCTGTAGGGATGGCAGATCCGCGC +
Preference number: 3 (lower is better)
Translates to: RRWGRSPGGARR*SGRAVGMADPR
Trigger: GCGCGGATCTGCCATCCCTACAGCCCTCCCGCTCCATCGACGAGCGCCTCCTGGGGACCGGCCCCACCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp GGCGCTGCGGCTTGGACGGAGCGAAGAGGCTGGCGCTaGAGGCGCCCAGGTTGGCGTAGGGGCTGTCGGGGC +
Preference number: 3 (lower is better)
Translates to: GAAAWTERRGWR*RRPGWRRGCRG
Trigger: GCCCCGACAGCCCCTACGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GCAGGCGGCGCGGCGTGGCCAGGTGCAGGTGCCACTTaGGCTCCACCGCCTGGATCTCCTCGTACTCCCGCG +
Preference number: 3 (lower is better)
Translates to: AGGAAWPGAGAT*APPPGSPRTPA
Trigger: CGCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCGCCGCCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTaGAGGATGATCATGGAGCGCGCGCGCTTCTGCCGC +
Preference number: 3 (lower is better)
Translates to: GRGASPDSGAES*RMIMERARFCR
Trigger: GCGGCAGAAGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp CCCACGTCGAACTTGCTCCAGAGCTGCAGCGGCTTCTaGTGGAAGGGTCGGCGTGGGCCGGGGGCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: PTSNLLQSCSGF*WKGRRGPGAPG
Trigger: CCCCGGCGCCCCCGGCCCACGCCGACCCTTCCAGCAGAAGCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CGCTGCCCTCGATGGCCCCCACGGACAGGAACACAGTaGAGCGGCGCCGCTCCTCCAGCCGCCGGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: RCPRWPPRTGTQ*SGAAPPAAGPW
Trigger: CCAAGGACCGGCGGCTGGAGGAGCGGCGCCGCTCCACTGTGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCAGGTGCAGGTGCCACTaGCGCTCCACCGCCTGGATC +
Preference number: 3 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELRCRCH*RSTAWI
Trigger: GATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCT...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp GGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATaGTCATGGAGCGCGCGCGCTTCTGCCGCTCGGGAT +
Preference number: 3 (lower is better)
Translates to: GRRPTRAPSPAG*SWSARASAARD
Trigger: ATCCCGAGCGGCAGAAGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp TGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTaGTCCGCGGGAAGCGCCCTTCCAGCAGGGACGCCA +
Preference number: 3 (lower is better)
Translates to: CRDPRAPGLASR*SAGSALPAGTP
Trigger: TGGCGTCCCTGCTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GAGTCCTGCAGGATGATCATGGAGCGCGCGCGCTTCTaGCGCTCGGGATACGGCAGCGGGCCGAGGGCCGCG +
Preference number: 3 (lower is better)
Translates to: ESCRMIMERARF*RSGYGSGPRAA
Trigger: CGCGGCCCTCGGCCCGCTGCCGTATCCCGAGCGGCAGAAGCGCGCGCGCTCCATGATCATCCTGCAGGACTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTaGTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTC +
Preference number: 3 (lower is better)
Translates to: AAEASPAEAAWC*WAMSSLSEDCF
Trigger: GAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp CCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATaGGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGT +
Preference number: 3 (lower is better)
Translates to: PARQRRRGAAGP*ARCPRTASAAG
Trigger: ACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp TCCAGCAGCAGGCGGCGCGGCGTGGCCAGGTGCAGGTaGCACTTGCGCTCCACCGCCTGGATCTCCTCGTAC +
Preference number: 3 (lower is better)
Translates to: SSSRRRGVARCR*HLRSTAWISSY
Trigger: GTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCGCCGCCTGCTGCTGGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp AGGGCTGTAGGGATGGCAGATCCGCGCCGGGGGCGCTaGCCTCGATGGCCCCCACGGACAGGAACACAGTGG +
Preference number: 3 (lower is better)
Translates to: RAVGMADPRRGR*PRWPPRTGTQW
Trigger: CCACTGTGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCTACAGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CGCCCCTCCCACCACGAGCAGCACCTGAAGGGTCGGTaGGGCACACTAGAGCTCAGCGAGGCGAGGGGCCGA +
Preference number: 3 (lower is better)
Translates to: RPSHHEQHLKGR*GTLELSEARGR
Trigger: TCGGCCCCTCGCCTCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 72 bp GCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTaGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: AEASPAEAAWCC*AMSSLSEDCFS
Trigger: GCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp CACGGTGCCGGCTGGCTCTGGCCTGAGCACCCACCCTaGAGGCTTCGAGGGCTAAGCAAGGGGGCACCAGAG +
Preference number: 3 (lower is better)
Translates to: HGAGWLWPEHPP*RLRGLSKGAPE
Trigger: CTCTGGTGCCCCCTTGCTTAGCCCTCGAAGCCTGCAGGGTGGGTGCTCAGGCCAGAGCCAGCCGGCACCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp ACCCCCAGAATCAGGGCCTCAGGAGACGATCAAGGGTaGTGGCGGGGGTCACGGTGCCGGCTGGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: TPRIRASGDDQG*WRGSRCRLALA
Trigger: GGCCAGAGCCAGCCGGCACCGTGACCCCCGCCAGCACCCTTGATCGTCTCCTGAGGCCCTGATTCTGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp GACGGTGGCGGCTCTGGAGTCTGCGTCTGCGATGTCTaGCCGCAGCGTTGGCTCTGCGGCGGCTGCCAGCAT +
Preference number: 3 (lower is better)
Translates to: DGGGSGVCVCDV*PQRWLCGGCQH
Trigger: ATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATCACTGTGCCAGGATCTaGTTCAGGTTACGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDHCARI*FRLRLD
Trigger: GTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTG...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp CCTCTGTTTGACGGTGGCGGCTCTGGAGTCTGCGTCTaGGATGTCTGGCCGCAGCGTTGGCTCTGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: PLFDGGGSGVCV*DVWPQRWLCGG
Trigger: GCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp ACCTGCAGCTGCTTCACCAGGGGGCTCTTGCGGCGCTaGGGCTTGGACGGAGCGAAGAGGCTGGCGCTGAAG +
Preference number: 3 (lower is better)
Translates to: TCSCFTRGLLRR*GLDGAKRLALK
Trigger: CTTCAGCGCCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAAGCAGCTGCAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTaGTTCAGCAGCGGGTCCCTGAAGGTCACCGGCCCC +
Preference number: 3 (lower is better)
Translates to: WCCWAMSSLSED*FSSGSLKVTGP
Trigger: GGGGCCGGTGACCTTCAGGGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CTCCACGGCCCCGCGCTAGTCCAGAGCGGCCCCTGGTaGCCACTCAGTAATCAGGCACACACACGGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LHGPALVQSGPW*PLSNQAHTRLP
Trigger: TGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGACTAGCGCGGGGCCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 72 bp GCCCGACCATGGGGGATCGACACCGAGCTGCTGCGATaGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: ARPWGIDTELLR*ATSWQGPAGCP
Trigger: TGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp TGGGCTCCTGCCCGTTGCTGGTGGCGTGCACAACGATaGGGCCAGCTGGCCGCTGCAGGGATGTGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: WAPARCWWRAQR*GQLAAAGMCPG
Trigger: TCCTGGACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp AGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATaGACACGGTGCACGCCTCCACGGCCCCGCGCTAGT +
Preference number: 3 (lower is better)
Translates to: RRQGALTGTPHA*TRCTPPRPRAS
Trigger: ACTAGCGCGGGGCCGTGGAGGCGTGCACCGTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR GCA 72 bp GTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCATGCTaGCTCATCTGCACTTCCTCCACGCAGTCGGCCGGG +
Preference number: 3 (lower is better)
Translates to: VRSSRVSGRVSC*LICTSSTQSAG
Trigger: CCCGGCCGACTGCGTGGAGGAAGTGCAGATGAGGCAGCATGACACACGGCCTGAAACGCGGGAGGACCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR GCA 72 bp GGTGGGCCTCTGTTTGACGGTGGCGGCTCTGGAGTCTaGGTCTGCGATGTCTGGCCGCAGCGTTGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: GGPLFDGGGSGV*VCDVWPQRWLC
Trigger: GCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGGCCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp GTGGCCAGGTGCAGGTGCCACTTGCGCTCCACCGCCTaGATCTCCTCGTACTCCCGCGAGGATGAGTCGCAC +
Preference number: 3 (lower is better)
Translates to: VARCRCHLRSTA*ISSYSREDESH
Trigger: GTGCGACTCATCCTCGCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGAAGAAGAGGGAGGCCTaGGACCTCCTGTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRKKREA*DLLSSS
Trigger: GCTGCTGGACAGGAGGTCCAAGGCCTCCCTCTTCTT...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp CCGAGAGCTCGGGGTCATCGTGCTGTGGCCAGTGGGTaGGGCCACGTGATGCACCAGCTGGGCTGTTTCCAC +
Preference number: 3 (lower is better)
Translates to: PRARGHRAVASG*GHVMHQLGCFH
Trigger: GTGGAAACAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR GCA 72 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTaGGGGATGGAGAGGCTGGACGACTTGAGGATGGTG +
Preference number: 3 (lower is better)
Translates to: TLRTTKRTSLGS*GMERLDDLRMV
Trigger: CACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp TCTGGAGTCTGCGTCTGCGATGTCTGGCCGCAGCGTTaGCTCTGCGGCGGCTGCCAGCATCTCGTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: SGVCVCDVWPQR*LCGGCQHLVQL
Trigger: AAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CCCGTTGCTGGTGGCGTGCACAACGATGAGGCCAGCTaGCCGCTGCAGGGATGTGTCCAGGACGCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: PVAGGVHNDEAS*PLQGCVQDAED
Trigger: ATCCTCAGCGTCCTGGACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp GGCCAGCAGGACCCCGTTGGCAAACTCTTCAGGGGGTaGCACCAACCCAATTCGGGCCAGCTCCTCCCTGGT +
Preference number: 3 (lower is better)
Translates to: GQQDPVGKLFRG*HQPNSGQLLPG
Trigger: ACCAGGGAGGAGCTGGCCCGAATTGGGTTGGTGCCACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CTGGACACCGTGGAGATGGTGCTTGTGGTCTCCAGGTaGGGGTCGCTGGAGCTGCGTGTGTCAGCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: LDTVEMVLVVSR*GSLELRVSASS
Trigger: GGAGGAGGCTGACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp TTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCATaGTGCCTCATCTGCACTTCCTCCACGCAGTCGGCC +
Preference number: 3 (lower is better)
Translates to: FVRSSRVSGRVS*CLICTSSTQSA
Trigger: GGCCGACTGCGTGGAGGAAGTGCAGATGAGGCAGCATGACACACGGCCTGAAACGCGGGAGGACCGGACGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR CCA 72 bp ACTGCCGAGAGCTCGGGGTCATCGTGCTGTGGCCAGTaGGTGAGGCCACGTGATGCACCAGCTGGGCTGTTT +
Preference number: 3 (lower is better)
Translates to: TAESSGSSCCGQ*VRPRDAPAGLF
Trigger: AAACAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR CCA 72 bp TGGAGATGGTGCTTGTGGTCTCCAGGTGGGGGTCGCTaGAGCTGCGTGTGTCAGCCTCCTCCACCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: WRWCLWSPGGGR*SCVCQPPPPQS
Trigger: ACTCTGGGGTGGAGGAGGCTGACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CGCTCTCCGAGCTCAAGGTGGACATGCTGGACACCGTaGAGATGGTGCTTGTGGTCTCCAGGTGGGGGTCGC +
Preference number: 3 (lower is better)
Translates to: RSPSSRWTCWTP*RWCLWSPGGGR
Trigger: GCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCTCGGAGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CTGCTGCAGGCGGGAGCTGAGCTCACTGATCACAGTTaGTTTGTCGTCTTCAGGCCCAGGGAGCCCCCGGCT +
Preference number: 3 (lower is better)
Translates to: LLQAGAELTDHS*FVVFRPREPPA
Trigger: AGCCGGGGGCTCCCTGGGCCTGAAGACGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp TTGGTAAGCGCGGGTAGGTGCGCGCCTTCTATCTCATaGTCCTCGAAGCGGTCGCGGTGCTCGCCTAGGTGG +
Preference number: 3 (lower is better)
Translates to: LVSAGRCAPSIS*SSKRSRCSPRW
Trigger: CCACCTAGGCGAGCACCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGCGCACCTACCCGCGCTTACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp CAGGACGCTGAGGATCATGGACTTCTTGTCCTCGGGTaGCTTCCGCTCCTCCCGGGGGACCTTCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: QDAEDHGLLVLG*LPLLPGDLLCL
Trigger: GAGGCAGAGAAGGTCCCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCTCAGCGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp GGCCAGCTGGCCGCTGCAGGGATGTGTCCAGGACGCTaGGGATCATGGACTTCTTGTCCTCGGGTGACTTCC +
Preference number: 3 (lower is better)
Translates to: GQLAAAGMCPGR*GSWTSCPRVTS
Trigger: GGAAGTCACCCGAGGACAAGAAGTCCATGATCCTCAGCGTCCTGGACACATCCCTGCAGCGGCCAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp GGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATaGAACATTCCTGGCCCGGGCGCCGTCGTAAGGGGC +
Preference number: 3 (lower is better)
Translates to: GESPSNSKQDDS*NIPGPGAVVRG
Trigger: GCCCCTTACGACGGCGCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
3UTR GCA 72 bp TGCGATGTCTGGCCGCAGCGTTGGCTCTGCGGCGGCTaGCAGCATCTCGTCCAGCTTCTCCCCTTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: CDVWPQRWLCGG*QHLVQLLPFSS
Trigger: AGAAGAAAAGGGGAGAAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp AGCTCAAGGTGGACATGCTGGACACCGTGGAGATGGTaGTTGTGGTCTCCAGGTGGGGGTCGCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: SSRWTCWTPWRW*LWSPGGGRWSC
Trigger: GCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp AGGTGGACATGCTGGACACCGTGGAGATGGTGCTTGTaGTCTCCAGGTGGGGGTCGCTGGAGCTGCGTGTGT +
Preference number: 3 (lower is better)
Translates to: RWTCWTPWRWCL*SPGGGRWSCVC
Trigger: ACACACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR GCA 72 bp AGCTCCACGAAGTCGTCCTTGGTAAGCGCGGGTAGGTaGGCGCCTTCTATCTCATGGTCCTCGAAGCGGTCG +
Preference number: 3 (lower is better)
Translates to: SSTKSSLVSAGR*APSISWSSKRS
Trigger: CGACCGCTTCGAGGACCATGAGATAGAAGGCGCGCACCTACCCGCGCTTACCAAGGACGACTTCGTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAAAGCTAGCCCCCTCCTaGGGGAGAGACCCTGTGAGG +
Preference number: 3 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRKLAPS*GRDPVR
Trigger: CCTCACAGGGTCTCTCCCCAAGGAGGGGGCTAGCTT...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR TCA 72 bp CTCCACCGCCTGGATCTCCTCGTACTCCCGCGAGGATaGGTCGCACTGTGCCAGGATCTTGTTCAGGTTACG +
Preference number: 3 (lower is better)
Translates to: LHRLDLLVLPRG*VALCQDLVQVT
Trigger: CGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTACGAGGAGATCCAGGCGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp AAGTGTGTCCGTCAGCGAAGGAGGTGTGGGTGTCAGTaGGTTCCCCGCTCTCCGAGCTCAAGGTGGACATGC +
Preference number: 3 (lower is better)
Translates to: KCVRQRRRCGCQ*VPRSPSSRWTC
Trigger: GCATGTCCACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGACGGACACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CCA 72 bp CTGGACCCAGGGTGCAGGATGGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCTCTCACAGGTACACCC +
Preference number: 3 (lower is better)
Translates to: LDPGCRMASDFL*KRRQGALTGTP
Trigger: GGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGCCATCCTGCACCCTGGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR-3UTR CAA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGTACGGACAGAGATATTaGTTCCTTTTCTCGTTCCAA +
Preference number: 3 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRYGQRY*FLFSFQ
Trigger: TTGGAACGAGAAAAGGAACAAATATCTCTGTCCGTA...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCACCCTCGGGGGTCTTaGACTCTCCCCAGGGCCTGT +
Preference number: 3 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHHPRGS*TLPRAC
Trigger: ACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 72 bp TCGAGTAGAAAAGTGTGTCCGTCAGCGAAGGAGGTGTaGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAG +
Preference number: 3 (lower is better)
Translates to: SSRKVCPSAKEV*VSVSSPLSELK
Trigger: CTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGACGGACACACTTTTCTACTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR TCA 72 bp ATGTGGTCCAGGCTGAGGAGGTTTGTGTGGCCGGTATaGGGGACAGACACAAATATCCCCTCAAGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: MWSRLRRFVWPV*GTDTNIPSSRQ
Trigger: TTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCATACCGGCCACACAAACCTCCTCAGCCTGGACCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CCA 72 bp GCATCTCGTCCAGCTTCTCCCCTTTTCTTCTCCGAATaGAGGCAAGTTCCTCGAGCTCAGCTGTCATGGACT +
Preference number: 3 (lower is better)
Translates to: ASRPASPLFFSE*RQVPRAQLSWT
Trigger: AGTCCATGACAGCTGAGCTCGAGGAACTTGCCTCCATTCGGAGAAGAAAAGGGGAGAAGCTGGACGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCTCTGCCACAGCCGCTaGCTGCATGGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRLCHSR*LHGGRG
Trigger: GCCCCGGCCCCCATGCAGTCAGCGGCTGTGGCAGAG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCCGGGCCCCCGGGGCTaGGCTGCGCTGAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRPGPRG*AALKWS
Trigger: GCTCCATTTCAGCGCAGCGCAGCCCCGGGGGCCCGG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGGTGGCCCACGCGCGTaGCGCCCAGCTCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRGGPRA*RPAPRS
Trigger: ACTTCGTGGAGCTGGGCGTCACGCGCGTGGGCCACC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGAGCGCGCGCGCTTCTaGCGCTCGGGATACGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRERARF*RSGYGS
Trigger: GCTGCCGTATCCCGAGCGGCAGAAGCGCGCGCGCTC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGGGCCAACTCCGGGGTaGCCGGGCGCTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASGPTPG*PGAPLR
Trigger: CCGAAGAGGAGCGCCCGGGCACCCCGGAGTTGGCCC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCCAAGGTGGGGGCGCTaGCTCCAAGGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRPRWGR*LQGALG
Trigger: CCCAAGGGCCCCTTGGAGGCAGCGCCCCCACCTTGG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGGGATGCCAAGCCACTaGGGCCAGCCAGTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRGMPSH*GQPVAA
Trigger: GGCGGCGACTGGCTGGCCCCAGTGGCTTGGCATCCC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGACCGGGAGGGCGCCTaGGAGGCCAGAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRDREGA*EARARS
Trigger: AGAGCGAGCTCTGGCCTCCCAGGCGCCCTCCCGGTC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGACTGTGCACGGGTGTaGGGGACCGGGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRDCARV*GTGRAP
Trigger: AGGCGCCCTCCCGGTCCCCCACACCCGTGCACAGTC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTCGGCTGGCTCTGGCCTaGGCACCCACCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASRLALA*APTLQA
Trigger: AGCCTGCAGGGTGGGTGCTCAGGCCAGAGCCAGCCG...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCAGCTGCCGTCCAGCTaGCTGAGCGCGCGCTCGATG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRQLPSS*LSARSM
Trigger: CATCGAGCGCGCGCTCAGGCAGCTGGACGGCAGCTG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGTCTGGCCGCAGCGTTaGCTCTGCGGCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASVWPQR*LCGGCQ
Trigger: CTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGAC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGGAGGCGCTCGTCGATaGAGCGGGAGGGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRGGARR*SGRAVG
Trigger: CCCTACAGCCCTCCCGCTCCATCGACGAGCGCCTCC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGACCGGGAGGGCGCCTaGGAGGCCAGAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASDREGA*EARARS
Trigger: AGAGCGAGCTCTGGCCTCCCAGGCGCCCTCCCGGTC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATTCTGTGCCCAGGGAGTaGGGCCGGTGGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDSVPRE*GRWARA
Trigger: CGCCCTGGCCCACCGGCCCCACTCCCTGGGCACAGA...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGACGATCAAGGGTGCTaGCGGGGGTCACGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRDDQGC*RGSRCR
Trigger: CCGGCACCGTGACCCCCGCCAGCACCCTTGATCGTC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
3UTR CAA 72 bp CGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTaGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGRDAATLAHRV*HRGAPREAPFQ
Trigger: CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCCGAGTCCTGCAGGATaGTCATGGAGCGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRPSPAG*SWSARA
Trigger: AGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATTCGGCGTCGGGACTGTaGACGGGTGTGGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDSASGL*TGVGDR
Trigger: CCGGTCCCCCACACCCGTGCACAGTCCCGACGCCGA...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGCCGGGCCCCCGGGGCTaGGCTGCGCTGAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWPGPRG*AALKWS
Trigger: GCTCCATTTCAGCGCAGCGCAGCCCCGGGGGCCCGG...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCAGCTGCAGCGGCTTCTaGTGGAAGGGTCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRSCSGF*WKGRRG
Trigger: CCCACGCCGACCCTTCCAGCAGAAGCCGCTGCAGCT...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTCAGCTGCCGTCCAGCTaGCTGAGCGCGCGCTCGATG +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASQLPSS*LSARSM
Trigger: CATCGAGCGCGCGCTCAGGCAGCTGGACGGCAGCTG...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCTGTGAGGAAGATGGCTaGGGTGGAGCGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRCEEDG*GGAAGP
Trigger: GGGCCCTGCCGCTCCACCGCAGCCATCTTCCTCACA...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGGGCGCTGCCCTCGATaGCCCCCACGGACAGGAACA +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASGRCPR*PPRTGT
Trigger: TGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCGACTGTGCACGGGTGTaGGGGACCGGGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLDCARV*GTGRAP
Trigger: AGGCGCCCTCCCGGTCCCCCACACCCGTGCACAGTC...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCAGCCGCTGACTGCATaGGGGCCGGGGCCAACTCCG +
Preference number: 4 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLQPLTA*GPGPTP
Trigger: CGGAGTTGGCCCCGGCCCCCATGCAGTCAGCGGCTG...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTTGCAGCGGCTTCTGCTaGAAGGGTCGGCGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASCSGFC*KGRRGP
Trigger: CGGCCCACGCCGACCCTTCCAGCAGAAGCCGCTGCA...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCGGTGCCGGCTGGCTCTaGCCTGAGCACCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLGAGWL*PEHPPC
Trigger: GCAGGGTGGGTGCTCAGGCCAGAGCCAGCCGGCACC...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGTTGATATCGCTGGCTaGGCGCTGCAGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRVDIAG*ALQRPR
Trigger: CCTCGGCCTCTGCAGCGCTCAGCCAGCGATATCAAC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGACTGCTGGGCTTCCCTaGGGCCGGGCTGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: PQARAADQRLQGRHRGGQTAGLP*GRAGHR
Trigger: ACGGTGCCCAGCCCGGCCTCAGGGAAGCCCAGCAGT...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCAGGGTCAGTGTGGTaGTGGGGGCCCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELAGSVW*WGPSWG
Trigger: CCCCCAAGAGGGCCCCCAGCACCACACTGACCCTGC...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCTCGCTGTCCGAGGACTaGTTCAGCAGCGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRSLSED*FSSGSL
Trigger: CAGGGACCCGCTGCTGAAGCAGTCCTCGGACAGCGA...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATGGCCCCCACGGACAGGGAGGCGGCGTGGTGCTaGTGGGCCATGAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RDGRSAPGALPSMAPTDREAAWC*WAMSSL
Trigger: CAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTC...CCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGGGCCAGCGAGTGGGGTaGCCAGCAGGACCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PQARAADQRLQGRHRGGQGQRVG*PAGPRW
Trigger: CCAACGGGGTCCTGCTGGCCACCCCACTCGCTGGCC...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCGAAGCGCACCTCCTTaGGCTCGTGCGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRRSAPP*ARAGWR
Trigger: TCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGGCCGGCAAAGCCTCCTaGGCCCAGGCTGTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWAGKAS*AQAVPR
Trigger: ACGCGGCACAGCCTGGGCCCAGGAGGCTTTGCCGGC...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCTTGCGCTCCACCGCCTaGATCTCCTCGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRLRSTA*ISSYSR
Trigger: GCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAA...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCGGTGGCCCACGCGCGTaGCGCCCAGCTCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGGGPRA*RPAPRS
Trigger: ACTTCGTGGAGCTGGGCGTCACGCGCGTGGGCCACC...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTGGGTCCAGGAGAAGCTaGTGGCTGTGCCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASGSRRS*WLCLPL
Trigger: AAGGGGGAGGCACAGCCAGCAGCTTCTCCTGGACCC...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCCGTTGCTGGTGGCGTaGACAACGATGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRPLLVA*TTMRPA
Trigger: AGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATGGCCCCCACGGACAGGGCTGCCGCATTCCGCTaGCGTGTGGCACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: RDGRSAPGALPSMAPTDRAAAFR*RVAQCT
Trigger: CGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGC...CCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTCGATGGGCGACTTCTTaGCAGGGTCCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASRWATS*QGPAGC
Trigger: GCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCG...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCACCGAGCTGCTGCGATaGGCGACTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRTELLR*ATSWQG
Trigger: ACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGT...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGCGGGGTAGCGGCCACTaGGCCTCACCGAGTACGAGG +
Preference number: 4 (lower is better)
Translates to: PQARAADQRLQGRHRGGQRGSGH*ASPSTR
Trigger: CCTCGTACTCGGTGAGGCCCAGTGGCCGCTACCCCG...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGGGGCCACTAGGGCCCTaGCCAACCCCAGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQARAADQRLQGRHRGGQGPLGP*PTPDQL
Trigger: CAGCTGGTCTGGGGTTGGCCAGGGCCCTAGTGGCCC...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATCTCAGAAGCCCAAGGTaGGGGCGCTGCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDLRSPR*GRCLQG
Trigger: CCCTTGGAGGCAGCGCCCCCACCTTGGGCTTCTGAG...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCCTCCAGGCAGCTGCTaGCGGTGTAGGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLPPGSC*RCREGG
Trigger: CCCTCCTTCCCTACACCGCCAGCAGCTGCCTGGAGG...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCCGAAGAGGCTGGCGCTaGAGGCGCCCAGGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGRRGWR*RRPGWR
Trigger: ACGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCG...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCGAAGAGGCTGGCGCTaGAGGCGCCCAGGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLRRGWR*RRPGWR
Trigger: ACGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCG...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGCCGGGAACCAGCCCGTaGGGCCTTTCACGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PQARAADQRLQGRHRGGQPGTSP*GLSRFP
Trigger: AGGGAACCGTGAAAGGCCGCACGGGCTGGTTCCCGG...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCTCGATGGGGGTCTCTaGTTTGGCTCCCCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLLDGGL*FGSPEH
Trigger: GTGCTCCGGGGAGCCAAAGCAGAGACCCCCATCGAG...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCGGGCTCTTGCGGCGCTaGGGCTTGGACGGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGGLLRR*GLDGAK
Trigger: CTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCC...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCACACCGTGGAGATGGTaGTTGTGGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRTPWRW*LWSPGG
Trigger: CCCACCTGGAGACCACAAGCACCATCTCCACGGTGT...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGGCAGAGGCGGCGTGGTaGTGCTGGGCCATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLAEAAW*CWAMSS
Trigger: CGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGC...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATCGCCCACGTCGAACTTaGTCCAGAGCTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDRPRRT*SRAAAA
Trigger: AGCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCG...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGCACGCATGCACACGGTaGACGCCTCCACGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWHACTR*TPPRPR
Trigger: GCGGGGCCGTGGAGGCGTGCACCGTGTGCATGCGTG...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp AGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATGGCCCCCACGGACAGGGGTACACCCCACGCATaGACACGGTGCACGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RDGRSAPGALPSMAPTDRGTPHA*TRCTPP
Trigger: TGGAGGCGTGCACCGTGTGCATGCGTGGGGTGTACC...CCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTAAGCGGCAGGCCTGGTaGATCTCCTGCCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASKRQAW*ISCQPF
Trigger: GAATGGCTGGCAGGAGATCCACCAGGCCTGCCGCTT...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCTCTCCGAGCTCAAGGTaGACATGCTGGACACCGTGG +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRSPSSR*TCWTPW
Trigger: CCACGGTGTCCAGCATGTCCACCTTGAGCTCGGAGA...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGGCCCAGGCCACCAACTaGTTCCTCCCCCAGGGAACG +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWAQATN*FLPQGT
Trigger: CGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGC...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTTGCGCTGCGCTGAAATaGAGCTCAGCTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASCAALK*SSAHRG
Trigger: GCCTCGGTGAGCTGAGCTCCATTTCAGCGCAGCGCA...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCCGGTGCTCGCCTAGGTaGATGCTCTCCAGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELRCSPR*MLSSQS
Trigger: CGACTGGCTGGAGAGCATCCACCTAGGCGAGCACCG...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGGGCGGGAGTGGGGGTaGGGCGTCAGCTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLGREWG*GVSCRP
Trigger: TGGACGGCAGCTGACGCCCCACCCCCACTCCCGCCC...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTACCTCACAGTTGCTATaGCAACCCCGGCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPLHPLQRRGLHRARGASTSQLL*QPRPPG
Trigger: GCCTGGAGGCCGGGGTTGCCATAGCAACTGTGAGGT...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 72 bp AGCTGCTTCACCAGGGGGCTCTTGCGGCGCTGCGGCTaGGACGGAGCGAAGAGGCTGGCGCTGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SCFTRGLLRRCG*DGAKRLALKAP
Trigger: GGGCGCCTTCAGCGCCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAAGCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCCCCCAGGGCCTGTGGTaGACTGACTCTAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGPQGLW*TDSRGP
Trigger: GGGACCCCTAGAGTCAGTTCACCACAGGCCCTGGGG...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGCCTCATCCAGGAACTTaGCGGCGCGGCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRPHPGT*RRGPGR
Trigger: CCTCCCGGGGCCGCGCCGGCAAGTTCCTGGATGAGG...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATGTGTCCTTGTTCAGCTaGTGCAGGCGGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDVSLFS*CRRELS
Trigger: GCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACAC...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCGCAGGGAGGCTTCTCTaGTGTAGTTGCCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRAGRLL*CSCPRA
Trigger: TGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGC...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGAGGCGGTTGCCACCCTaGCGAATCAGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWRRLPP*RIRATT
Trigger: GGTGGTGGCTCTGATTCGCCAGGGTGGCAACCGCCT...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGCAGAGGCCAGCCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCCACAGGAATCCAGGCTaGGCTCCGTGGGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GGRGQPGRGGVVLLGHELHRNPG*APWGES
Trigger: GCTTTCTCCCCACGGAGCCCAGCCTGGATTCCTGTG...GAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGGCTGGCCTCTGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCACCTGAAGGGTCGGTaGGGCACACTAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLHLKGR*GTLELS
Trigger: GCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTG...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GCCCGTGCGGCCTTTCACGGTTCCCTCCCAGAAACCGCCCTCCCCAATGCTGAGGCGCCTTCACGGCGATaGACTTGCGGCCGGGGACGG +
Preference number: 4 (lower is better)
Translates to: ARAAFHGSLPETALPNAEAPSRR*TCGRGR
Trigger: CCGTCCCCGGCCGCAAGTTCATCGCCGTGAAGGCGC...CTCAGCATTGGGGAGGGCGGTTTCTGGGAGGGAACCGTGAAAGGCCGCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR TCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCCCCGTTCACCTCGATaGGGAAGTCTCCCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLPRSPR*GSLPCA
Trigger: TGCGCACGGGAGACTTCCTCATCGAGGTGAACGGGG...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCTCTGCCACAGCCGCTaGCTGCATGGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHLCHSR*LHGGRG
Trigger: GCCCCGGCCCCCATGCAGTCAGCGGCTGTGGCAGAG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGGTACTCCCGCGAGGATaGGTCGCACTGTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWVLPRG*VALCQD
Trigger: ATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTAC...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCTGGCTCTGCGGCGGCTaGCAGCATCTCGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGWLCGG*QHLVQL
Trigger: AAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCA...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCGGTCTTGCATCGAGGTaGTCCGCGGGAAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGGLASR*SAGSAL
Trigger: AAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACC...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCTCGCGCACCGGGTCTTaGATCGAGGTGCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSSRTGS*IEVLRG
Trigger: CCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGA...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGGCCAACTCCGGGGTaGCCGGGCGCTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGPTPG*PGAPLR
Trigger: CCGAAGAGGAGCGCCCGGGCACCCCGGAGTTGGCCC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCTGCGCGCGCTCACGCTaGGCACCACGAAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSCARSR*APRSAP
Trigger: AGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCGCA...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCCGCCCACGTCGAACTTaGTCCAGAGCTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGRPRRT*SRAAAA
Trigger: AGCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCG...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGCTGCAGGTCCGGGATaGCGACGCGCACGACCACGG +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRAAGPG*RRARPR
Trigger: CCGTGGTCGTGCGCGTCGGCATCCCGGACCTGCAGC...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGGGAGACGATCAAGGGTaGTGGCGGGGGTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWGDDQG*WRGSRC
Trigger: GCACCGTGACCCCCGCCAGCACCCTTGATCGTCTCC...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGTGGCCAGGTGCAGGTaGCACTTGCGCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLVARCR*HLRSTA
Trigger: GGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCAC...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp AGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATGGCCCCCACGGACAGGCGTCAACCTCACAGTTaGTATGGCAACCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RDGRSAPGALPSMAPTDRRQPHS*YGNPGL
Trigger: GAGGCCGGGGTTGCCATAGCAACTGTGAGGTTGACG...CCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGCCTTTAGCAGGTCCGTaGCGTTGTCCAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWPLAGP*RCPAGL
Trigger: CAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGG...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCCCAGGCTGGGCTCCGTaGGGAGAAAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSPGWAP*GESRGS
Trigger: GCTTCCCCGGCTTTCTCCCCACGGAGCCCAGCCTGG...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGGCGGGAGTGGGGGTaGGGCGTCAGCTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGREWG*GVSCRP
Trigger: TGGACGGCAGCTGACGCCCCACCCCCACTCCCGCCC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCCCCCCTCTGGGAGAATaGCCACCAGGAGCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGPPLGE*PPGAAK
Trigger: CTTCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGG...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGGTCCAGAGCGGCCCCTaGTGGCCACTCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWVQSGP*WPLSNQ
Trigger: CTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGAC...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGCCACGGGCCTGGGCTaGGCCTGGCCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNATGLG*AWPAKP
Trigger: AGGCTTTGCCGGCCAGGCCCAGCCCAGGCCCGTGGC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGGGCCACTGCCCCTTGTaGGGCCAGGGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRGHCPL*GQGVVS
Trigger: GCTGACCACACCCTGGCCCCACAAGGGGCAGTGGCC...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 72 bp CGCGCGCTCACGCTGCGCACCACGAAGCGCACCTCCTaGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTG +
Preference number: 4 (lower is better)
Translates to: RALTLRTTKRTS*GSCGMERLDDL
Trigger: CAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGCGCCTTCACGGCGATaGACTTGCGGCCGGGGACGG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRAPSRR*TCGRGR
Trigger: CCGTCCCCGGCCGCAAGTTCATCGCCGTGAAGGCGC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGCGCCTTCACGGCGATaGACTTGCGGCCGGGGACGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHAPSRR*TCGRGR
Trigger: CCGTCCCCGGCCGCAAGTTCATCGCCGTGAAGGCGC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGGTGGCCCACGCGCGTaGCGCCCAGCTCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSGGPRA*RPAPRS
Trigger: ACTTCGTGGAGCTGGGCGTCACGCGCGTGGGCCACC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGACCACGAGCAGCACCTaGAGGGTCGGTGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLTTSST*RVGGAH
Trigger: GTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGT...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCCTCATCCAGGAACTTaGCGGCGCGGCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHPHPGT*RRGPGR
Trigger: CCTCCCGGGGCCGCGCCGGCAAGTTCCTGGATGAGG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGCAGGGTCGTCAGTGCTaGCGCATTCCGCTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWQGRQC*RIPLAC
Trigger: ACACGCCAGCGGAATGCGGCAGCACTGACGACCCTG...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCTCTGGAGTCTGCGTCTaGGATGTCTGGCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGSGVCV*DVWPQR
Trigger: ACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGA...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGCCACAGCCGCTGACTaGATGGGGGCCGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNATAAD*MGAGAN
Trigger: GTTGGCCCCGGCCCCCATGCAGTCAGCGGCTGTGGC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCACGCATGCACACGGTaGACGCCTCCACGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNHACTR*TPPRPR
Trigger: GCGGGGCCGTGGAGGCGTGCACCGTGTGCATGCGTG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACGCGGCGTGGCCAGGTaGAGGTGCCACTTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRRGVAR*RCHLRS
Trigger: GGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGAGAGCACGCGCTGCTTaGCGGCCCACACGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQRARAA*RPTRAR
Trigger: CCGCGCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCCCTGAGTCAGGGTCATaGAAGTTGGGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGPESGS*KLGSSP
Trigger: GGGGCTGGACCCCAACTTCCATGACCCTGACTCAGG...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTGGGCCAGGGGTGAGCTaGGGTCCAGGGGTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: AHLLGLVRDGEAGRLEDGGPGVS*GPGVCR
Trigger: CCGGCAAACCCCTGGACCCCAGCTCACCCCTGGCCC...ACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCAGCCGCTGACTGCATaGGGGCCGGGGCCAACTCCG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNQPLTA*GPGPTP
Trigger: CGGAGTTGGCCCCGGCCCCCATGCAGTCAGCGGCTG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGGCCAGCGAGTGGGGTaGCCAGCAGGACCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRGQRVG*PAGPRW
Trigger: CCAACGGGGTCCTGCTGGCCACCCCACTCGCTGGCC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGACCGAGCTGCTGCGATaGGCGACTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLTELLR*ATSWQG
Trigger: ACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGT...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGGCGGGAGTGGGGGTaGGGCGTCAGCTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGREWG*GVSCRP
Trigger: TGGACGGCAGCTGACGCCCCACCCCCACTCCCGCCC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCCCTGACCTCGCATGCTaGACTAGGTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGPDLAC*TRFPLW
Trigger: CCAGAGGGGGAACCTAGTCCAGCATGCGAGGTCAGG...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCGTCCAGAGCGGCCCCTaGTGGCCACTCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGVQSGP*WPLSNQ
Trigger: CTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGAC...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGGGCTGGGTGAGGCTCTaGAAGGACAGGCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLGWVRL*KDRLGK
Trigger: TTTGCCCAGCCTGTCCTTCCAGAGCCTCACCCAGCC...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCCTCCAGGCCGGGCTTaGAGCTGGAGCGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSPPGRA*SWSAPC
Trigger: ACACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGCCGAGTCCTGCAGGATaGTCATGGAGCGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRPSPAG*SWSARA
Trigger: AGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGG...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCAGGCTCGGGCCGCTaGCCAACGGCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQPGSGR*PTASGQ
Trigger: CTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCTCTGCCACAGCCGCTaGCTGCATGGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLLCHSR*LHGGRG
Trigger: GCCCCGGCCCCCATGCAGTCAGCGGCTGTGGCAGAG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCGTGCGGCCTTTCACGGTTCCCTCCCAGAAACCGCCCTCCCCAATGCTGAGCCACAGGAAGCCCCGGTaGCAGAAGCCCTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: PVRPFTVPSQKPPSPMLSHRKPR*QKPFTA
Trigger: GGCCGTGAAGGGCTTCTGTCACCGGGGCTTCCTGTG...GCTCAGCATTGGGGAGGGCGGTTTCTGGGAGGGAACCGTGAAAGGCCGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGCGCAGAGCACGCGCTaGTTGGCGGCCCACACGGGC +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLAQSTR*LAAHTG
Trigger: GCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCTGCGC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCAGAGGCCGAGGGGATaGCAAGCCACTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSQRPRG*QATGAS
Trigger: GCTGGCCCCAGTGGCTTGGCATCCCCTCGGCCTCTG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATCGCTGGCTGAGCGCTaGAGAGGCCGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRSLAER*RGRGDA
Trigger: GGCATCCCCTCGGCCTCTGCAGCGCTCAGCCAGCGA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGTCACCCTGCGGGCTGTaGGCCTTCACGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRSPCGL*AFTAMN
Trigger: GTTCATCGCCGTGAAGGCGCACAGCCCGCAGGGTGA...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGATCTCGCCTTCACCCTaGGGGCTGTGCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRISPSP*GLCAFT
Trigger: CGTGAAGGCGCACAGCCCGCAGGGTGAAGGCGAGAT...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGATCAGAGCCACCACCTaGTTGTGTCCGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWIRATT*LCPTFT
Trigger: GGTGAAGGTCGGACACAAGCAGGTGGTGGCTCTGAT...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGCAGGGTCAGTGTGGTaGTGGGGGCCCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSAGSVW*WGPSWG
Trigger: CCCCCAAGAGGGCCCCCAGCACCACACTGACCCTGC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp ACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGTCTGGAGTCTGCGTCTaGGATGTCTGGCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: TLAHRVLHRGAPREAPFQSGVCV*DVWPQR
Trigger: ACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGA...CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACTCACCAGGGGGCTCTTaGGGCGCTGCGGCTTGGACG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHSPGGS*GAAAWT
Trigger: CGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGA...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACTCACCAGGGGGCTCTTaGGGCGCTGCGGCTTGGACG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNSPGGS*GAAAWT
Trigger: CGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGA...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTCGGCGTCGGGACTGTaGACGGGTGTGGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQSASGL*TGVGDR
Trigger: CCGGTCCCCCACACCCGTGCACAGTCCCGACGCCGA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCCGGGGGACCTTCTCTaGCTCCCTGCGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHPGDLL*LPASRH
Trigger: GTGCCTGCTCGCAGGGAGGCAGAGAAGGTCCCCCGG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGCCGTTGCTGGTGGCGTaGACAACGATGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWPLLVA*TTMRPA
Trigger: AGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGG...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGTGGGCTCCTGCCCGTTaGTGGTGGCGTGCACAACGA +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRWAPAR*WWRAQR
Trigger: TCGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCA...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCAGGGGGTGGCTCACTaGTGGGCTTCCCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNQGVAH*WASLRP
Trigger: CGGCCTCAGGGAAGCCCAGCAGTGAGCCACCCCCTG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCACCCCAGAGTCGGCTaGAGACTCAGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNHPRVG*RLRGRG
Trigger: CCCCCTGCCCCTGAGTCTGCAGCCGACTCTGGGGTG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGAGGCGGCGTGGTGCTaGTGGGCCATGAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNEAAWC*WAMSSL
Trigger: CAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTCCCCCGGGGCTGCGCTaGGCTGAAATGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AHLLGLVRDGEAGRLEDGPPGLR*AEMELS
Trigger: GCTGAGCTCCATTTCAGCGCAGCGCAGCCCCGGGGG...ACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGGAAGAGGAGACAGGGTaGTCTCACAGGTACACCCCA +
Preference number: 4 (lower is better)
Translates to: PQARAADQRLQGRHRGGQEEETG*SHRYTP
Trigger: TGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTC...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGCCTGGGCCCAGGCTGTaGCGCGTCGTCGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVPGPRL*RVVAGR
Trigger: TCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGTGGCGTTGTCCAGCTaGGCTGCGAGGCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRVALSS*AARLRG
Trigger: CCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCAC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGCGCTGGAGCAGCAGCTaGTGGGGGAGGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRRWSSS*WGRLLS
Trigger: GCTGAGAAGCCTCCCCCACCAGCTGCTGCTCCAGCG...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATTACAGACTTGGTCCGTaGAATCCCCTTCCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDYRLGP*NPLPQG
Trigger: TCCTTGCGGAAGGGGATTCCACGGACCAAGTCTGTA...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACTGCGGCGCTGCGGCTTaGACGGAGCGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHCGAAA*TERRGW
Trigger: CCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCA...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTGCGGCGCTGCGGCTTaGACGGAGCGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSCGAAA*TERRGW
Trigger: CCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATGCGGCGCTGCGGCTTaGACGGAGCGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRCGAAA*TERRGW
Trigger: CCAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGGCGCTGCCCTCGATaGCCCCCACGGACAGGAACA +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGRCPR*PPRTGT
Trigger: TGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGAGGCGCTCGTCGATaGAGCGGGAGGGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGGARR*SGRAVG
Trigger: CCCTACAGCCCTCCCGCTCCATCGACGAGCGCCTCC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCCAGGCTGGGCTCCGTaGGGAGAAAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNPGWAP*GESRGS
Trigger: GCTTCCCCGGCTTTCTCCCCACGGAGCCCAGCCTGG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACAGCCGCTGACTGCATaGGGGCCGGGGCCAACTCCG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRQPLTA*GPGPTP
Trigger: CGGAGTTGGCCCCGGCCCCCATGCAGTCAGCGGCTG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGTGGTCTCCTCATCGCTaGACGACAGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLAHRVLHRGAPREAPFQWSPHR*TTAGQV
Trigger: CACCTGCCCAGCTGTCGTCCAGCGATGAGGAGACCA...CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGCCAGCGAGTGGGGTaGCCAGCAGGACCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGQRVG*PAGPRW
Trigger: CCAACGGGGTCCTGCTGGCCACCCCACTCGCTGGCC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCTCCCTGAGGCCGGGCTaGGCACCGTGGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSLRPG*APWWAR
Trigger: CCTCGCCCACCACGGTGCCCAGCCCGGCCTCAGGGA...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGCGGCGTGGTGCTGCTaGGCCATGAGCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSAAWCC*AMSSLS
Trigger: GGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCGGCAGAGGCGGCGTaGTGCTGCTGGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQPAEAA*CCWAMS
Trigger: GCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACGGGGTAGCGGCCACTaGGCCTCACCGAGTACGAGG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRRGSGH*ASPSTR
Trigger: CCTCGTACTCGGTGAGGCCCAGTGGCCGCTACCCCG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATGCAGCGGCTTCTGCTaGAAGGGTCGGCGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRCSGFC*KGRRGP
Trigger: CGGCCCACGCCGACCCTTCCAGCAGAAGCCGCTGCA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACTTCCTGACTGTGCGCTaGGTGGGCTGGGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNFLTVR*VGWAAG
Trigger: ACCGGCCGCCCAGCCCACCCAGCGCACAGTCAGGAA...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGAACCCCGCTCAGGCTaGGTGAGGCTCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLEPRSG*VRLWKD
Trigger: GTCCTTCCAGAGCCTCACCCAGCCTGAGCGGGGTTC...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCTCTGTGCCCAGGGAGTaGGGCCGGTGGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSVPRE*GRWARA
Trigger: CGCCCTGGCCCACCGGCCCCACTCCCTGGGCACAGA...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGTCACGGTGCCGGCTaGCTCTGGCCTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGHGAG*LWPEHP
Trigger: TGGGTGCTCAGGCCAGAGCCAGCCGGCACCGTGACC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCAGAAGAGGGAGGCCTTaGACCTCCTGTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGRRGRP*TSCPAA
Trigger: TGCTGCTGGACAGGAGGTCCAAGGCCTCCCTCTTCT...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
3UTR CAA 72 bp CTCTGGAGTCTGCGTCTGCGATGTCTGGCCGCAGCGTaGGCTCTGCGGCGGCTGCCAGCATCTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LWSLRLRCLAAA*ALRRLPASRPA
Trigger: AGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGCAGGGGGCACTCTCCTaGGTCAGGGTCATGGAAGTT +
Preference number: 4 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWQGALS*VRVMEV
Trigger: AACTTCCATGACCCTGACTCAGGAGAGTGCCCCCTG...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCTTCTTGTCCTCGGGTaGCTTCCGCTCCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSLLVLG*LPLLPG
Trigger: CCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATCCCCAGCGGGGACTTaGGCTTGGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRSPAGT*AWAWEA
Trigger: TGCCTCCCAAGCCCAAGCTCAAGTCCCCGCTGGGGA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGGGCTGCGCTGCGCTaGAATGGAGCTCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGAALR*NGAQLT
Trigger: GGTGAGCTGAGCTCCATTTCAGCGCAGCGCAGCCCC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGGGGCTGCGCTGCGCTaGAATGGAGCTCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRGAALR*NGAQLT
Trigger: GGTGAGCTGAGCTCCATTTCAGCGCAGCGCAGCCCC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATGCCGTCCAGCTGCCTaGGCGCGCGCTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRCRPAA*ARARCS
Trigger: TGAACATCGAGCGCGCGCTCAGGCAGCTGGACGGCA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTGCCGTCCAGCTGCCTaGGCGCGCGCTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSCRPAA*ARARCS
Trigger: TGAACATCGAGCGCGCGCTCAGGCAGCTGGACGGCA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCTGGGGAGAGACCCTGTaGGGAAGATGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSWGETL*GRWLRW
Trigger: CCACCGCAGCCATCTTCCTCACAGGGTCTCTCCCCA...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGGTGCAGGATGGCCTCTaGCTTTCTTTGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWVQDGL*LSLEEE
Trigger: CTCCTCTTCCAAAGAAAGTCAGAGGCCATCCTGCAC...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACCCCAGGGCCTGTGGTaGACTGACTCTAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRPQGLW*TDSRGP
Trigger: GGGACCCCTAGAGTCAGTTCACCACAGGCCCTGGGG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACACCCTCGGGGGTCTTTaGCTCTCCCCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNTLGGL*LSPGPV
Trigger: CACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACACCCTCGGGGGTCTTTaGCTCTCCCCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHTLGGL*LSPGPV
Trigger: CACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGT...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTGTCCAACAGGCGTaGCACCTTGTCCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLLVQQA*HLVRAM
Trigger: CATAGCACGGACAAGGTGGCACGCCTGTTGGACAAG...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACAGCAGGGTCGTCAGTaGTGCCGCATTCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRQQGRQ*CRIPLA
Trigger: CGCCAGCGGAATGCGGCAGCACTGACGACCCTGCTG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GCCGAGAGCTCGGGGTCATCGTGCTGTGGCCAGTGGGTGAGGCCACGTGATGCATCACCCTGCGGGCTGTaGGCCTTCACGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: AESSGSSCCGQWVRPRDASPCGL*AFTAMN
Trigger: GTTCATCGCCGTGAAGGCGCACAGCCCGCAGGGTGA...TGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp AATGCTGAGCACCAGGGGTCACTGCCGAGAGCTCGGGGTCATCGTGCTGTGGCCCCGGGAACCAGCCCGTaGGGCCTTTCACGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NAEHQGSLPRARGHRAVAPGTSP*GLSRFP
Trigger: AGGGAACCGTGAAAGGCCGCACGGGCTGGTTCCCGG...GGCCACAGCACGATGACCCCGAGCTCTCGGCAGTGACCCCTGGTGCTCAGCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGGCGGCTCTGGAGTCTaGGTCTGCGATGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRGGSGV*VCDVWP
Trigger: CGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATCGCGCACCGGGTCTTaGATCGAGGTGCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRSRTGS*IEVLRG
Trigger: CCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGGCTCTTGCGGCGCTaGGGCTTGGACGGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGLLRR*GLDGAK
Trigger: CTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCGGGGGACCTTCTCTaGCTCCCTGCGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQPGDLL*LPASRH
Trigger: GTGCCTGCTCGCAGGGAGGCAGAGAAGGTCCCCCGG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACAGGGGGTGGCTCACTaGTGGGCTTCCCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRQGVAH*WASLRP
Trigger: CGGCCTCAGGGAAGCCCAGCAGTGAGCCACCCCCTG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGTCGCTGTCCGAGGACTaGTTCAGCAGCGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRSLSED*FSSGSL
Trigger: CAGGGACCCGCTGCTGAAGCAGTCCTCGGACAGCGA...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATGCGCGCGCTCACGCTaGGCACCACGAAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRCARSR*APRSAP
Trigger: AGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCGCA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTGCAGCGGCTTCTaGTGGAAGGGTCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNSCSGF*WKGRRG
Trigger: CCCACGCCGACCCTTCCAGCAGAAGCCGCTGCAGCT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCGCAGGGAGGCTTCTCTaGTGTAGTTGCCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGAGRLL*CSCPRA
Trigger: TGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGC...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCGCGGCGTGGCCAGGTaGAGGTGCCACTTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLRGVAR*RCHLRS
Trigger: GGAGCGCAAGTGGCACCTGCACCTGGCCACGCCGCG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGGGGCGTGTCCAGGTTaGGCGGGTACTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSGACPG*AGTPAG
Trigger: TCCTGCAGGAGTACCCGCCCAACCTGGACACGCCCC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGGGCGCTGCCCTCGATaGCCCCCACGGACAGGAACA +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQGRCPR*PPRTGT
Trigger: TGTTCCTGTCCGTGGGGGCCATCGAGGGCAGCGCCC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCCAGGTGGGGGTCGCTaGAGCTGCGTGTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSPGGGR*SCVCQP
Trigger: AGGCTGACACACGCAGCTCCAGCGACCCCCACCTGG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGCCCAGGCCACCAACTaGTTCCTCCCCCAGGGAACG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNAQATN*FLPQGT
Trigger: CGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATCGATGTTCATGCGGTaGCCCACGCGCGTGACGCCC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRSMFMR*PTRVTP
Trigger: GGGCGTCACGCGCGTGGGCCACCGCATGAACATCGA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGCCGGAGATGGAAGACTaGGCAGCTGCAGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRPEMED*AAAVGP
Trigger: TGGTCCCACTGCAGCTGCCCAGTCTTCCATCTCCGG...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGGGCCACTAGGGCCCTaGCCAACCCCAGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQGPLGP*PTPDQL
Trigger: CAGCTGGTCTGGGGTTGGCCAGGGCCCTAGTGGCCC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCCAGAGCGGCCCCTGGTaGCCACTCAGTAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSQSGPW*PLSNQA
Trigger: TGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTG...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTAGTGCCGAAAGAGCCGCTTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCGGGGTCATCGTGCTGTaGCCAGTGGGTGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: VVPKEPLRPVLPRFRPCVGVIVL*PVGEAT
Trigger: CGTGGCCTCACCCACTGGCCACAGCACGATGACCCC...GACACACGGCCTGAAACGCGGGAGGACCGGACGAAGCGGCTCTTTCGGCACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR CAA 72 bp TCGGCGGGTGTGATCCTCCGACTGGTGGGCCTCTGTTaGACGGTGGCGGCTCTGGAGTCTGCGTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: SAGVILRLVGLC*TVAALESASAM
Trigger: CATCGCAGACGCAGACTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAGTCGGAGGATCACACCCGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 72 bp CCCACGCGCGTGACGCCCAGCTCCACGAAGTCGTCCTaGGTAAGCGCGGGTAGGTGCGCGCCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: PTRVTPSSTKSS*VSAGRCAPSIS
Trigger: TGAGATAGAAGGCGCGCACCTACCCGCGCTTACCAAGGACGACTTCGTGGAGCTGGGCGTCACGCGCGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGTTGATATCGCTGGCTaGGCGCTGCAGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNVDIAG*ALQRPR
Trigger: CCTCGGCCTCTGCAGCGCTCAGCCAGCGATATCAAC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCGCCCTCCCCAATGCTaGGCACCTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLRPPQC*APSRPR
Trigger: GCGAGGCCGTGAAGGTGCTCAGCATTGGGGAGGGCG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCGAAGAGGCTGGCGCTaGAGGCGCCCAGGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLRRGWR*RRPGWR
Trigger: ACGCCAACCTGGGCGCCTTCAGCGCCAGCCTCTTCG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATGGCGTGCACAACGATaGGGCCAGCTGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRWRAQR*GQLAAA
Trigger: TGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGTGCTGCTGGGCCATaGGCTCGCTGTCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGAAGP*ARCPRT
Trigger: AGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTGCCGTCCAGCTGCCTaGGCGCGCGCTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQCRPAA*ARARCS
Trigger: TGAACATCGAGCGCGCGCTCAGGCAGCTGGACGGCA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCCCAGGGCCTGTGGTaGACTGACTCTAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQPQGLW*TDSRGP
Trigger: GGGACCCCTAGAGTCAGTTCACCACAGGCCCTGGGG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGACCCTCGGGGGTCTTTaGCTCTCCCCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQTLGGL*LSPGPV
Trigger: CACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp AGGGATGGCAGATCCGCGCCGGGGGCGCTGCCCTCGATGGCCCCCACGGACAGGACAGAAACTTGTGAGTaGCGTGGATGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: RDGRSAPGALPSMAPTDRTETCE*RGWSLV
Trigger: GACTAAGCTCCATCCACGTCACTCACAAGTTTCTGT...CCTGTCCGTGGGGGCCATCGAGGGCAGCGCCCCCGGCGCGGATCTGCCATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CTTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCATGCTGCCTCATCTGCACGCTGTGGCCAGTGGGTaGGGCCACGTGATGCACCAG +
Preference number: 4 (lower is better)
Translates to: LRPVLPRFRPCVMLPHLHAVASG*GHVMHQ
Trigger: CTGGTGCATCACGTGGCCTCACCCACTGGCCACAGC...GTGCAGATGAGGCAGCATGACACACGGCCTGAAACGCGGGAGGACCGGACGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAAGCGCAGAGCACGCGCTaGTTGGCGGCCCACACGGGC +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQAQSTR*LAAHTG
Trigger: GCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCTGCGC...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGGTCCAGGAGAAGCTaGTGGCTGTGCCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGSRRS*WLCLPL
Trigger: AAGGGGGAGGCACAGCCAGCAGCTTCTCCTGGACCC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTCACCCTGCGGGCTGTaGGCCTTCACGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSSPCGL*AFTAMN
Trigger: GTTCATCGCCGTGAAGGCGCACAGCCCGCAGGGTGA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GGTCCTCCCGCGTTTCAGGCCGTGTGTCATGCTGCCTCATCTGCACTTCCTCCAACGGCCTCGCCGCGGTaGAGCGGGATCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GPPAFQAVCHAASSALPPTASPR*SGISPS
Trigger: TGAAGGCGAGATCCCGCTGCACCGCGGCGAGGCCGT...TGGAGGAAGTGCAGATGAGGCAGCATGACACACGGCCTGAAACGCGGGAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGGCGGCTCTGGAGTCTaGGTCTGCGATGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQGGSGV*VCDVWP
Trigger: CGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGAGCGCGCGCGCTTCTaGCGCTCGGGATACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAERARF*RSGYGS
Trigger: GCTGCCGTATCCCGAGCGGCAGAAGCGCGCGCGCTC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTCGGGCGCCGAGTCCTaGAGGATGATCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSSGAES*RMIMER
Trigger: GCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTTCGGGCGCCGAGTCCTaGAGGATGATCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: AHLLGLVRDGEAGRLEDGSGAES*RMIMER
Trigger: GCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGA...ACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCGCCCACGTCGAACTTaGTCCAGAGCTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNRPRRT*SRAAAA
Trigger: AGCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGCTCGCCTAGGTGGATaGTCTCCAGCCAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHARLGG*SPASRP
Trigger: TGGGCGACTGGCTGGAGAGCATCCACCTAGGCGAGC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATGTGAGGAAGATGGCTaGGGTGGAGCGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRCEEDG*GGAAGP
Trigger: GGGCCCTGCCGCTCCACCGCAGCCATCTTCCTCACA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGGTACACCCCACGCATaGACACGGTGCACGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRGTPHA*TRCTPP
Trigger: TGGAGGCGTGCACCGTGTGCATGCGTGGGGTGTACC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGGTGCAGGTGCCACTTaGGCTCCACCGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRGAGAT*APPPGS
Trigger: AGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGAGGGAAGGAGGGCTCTaGCACGCCAGGGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVREGGL*HARGSA
Trigger: CGCAGAGCCCCTGGCGTGGCAGAGCCCTCCTTCCCT...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGGGATGCCAAGCCACTaGGGCCAGCCAGTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAGMPSH*GQPVAA
Trigger: GGCGGCGACTGGCTGGCCCCAGTGGCTTGGCATCCC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGAGCGCAGGGTCAGTGTaGTGCTGGGGGCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQSAGSV*CWGPSW
Trigger: CCAAGAGGGCCCCCAGCACCACACTGACCCTGCGCT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTTGCGTCTGCGATGTCTaGCCGCAGCGTTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AHLLGLVRDGEAGRLEDGCVCDV*PQRWLC
Trigger: GCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCA...ACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACGGACAGGAACACAGTaGAGCGGCGCCGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRRTGTQ*SGAAPP
Trigger: TGGAGGAGCGGCGCCGCTCCACTGTGTTCCTGTCCG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAGGGACCCTCGCTCTaGGTCCCGGGCCTGTACATC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQQGPSL*VPGLYI
Trigger: GATGTACAGGCCCGGGACCCAGAGCGAGGGTCCCTG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGTGGAGATGGTGCTTGTaGTCTCCAGGTGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRWRWCL*SPGGGR
Trigger: GCGACCCCCACCTGGAGACCACAAGCACCATCTCCA...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCGATGGGCGACTTCTTaGCAGGGTCCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSRWATS*QGPAGC
Trigger: GCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACGAAGCGCACCTCCTTaGGCTCGTGCGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRRSAPP*ARAGWR
Trigger: TCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCGGTGCTCGCCTAGGTaGATGCTCTCCAGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHRCSPR*MLSSQS
Trigger: CGACTGGCTGGAGAGCATCCACCTAGGCGAGCACCG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAAGTGCGCTGGGTGGGCTaGGCGGCCGGTGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQVRWVG*AAGEGT
Trigger: AGTGCCCTCACCGGCCGCCCAGCCCACCCAGCGCAC...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACCCCCTCTGGGAGAATaGCCACCAGGAGCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRPPLGE*PPGAAK
Trigger: CTTCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTCCCCTGCCCCGTTGTaGGGTGGCAGTGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQSPAPL*GGSGSE
Trigger: CTCACTGCCACTGCCACCCCACAACGGGGCAGGGGA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGGAAGATGGCTGCGGTaGAGCGGCAGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAGRWLR*SGRALP
Trigger: GGGCAGGGCCCTGCCGCTCCACCGCAGCCATCTTCC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGAACCCCGCTCAGGCTaGGTGAGGCTCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSEPRSG*VRLWKD
Trigger: GTCCTTCCAGAGCCTCACCCAGCCTGAGCGGGGTTC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACTCAGAAGCCCAAGGTaGGGGCGCTGCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRLRSPR*GRCLQG
Trigger: CCCTTGGAGGCAGCGCCCCCACCTTGGGCTTCTGAG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGGTGCCGGCTGGCTCTaGCCTGAGCACCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAGAGWL*PEHPPC
Trigger: GCAGGGTGGGTGCTCAGGCCAGAGCCAGCCGGCACC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCAGAAGAGGGAGGCCTTaGACCTCCTGTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSRRGRP*TSCPAA
Trigger: TGCTGCTGGACAGGAGGTCCAAGGCCTCCCTCTTCT...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 72 bp TGCAGGCGGGAGCTGAGCTCACTGATCACAGTTGGTTaGTCGTCTTCAGGCCCAGGGAGCCCCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CRRELSSLITVG*SSSGPGSPRLS
Trigger: GGAGAGCCGGGGGCTCCCTGGGCCTGAAGACGACAAACCAACTGTGATCAGTGAGCTCAGCTCCCGCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 72 bp CCACCAACTGGTTCCTCCCCCAGGGAACGCGTGTCCTaGTTCAGCTGCTGCAGGCGGGAGCTGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PPTGSSPRERVS*FSCCRRELSSL
Trigger: CAGTGAGCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCTGGGGGAGGAACCAGTTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACAGCGGAGCGGGCTCGTaGGCTCAGGTCCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSGAGS*AQVPGA
Trigger: CGCTCCCGGGACCTGAGCTCACGAGCCCGCTCCGCT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262795.6
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCACAGTGCACGGCAGTaGGCCCATCGCGAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLHSARQ*AHRECG
Trigger: TCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATCGGTGATCCCCAGCTaGGCGTGGTCGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRSVIPS*AWSWRS
Trigger: GCTTCTCCACGACCACGCTCAGCTGGGGATCACCGA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCCTCCAGGCCGGGCTTaGAGCTGGAGCGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAPPGRA*SWSAPC
Trigger: ACACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCCGAGTCCTGCAGGATaGTCATGGAGCGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLPSPAG*SWSARA
Trigger: AGCGCGCGCGCTCCATGATCATCCTGCAGGACTCGG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAAGGTGTGGGTGTCAGTaGGTTCCCCGCTCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRRCGCQ*VPRSPS
Trigger: GCTCGGAGAGCGGGGAACTCACTGACACCCACACCT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGGTGCTGCTGGGCCATaGGCTCGCTGTCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLGAAGP*ARCPRT
Trigger: AGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATGGGGAGAGACCCTGTaGGGAAGATGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRWGETL*GRWLRW
Trigger: CCACCGCAGCCATCTTCCTCACAGGGTCTCTCCCCA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACTAGGGGTCCCCCTATaGTGCCCTCAGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRLGVPL*CPQKPK
Trigger: CTTGGGCTTCTGAGGGCATCATAGGGGGACCCCTAG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCTAGGGGTCCCCCTATaGTGCCCTCAGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNLGVPL*CPQKPK
Trigger: CTTGGGCTTCTGAGGGCATCATAGGGGGACCCCTAG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGTACTCCCGCGAGGATaGGTCGCACTGTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSVLPRG*VALCQD
Trigger: ATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTAC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAGGGTCGTCAGTGCTaGCGCATTCCGCTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQQGRQC*RIPLAC
Trigger: ACACGCCAGCGGAATGCGGCAGCACTGACGACCCTG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGCAGCAGGGTCGTCAGTaGTGCCGCATTCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVQQGRQ*CRIPLA
Trigger: CGCCAGCGGAATGCGGCAGCACTGACGACCCTGCTG...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CGGTCCTCCCGCGTTTCAGGCCGTGTGTCATGCTGCCTCATCTGCACTTCCTCCATCTCGCCTTCACCCTaGGGGCTGTGCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: RSSRVSGRVSCCLICTSSISPSP*GLCAFT
Trigger: CGTGAAGGCGCACAGCCCGCAGGGTGAAGGCGAGAT...GGAGGAAGTGCAGATGAGGCAGCATGACACACGGCCTGAAACGCGGGAGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTACGGCCTCGCCGCGGTaGAGCGGGATCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQATASPR*SGISPS
Trigger: TGAAGGCGAGATCCCGCTGCACCGCGGCGAGGCCGT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTCTGGAGTCTGCGTCTaGGATGTCTGGCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSSGVCV*DVWPQR
Trigger: ACGCTGCGGCCAGACATCGCAGACGCAGACTCCAGA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGGTCTTGCATCGAGGTaGTCCGCGGGAAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQGLASR*SAGSAL
Trigger: AAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCGCGCACCGGGTCTTaGATCGAGGTGCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASRTGS*IEVLRG
Trigger: CCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATGGGCTCCTGCCCGTTaGTGGTGGCGTGCACAACGA +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRWAPAR*WWRAQR
Trigger: TCGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAAGCCACAGCCGCTGACTaGATGGGGGCCGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQATAAD*MGAGAN
Trigger: GTTGGCCCCGGCCCCCATGCAGTCAGCGGCTGTGGC...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCAGGGGGTGGCTCACTaGTGGGCTTCCCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAQGVAH*WASLRP
Trigger: CGGCCTCAGGGAAGCCCAGCAGTGAGCCACCCCCTG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGCAGAGGCGGCGTGGTaGTGCTGGGCCATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAAEAAW*CWAMSS
Trigger: CGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGTGTCCTTGTTCAGCTaGTGCAGGCGGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRVSLFS*CRRELS
Trigger: GCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACAC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGACCTCCTTGGGCTCGTaGGGGATGGAGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQTSLGS*GMERLD
Trigger: GTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATCGAAGCGGTCGCGGTaGTCGCCTAGGTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRSKRSR*SPRWML
Trigger: GAGCATCCACCTAGGCGAGCACCGCGACCGCTTCGA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACATGGCCACCAGGAGCTaGGAAGGAGGTGGTCACGCT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNMATRS*EGGGHA
Trigger: AGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCAT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCACACGGCTCCCACGTaGTCAGACGCACCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSHTAPT*SDAPSF
Trigger: GAAACTGGGTGCGTCTGAGCACGTGGGAGCCGTGTG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGTGTAGTGCCGAAAGAGCCGCTTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTAGCACCAGGGGTCACTaGCGAGAGCTCGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: CVVPKEPLRPVLPRFRPCSTRGH*RELGVI
Trigger: GATGACCCCGAGCTCTCGGCAGTGACCCCTGGTGCT...ACACGGCCTGAAACGCGGGAGGACCGGACGAAGCGGCTCTTTCGGCACTACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCGGCCTCCAGGCAGCTaGTGGCGGTGTAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLRPPGS*WRCREG
Trigger: TCCTTCCCTACACCGCCAGCAGCTGCCTGGAGGCCG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACAGAGCACGCGCTGCTTaGCGGCCCACACGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDRARAA*RPTRAR
Trigger: CCGCGCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCT...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGCGTCCTGGAGGCTGTaGTTGAGGGCGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLASWRL*LRAQST
Trigger: CGTGCTCTGCGCCCTCAACCACAGCCTCCAGGACGC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCCTGAGTCAGGGTCATaGAAGTTGGGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHPESGS*KLGSSP
Trigger: GGGGCTGGACCCCAACTTCCATGACCCTGACTCAGG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAAGCGGCAGGCCTGGTaGATCTCCTGCCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNKRQAW*ISCQPF
Trigger: GAATGGCTGGCAGGAGATCCACCAGGCCTGCCGCTT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTCCAGGAGAAGCTGCTaGCTGTGCCTCCCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSSRRSC*LCLPLQ
Trigger: CTGAAGGGGGAGGCACAGCCAGCAGCTTCTCCTGGA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGGGCTGATCTTGCTTTaGCCGGCCCTGCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRGLILL*PALPAK
Trigger: TTTAGCAGGCAGGGCCGGCCAAAGCAAGATCAGCCC...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAAGGCGGTTGCCACCCTaGCGAATCAGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRRRLPP*RIRATT
Trigger: GGTGGTGGCTCTGATTCGCCAGGGTGGCAACCGCCT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACAACGATGAGGCCAGCTaGCCGCTGCAGGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHNDEAS*PLQGCV
Trigger: GACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTT...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCCAGCAGGACCCCGTTaGCAAACTCTTCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNPAGPR*QTLQGV
Trigger: CACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTCCCTGAGGCCGGGCTaGGCACCGTGGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSLRPG*APWWAR
Trigger: CCTCGCCCACCACGGTGCCCAGCCCGGCCTCAGGGA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCCAGGTGGGGGTCGCTaGAGCTGCGTGTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLPGGGR*SCVCQP
Trigger: AGGCTGACACACGCAGCTCCAGCGACCCCCACCTGG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACTTGTGGTCTCCAGGTaGGGGTCGCTGGAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRLVVSR*GSLELR
Trigger: ACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCTCAGCGAAGGAGGTGTaGGTGTCAGTGAGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSSAKEV*VSVSSP
Trigger: CGGGGAACTCACTGACACCCACACCTCCTTCGCTGA...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGCGCCTTCTATCTCATaGTCCTCGAAGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNAPSIS*SSKRSR
Trigger: CCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCCGGAGATGGAAGACTaGGCAGCTGCAGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNPEMED*AAAVGP
Trigger: TGGTCCCACTGCAGCTGCCCAGTCTTCCATCTCCGG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGTCTCCCAGGCCGGCTaGTCCCGCGGGTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRVSQAG*SRGCTA
Trigger: TGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGAACCCCGCTCAGGCTaGGTGAGGCTCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELREPRSG*VRLWKD
Trigger: GTCCTTCCAGAGCCTCACCCAGCCTGAGCGGGGTTC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCCGGCAAAGCCTCCTaGGCCCAGGCTGTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRAGKAS*AQAVPR
Trigger: ACGCGGCACAGCCTGGGCCCAGGAGGCTTTGCCGGC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGTCGGTGATCCCCAGCTaGGCGTGGTCGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVSVIPS*AWSWRS
Trigger: GCTTCTCCACGACCACGCTCAGCTGGGGATCACCGA...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAAGCCATTCTCGTCGGTaGTCCCCAGCTGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRSHSRR*SPAERG
Trigger: ACCACGCTCAGCTGGGGATCACCGACGAGAATGGCT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCTGCTAAAGGGCCACTaGTGTTGCTCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNLLKGH*CCSPGR
Trigger: CCGACCAGGAGAGCAACATCAGTGGCCCTTTAGCAG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCAGGCTCGGGCCGCTaGCCAACGGCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPGSGR*PTASGQ
Trigger: CTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTGGCGTGCACAACGATaGGGCCAGCTGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAWRAQR*GQLAAA
Trigger: TGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACACTGCTGGGCTTCCCTaGGGCCGGGCTGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDTAGLP*GRAGHR
Trigger: ACGGTGCCCAGCCCGGCCTCAGGGAAGCCCAGCAGT...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGGTGGCCCACGCGCGTaGCGCCCAGCTCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDGGPRA*RPAPRS
Trigger: ACTTCGTGGAGCTGGGCGTCACGCGCGTGGGCCACC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTGCCGTCCAGCTGCCTaGGCGCGCGCTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQACRPAA*ARARCS
Trigger: TGAACATCGAGCGCGCGCTCAGGCAGCTGGACGGCA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGGCATGTGGTCCAGGCTaGGGAGGTTTGTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVACGPG*GGLCGR
Trigger: CCGGCCACACAAACCTCCTCAGCCTGGACCACATGC...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAACGGCCTCGCCGCGGTaGAGCGGGATCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRTASPR*SGISPS
Trigger: TGAAGGCGAGATCCCGCTGCACCGCGGCGAGGCCGT...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGCCGTGTGTCATGCTaGCTCATCTGCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGRVSC*LICTSS
Trigger: GGAGGAAGTGCAGATGAGGCAGCATGACACACGGCC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CCCGACCATGGGGGATCGACACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGTCAGGCCGTGTGTCATaGTGCCTCATCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PDHGGSTPSCCDGRLLGRSGRVS*CLICTS
Trigger: GGAAGTGCAGATGAGGCAGCATGACACACGGCCTGA...CCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCCCCCATGGTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCTCGTGGTCCCGTTTCTaGAGGACAGCCACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSSWSRF*RTATLS
Trigger: TGACAAAGTGGCTGTCCTGCAGAAACGGGACCACGA...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGAGCGCGCGCGCTTCTaGCGCTCGGGATACGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDERARF*RSGYGS
Trigger: GCTGCCGTATCCCGAGCGGCAGAAGCGCGCGCGCTC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATCACCAGGGGGCTCTTaGGGCGCTGCGGCTTGGACG +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRSPGGS*GAAAWT
Trigger: CGTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGGGCCAACTCCGGGGTaGCCGGGCGCTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAGPTPG*PGAPLR
Trigger: CCGAAGAGGAGCGCCCGGGCACCCCGGAGTTGGCCC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGCCACAGCCGCTGACTaGATGGGGGCCGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDATAAD*MGAGAN
Trigger: GTTGGCCCCGGCCCCCATGCAGTCAGCGGCTGTGGC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACACACCGTGGAGATGGTaGTTGTGGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHTPWRW*LWSPGG
Trigger: CCCACCTGGAGACCACAAGCACCATCTCCACGGTGT...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGGATCGACACCGAGCTaGTGCGATGGGCGACTTCTT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSGSTPS*CDGRLL
Trigger: AAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGATCGACACCGAGCTaGTGCGATGGGCGACTTCTT +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGSTPS*CDGRLL
Trigger: AAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCCGGGCCCCCGGGGCTaGGCTGCGCTGAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFPGPRG*AALKWS
Trigger: GCTCCATTTCAGCGCAGCGCAGCCCCGGGGGCCCGG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCACCTCCTTGGGCTCGTaGGGGATGGAGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLTSLGS*GMERLD
Trigger: GTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CACCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTGCCCAGGAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HRAAAMGDFLAGSSRLPRKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...CCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGTCCTGACCTCGCATaGTGGACTAGGTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGPDLA*WTRFPL
Trigger: GAGGGGGAACCTAGTCCAGCATGCGAGGTCAGGACC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGGAAGACTGGGCAGCTaGAGTGGGACCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSGRLGS*SGTSGS
Trigger: ACTTCCACTGGTCCCACTGCAGCTGCCCAGTCTTCC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACCTGGGCCCAGGCTGTaGCGCGTCGTCGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAPGPRL*RVVAGR
Trigger: TCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGGCCCGGGTGGCCACTaGCCCTTGTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFGPGGH*PLWGQG
Trigger: ACCCTGGCCCCACAAGGGGCAGTGGCCACCCGGGCC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGGTGCAGGTGCCACTTaGGCTCCACCGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLGAGAT*APPPGS
Trigger: AGATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGTGGCCAGGTGCAGGTaGCACTTGCGCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRVARCR*HLRSTA
Trigger: GGCGGTGGAGCGCAAGTGGCACCTGCACCTGGCCAC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCACGCCAGGGGCTCTaGGCCGAGCCCCGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPRQGL*AEPRPL
Trigger: AAGAGGACGGGGCTCGGCGCAGAGCCCCTGGCGTGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCCAAAGCGGCAGGCCTaGTGGATCTCCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLPKRQA*WISCQP
Trigger: TGGCTGGCAGGAGATCCACCAGGCCTGCCGCTTTGG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGCGATGATGGCCACCTaGAAGGCTGTCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHAMMAT*KAVWLL
Trigger: CAACAGCCAGACAGCCTTCCAGGTGGCCATCATCGC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGGCTGATCTTGCTTTaGCCGGCCCTGCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGLILL*PALPAK
Trigger: TTTAGCAGGCAGGGCCGGCCAAAGCAAGATCAGCCC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCAGCTGTCATGGACTTaGAGCGCAGGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHQLSWT*SAGSVW
Trigger: CCACACTGACCCTGCGCTCCAAGTCCATGACAGCTG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGGGCCTGGGAGGCCCTaGCGTTCAAACAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNGPGRP*RSNNEL
Trigger: TAGCTCATTGTTTGAACGCCAGGGCCTCCCAGGCCC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGGGCCAGGGGTGAGCTaGGGTCCAGGGGTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHGPGVS*GPGVCR
Trigger: CCGGCAAACCCCTGGACCCCAGCTCACCCCTGGCCC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGACTGTGCACGGGTGTaGGGGACCGGGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDDCARV*GTGRAP
Trigger: AGGCGCCCTCCCGGTCCCCCACACCCGTGCACAGTC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTGGTCTCCTCATCGCTaGACGACAGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQWSPHR*TTAGQV
Trigger: CACCTGCCCAGCTGTCGTCCAGCGATGAGGAGACCA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTGGAGATGGTGCTTGTaGTCTCCAGGTGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQWRWCL*SPGGGR
Trigger: GCGACCCCCACCTGGAGACCACAAGCACCATCTCCA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATCTCCGAGCTCAAGGTaGACATGCTGGACACCGTGG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRSPSSR*TCWTPW
Trigger: CCACGGTGTCCAGCATGTCCACCTTGAGCTCGGAGA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATCAGCGAAGGAGGTGTaGGTGTCAGTGAGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRSAKEV*VSVSSP
Trigger: CGGGGAACTCACTGACACCCACACCTCCTTCGCTGA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGACCGAGCTGCTGCGATaGGCGACTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQTELLR*ATSWQG
Trigger: ACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGCGCCTTCTATCTCATaGTCCTCGAAGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQAPSIS*SSKRSR
Trigger: CCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTTCATGCAACATTCCTaGCCCGGGCGCCGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSFMQHS*PGRRRK
Trigger: CTTACGACGGCGCCCGGGCCAGGAATGTTGCATGAA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAATTCCTGACTGTGCGCTaGGTGGGCTGGGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQFLTVR*VGWAAG
Trigger: ACCGGCCGCCCAGCCCACCCAGCGCACAGTCAGGAA...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACTCTGGAAGGACAGGCTaGGCAAACAGCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNSGRTG*ANSWTQ
Trigger: CTGGGTCCAGCTGTTTGCCCAGCCTGTCCTTCCAGA...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCTGTTCAGGTTACGGCTaGACGCAAACTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGCSGYG*TQTSSW
Trigger: CCATGAAGAAGTTTGCGTCCAGCCGTAACCTGAACA...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AGGAGCCCACTGTGTAGTGCCGAAAGAGCCGCTTCGTCCGGTCCTCCCGCGTTTTCGTGCTGTGGCCAGTaGGTGAGGCCACGTGATGCA +
Preference number: 4 (lower is better)
Translates to: RSPLCSAERAASSGPPAFSCCGQ*VRPRDA
Trigger: TGCATCACGTGGCCTCACCCACTGGCCACAGCACGA...AAACGCGGGAGGACCGGACGAAGCGGCTCTTTCGGCACTACACAGTGGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
3UTR CAA 72 bp AGGGATGTGTCCAGGACGCTGAGGATCATGGACTTCTaGTCCTCGGGTGACTTCCGCTCCTCCCGGGGGACC +
Preference number: 4 (lower is better)
Translates to: RDVSRTLRIMDF*SSGDFRSSRGT
Trigger: GGTCCCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCTCAGCGTCCTGGACACATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
3UTR CAA 72 bp TCAAGGTGGACATGCTGGACACCGTGGAGATGGTGCTaGTGGTCTCCAGGTGGGGGTCGCTGGAGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: SRWTCWTPWRWC*WSPGGGRWSCV
Trigger: CACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAGCACCATCTCCACGGTGTCCAGCATGTCCACCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGGAAAAGCCCATAGTTaGGCGCGTCCTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQGKAHS*ARPGGC
Trigger: ACAGCCTCCAGGACGCGCTCAACTATGGGCTTTTCC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CCCGGCAGAGGCGGCGTGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGACTGCTTATCATCGATaGGGTTCTGGGCATAAACTC +
Preference number: 4 (lower is better)
Translates to: PGRGGVVLLGHELAVRGLTAYHR*GSGHKL
Trigger: GAGTTTATGCCCAGAACCTCATCGATGATAAGCAGT...CAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACAAAGTTCCCTGCGATaGTGGCCACCTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRQSSLR*WPPGRL
Trigger: CAGCCTTCCAGGTGGCCATCATCGCAGGGAACTTTG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGAATCGCTGTGTGAGGTaGGGCTGTCGTAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQNRCVR*GCRRSP
Trigger: TGGGCTCCTACGACAGCCTCACCTCACACAGCGATT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCGACATAATCGCTGTGTaGGGTGAGGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSDIIAV*GEAVVG
Trigger: TCCTACGACAGCCTCACCTCACACAGCGATTATGTC...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGACAGACACAACCTTCATaGCGAGGCGGTTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRQTQPS*RGGCHP
Trigger: AGGGTGGCAACCGCCTCGTCATGAAGGTTGTGTCTG...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAATGGCGTGCACAACGATaGGGCCAGCTGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQWRAQR*GQLAAA
Trigger: TGCAGCGGCCAGCTGGCCTCATCGTTGTGCACGCCA...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATCCCCAGCGGGGACTTaGGCTTGGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRSPAGT*AWAWEA
Trigger: TGCCTCCCAAGCCCAAGCTCAAGTCCCCGCTGGGGA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGCCTCAAGCAGGCAACTaGGCCATGGCTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLPQAGN*AMASFL
Trigger: AAGAAATGAAGCCATGGCTCAGTTGCCTGCTTGAGG...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACGTGCCACCTTGTCCGTaGTATGCAGCTGGACGTAGT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNVPPCP*YAAGRS
Trigger: ACTACGTCCAGCTGCATAGCACGGACAAGGTGGCAC...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCTTGTCCAACAGGCGTaGCACCTTGTCCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNLVQQA*HLVRAM
Trigger: CATAGCACGGACAAGGTGGCACGCCTGTTGGACAAG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTCGCTGGCTGAGCGCTaGAGAGGCCGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSLAER*RGRGDA
Trigger: GGCATCCCCTCGGCCTCTGCAGCGCTCAGCCAGCGA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTATCTCGCCTTCACCCTaGGGGCTGTGCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAISPSP*GLCAFT
Trigger: CGTGAAGGCGCACAGCCCGCAGGGTGAAGGCGAGAT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp AGGAGCCCACTGTGTAGTGCCGAAAGAGCCGCTTCGTCCGGTCCTCCCGCGTTTGGCCGTGTGTCATGCTaGCTCATCTGCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSPLCSAERAASSGPPAFGRVSC*LICTSS
Trigger: GGAGGAAGTGCAGATGAGGCAGCATGACACACGGCC...AAACGCGGGAGGACCGGACGAAGCGGCTCTTTCGGCACTACACAGTGGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp AGCTCGGGGTCATCGTGCTGTGGCCAGTGGGTGAGGCCACGTGATGCACCAGCTTCAGGCCGTGTGTCATaGTGCCTCATCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: SSGSSCCGQWVRPRDAPASGRVS*CLICTS
Trigger: GGAAGTGCAGATGAGGCAGCATGACACACGGCCTGA...AGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR GCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAATCAGAGCCACCACCTaGTTGTGTCCGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRIRATT*LCPTFT
Trigger: GGTGAAGGTCGGACACAAGCAGGTGGTGGCTCTGAT...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTGGCTCTGCGGCGGCTaGCAGCATCTCGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAWLCGG*QHLVQL
Trigger: AAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCGGGCGCCGAGTCCTaGAGGATGATCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASGAES*RMIMER
Trigger: GCGCTCCATGATCATCCTGCAGGACTCGGCGCCCGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGGGCTCTTGCGGCGCTaGGGCTTGGACGGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHGLLRR*GLDGAK
Trigger: CTTCGCTCCGTCCAAGCCGCAGCGCCGCAAGAGCCC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATCGGCGTCGGGACTGTaGACGGGTGTGGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHASASGL*TGVGDR
Trigger: CCGGTCCCCCACACCCGTGCACAGTCCCGACGCCGA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCCGGGGGACCTTCTCTaGCTCCCTGCGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDPGDLL*LPASRH
Trigger: GTGCCTGCTCGCAGGGAGGCAGAGAAGGTCCCCCGG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTGGGCTCCTGCCCGTTaGTGGTGGCGTGCACAACGA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAWAPAR*WWRAQR
Trigger: TCGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCACCCCAGAGTCGGCTaGAGACTCAGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDHPRVG*RLRGRG
Trigger: CCCCCTGCCCCTGAGTCTGCAGCCGACTCTGGGGTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGAGGCGGCGTGGTGCTaGTGGGCCATGAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDEAAWC*WAMSSL
Trigger: CAGCGAGCTCATGGCCCAGCAGCACCACGCCGCCTC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTACCTCCTTGGGCTCGTaGGGGATGGAGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQATSLGS*GMERLD
Trigger: GTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGCTCGCCTAGGTGGATaGTCTCCAGCCAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAARLGG*SPASRP
Trigger: TGGGCGACTGGCTGGAGAGCATCCACCTAGGCGAGC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCGAAGCGGTCGCGGTaGTCGCCTAGGTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASKRSR*SPRWML
Trigger: GAGCATCCACCTAGGCGAGCACCGCGACCGCTTCGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGTAAGCGCGGGTAGGTaGGCGCCTTCTATCTCATGG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRVSAGR*APSISW
Trigger: CCATGAGATAGAAGGCGCGCACCTACCCGCGCTTAC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCAGCTGCCGTCCAGCTaGCTGAGCGCGCGCTCGATG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDQLPSS*LSARSM
Trigger: CATCGAGCGCGCGCTCAGGCAGCTGGACGGCAGCTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCAGCGAAGGAGGTGTGGGTGTCAGTGAGTTCCCCGCTCTCCGAGCTCAAGGTGGGTCCTGACCTCGCATaGTGGACTAGGTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SAKEVWVSVSSPLSELKVGPDLA*WTRFPL
Trigger: GAGGGGGAACCTAGTCCAGCATGCGAGGTCAGGACC...CACCTTGAGCTCGGAGAGCGGGGAACTCACTGACACCCACACCTCCTTCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGAAGACTGGGCAGCTaGAGTGGGACCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGRLGS*SGTSGS
Trigger: ACTTCCACTGGTCCCACTGCAGCTGCCCAGTCTTCC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGGACGACTTGAGGATGGTGCAGGGAGGCTTCTCTaGTGTAGTTGCCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AHLLGLVRDGEAGRLEDGAGRLL*CSCPRA
Trigger: TGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGC...ACCATCCTCAAGTCGTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGGTACACCCCACGCATaGACACGGTGCACGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAGTPHA*TRCTPP
Trigger: TGGAGGCGTGCACCGTGTGCATGCGTGGGGTGTACC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGTGGCGTTGTCCAGCTaGGCTGCGAGGCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDVALSS*AARLRG
Trigger: CCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCAC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCTGCCGCATTCCGCTaGCGTGTGGCACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRAAAFR*RVAQCT
Trigger: CGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCCAAAGCGGCAGGCCTaGTGGATCTCCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAPKRQA*WISCQP
Trigger: TGGCTGGCAGGAGATCCACCAGGCCTGCCGCTTTGG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCACATCCGAGTCTTTGTaGGTCTTGATAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGTSESL*VLITSA
Trigger: TGCAGAGGTTATCAAGACCCACAAAGACTCGGATGT...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTGATGTTGCTCTCCTaGTCGGCATCCCGGTCACGA +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQLMLLS*SASRSR
Trigger: TCGTGACCGGGATGCCGACCAGGAGAGCAACATCAG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTGCGTCTGCGATGTCTaGCCGCAGCGTTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQACVCDV*PQRWLC
Trigger: GCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGGGCCAGGGGTGAGCTaGGGTCCAGGGGTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAGPGVS*GPGVCR
Trigger: CCGGCAAACCCCTGGACCCCAGCTCACCCCTGGCCC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAACAGGGACCCTCGCTCTaGGTCCCGGGCCTGTACATC +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQQGPSL*VPGLYI
Trigger: GATGTACAGGCCCGGGACCCAGAGCGAGGGTCCCTG...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCCAGCAGGACCCCGTTaGCAAACTCTTCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLPAGPR*QTLQGV
Trigger: CACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGCGGCGTGGTGCTGCTaGGCCATGAGCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHAAWCC*AMSSLS
Trigger: GGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCCGGCAGAGGCGGCGTaGTGCTGCTGGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFPAEAA*CCWAMS
Trigger: GCTCATGGCCCAGCAGCACCACGCCGCCTCTGCCGG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTGCAGCGGCTTCTGCTaGAAGGGTCGGCGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDCSGFC*KGRRGP
Trigger: CGGCCCACGCCGACCCTTCCAGCAGAAGCCGCTGCA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTTCCTGACTGTGCGCTaGGTGGGCTGGGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDFLTVR*VGWAAG
Trigger: ACCGGCCGCCCAGCCCACCCAGCGCACAGTCAGGAA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGGGCCACTAGGGCCCTaGCCAACCCCAGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDGPLGP*PTPDQL
Trigger: CAGCTGGTCTGGGGTTGGCCAGGGCCCTAGTGGCCC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGTCTCCCAGGCCGGCTaGTCCCGCGGGTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAVSQAG*SRGCTA
Trigger: TGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGTCTCCCAGGCCGGCTaGTCCCGCGGGTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFVSQAG*SRGCTA
Trigger: TGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGGCTGGGTGAGGCTCTaGAAGGACAGGCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLGWVRL*KDRLGK
Trigger: TTTGCCCAGCCTGTCCTTCCAGAGCCTCACCCAGCC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACGGCGTGCCAGGCCCCTaGGTTGTGAAAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHGVPGP*VVKTSV
Trigger: AACAGAAGTTTTCACAACCCAGGGGCCTGGCACGCC...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGATGCTGCTGTGTGACCTaGACTGTTGGCGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRCCCVT*TVGGRM
Trigger: CATCCTTCCGCCAACAGTCCAGGTCACACAGCAGCA...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp ACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGAGGTTCGCCTTTGTGTaGAGCTTTGCAAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: TLAHRVLHRGAPREAPFQRFAFV*SFANCL
Trigger: TAAGCAGTTTGCAAAGCTTCACACAAAGGCGAACCT...CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCTTCTTGTCCTCGGGTaGCTTCCGCTCCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDLLVLG*LPLLPG
Trigger: CCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGGGGCTGCGCTGCGCTaGAATGGAGCTCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHGAALR*NGAQLT
Trigger: GGTGAGCTGAGCTCCATTTCAGCGCAGCGCAGCCCC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACACCACGAGCAGCACCTaGAGGGTCGGTGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHTTSST*RVGGAH
Trigger: GTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAGTGCAGGATGGCCTCTaGCTTTCTTTGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRVQDGL*LSLEEE
Trigger: CTCCTCTTCCAAAGAAAGTCAGAGGCCATCCTGCAC...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGCTCACCGAGGCTGCTaGAGAGCACAGCCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFAHRGC*RAQPAL
Trigger: GAGCGCCGGCTGTGCTCTTCAGCAGCCTCGGTGAGC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659388.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAAGAAGCTGCTGGCTGTaGCTCCCCCTTCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRRSCWL*LPLQVD
Trigger: ATCAACCTGAAGGGGGAGGCACAGCCAGCAGCTTCT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCGGGAACCAGCCCGTaGGGCCTTTCACGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPGTSP*GLSRFP
Trigger: AGGGAACCGTGAAAGGCCGCACGGGCTGGTTCCCGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGCAGAGGCGGCGTGGTaGTGCTGGGCCATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAAEAAW*CWAMSS
Trigger: CGAGCTCATGGCCCAGCAGCACCACGCCGCCTCTGC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCGACACCGAGCTGCTaGGATGGGCGACTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASTPSC*DGRLLG
Trigger: GCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACCCCCGGGGCTGCGCTaGGCTGAAATGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAPPGLR*AEMELS
Trigger: GCTGAGCTCCATTTCAGCGCAGCGCAGCCCCGGGGG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCCCCCGGGGCTGCGCTaGGCTGAAATGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFPPGLR*AEMELS
Trigger: GCTGAGCTCCATTTCAGCGCAGCGCAGCCCCGGGGG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCCGGGCCCCCGGGGCTaGGCTGCGCTGAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHPGPRG*AALKWS
Trigger: GCTCCATTTCAGCGCAGCGCAGCCCCGGGGGCCCGG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGAACTTGCTCCAGAGCTaGAGCGGCTTCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQNLLQS*SGFCWK
Trigger: CTTCCAGCAGAAGCCGCTGCAGCTCTGGAGCAAGTT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAAACTTGCTCCAGAGCTaGAGCGGCTTCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRNLLQS*SGFCWK
Trigger: CTTCCAGCAGAAGCCGCTGCAGCTCTGGAGCAAGTT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCACACGGCTCCCACGTaGTCAGACGCACCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAHTAPT*SDAPSF
Trigger: GAAACTGGGTGCGTCTGAGCACGTGGGAGCCGTGTG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTACAGACTTGGTCCGTaGAATCCCCTTCCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSYRLGP*NPLPQG
Trigger: TCCTTGCGGAAGGGGATTCCACGGACCAAGTCTGTA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCGGACAGGAACACAGTaGAGCGGCGCCGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHRTGTQ*SGAAPP
Trigger: TGGAGGAGCGGCGCCGCTCCACTGTGTTCCTGTCCG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCTTGCCGGTGAGTGGGTaGATGAAGGTGGAACCCGAG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLLPVSG*MKVEPE
Trigger: CTCGGGTTCCACCTTCATCCACCCACTCACCGGCAA...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCCCTGAGGCCGGGCTaGGCACCGTGGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHSLRPG*APWWAR
Trigger: CCTCGCCCACCACGGTGCCCAGCCCGGCCTCAGGGA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCAGGTGGGGGTCGCTaGAGCTGCGTGTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPGGGR*SCVCQP
Trigger: AGGCTGACACACGCAGCTCCAGCGACCCCCACCTGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTCGATGTTCATGCGGTaGCCCACGCGCGTGACGCCC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDSMFMR*PTRVTP
Trigger: GGGCGTCACGCGCGTGGGCCACCGCATGAACATCGA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCCGGAGATGGAAGACTaGGCAGCTGCAGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAPEMED*AAAVGP
Trigger: TGGTCCCACTGCAGCTGCCCAGTCTTCCATCTCCGG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTCCCCTGCCCCGTTGTaGGGTGGCAGTGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDSPAPL*GGSGSE
Trigger: CTCACTGCCACTGCCACCCCACAACGGGGCAGGGGA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCACCCAGGGTGCAGGATaGCCTCTGACTTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSTQGAG*PLTFFG
Trigger: TCCAAAGAAAGTCAGAGGCCATCCTGCACCCTGGGT...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCTCTGGAAGGACAGGCTaGGCAAACAGCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSGRTG*ANSWTQ
Trigger: CTGGGTCCAGCTGTTTGCCCAGCCTGTCCTTCCAGA...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGGCTGGGTGAGGCTCTaGAAGGACAGGCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAGWVRL*KDRLGK
Trigger: TTTGCCCAGCCTGTCCTTCCAGAGCCTCACCCAGCC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCTCAGAAGCCCAAGGTaGGGGCGCTGCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDLRSPR*GRCLQG
Trigger: CCCTTGGAGGCAGCGCCCCCACCTTGGGCTTCTGAG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGGCGTGCCAGGCCCCTaGGTTGTGAAAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRGVPGP*VVKTSV
Trigger: AACAGAAGTTTTCACAACCCAGGGGCCTGGCACGCC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCTGTGCCCAGGGAGTaGGGCCGGTGGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHSVPRE*GRWARA
Trigger: CGCCCTGGCCCACCGGCCCCACTCCCTGGGCACAGA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGGCCACTGCCCCTTGTaGGGCCAGGGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAGHCPL*GQGVVS
Trigger: GCTGACCACACCCTGGCCCCACAAGGGGCAGTGGCC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGACGATCAAGGGTGCTaGCGGGGGTCACGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFDDQGC*RGSRCR
Trigger: CCGGCACCGTGACCCCCGCCAGCACCCTTGATCGTC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAACCTCCCCCTTCAGGTTaGTATCGCTGGCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQPPPSG*YRWLSA
Trigger: AGCGCTCAGCCAGCGATATCAACCTGAAGGGGGAGG...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGGTGCTGCTGGGCCATaGGCTCGCTGTCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFGAAGP*ARCPRT
Trigger: AGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCCATACAAAAGGAGGTaGAGCGGAACTGACCCTGTA +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHPYKRR*SGTDPV
Trigger: TACAGGGTCAGTTCCGCTTCACCTCCTTTTGTATGG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACCATACAAAAGGAGGTaGAGCGGAACTGACCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRPYKRR*SGTDPV
Trigger: TACAGGGTCAGTTCCGCTTCACCTCCTTTTGTATGG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGACCTCAAGCAGGCAACTaGGCCATGGCTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRPQAGN*AMASFL
Trigger: AAGAAATGAAGCCATGGCTCAGTTGCCTGCTTGAGG...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGCATGTGGTCCAGGCTaGGGAGGTTTGTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDACGPG*GGLCGR
Trigger: CCGGCCACACAAACCTCCTCAGCCTGGACCACATGC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTGGCGTGTGGCACAGTaGACGGCAGTGAGCCCATCG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDWRVAQ*TAVSPS
Trigger: CGATGGGCTCACTGCCGTGCACTGTGCCACACGCCA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTCCAGATGCTGCACGTaGCCAAAGCGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSRCCT*PKRQAW
Trigger: CCAGGCCTGCCGCTTTGGGCACGTGCAGCATCTGGA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAGAAGCTGCTGGCTGTaGCTCCCCCTTCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLRSCWL*LPLQVD
Trigger: ATCAACCTGAAGGGGGAGGCACAGCCAGCAGCTTCT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCGATCTTTCTCCTCTTaGAGCCGCTGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQARSFSS*SRWSSS
Trigger: GCTGCTGCTCCAGCGGCTGCAAGAGGAGAAAGATCG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAGCTCAAGGTGGACATaGTGGACACCGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSSRWT*WTPWRW
Trigger: CCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACACCTCCTTGGGCTCGTaGGGGATGGAGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDTSLGS*GMERLD
Trigger: GTCCAGCCTCTCCATCCCGCACGAGCCCAAGGAGGT...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCAGCTGCAGCGGCTTCTaGTGGAAGGGTCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSCSGF*WKGRRG
Trigger: CCCACGCCGACCCTTCCAGCAGAAGCCGCTGCAGCT...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAACTTGCTCCAGAGCTaGAGCGGCTTCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLNLLQS*SGFCWK
Trigger: CTTCCAGCAGAAGCCGCTGCAGCTCTGGAGCAAGTT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCGCCCACGTCGAACTTaGTCCAGAGCTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDRPRRT*SRAAAA
Trigger: AGCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTCGAAGCGGTCGCGGTaGTCGCCTAGGTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSKRSR*SPRWML
Trigger: GAGCATCCACCTAGGCGAGCACCGCGACCGCTTCGA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAATGGCCACCAGGAGCTaGGAAGGAGGTGGTCACGCT +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRMATRS*EGGGHA
Trigger: AGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCAT...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACACGCATGCACACGGTaGACGCCTCCACGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQHACTR*TPPRPR
Trigger: GCGGGGCCGTGGAGGCGTGCACCGTGTGCATGCGTG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCCAAGGTGGGGGCGCTaGCTCCAAGGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHPRWGR*LQGALG
Trigger: CCCAAGGGCCCCTTGGAGGCAGCGCCCCCACCTTGG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCCAAGGTGGGGGCGCTaGCTCCAAGGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHPRWGR*LQGALG
Trigger: CCCAAGGGCCCCTTGGAGGCAGCGCCCCCACCTTGG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGGCCCGGGTGGCCACTaGCCCTTGTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIGPGGH*PLWGQG
Trigger: ACCCTGGCCCCACAAGGGGCAGTGGCCACCCGGGCC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCTGAGCACCCACCCTaGAGGCTTCGAGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPEHPP*RLRGLS
Trigger: GCTTAGCCCTCGAAGCCTGCAGGGTGGGTGCTCAGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTCCTCTTCCCTCAGGTaGCGCCTCCCCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSSSLR*RLPLPS
Trigger: GGAGGGAAGGGGGAGGCGGCACCTGAGGGAAGAGGA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGCGTCCTGGAGGCTGTaGTTGAGGGCGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFASWRL*LRAQST
Trigger: CGTGCTCTGCGCCCTCAACCACAGCCTCCAGGACGC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCAGCGCAGGGTCAGTGTaGTGCTGGGGGCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSAGSV*CWGPSW
Trigger: CCAAGAGGGCCCCCAGCACCACACTGACCCTGCGCT...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCAGCTGTCATGGACTTaGAGCGCAGGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAQLSWT*SAGSVW
Trigger: CCACACTGACCCTGCGCTCCAAGTCCATGACAGCTG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATGTCTGGCCGCAGCGTTaGCTCTGCGGCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHVWPQR*LCGGCQ
Trigger: CTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGAC...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGTCTGGCCGCAGCGTTaGCTCTGCGGCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQVWPQR*LCGGCQ
Trigger: CTGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGAC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTGCGTCTGCGATGTCTaGCCGCAGCGTTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHCVCDV*PQRWLC
Trigger: GCAGAGCCAACGCTGCGGCCAGACATCGCAGACGCA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACAGCTTCTCTGGGCCTaGGAGGCCCTGGCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRQLLWA*EALAFK
Trigger: TTTGAACGCCAGGGCCTCCCAGGCCCAGAGAAGCTG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCGGACAGGAACACAGTaGAGCGGCGCCGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFRTGTQ*SGAAPP
Trigger: TGGAGGAGCGGCGCCGCTCCACTGTGTTCCTGTCCG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTTGCCGGTGAGTGGGTaGATGAAGGTGGAACCCGAG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQALPVSG*MKVEPE
Trigger: CTCGGGTTCCACCTTCATCCACCCACTCACCGGCAA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGACCGGGAGGGCGCCTaGGAGGCCAGAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQDREGA*EARARS
Trigger: AGAGCGAGCTCTGGCCTCCCAGGCGCCCTCCCGGTC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCTTGTGGTCTCCAGGTaGGGGTCGCTGGAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDLVVSR*GSLELR
Trigger: ACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAACATGCTGGACACCGTaGAGATGGTGCTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRTCWTP*RWCLWS
Trigger: AGACCACAAGCACCATCTCCACGGTGTCCAGCATGT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCTCCGAGCTCAAGGTaGACATGCTGGACACCGTGG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASPSSR*TCWTPW
Trigger: CCACGGTGTCCAGCATGTCCACCTTGAGCTCGGAGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTTCAGCGAAGGAGGTGTaGGTGTCAGTGAGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASAKEV*VSVSSP
Trigger: CGGGGAACTCACTGACACCCACACCTCCTTCGCTGA...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCGATGGGCGACTTCTTaGCAGGGTCCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDRWATS*QGPAGC
Trigger: GCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCGCCTTCTATCTCATaGTCCTCGAAGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRAPSIS*SSKRSR
Trigger: CCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTCGATGTTCATGCGGTaGCCCACGCGCGTGACGCCC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSMFMR*PTRVTP
Trigger: GGGCGTCACGCGCGTGGGCCACCGCATGAACATCGA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGGAAGATGGCTGCGGTaGAGCGGCAGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHGRWLR*SGRALP
Trigger: GGGCAGGGCCCTGCCGCTCCACCGCAGCCATCTTCC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGTCCAGAGCGGCCCCTaGTGGCCACTCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRVQSGP*WPLSNQ
Trigger: CTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGAC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGGCGTGCCAGGCCCCTaGGTTGTGAAAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLGVPGP*VVKTSV
Trigger: AACAGAAGTTTTCACAACCCAGGGGCCTGGCACGCC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCTGCTGCTGTGTGACCTaGACTGTTGGCGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLCCCVT*TVGGRM
Trigger: CATCCTTCCGCCAACAGTCCAGGTCACACAGCAGCA...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGCCACGGGCCTGGGCTaGGCCTGGCCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIATGLG*AWPAKP
Trigger: AGGCTTTGCCGGCCAGGCCCAGCCCAGGCCCGTGGC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACAAAGTTCCCTGCGATaGTGGCCACCTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRQSSLR*WPPGRL
Trigger: CAGCCTTCCAGGTGGCCATCATCGCAGGGAACTTTG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCGCCCTCCCCAATGCTaGGCACCTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHRPPQC*APSRPR
Trigger: GCGAGGCCGTGAAGGTGCTCAGCATTGGGGAGGGCG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCCAGGCTCGGGCCGCTaGCCAACGGCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIPGSGR*PTASGQ
Trigger: CTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTACTGCTGGGCTTCCCTaGGGCCGGGCTGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNITAGLP*GRAGHR
Trigger: ACGGTGCCCAGCCCGGCCTCAGGGAAGCCCAGCAGT...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAGGTGTGGGTGTCAGTaGGTTCCCCGCTCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHARCGCQ*VPRSPS
Trigger: GCTCGGAGAGCGGGGAACTCACTGACACCCACACCT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCACAGAAACTTGTGAGTaGCGTGGATGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSTETCE*RGWSLV
Trigger: GACTAAGCTCCATCCACGTCACTCACAAGTTTCTGT...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGCATGTGGTCCAGGCTaGGGAGGTTTGTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFACGPG*GGLCGR
Trigger: CCGGCCACACAAACCTCCTCAGCCTGGACCACATGC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCGGCTGGCTCTGGCCTaGGCACCCACCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIRLALA*APTLQA
Trigger: AGCCTGCAGGGTGGGTGCTCAGGCCAGAGCCAGCCG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGCCTGGTGGATCTCCTaGCAGCCATTCTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDAWWIS*QPFSSV
Trigger: CACCGACGAGAATGGCTGGCAGGAGATCCACCAGGC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACAGAGGCCGAGGGGATaGCAAGCCACTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQQRPRG*QATGAS
Trigger: GCTGGCCCCAGTGGCTTGGCATCCCCTCGGCCTCTG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACGATCTTTCTCCTCTTaGAGCCGCTGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRRSFSS*SRWSSS
Trigger: GCTGCTGCTCCAGCGGCTGCAAGAGGAGAAAGATCG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATGCAGGGTCAGTGTGGTaGTGGGGGCCCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHAGSVW*WGPSWG
Trigger: CCCCCAAGAGGGCCCCCAGCACCACACTGACCCTGC...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTGGCTCTGCGGCGGCTaGCAGCATCTCGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFWLCGG*QHLVQL
Trigger: AAGCTGGACGAGATGCTGGCAGCCGCCGCAGAGCCA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCCGTTGCTGGTGGCGTaGACAACGATGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHPLLVA*TTMRPA
Trigger: AGCTGGCCTCATCGTTGTGCACGCCACCAGCAACGG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCACCCCAGAGTCGGCTaGAGACTCAGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHHPRVG*RLRGRG
Trigger: CCCCCTGCCCCTGAGTCTGCAGCCGACTCTGGGGTG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCTCAAGGTGGACATaGTGGACACCGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQASSRWT*WTPWRW
Trigger: CCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATCGCTGTCCGAGGACTaGTTCAGCAGCGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHASLSED*FSSGSL
Trigger: CAGGGACCCGCTGCTGAAGCAGTCCTCGGACAGCGA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGGATCGACACCGAGCTaGTGCGATGGGCGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRGSTPS*CDGRLL
Trigger: AAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGATCC...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACCCCCGGGGCTGCGCTaGGCTGAAATGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQPPGLR*AEMELS
Trigger: GCTGAGCTCCATTTCAGCGCAGCGCAGCCCCGGGGG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATGCGCGCGCTCACGCTaGGCACCACGAAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQCARSR*APRSAP
Trigger: AGGTGCGCTTCGTGGTGCGCAGCGTGAGCGCGCGCA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGCTCGCCTAGGTGGATaGTCTCCAGCCAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFARLGG*SPASRP
Trigger: TGGGCGACTGGCTGGAGAGCATCCACCTAGGCGAGC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACAGCTGCCGTCCAGCTaGCTGAGCGCGCGCTCGATG +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQQLPSS*LSARSM
Trigger: CATCGAGCGCGCGCTCAGGCAGCTGGACGGCAGCTG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCACACGGCTCCCACGTaGTCAGACGCACCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDHTAPT*SDAPSF
Trigger: GAAACTGGGTGCGTCTGAGCACGTGGGAGCCGTGTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAGGCACTTCGTCTGCTaGAGGTCCGGGATGCCGACG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHARHFVC*RSGMPT
Trigger: CGTCGGCATCCCGGACCTGCAGCAGACGAAGTGCCT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCCTGAGCACCCACCCTaGAGGCTTCGAGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFPEHPP*RLRGLS
Trigger: GCTTAGCCCTCGAAGCCTGCAGGGTGGGTGCTCAGG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCACGCGACCCACAGCTaGAACCACACAATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDHATHS*NHTMGS
Trigger: GCTGCCCATTGTGTGGTTGCAGCTGTGGGTCGCGTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659388.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCCTTTAGCAGGTCCGTaGCGTTGTCCAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDPLAGP*RCPAGL
Trigger: CAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACCTTTTCTTCTCCGAATaGAGGCAAGTTCCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: AGRPVRALSNVQGESPSNLFFSE*RQVPRA
Trigger: AGCTCGAGGAACTTGCCTCCATTCGGAGAAGAAAAG...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCCTTTTCTTCTCCGAATaGAGGCAAGTTCCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GRPVRALSNVQGESPSNSLFFSE*RQVPRA
Trigger: AGCTCGAGGAACTTGCCTCCATTCGGAGAAGAAAAG...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCAGCTTCTCTGGGCCTaGGAGGCCCTGGCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDQLLWA*EALAFK
Trigger: TTTGAACGCCAGGGCCTCCCAGGCCCAGAGAAGCTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACCTCCCCTACAGACTTaGTCCGTGGAATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRPPLQT*SVESPS
Trigger: GGAAGGGGATTCCACGGACCAAGTCTGTAGGGGAGG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGGAGGCGCTCGTCGATaGAGCGGGAGGGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQGGARR*SGRAVG
Trigger: CCCTACAGCCCTCCCGCTCCATCGACGAGCGCCTCC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCCAGCAGGACCCCGTTaGCAAACTCTTCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDPAGPR*QTLQGV
Trigger: CACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACTTGTGGTCTCCAGGTaGGGGTCGCTGGAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHALVVSR*GSLELR
Trigger: ACGCAGCTCCAGCGACCCCCACCTGGAGACCACAAG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTGGAGATGGTGCTTGTaGTCTCCAGGTGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHWRWCL*SPGGGR
Trigger: GCGACCCCCACCTGGAGACCACAAGCACCATCTCCA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCACATGCTGGACACCGTaGAGATGGTGCTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLTCWTP*RWCLWS
Trigger: AGACCACAAGCACCATCTCCACGGTGTCCAGCATGT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGCGGCGTGGTGCTGCTaGGCCATGAGCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHAAWCC*AMSSLS
Trigger: GGACAGCGAGCTCATGGCCCAGCAGCACCACGCCGC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTCACTGATCACAGTTaGTTTGTCGTCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQLTDHS*FVVFRP
Trigger: GGGCCTGAAGACGACAAACCAACTGTGATCAGTGAG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCGGGGTAGCGGCCACTaGGCCTCACCGAGTACGAGG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHRGSGH*ASPSTR
Trigger: CCTCGTACTCGGTGAGGCCCAGTGGCCGCTACCCCG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCCTGACCTCGCATGCTaGACTAGGTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDPDLAC*TRFPLW
Trigger: CCAGAGGGGGAACCTAGTCCAGCATGCGAGGTCAGG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGGAAGATGGCTGCGGTaGAGCGGCAGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIGRWLR*SGRALP
Trigger: GGGCAGGGCCCTGCCGCTCCACCGCAGCCATCTTCC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCAGAGCGGCCCCTGGTaGCCACTCAGTAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHQSGPW*PLSNQA
Trigger: TGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRASDFL*KRRQGA
Trigger: AGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGC...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATGTGGGGCCAGGGTGTaGTCAGCCAAGCCACGGGCC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQCGARV*SAKPRA
Trigger: GGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGGTCACGGTGCCGGCTaGCTCTGGCCTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHGHGAG*LWPEHP
Trigger: TGGGTGCTCAGGCCAGAGCCAGCCGGCACCGTGACC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTTGCGCTCCACCGCCTaGATCTCCTCGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFLRSTA*ISSYSR
Trigger: GCGGGAGTACGAGGAGATCCAGGCGGTGGAGCGCAA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGCTGGACGTAGTCCATaGACTTCTTCAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAAGRSP*TSSGSP
Trigger: AGGCGAACCTGAAGAAGTTCATGGACTACGTCCAGC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCAGGGGGCACTCTCCTaGGTCAGGGTCATGGAAGTT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHQGALS*VRVMEV
Trigger: AACTTCCATGACCCTGACTCAGGAGAGTGCCCCCTG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACACAGTGCACGGCAGTaGGCCCATCGCGAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQHSARQ*AHRECG
Trigger: TCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAGCCATTCTCGTCGGTaGTCCCCAGCTGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHASHSRR*SPAERG
Trigger: ACCACGCTCAGCTGGGGATCACCGACGAGAATGGCT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACCTCCCCCTTCAGGTTaGTATCGCTGGCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAPPPSG*YRWLSA
Trigger: AGCGCTCAGCCAGCGATATCAACCTGAAGGGGGAGG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGACATAATCGCTGTGTaGGGTGAGGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQADIIAV*GEAVVG
Trigger: TCCTACGACAGCCTCACCTCACACAGCGATTATGTC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCATGTGTCCAGGACGCTaGGGATCATGGACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLMCPGR*GSWTSC
Trigger: ACAAGAAGTCCATGATCCTCAGCGTCCTGGACACAT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATTCCCCAGCGGGGACTTaGGCTTGGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHSPAGT*AWAWEA
Trigger: TGCCTCCCAAGCCCAAGCTCAAGTCCCCGCTGGGGA...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGTGCAGGATGGCCTCTaGCTTTCTTTGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAVQDGL*LSLEEE
Trigger: CTCCTCTTCCAAAGAAAGTCAGAGGCCATCCTGCAC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACTAGGGGTCCCCCTATaGTGCCCTCAGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHALGVPL*CPQKPK
Trigger: CTTGGGCTTCTGAGGGCATCATAGGGGGACCCCTAG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCCTCAAGCAGGCAACTaGGCCATGGCTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLPQAGN*AMASFL
Trigger: AAGAAATGAAGCCATGGCTCAGTTGCCTGCTTGAGG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGGCCGTGTGTCATGCTaGCTCATCTGCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHGRVSC*LICTSS
Trigger: GGAGGAAGTGCAGATGAGGCAGCATGACACACGGCC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGGCGGCTCTGGAGTCTaGGTCTGCGATGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHGGSGV*VCDVWP
Trigger: CGGCCAGACATCGCAGACGCAGACTCCAGAGCCGCC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATCGACACCGAGCTGCTaGGATGGGCGACTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHASTPSC*DGRLLG
Trigger: GCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCAGCTGGACCCAGGGTaGAGGATGGCCTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDQLDPG*RMASDF
Trigger: AAAGTCAGAGGCCATCCTGCACCCTGGGTCCAGCTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCAGCTGGACCCAGGGTaGAGGATGGCCTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHQLDPG*RMASDF
Trigger: AAAGTCAGAGGCCATCCTGCACCCTGGGTCCAGCTG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGGAGACGATCAAGGGTaGTGGCGGGGGTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHGDDQG*WRGSRC
Trigger: GCACCGTGACCCCCGCCAGCACCCTTGATCGTCTCC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGCGATGATGGCCACCTaGAAGGCTGTCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHAMMAT*KAVWLL
Trigger: CAACAGCCAGACAGCCTTCCAGGTGGCCATCATCGC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTCCAGGAGAAGCTGCTaGCTGTGCCTCCCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSRRSC*LCLPLQ
Trigger: CTGAAGGGGGAGGCACAGCCAGCAGCTTCTCCTGGA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCGCTGGAGCAGCAGCTaGTGGGGGAGGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHRWSSS*WGRLLS
Trigger: GCTGAGAAGCCTCCCCCACCAGCTGCTGCTCCAGCG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGGGCCTGGGAGGCCCTaGCGTTCAAACAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHGPGRP*RSNNEL
Trigger: TAGCTCATTGTTTGAACGCCAGGGCCTCCCAGGCCC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCAGGGACCCTCGCTCTaGGTCCCGGGCCTGTACATC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHQGPSL*VPGLYI
Trigger: GATGTACAGGCCCGGGACCCAGAGCGAGGGTCCCTG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACACAGGAATCCAGGCTaGGCTCCGTGGGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAHRNPG*APWGES
Trigger: GCTTTCTCCCCACGGAGCCCAGCCTGGATTCCTGTG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAACGATGAGGCCAGCTaGCCGCTGCAGGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHANDEAS*PLQGCV
Trigger: GACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGCCCAGGCCACCAACTaGTTCCTCCCCCAGGGAACG +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQAQATN*FLPQGT
Trigger: CGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCGCTGCGCTGAAATaGAGCTCAGCTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHACAALK*SSAHRG
Trigger: GCCTCGGTGAGCTGAGCTCCATTTCAGCGCAGCGCA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCGGGGTAGCGGCCACTaGGCCTCACCGAGTACGAGG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIRGSGH*ASPSTR
Trigger: CCTCGTACTCGGTGAGGCCCAGTGGCCGCTACCCCG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATCGATGTTCATGCGGTaGCCCACGCGCGTGACGCCC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSMFMR*PTRVTP
Trigger: GGGCGTCACGCGCGTGGGCCACCGCATGAACATCGA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTTCATGCAACATTCCTaGCCCGGGCGCCGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDFMQHS*PGRRRK
Trigger: CTTACGACGGCGCCCGGGCCAGGAATGTTGCATGAA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACCTGACCTCGCATGCTaGACTAGGTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAPDLAC*TRFPLW
Trigger: CCAGAGGGGGAACCTAGTCCAGCATGCGAGGTCAGG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATTCCCCTGCCCCGTTGTaGGGTGGCAGTGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHSPAPL*GGSGSE
Trigger: CTCACTGCCACTGCCACCCCACAACGGGGCAGGGGA...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCAGAGCGGCCCCTGGTaGCCACTCAGTAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFQSGPW*PLSNQA
Trigger: TGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATGCTGCTGTGTGACCTaGACTGTTGGCGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRCCCVT*TVGGRM
Trigger: CATCCTTCCGCCAACAGTCCAGGTCACACAGCAGCA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACAAACATAGATCTCTGTaGGGCGTATCACAACGTCAG +
Preference number: 4 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHKHRSL*GVSQRQ
Trigger: CTGACGTTGTGATACGCCCCACAGAGATCTATGTTT...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTGTGGGGCCAGGGTGTaGTCAGCCAAGCCACGGGCC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNICGARV*SAKPRA
Trigger: GGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACA...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCTGCTAAAGGGCCACTaGTGTTGCTCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFLLKGH*CCSPGR
Trigger: CCGACCAGGAGAGCAACATCAGTGGCCCTTTAGCAG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCTTCTTGTCCTCGGGTaGCTTCCGCTCCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNILLVLG*LPLLPG
Trigger: CCCCGGGAGGAGCGGAAGTCACCCGAGGACAAGAAG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATAGGTGTGGGTGTCAGTaGGTTCCCCGCTCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHRCGCQ*VPRSPS
Trigger: GCTCGGAGAGCGGGGAACTCACTGACACCCACACCT...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAGGCCCCTGGGTTGTaGAAACTTCTGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQQAPGL*KLLFSF
Trigger: AAAAGAAAACAGAAGTTTTCACAACCCAGGGGCCTG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATTGGCGTGTGGCACAGTaGACGGCAGTGAGCCCATCG +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHWRVAQ*TAVSPS
Trigger: CGATGGGCTCACTGCCGTGCACTGTGCCACACGCCA...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATCGTGGTCCCGTTTCTaGAGGACAGCCACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRSWSRF*RTATLS
Trigger: TGACAAAGTGGCTGTCCTGCAGAAACGGGACCACGA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCTCGATGGGGGTCTCTaGTTTGGCTCCCCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHLDGGL*FGSPEH
Trigger: GTGCTCCGGGGAGCCAAAGCAGAGACCCCCATCGAG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAACACCGTGGAGATGGTaGTTGTGGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHATPWRW*LWSPGG
Trigger: CCCACCTGGAGACCACAAGCACCATCTCCACGGTGT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCAGGGTCCAGCAGGCTaGCCAGGCCACCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHQGPAG*PGHQLV
Trigger: AACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACAGGGTCCAGCAGGCTaGCCAGGCCACCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQQGPAG*PGHQLV
Trigger: AACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACAACTTGCTCCAGAGCTaGAGCGGCTTCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHNLLQS*SGFCWK
Trigger: CTTCCAGCAGAAGCCGCTGCAGCTCTGGAGCAAGTT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATCGAAGCGGTCGCGGTaGTCGCCTAGGTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSKRSR*SPRWML
Trigger: GAGCATCCACCTAGGCGAGCACCGCGACCGCTTCGA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGTAAGCGCGGGTAGGTaGGCGCCTTCTATCTCATGG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFVSAGR*APSISW
Trigger: CCATGAGATAGAAGGCGCGCACCTACCCGCGCTTAC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAGGAAGACTGGGCAGCTaGAGTGGGACCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAGRLGS*SGTSGS
Trigger: ACTTCCACTGGTCCCACTGCAGCTGCCCAGTCTTCC...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGAAGAGGAGACAGGGTaGTCTCACAGGTACACCCCA +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHEEETG*SHRYTP
Trigger: TGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCGCAGGCACTTCGTCTaGTGCAGGTCCGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIRRHFV*CRSGMP
Trigger: CGGCATCCCGGACCTGCAGCAGACGAAGTGCCTGCG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCCTTTTCTTCTCCGAATaGAGGCAAGTTCCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLLFFSE*RQVPRA
Trigger: AGCTCGAGGAACTTGCCTCCATTCGGAGAAGAAAAG...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATTGCCGGTGAGTGGGTaGATGAAGGTGGAACCCGAG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHALPVSG*MKVEPE
Trigger: CTCGGGTTCCACCTTCATCCACCCACTCACCGGCAA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTCTCACTGATCACAGTTaGTTTGTCGTCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQALTDHS*FVVFRP
Trigger: GGGCCTGAAGACGACAAACCAACTGTGATCAGTGAG...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCGAAGCGCACCTCCTTaGGCTCGTGCGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHRSAPP*ARAGWR
Trigger: TCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCGAAGCGCACCTCCTTaGGCTCGTGCGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHRSAPP*ARAGWR
Trigger: TCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCGGTGCTCGCCTAGGTaGATGCTCTCCAGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHRCSPR*MLSSQS
Trigger: CGACTGGCTGGAGAGCATCCACCTAGGCGAGCACCG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATTCATGCAACATTCCTaGCCCGGGCGCCGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAFMQHS*PGRRRK
Trigger: CTTACGACGGCGCCCGGGCCAGGAATGTTGCATGAA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAASDFL*KRRQGA
Trigger: AGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGC...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGAAAACATAGATCTCTGTaGGGCGTATCACAACGTCAG +
Preference number: 4 (lower is better)
Translates to: LACWTRFPLWENGHQELRKHRSL*GVSQRQ
Trigger: CTGACGTTGTGATACGCCCCACAGAGATCTATGTTT...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCACTGCTTATCATCGATaGGGTTCTGGGCATAAACTC +
Preference number: 4 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLTAYHR*GSGHKL
Trigger: GAGTTTATGCCCAGAACCTCATCGATGATAAGCAGT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACAGCTGGGGGTTTCCCTaGATGGTACAACATCCGAGT +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDSWGFP*MVQHPS
Trigger: ACTCGGATGTTGTACCATTCAGGGAAACCCCCAGCT...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCCCCGTTCACCTCGATaGGGAAGTCTCCCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIPRSPR*GSLPCA
Trigger: TGCGCACGGGAGACTTCCTCATCGAGGTGAACGGGG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTGGGGAGAGACCCTGTaGGGAAGATGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIWGETL*GRWLRW
Trigger: CCACCGCAGCCATCTTCCTCACAGGGTCTCTCCCCA...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTCCAGATGCTGCACGTaGCCAAAGCGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNISRCCT*PKRQAW
Trigger: CCAGGCCTGCCGCTTTGGGCACGTGCAGCATCTGGA...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCAGGGTCCAGCAGGCTaGCCAGGCCACCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIQGPAG*PGHQLV
Trigger: AACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCGACACCGAGCTGCTaGGATGGGCGACTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHSTPSC*DGRLLG
Trigger: GCCAAGAAGTCGCCCATCGCAGCAGCTCGGTGTCGA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGCTCGCCTAGGTGGATaGTCTCCAGCCAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIARLGG*SPASRP
Trigger: TGGGCGACTGGCTGGAGAGCATCCACCTAGGCGAGC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAATGGCCACCAGGAGCTaGGAAGGAGGTGGTCACGCT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQMATRS*EGGGHA
Trigger: AGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCAT...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCAGCTTCTCTGGGCCTaGGAGGCCCTGGCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHQLLWA*EALAFK
Trigger: TTTGAACGCCAGGGCCTCCCAGGCCCAGAGAAGCTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATAACGATGAGGCCAGCTaGCCGCTGCAGGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHNDEAS*PLQGCV
Trigger: GACACATCCCTGCAGCGGCCAGCTGGCCTCATCGTT...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGGTCTCCTCATCGCTaGACGACAGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHWSPHR*TTAGQV
Trigger: CACCTGCCCAGCTGTCGTCCAGCGATGAGGAGACCA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATGCGCTGCGCTGAAATaGAGCTCAGCTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQCAALK*SSAHRG
Trigger: GCCTCGGTGAGCTGAGCTCCATTTCAGCGCAGCGCA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGCGCCTTCTATCTCATaGTCCTCGAAGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHAPSIS*SSKRSR
Trigger: CCGCGACCGCTTCGAGGACCATGAGATAGAAGGCGC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCACCTGAAGGGTCGGTaGGGCACACTAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHHLKGR*GTLELS
Trigger: GCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
3UTR CAA 72 bp TACTCCCGCGAGGATGAGTCGCACTGTGCCAGGATCTaGTTCAGGTTACGGCTGGACGCAAACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: YSREDESHCARI*FRLRLDANFFM
Trigger: CATGAAGAAGTTTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGCGGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR TCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGGAAAAGCCCATAGTTaGGCGCGTCCTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQGKAHS*ARPGGC
Trigger: ACAGCCTCCAGGACGCGCTCAACTATGGGCTTTTCC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATAATCGCTGTGTGAGGTaGGGCTGTCGTAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHNRCVR*GCRRSP
Trigger: TGGGCTCCTACGACAGCCTCACCTCACACAGCGATT...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCAGACACAACCTTCATaGCGAGGCGGTTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHQTQPS*RGGCHP
Trigger: AGGGTGGCAACCGCCTCGTCATGAAGGTTGTGTCTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACATGTGTCCAGGACGCTaGGGATCATGGACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHMCPGR*GSWTSC
Trigger: ACAAGAAGTCCATGATCCTCAGCGTCCTGGACACAT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGGCAGGAGAGAGCAATaGGAGAGAGAGTTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQGRREQ*ERELAG
Trigger: GCCGGCTAACTCTCTCTCTCATTGCTCTCTCCTGCC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659388.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGCCTGGTGGATCTCCTaGCAGCCATTCTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIAWWIS*QPFSSV
Trigger: CACCGACGAGAATGGCTGGCAGGAGATCCACCAGGC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGTGTCCTTGTTCAGCTaGTGCAGGCGGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIVSLFS*CRRELS
Trigger: GCTCAGCTCCCGCCTGCAGCAGCTGAACAAGGACAC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGTAAGCGCGGGTAGGTaGGCGCCTTCTATCTCATGG +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQVSAGR*APSISW
Trigger: CCATGAGATAGAAGGCGCGCACCTACCCGCGCTTAC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCAAACAGGACGATTCATaGAACATTCCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFKQDDS*NIPGPG
Trigger: GCCCGGGCCAGGAATGTTGCATGAATCGTCCTGTTT...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGGTCCTGACCTCGCATaGTGGACTAGGTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIGPDLA*WTRFPL
Trigger: GAGGGGGAACCTAGTCCAGCATGCGAGGTCAGGACC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGACAGAGCAGCCACATaGAGATGGGCAGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHDRAAT*RWAGES
Trigger: GCTCTCTCCTGCCCATCTGCATGTGGCTGCTCTGTC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659388.1
CDS-3UTR CCA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTACATCCGAGTCTTTGTaGGTCTTGATAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQATSESL*VLITSA
Trigger: TGCAGAGGTTATCAAGACCCACAAAGACTCGGATGT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCTGATGTTGCTCTCCTaGTCGGCATCCCGGTCACGA +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHLMLLS*SASRSR
Trigger: TCGTGACCGGGATGCCGACCAGGAGAGCAACATCAG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCAGCTGTCATGGACTTaGAGCGCAGGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHQLSWT*SAGSVW
Trigger: CCACACTGACCCTGCGCTCCAAGTCCATGACAGCTG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATACAGACTTGGTCCGTaGAATCCCCTTCCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAYRLGP*NPLPQG
Trigger: TCCTTGCGGAAGGGGATTCCACGGACCAAGTCTGTA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCCTCCCCTACAGACTTaGTCCGTGGAATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHPPLQT*SVESPS
Trigger: GGAAGGGGATTCCACGGACCAAGTCTGTAGGGGAGG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCACAGGAATCCAGGCTaGGCTCCGTGGGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIHRNPG*APWGES
Trigger: GCTTTCTCCCCACGGAGCCCAGCCTGGATTCCTGTG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACACAGAAACTTGTGAGTaGCGTGGATGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHTETCE*RGWSLV
Trigger: GACTAAGCTCCATCCACGTCACTCACAAGTTTCTGT...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGGTCTTGATAACCTCTaGAAGCTCAAAGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDGLDNL*KLKVPC
Trigger: GCAGGGAACTTTGAGCTTGCAGAGGTTATCAAGACC...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAAGCTCAAGGTGGACATaGTGGACACCGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSSRWT*WTPWRW
Trigger: CCATCTCCACGGTGTCCAGCATGTCCACCTTGAGCT...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGAAGAGGAGACAGGGTaGTCTCACAGGTACACCCCA +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQEEETG*SHRYTP
Trigger: TGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCAGCTGGACCCAGGGTaGAGGATGGCCTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIQLDPG*RMASDF
Trigger: AAAGTCAGAGGCCATCCTGCACCCTGGGTCCAGCTG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCCTCCCCTACAGACTTaGTCCGTGGAATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIPPLQT*SVESPS
Trigger: GGAAGGGGATTCCACGGACCAAGTCTGTAGGGGAGG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACTCACTGATCACAGTTaGTTTGTCGTCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHALTDHS*FVVFRP
Trigger: GGGCCTGAAGACGACAAACCAACTGTGATCAGTGAG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTGTTCAGGTTACGGCTaGACGCAAACTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDCSGYG*TQTSSW
Trigger: CCATGAAGAAGTTTGCGTCCAGCCGTAACCTGAACA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACAGGTTCGCCTTTGTGTaGAGCTTTGCAAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDRFAFV*SFANCL
Trigger: TAAGCAGTTTGCAAAGCTTCACACAAAGGCGAACCT...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGCTGGACGTAGTCCATaGACTTCTTCAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQAGRSP*TSSGSP
Trigger: AGGCGAACCTGAAGAAGTTCATGGACTACGTCCAGC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAAGCTGGGGGTTTCCCTaGATGGTACAACATCCGAGT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSWGFP*MVQHPS
Trigger: ACTCGGATGTTGTACCATTCAGGGAAACCCCCAGCT...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCCACTTTGTCATCAATaGCATAATCGCTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VRALSNVQGESPSNSKQDPLCHQ*HNRCVR
Trigger: CCTCACACAGCGATTATGTCATTGATGACAAAGTGG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTTTGTGTGGCCGGTATaGGGGACAGACACAAATATC +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFFVWPV*GTDTNI
Trigger: GATATTTGTGTCTGTCCCTCATACCGGCCACACAAA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTCAGGCCGTGTGTCATaGTGCCTCATCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNISGRVS*CLICTS
Trigger: GGAAGTGCAGATGAGGCAGCATGACACACGGCCTGA...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAACATGCTGGACACCGTaGAGATGGTGCTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQTCWTP*RWCLWS
Trigger: AGACCACAAGCACCATCTCCACGGTGTCCAGCATGT...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATACCCAGGGTGCAGGATaGCCTCTGACTTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHTQGAG*PLTFFG
Trigger: TCCAAAGAAAGTCAGAGGCCATCCTGCACCCTGGGT...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACAGGCCCCTGGGTTGTaGAAACTTCTGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAQAPGL*KLLFSF
Trigger: AAAAGAAAACAGAAGTTTTCACAACCCAGGGGCCTG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGCCTCTGACTTTCTTTaGAAGAGGAGACAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQASDFL*KRRQGA
Trigger: AGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGAGGC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CCA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCAAACATAGATCTCTGTaGGGCGTATCACAACGTCAG +
Preference number: 4 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFKHRSL*GVSQRQ
Trigger: CTGACGTTGTGATACGCCCCACAGAGATCTATGTTT...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCCATACAAAAGGAGGTaGAGCGGAACTGACCCTGTA +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIPYKRR*SGTDPV
Trigger: TACAGGGTCAGTTCCGCTTCACCTCCTTTTGTATGG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATTTGTGTGGCCGGTATaGGGGACAGACACAAATATC +
Preference number: 4 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQFVWPV*GTDTNI
Trigger: GATATTTGTGTCTGTCCCTCATACCGGCCACACAAA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR TCA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCCACTTTGTCATCAATaGCATAATCGCTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHPLCHQ*HNRCVR
Trigger: CCTCACACAGCGATTATGTCATTGATGACAAAGTGG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR GCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGGTCTTGATAACCTCTaGAAGCTCAAAGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIGLDNL*KLKVPC
Trigger: GCAGGGAACTTTGAGCTTGCAGAGGTTATCAAGACC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR TCA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCAGGCCCCTGGGTTGTaGAAACTTCTGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIQAPGL*KLLFSF
Trigger: AAAAGAAAACAGAAGTTTTCACAACCCAGGGGCCTG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS TCA 90 bp GCGGCCGGGTCCAGGCGCAGGCACTTCTGCAGCGGAGCGGGCTCGTaGGCTCAGGTCCCGGGAGCGCGGACCCGCCCCGCCGGCCCCATG +
Preference number: 5 (lower is better)
Translates to: AAGSRRRHFCSGAGS*AQVPGARTRPAGPM
Trigger: CATGGGGCCGGCGGGGCGGGTCCGCGCTCCCGGGACCTGAGCTCACGAGCCCGCTCCGCTGCAGAAGTGCCTGCGCCTGGACCCGGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262795.6
CDS-3UTR CAA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCTGGGCTCCTGCCCGTaGCTGGTGGCGTGCACAACG +
Preference number: 5 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRLGSCP*LVACTT
Trigger: CGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCAG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS GCA 90 bp TTGAGCGCGTCCTGGAGGCTGTGGTTGAGGGCGCAGAGCACGCGCTaGTTGGCGGCCCACACGGGCGCGGCCGGGTCCAGGCGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LSASWRLWLRAQSTR*LAAHTGAAGSRRRH
Trigger: GTGCCTGCGCCTGGACCCGGCCGCGCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCTGCGCCCTCAACCACAGCCTCCAGGACGCGCTCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS-3UTR CAA 90 bp GTCTCCCAGGCCGGCTGGTCCCGCGGGTGCACAGCAGGACCCGCGGCCTGCCGCCACCCTCGGGGGTCTTaGACTCTCCCCAGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: VSQAGWSRGCTAGPAACRHPRGS*TLPRAC
Trigger: ACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGTG...GCGGCAGGCCGCGGGTCCTGCTGTGCACCCGCGGGACCAGCCGGCCTGGGAGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCTCCTGGAGGCTGTGGTaGAGGGCGCAGAGCACGCGC +
Preference number: 5 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLSWRLW*RAQSTR
Trigger: GCGCGTGCTCTGCGCCCTCAACCACAGCCTCCAGGA...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp CCCCAGGCTCGGGCCGCTGACCAACGGCTTCAGGGCAGACACCGGGGAGGGCAGGGCGCGGGGCTGATCTaGCTTTGGCCGGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: PQARAADQRLQGRHRGGQGAGLI*LWPALP
Trigger: AGGCAGGGCCGGCCAAAGCAAGATCAGCCCCGCGCC...CTGCCCTCCCCGGTGTCTGCCCTGAAGCCGTTGGTCAGCGGCCCGAGCCTGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp CCCTTGTGGGGCCAGGGTGTGGTCAGCCAAGCCACGGGCCTGGGCTGGGCCTGGTGTCTGGCCGCAGCGTaGGCTCTGCGGCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PLWGQGVVSQATGLGWAWCLAAA*ALRRLP
Trigger: TGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACA...CCAGGCCCAGCCCAGGCCCGTGGCTTGGCTGACCACACCCTGGCCCCACAAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTCCGTGGAGATGGTGCTaGTGGTCTCCAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: QPLHPLQRRGLHRARGASPWRWC*WSPGGG
Trigger: ACCCCCACCTGGAGACCACAAGCACCATCTCCACGG...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATGCGATGGGCGACTTCTaGGCAGGGTCCAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDAMGDF*AGSSRL
Trigger: CAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGC...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCTTGCGGCGCTGCGGCTaGGACGGAGCGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGLRRCG*DGAKRL
Trigger: CAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCAA...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGGCGGGGGTCGAGGGGCGTCGCCCGACTCGGGCGCCGAGTCCTGCAGGATGATTCCACGAAGTCGTCCTaGGTAAGCGCGGGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: GRGSRGVARLGRRVLQDDSTKSS*VSAGRC
Trigger: GCACCTACCCGCGCTTACCAAGGACGACTTCGTGGA...ATCATCCTGCAGGACTCGGCGCCCGAGTCGGGCGACGCCCCTCGACCCCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS CCA 90 bp GAAGCCCCCAGGTCCAGCAGGGTCGTCAGTGCTGCCGCATTCCGCTaGCGTGTGGCACAGTGCACGGCAGTGAGCCCATCGCGAGTGCGG +
Preference number: 5 (lower is better)
Translates to: EAPRSSRVVSAAAFR*RVAQCTAVSPSRVR
Trigger: CCGCACTCGCGATGGGCTCACTGCCGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGCACTGACGACCCTGCTGGACCTGGGGGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS-3UTR CAA 90 bp ACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCCGCGGGAAGCGCCCTTCCAGCTGGTGGGCCTCTGTTaGACGGTGGCGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLAHRVLHRGAPREAPFQLVGLC*TVAALE
Trigger: CTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAG...CTGGAAGGGCGCTTCCCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCGCCAGCAGGACCCCGTaGGCAAACTCTTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGASRTP*ANSSGG
Trigger: ACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGGC...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGCCCCTCCACCCGCTCCAGCGACGCGGGCTTCACCGGGCTCGGGGCGCGTCTCACTGTGCCAGGATCTaGTTCAGGTTACGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QPLHPLQRRGLHRARGASHCARI*FRLRLD
Trigger: GTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTG...AGACGCGCCCCGAGCCCGGTGAAGCCCGCGTCGCTGGAGCGGGTGGAGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS TCA 90 bp GCGGGATCTCGCCTTCACCCTGCGGGCTGTGCGCCTTCACGGCGATaGACTTGCGGCCGGGGACGGCGCTGTAAAGTTTCCGCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: AGSRLHPAGCAPSRR*TCGRGRRCKVSASG
Trigger: GCCCGAAGCGGAAACTTTACAGCGCCGTCCCCGGCCGCAAGTTCATCGCCGTGAAGGCGCACAGCCCGCAGGGTGAAGGCGAGATCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
ENST00000673995.1
CDS GCA 90 bp GCCGAGCTGCTGCGATGGGCGACTTCTTGGCAGGGTCCAGCAGGCTaGCCAGGCCACCAACTGGTTCCTCCCCCAGGGAACGCGTGTCCT +
Preference number: 5 (lower is better)
Translates to: AELLRWATSWQGPAG*PGHQLVPPPGNACP
Trigger: AGGACACGCGTTCCCTGGGGGAGGAACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445220.5
CDS-3UTR CAA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCTTCACCAGGGGGCTCTaGCGGCGCTGCGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSFTRGL*RRCGLD
Trigger: GTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAA...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCGGGGGCGGGATGCCGCGACCCTCGCGCACCGGGTCTTGCATCGAGGTGCTCAGGATCATGGACTTCTaGTCCTCGGGTGACTTCCGC +
Preference number: 5 (lower is better)
Translates to: GGGGMPRPSRTGSCIEVLRIMDF*SSGDFR
Trigger: GCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCT...GAGCACCTCGATGCAAGACCCGGTGCGCGAGGGTCGCGGCATCCCGCCCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp ACGCTGCGCACCACGAAGCGCACCTCCTTGGGCTCGTGCGGGATGGAGAGGCTGTCGCCCACGTCGAACTaGCTCCAGAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TLRTTKRTSLGSCGMERLSPTSN*LQSCSG
Trigger: GCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCGA...CAGCCTCTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGTGGTGCGCAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCTCCACGAAGTCGTCCTaGGTAAGCGCGGGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGSTKSS*VSAGRC
Trigger: GCACCTACCCGCGCTTACCAAGGACGACTTCGTGGA...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGCCACCAGGAGCTGCGAAGGAGGTGGTCACGCTAGGGCACCCCACCCCCGGCAAGAAGAGGGAGGCCTaGGACCTCCTGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WPPGAAKEVVTLGHPTPGKKREA*DLLSSS
Trigger: GCTGCTGGACAGGAGGTCCAAGGCCTCCCTCTTCTT...GCCGGGGGTGGGGTGCCCTAGCGTGACCACCTCCTTCGCAGCTCCTGGTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS TCA 90 bp TGCGGCCTTTCACGGTTCCCTCCCAGAAACCGCCCTCCCCAATGCTaGGCACCTTCACGGCCTCGCCGCGGTGCAGCGGGATCTCGCCTT +
Preference number: 5 (lower is better)
Translates to: CGLSRFPPRNRPPQC*APSRPRRGAAGSRL
Trigger: AAGGCGAGATCCCGCTGCACCGCGGCGAGGCCGTGAAGGTGCTCAGCATTGGGGAGGGCGGTTTCTGGGAGGGAACCGTGAAAGGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 90 bp CGAGAGCTCGGGGTCATCGTGCTGTGGCCAGTGGGTGAGGCCACGTaGTGCACCAGCTGGGCTGTTTCCACCTCAGCCGGCCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RELGVIVLWPVGEAT*CTSWAVSTSAGPEA
Trigger: AGCCTCAGGGCCGGCTGAGGTGGAAACAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000673995.1
ENST00000674010.1
ENST00000674145.1
CDS TCA 90 bp GGGTCACTGCCGAGAGCTCGGGGTCATCGTGCTGTGGCCAGTGGGTaGGGCCACGTGATGCACCAGCTGGGCTGTTTCCACCTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GSLPRARGHRAVASG*GHVMHQLGCFHLSR
Trigger: CCGGCTGAGGTGGAAACAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCGGCAGTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000673995.1
ENST00000674010.1
ENST00000674145.1
CDS GCA 90 bp AGCAGGGTCGTCAGTGCTGCCGCATTCCGCTGGCGTGTGGCACAGTaGACGGCAGTGAGCCCATCGCGAGTGCGGAAGTCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SRVVSAAAFRWRVAQ*TAVSPSRVRKSRWA
Trigger: TGCCCACCTGGACTTCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGCACTGACGACCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS GCA 90 bp TCTGTCACCCACCCAGGGGTCACTGCCGAGAGCTCGGGGTCATCGTaGTGTGGCCAGTGGGTGAGGCCACGTGATGCACCAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SVTHPGVTAESSGSS*CGQWVRPRDAPAGL
Trigger: CAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCGGCAGTGACCCCTGGGTGGGTGACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674145.1
CDS CCA 90 bp TCAACCTCACAGTTGCTATGGCAACCCCGGCCTCCAGGCAGCTGCTaGCGGTGTAGGGAAGGAGGGCTCTGCCACGCCAGGGGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: STSQLLWQPRPPGSC*RCREGGLCHARGSA
Trigger: CGCAGAGCCCCTGGCGTGGCAGAGCCCTCCTTCCCTACACCGCCAGCAGCTGCCTGGAGGCCGGGGTTGCCATAGCAACTGTGAGGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGTGTCTGGCCGCAGCGTaGGCTCTGCGGCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQCLAAA*ALRRLP
Trigger: TGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACA...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGCCTCCAGGCCGGGCTaGAAGCTGGAGCGCACCGTG +
Preference number: 5 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQASRPG*KLERTV
Trigger: CACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGGC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS CCA 90 bp CCAGGGGTCACTGCCGAGAGCTCGGGGTCATCGTGCTGTGGCCAGTaGGTGAGGCCACGTGATGCACCAGCTGGGCTGTTTCCACCTCAG +
Preference number: 5 (lower is better)
Translates to: PGVTAESSGSSCCGQ*VRPRDAPAGLFPPQ
Trigger: CTGAGGTGGAAACAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCCGAGCTCTCGGCAGTGACCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000673995.1
ENST00000674010.1
ENST00000674145.1
CDS-3UTR CAA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGAGCAGGTCCGTGGCGTaGTCCAGCTGGGCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQSRSVA*SSWAAR
Trigger: CCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCT...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp CTTCGTCCGGTCCTCCCGCGTTTCAGGCCGTGTGTCATGCTGCCTCATCTGCACTTCACGGCGATGAACTaGCGGCCGGGGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LRPVLPRFRPCVMLPHLHFTAMN*RPGTAL
Trigger: CAGCGCCGTCCCCGGCCGCAAGTTCATCGCCGTGAA...GTGCAGATGAGGCAGCATGACACACGGCCTGAAACGCGGGAGGACCGGACGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR CAA 90 bp CATCCACAAACAGGGGTCCGGGGCGGTCGGCGTCGGGACTGTGCACGGGTGTGGTTCATGACGAGGCGGTaGCCACCCTGGCGAATCAGA +
Preference number: 5 (lower is better)
Translates to: HPQTGVRGGRRRDCARVWFMTRR*PPWRIR
Trigger: TCTGATTCGCCAGGGTGGCAACCGCCTCGTCATGAA...CCACACCCGTGCACAGTCCCGACGCCGACCGCCCCGGACCCCTGTTTGTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCGCCTCCAGGCCGGGCTaGAAGCTGGAGCGCACCGTG +
Preference number: 5 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLASRPG*KLERTV
Trigger: CACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGGC...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGTGCTGCTGGGCCATGAGCTCGCTGTCCGAGGACTGCTTCAGCAGCGGGTCCAGCGGGGACTTGAGCTaGGGCTTGGGAGGCACTGGT +
Preference number: 5 (lower is better)
Translates to: WCCWAMSSLSEDCFSSGSSGDLS*GLGGTG
Trigger: ACCAGTGCCTCCCAAGCCCAAGCTCAAGTCCCCGCT...GGACCCGCTGCTGAAGCAGTCCTCGGACAGCGAGCTCATGGCCCAGCAGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTTCCCCAGCGGGGACTaGAGCTTGGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GRPVRALSNVQGESPSNSFPSGD*SLGLGG
Trigger: GCCTCCCAAGCCCAAGCTCAAGTCCCCGCTGGGGAA...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACACGAAGCGCACCTCCTaGGGCTCGTGCGGGATGGAG +
Preference number: 5 (lower is better)
Translates to: AGRPVRALSNVQGESPSNTKRTS*GSCGME
Trigger: CTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAACGAAGCGCACCTCCTaGGGCTCGTGCGGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRTKRTS*GSCGME
Trigger: CTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGT...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACTCGCCCACGTCGAACTaGCTCCAGAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHSPTSN*LQSCSG
Trigger: GCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCGA...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CTCCCACCACGAGCAGCACCTGAAGGGTCGGTGGGGCACACTAGAGCTCAGCGAAGGTGCAGGTGCCACTaGCGCTCCACCGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: LPPRAAPEGSVGHTRAQRRCRCH*RSTAWI
Trigger: GATCCAGGCGGTGGAGCGCAAGTGGCACCTGCACCT...TCGCTGAGCTCTAGTGTGCCCCACCGACCCTTCAGGTGCTGCTCGTGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS TCA 90 bp TCAGTGCTGCCGCATTCCGCTGGCGTGTGGCACAGTGCACGGCAGTaGGCCCATCGCGAGTGCGGAAGTCCAGGTGGGCACCACCATTCT +
Preference number: 5 (lower is better)
Translates to: SVLPHSAGVWHSARQ*AHRECGSPGGHHHS
Trigger: AGAATGGTGGTGCCCACCTGGACTTCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGCACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS-3UTR CAA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCAGAGCACGCGCTGCTaGGCGGCCCACACGGGCGCG +
Preference number: 5 (lower is better)
Translates to: VRALSNVQGESPSNSKQDQSTRC*AAHTGA
Trigger: CGCGCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCTG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCTCCTGGAGGCTGTGGTaGAGGGCGCAGAGCACGCGC +
Preference number: 5 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSWRLW*RAQSTR
Trigger: GCGCGTGCTCTGCGCCCTCAACCACAGCCTCCAGGA...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAGCAGGTCCGTGGCGTaGTCCAGCTGGGCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSRSVA*SSWAAR
Trigger: CCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGCCTCCCCCTTCAGGTaGATATCGCTGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: GRPVRALSNVQGESPSNSASPFR*ISLAER
Trigger: GCGCTCAGCCAGCGATATCAACCTGAAGGGGGAGGC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCACGATCTTTCTCCTCTaGCAGCCGCTGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSTIFLL*QPLEQQ
Trigger: CTGCTGCTCCAGCGGCTGCAAGAGGAGAAAGATCGT...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCTGGTGGGCCTCTGTTaGACGGTGGCGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQLVGLC*TVAALE
Trigger: CTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAG...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACCCGTGGAGATGGTGCTaGTGGTCTCCAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHPWRWC*WSPGGG
Trigger: ACCCCCACCTGGAGACCACAAGCACCATCTCCACGG...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGGCGATGGGCGACTTCTaGGCAGGGTCCAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: WAAGEGTKQCTGRVSEQQAMGDF*AGSSRL
Trigger: CAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGC...CTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAAGCTAGCCCCCTCCTaGGGGAGAGACCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: AGRPVRALSNVQGESPSNKLAPS*GRDPVR
Trigger: CCTCACAGGGTCTCTCCCCAAGGAGGGGGCTAGCTT...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS CCA 90 bp AGTCCAGGTGGGCACCACCATTCTTCAGCACCTTTAGCAGGTCCGTaGCGTTGTCCAGCTGGGCTGCGAGGCTCAGGGGGCACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPGGHHHSSAPLAGP*RCPAGLRGSGGTLL
Trigger: CAGGAGAGTGCCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGGTGCTGAAGAATGGTGGTGCCCACCTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CCA 90 bp CCTCCGACAATAAGCAGCGCGGCAGCGTCAACCTCACAGTTGCTATaGCAACCCCGGCCTCCAGGCAGCTGCTGGCGGTGTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PPTISSAAASTSQLL*QPRPPGSCWRCREG
Trigger: TCCTTCCCTACACCGCCAGCAGCTGCCTGGAGGCCGGGGTTGCCATAGCAACTGTGAGGTTGACGCTGCCGCGCTGCTTATTGTCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACTCGCGCACCGGGTCTaGCATCGAGGTGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRLAHRV*HRGAPR
Trigger: CCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCCTGATCACAGTTGGTTaGTCGTCTTCAGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSLITVG*SSSGPG
Trigger: CCCTGGGCCTGAAGACGACAAACCAACTGTGATCAG...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp GCTGGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACTCCACGAAGTCGTCCTaGGTAAGCGCGGGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: AGRPVRALSNVQGESPSNSTKSS*VSAGRC
Trigger: GCACCTACCCGCGCTTACCAAGGACGACTTCGTGGA...GTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCGCGTCAACCTCACAGTaGCTATGGCAACCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: GRPVRALSNVQGESPSNSASTSQ*LWQPRP
Trigger: AGGCCGGGGTTGCCATAGCAACTGTGAGGTTGACGC...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS CCA 90 bp CCACCATTCTTCAGCACCTTTAGCAGGTCCGTGGCGTTGTCCAGCTaGGCTGCGAGGCTCAGGGGGCACTCTCCTGAGTCAGGGTCATGG +
Preference number: 5 (lower is better)
Translates to: PPFFSTFSRSVALSS*AARLRGHSPESGSW
Trigger: CCATGACCCTGACTCAGGAGAGTGCCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGGTGCTGAAGAATGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CCA 90 bp GCACAGTGCACGGCAGTGAGCCCATCGCGAGTGCGGAAGTCCAGGTaGGCACCACCATTCTTCAGCACCTTTAGCAGGTCCGTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: AQCTAVSPSRVRKSR*APPFFSTFSRSVAL
Trigger: CAACGCCACGGACCTGCTAAAGGTGCTGAAGAATGGTGGTGCCCACCTGGACTTCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CCA 90 bp CTTTGGCCGGCCCTGCCTGCTAAAGGGCCACTGATGTTGCTCTCCTaGTCGGCATCCCGGTCACGATCTTTCTCCTCTTGCAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LWPALPAKGPLMLLS*SASRSRSFSSCSRW
Trigger: CCAGCGGCTGCAAGAGGAGAAAGATCGTGACCGGGATGCCGACCAGGAGAGCAACATCAGTGGCCCTTTAGCAGGCAGGGCCGGCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS-3UTR CAA 90 bp GGGCGGCCGGTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCACGATCTTTCTCCTCTaGCAGCCGCTGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GRPVRALSNVQGESPSNSTIFLL*QPLEQQ
Trigger: CTGCTGCTCCAGCGGCTGCAAGAGGAGAAAGATCGT...GCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCACCGGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp TCCAGAGCGGCCCCTGGTGGCCACTCAGTAATCAGGCACACACACGGCTCCCACAAAGGGCCACTGATGTaGCTCTCCTGGTCGGCATCC +
Preference number: 5 (lower is better)
Translates to: SRAAPGGHSVIRHTHGSHKGPLM*LSWSAS
Trigger: GGATGCCGACCAGGAGAGCAACATCAGTGGCCCTTT...GTGGGAGCCGTGTGTGTGCCTGATTACTGAGTGGCCACCAGGGGCCGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTGTCTGGCCGCAGCGTaGGCTCTGCGGCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHCLAAA*ALRRLP
Trigger: TGGCAGCCGCCGCAGAGCCAACGCTGCGGCCAGACA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACCTCGCGCACCGGGTCTaGCATCGAGGTGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHLAHRV*HRGAPR
Trigger: CCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAG...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATTGCGGCGCTGCGGCTaGGACGGAGCGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRLRRCG*DGAKRL
Trigger: CAGCCTCTTCGCTCCGTCCAAGCCGCAGCGCCGCAA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAGCGGGGACTTGAGCTaGGGCTTGGGAGGCACTGGT +
Preference number: 5 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLSGDLS*GLGGTG
Trigger: ACCAGTGCCTCCCAAGCCCAAGCTCAAGTCCCCGCT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAGGGAACGCGTGTCCTaGTTCAGCTGCTGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLRERVS*FSCCRR
Trigger: CCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTAGCCCCCTCAAGCTAGCCCCCTCCTaGGGGAGAGACCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: GGFSAVVAQEHGDQASPLKLAPS*GRDPVR
Trigger: CCTCACAGGGTCTCTCCCCAAGGAGGGGGCTAGCTT...GAGGGGGCTAGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGGCGCGGGGCTGATCTaGCTTTGGCCGGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFGAGLI*LWPALP
Trigger: AGGCAGGGCCGGCCAAAGCAAGATCAGCCCCGCGCC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTTCACGGCGATGAACTaGCGGCCGGGGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VRALSNVQGESPSNSKQDFTAMN*RPGTAL
Trigger: CAGCGCCGTCCCCGGCCGCAAGTTCATCGCCGTGAA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCGGTGGCCACTGCCCCTaGTGGGGCCAGGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFGGHCP*WGQGVV
Trigger: GACCACACCCTGGCCCCACAAGGGGCAGTGGCCACC...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCAGAGCACGCGCTGCTaGGCGGCCCACACGGGCGCG +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIQSTRC*AAHTGA
Trigger: CGCGCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCTG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp CCTGGGCCCAGGCTGTGCCGCGTCGTCGCGGGGAGAAGACGCTTTTCCTCTTCCGAGTCTTTGTGGGTCTaGATAACCTCTGCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: PGPRLCRVVAGRRRFSSSESLWV*ITSASS
Trigger: TGAGCTTGCAGAGGTTATCAAGACCCACAAAGACTC...GGAAGAGGAAAAGCGTCTTCTCCCCGCGACGACGCGGCACAGCCTGGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTTCACGGCGATGAACTaGCGGCCGGGGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFFTAMN*RPGTAL
Trigger: CAGCGCCGTCCCCGGCCGCAAGTTCATCGCCGTGAA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACCTGGTGGGCCTCTGTTaGACGGTGGCGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VRALSNVQGESPSNSKQDLVGLC*TVAALE
Trigger: CTCCAGAGCCGCCACCGTCAAACAGAGGCCCACCAG...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACCGTGGAGATGGTGCTaGTGGTCTCCAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRPWRWC*WSPGGG
Trigger: ACCCCCACCTGGAGACCACAAGCACCATCTCCACGG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACACGAAGCGCACCTCCTaGGGCTCGTGCGGGATGGAG +
Preference number: 5 (lower is better)
Translates to: VRALSNVQGESPSNSKQDTKRTS*GSCGME
Trigger: CTCCATCCCGCACGAGCCCAAGGAGGTGCGCTTCGT...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TTTCAGGCCGTGTGTCATGCTGCCTCATCTGCACTTCCTCCACGCAGTCGGCCGCAGAATGAGAGGGGTTaGTCATGGCACGCGATCCCC +
Preference number: 5 (lower is better)
Translates to: FQAVCHAASSALPPRSRPQNERG*SWHAIP
Trigger: GGGGATCGCGTGCCATGACAAACCCCTCTCATTCTG...CGGCCGACTGCGTGGAGGAAGTGCAGATGAGGCAGCATGACACACGGCCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673995.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAAACAGGCGTGCCACCTaGTCCGTGCTATGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRNRRAT*SVLCSW
Trigger: CCAGCTGCATAGCACGGACAAGGTGGCACGCCTGTT...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAAAACAGGCGTGCCACCTaGTCCGTGCTATGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQNRRAT*SVLCSW
Trigger: CCAGCTGCATAGCACGGACAAGGTGGCACGCCTGTT...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp CCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAGCATGGGGACCAAGCTATGGGGGTCTCTGCTTaGGCTCCCCGGAGCACAAAA +
Preference number: 5 (lower is better)
Translates to: PRQGGFSAVVAQEHGDQAMGVSA*APRSTK
Trigger: TTTTGTGCTCCGGGGAGCCAAAGCAGAGACCCCCAT...AGCTTGGTCCCCATGCTCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACTCGCGCACCGGGTCTaGCATCGAGGTGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQLAHRV*HRGAPR
Trigger: CCGCGGAGCACCTCGATGCAAGACCCGGTGCGCGAG...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACGCCAGCAGGACCCCGTaGGCAAACTCTTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHASRTP*ANSSGG
Trigger: ACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGGC...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTCGCCCACGTCGAACTaGCTCCAGAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSPTSN*LQSCSG
Trigger: GCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCGA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCCACCCTCGGGGGTCTTaGACTCTCCCCAGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFHPRGS*TLPRAC
Trigger: ACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGTG...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGGTGGCCACTGCCCCTaGTGGGGCCAGGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQGGHCP*WGQGVV
Trigger: GACCACACCCTGGCCCCACAAGGGGCAGTGGCCACC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGAAAAGGGCCACTGATGTaGCTCTCCTGGTCGGCATCC +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRKGPLM*LSWSAS
Trigger: GGATGCCGACCAGGAGAGCAACATCAGTGGCCCTTT...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTGCCTCCAGGCCGGGCTaGAAGCTGGAGCGCACCGTG +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIASRPG*KLERTV
Trigger: CACGGTGCGCTCCAGCTTCAAGCCCGGCCTGGAGGC...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTCACCAGGGGGCTCTaGCGGCGCTGCGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHFTRGL*RRCGLD
Trigger: GTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCTGGGCTCCTGCCCGTaGCTGGTGGCGTGCACAACG +
Preference number: 5 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHLGSCP*LVACTT
Trigger: CGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCAG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCTGGGCTCCTGCCCGTaGCTGGTGGCGTGCACAACG +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHLGSCP*LVACTT
Trigger: CGTTGTGCACGCCACCAGCAACGGGCAGGAGCCCAG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTAGGGGCGTGTCCAGGTaGGGCGGGTACTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIRGVSR*GGYSCR
Trigger: CCTGCAGGAGTACCCGCCCAACCTGGACACGCCCCT...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GTGAGGGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACTCCTCCCCTACAGACTaGGTCCGTGGAATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: VRALSNVQGESPSNSKQDSSPTD*VRGIPF
Trigger: GAAGGGGATTCCACGGACCAAGTCTGTAGGGGAGGA...GTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATGCACACTCCTCCCCTACAGACTaGGTCCGTGGAATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: FFGRGDRVLSQVHPTHAHSSPTD*VRGIPF
Trigger: GAAGGGGATTCCACGGACCAAGTCTGTAGGGGAGGA...GTGTGCATGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTTCACCAGGGGGCTCTaGCGGCGCTGCGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIFTRGL*RRCGLD
Trigger: GTCCAAGCCGCAGCGCCGCAAGAGCCCCCTGGTGAA...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTTCCCCAGCGGGGACTaGAGCTTGGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHFPSGD*SLGLGG
Trigger: GCCTCCCAAGCCCAAGCTCAAGTCCCCGCTGGGGAA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGACTGATCACAGTTGGTTaGTCGTCTTCAGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRLITVG*SSSGPG
Trigger: CCCTGGGCCTGAAGACGACAAACCAACTGTGATCAG...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATGCGATGGGCGACTTCTaGGCAGGGTCCAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHAMGDF*AGSSRL
Trigger: CAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGC...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCGCCCACGTCGAACTaGCTCCAGAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHSPTSN*LQSCSG
Trigger: GCCGCTGCAGCTCTGGAGCAAGTTCGACGTGGGCGA...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAAGAAGAGGGAGGCCTaGGACCTCCTGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAKKREA*DLLSSS
Trigger: GCTGCTGGACAGGAGGTCCAAGGCCTCCCTCTTCTT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAGCCTCCCCCTTCAGGTaGATATCGCTGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQASPFR*ISLAER
Trigger: GCGCTCAGCCAGCGATATCAACCTGAAGGGGGAGGC...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTTCATGACGAGGCGGTaGCCACCCTGGCGAATCAGA +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFFMTRR*PPWRIR
Trigger: TCTGATTCGCCAGGGTGGCAACCGCCTCGTCATGAA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATCAGCTGTCATGGACTaGGAGCGCAGGGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SDFLWKRRQGALTGTPHASAVMD*ERRVSV
Trigger: CACACTGACCCTGCGCTCCAAGTCCATGACAGCTGA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCTCAGCTGTCATGGACTaGGAGCGCAGGGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFSAVMD*ERRVSV
Trigger: CACACTGACCCTGCGCTCCAAGTCCATGACAGCTGA...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATCCTCCCCTACAGACTaGGTCCGTGGAATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SDFLWKRRQGALTGTPHASSPTD*VRGIPF
Trigger: GAAGGGGATTCCACGGACCAAGTCTGTAGGGGAGGA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGCCAGCAGGACCCCGTaGGCAAACTCTTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHASRTP*ANSSGG
Trigger: ACCCCCTGAAGAGTTTGCCAACGGGGTCCTGCTGGC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAAGCGGGGACTTGAGCTaGGGCTTGGGAGGCACTGGT +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSGDLS*GLGGTG
Trigger: ACCAGTGCCTCCCAAGCCCAAGCTCAAGTCCCCGCT...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATAGGGAACGCGTGTCCTaGTTCAGCTGCTGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHRERVS*FSCCRR
Trigger: CCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCT...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAAAGGGAACGCGTGTCCTaGTTCAGCTGCTGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQRERVS*FSCCRR
Trigger: CCGCCTGCAGCAGCTGAACAAGGACACGCGTTCCCT...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTCACCCTCGGGGGTCTTaGACTCTCCCCAGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIHPRGS*TLPRAC
Trigger: ACAGGCCCTGGGGAGAGTCAAAGACCCCCGAGGGTG...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCAAGGATCATGGACTTCTaGTCCTCGGGTGACTTCCGC +
Preference number: 5 (lower is better)
Translates to: SDFLWKRRQGALTGTPHARIMDF*SSGDFR
Trigger: GCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCT...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATCCACGAAGTCGTCCTaGGTAAGCGCGGGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSTKSS*VSAGRC
Trigger: GCACCTACCCGCGCTTACCAAGGACGACTTCGTGGA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000659388.1
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTAAGCTAGCCCCCTCCTaGGGGAGAGACCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIKLAPS*GRDPVR
Trigger: CCTCACAGGGTCTCTCCCCAAGGAGGGGGCTAGCTT...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAATCAGCTGTCATGGACTaGGAGCGCAGGGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: KQCTGRVSEQQQTGRFMQSAVMD*ERRVSV
Trigger: CACACTGACCCTGCGCTCCAAGTCCATGACAGCTGA...TTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CTCGCATGCTGGACTAGGTTCCCCCTCTGGGAGAATGGCCACCAGGAGCTGCGATACGGACAGAGATATTaGTTCCTTTTCTCGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LACWTRFPLWENGHQELRYGQRY*FLFSFQ
Trigger: TTGGAACGAGAAAAGGAACAAATATCTCTGTCCGTA...TCGCAGCTCCTGGTGGCCATTCTCCCAGAGGGGGAACCTAGTCCAGCATGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp CAGGAGACTTTGGGGTCCAAGGCAGGGAGGCTTCTCTGCTGTAGTTGCCCAAGATCTTCAGGTTCGCCTTaGTGTGAAGCTTTGCAAACT +
Preference number: 5 (lower is better)
Translates to: QETLGSKAGRLLCCSCPRSSGSP*CEALQT
Trigger: AGTTTGCAAAGCTTCACACAAAGGCGAACCTGAAGA...TCTTGGGCAACTACAGCAGAGAAGCCTCCCTGCCTTGGACCCCAAAGTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp GCGAGGATGAGTCGCACTGTGCCAGGATCTTGTTCAGGTTACGGCTGGACGCAAACAACATCCGAGTCTTaGTGGGTCTTGATAACCTCT +
Preference number: 5 (lower is better)
Translates to: ARMSRTVPGSCSGYGWTQTTSES*WVLITS
Trigger: AGAGGTTATCAAGACCCACAAAGACTCGGATGTTGT...TTGCGTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTGCGACTCATCCTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTATGGGGGTCTCTGCTTaGGCTCCCCGGAGCACAAAA +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIMGVSA*APRSTK
Trigger: TTTTGTGCTCCGGGGAGCCAAAGCAGAGACCCCCAT...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATCTGATCACAGTTGGTTaGTCGTCTTCAGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHLITVG*SSSGPG
Trigger: CCCTGGGCCTGAAGACGACAAACCAACTGTGATCAG...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCACTGTGCCAGGATCTaGTTCAGGTTACGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHHCARI*FRLRLD
Trigger: GTCCAGCCGTAACCTGAACAAGATCCTGGCACAGTG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp AATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATTAGGATCATGGACTTCTaGTCCTCGGGTGACTTCCGC +
Preference number: 5 (lower is better)
Translates to: NVQGESPSNSKQDDSCNIRIMDF*SSGDFR
Trigger: GCGGAAGTCACCCGAGGACAAGAAGTCCATGATCCT...AATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp GGCACTAAGCAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCACAACATCCGAGTCTTaGTGGGTCTTGATAACCTCT +
Preference number: 5 (lower is better)
Translates to: GTKQCTGRVSEQQQTGRFTTSES*WVLITS
Trigger: AGAGGTTATCAAGACCCACAAAGACTCGGATGTTGT...GAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTGCTTAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCACCTTTGTGTGAAGCTTaGCAAACTGCTTATCATCGA +
Preference number: 5 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAPLCEA*QTAYHR
Trigger: TCGATGATAAGCAGTTTGCAAAGCTTCACACAAAGG...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp CAATGTACAGGGCGAGTCTCCGAGCAACAGCAAACAGGACGATTCATGCAACATGAGTCTTTGTGGGTCTaGATAACCTCTGCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: QCTGRVSEQQQTGRFMQHESLWV*ITSASS
Trigger: TGAGCTTGCAGAGGTTATCAAGACCCACAAAGACTC...ATGTTGCATGAATCGTCCTGTTTGCTGTTGCTCGGAGACTCGCCCTGTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATTCTTCAGGTTCGCCTTaGTGTGAAGCTTTGCAAACT +
Preference number: 5 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHSSGSP*CEALQT
Trigger: AGTTTGCAAAGCTTCACACAAAGGCGAACCTGAAGA...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS-3UTR CAA 90 bp TCTGACTTTCTTTGGAAGAGGAGACAGGGTGCTCTCACAGGTACACCCCACGCATACGGACAGAGATATTaGTTCCTTTTCTCGTTCCAA +
Preference number: 5 (lower is better)
Translates to: SDFLWKRRQGALTGTPHAYGQRY*FLFSFQ
Trigger: TTGGAACGAGAAAAGGAACAAATATCTCTGTCCGTA...TGCGTGGGGTGTACCTGTGAGAGCACCCTGTCTCCTCTTCCAAAGAAAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262795.6
ENST00000664402.1
ENST00000673971.1
CDS-3UTR CAA 90 bp ATGAGGGACAGACACAAATATCCCCTCAAGCAGGCAACTGAGCCATGGCTTCATCCTTTGTGTGAAGCTTaGCAAACTGCTTATCATCGA +
Preference number: 5 (lower is better)
Translates to: MRDRHKYPLKQATEPWLHPLCEA*QTAYHR
Trigger: TCGATGATAAGCAGTTTGCAAAGCTTCACACAAAGG...ATGAAGCCATGGCTCAGTTGCCTGCTTGAGGGGATATTTGTGTCTGTCCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262795.6
ENST00000673971.1
CDS TCA 72 bp TCCAGGCGCAGGCACTTCTGCAGCGGAGCGGGCTCGTaGGCTCAGGTCCCGGGAGCGCGGACCCGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: SRRRHFCSGAGS*AQVPGARTRPA
Trigger: GGCGGGGCGGGTCCGCGCTCCCGGGACCTGAGCTCACGAGCCCGCTCCGCTGCAGAAGTGCCTGCGCCTGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262795.6
CDS GCA 72 bp CCAGGCGCAGGCACTTCGTCTGCTGCAGGTCCGGGATaGCGACGCGCACGACCACGGCGCTGGCCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: PGAGTSSAAGPG*RRARPRRWPRG
Trigger: GCCCCGGGGCCAGCGCCGTGGTCGTGCGCGTCGGCATCCCGGACCTGCAGCAGACGAAGTGCCTGCGCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CAA 90 bp AGCGCGTCCTGGAGGCTGTGGTTGAGGGCGCAGAGCACGCGCTGCTaGGCGGCCCACACGGGCGCGGCCGGGTCCAGGCGCAGGCACTTC +
Preference number: 6 (lower is better)
Translates to: SASWRLWLRAQSTRC*AAHTGAAGSRRRHF
Trigger: GAAGTGCCTGCGCCTGGACCCGGCCGCGCCCGTGTGGGCCGCCAAGCAGCGCGTGCTCTGCGCCCTCAACCACAGCCTCCAGGACGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS GCA 72 bp CCAGGCAGCTGCTGGCGGTGTAGGGAAGGAGGGCTCTaGCACGCCAGGGGCTCTGCGCCGAGCCCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: PGSCWRCREGGL*HARGSAPSPVL
Trigger: GAGGACGGGGCTCGGCGCAGAGCCCCTGGCGTGGCAGAGCCCTCCTTCCCTACACCGCCAGCAGCTGCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS GCA 72 bp CGGTGCAGCGGGATCTCGCCTTCACCCTGCGGGCTGTaGGCCTTCACGGCGATGAACTTGCGGCCGGGGACG +
Preference number: 6 (lower is better)
Translates to: RCSGISPSPCGL*AFTAMNLRPGT
Trigger: CGTCCCCGGCCGCAAGTTCATCGCCGTGAAGGCGCACAGCCCGCAGGGTGAAGGCGAGATCCCGCTGCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
ENST00000673995.1
CDS GCA 72 bp TCCCCAATGCTGAGCACCTTCACGGCCTCGCCGCGGTaGAGCGGGATCTCGCCTTCACCCTGCGGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: SPMLSTFTASPR*SGISPSPCGLC
Trigger: GCACAGCCCGCAGGGTGAAGGCGAGATCCCGCTGCACCGCGGCGAGGCCGTGAAGGTGCTCAGCATTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 72 bp CCGCATTCCGCTGGCGTGTGGCACAGTGCACGGCAGTaGGCCCATCGCGAGTGCGGAAGTCCAGGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: PHSAGVWHSARQ*AHRECGSPGGH
Trigger: GTGCCCACCTGGACTTCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTGCCACACGCCAGCGGAATGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 72 bp TCACGGTTCCCTCCCAGAAACCGCCCTCCCCAATGCTaGGCACCTTCACGGCCTCGCCGCGGTGCAGCGGGA +
Preference number: 6 (lower is better)
Translates to: SRFPPRNRPPQC*APSRPRRGAAG
Trigger: TCCCGCTGCACCGCGGCGAGGCCGTGAAGGTGCTCAGCATTGGGGAGGGCGGTTTCTGGGAGGGAACCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 72 bp CGCCTTCACCCTGCGGGCTGTGCGCCTTCACGGCGATaGACTTGCGGCCGGGGACGGCGCTGTAAAGTTTCC +
Preference number: 6 (lower is better)
Translates to: RLHPAGCAPSRR*TCGRGRRCKVS
Trigger: GGAAACTTTACAGCGCCGTCCCCGGCCGCAAGTTCATCGCCGTGAAGGCGCACAGCCCGCAGGGTGAAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
ENST00000673995.1
CDS TCA 72 bp GGGGTCATCGTGCTGTGGCCAGTGGGTGAGGCCACGTaGTGCACCAGCTGGGCTGTTTCCACCTCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: GVIVLWPVGEAT*CTSWAVSTSAG
Trigger: GCCGGCTGAGGTGGAAACAGCCCAGCTGGTGCATCACGTGGCCTCACCCACTGGCCACAGCACGATGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000673995.1
ENST00000674010.1
ENST00000674145.1
CDS GCA 72 bp GTCAGTGCTGCCGCATTCCGCTGGCGTGTGGCACAGTaGACGGCAGTGAGCCCATCGCGAGTGCGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: VSAAAFRWRVAQ*TAVSPSRVRKS
Trigger: GGACTTCCGCACTCGCGATGGGCTCACTGCCGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGCACTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CCA 72 bp AGGTCCAGCAGGGTCGTCAGTGCTGCCGCATTCCGCTaGCGTGTGGCACAGTGCACGGCAGTGAGCCCATCG +
Preference number: 6 (lower is better)
Translates to: RSSRVVSAAAFR*RVAQCTAVSPS
Trigger: CGATGGGCTCACTGCCGTGCACTGTGCCACACGCCAGCGGAATGCGGCAGCACTGACGACCCTGCTGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CAA 90 bp TCACCGAGGCTGCTGAAGAGCCGAGCTGCTGCGATGGGCGACTTCTaGGCAGGGTCCAGCAGGCTGCCCAGGCCACCAACTGGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SPRLLKSRAAAMGDF*AGSSRLPRPPTGSS
Trigger: GGAGGAACCAGTTGGTGGCCTGGGCAGCCTGCTGGACCCTGCCAAGAAGTCGCCCATCGCAGCAGCTCGGCTCTTCAGCAGCCTCGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445220.5
CDS CCA 72 bp GGGCACCACCATTCTTCAGCACCTTTAGCAGGTCCGTaGCGTTGTCCAGCTGGGCTGCGAGGCTCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: GHHHSSAPLAGP*RCPAGLRGSGG
Trigger: GCCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGGTGCTGAAGAATGGTGGTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CAA 90 bp CCCTTCCCTCCGACAATAAGCAGCGCGGCAGCGTCAACCTCACAGTaGCTATGGCAACCCCGGCCTCCAGGCAGCTGCTGGCGGTGTAGG +
Preference number: 6 (lower is better)
Translates to: PFPPTISSAAASTSQ*LWQPRPPGSCWRCR
Trigger: CCTACACCGCCAGCAGCTGCCTGGAGGCCGGGGTTGCCATAGCAACTGTGAGGTTGACGCTGCCGCGCTGCTTATTGTCGGAGGGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS CAA 72 bp CCGACAATAAGCAGCGCGGCAGCGTCAACCTCACAGTaGCTATGGCAACCCCGGCCTCCAGGCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PTISSAAASTSQ*LWQPRPPGSCW
Trigger: CCAGCAGCTGCCTGGAGGCCGGGGTTGCCATAGCAACTGTGAGGTTGACGCTGCCGCGCTGCTTATTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673971.1
CDS CAA 90 bp AGGTGGGCACCACCATTCTTCAGCACCTTTAGCAGGTCCGTGGCGTaGTCCAGCTGGGCTGCGAGGCTCAGGGGGCACTCTCCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: RWAPPFFSTFSRSVA*SSWAARLRGHSPES
Trigger: TGACTCAGGAGAGTGCCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGGTGCTGAAGAATGGTGGTGCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CCA 72 bp TTCAGCACCTTTAGCAGGTCCGTGGCGTTGTCCAGCTaGGCTGCGAGGCTCAGGGGGCACTCTCCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: FSTFSRSVALSS*AARLRGHSPES
Trigger: TGACTCAGGAGAGTGCCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGGTGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CAA 72 bp CCACCATTCTTCAGCACCTTTAGCAGGTCCGTGGCGTaGTCCAGCTGGGCTGCGAGGCTCAGGGGGCACTCT +
Preference number: 6 (lower is better)
Translates to: PPFFSTFSRSVA*SSWAARLRGHS
Trigger: AGAGTGCCCCCTGAGCCTCGCAGCCCAGCTGGACAACGCCACGGACCTGCTAAAGGTGCTGAAGAATGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 72 bp TCTTGCTTTGGCCGGCCCTGCCTGCTAAAGGGCCACTaGTGTTGCTCTCCTGGTCGGCATCCCGGTCACGAT +
Preference number: 6 (lower is better)
Translates to: SCFGRPCLLKGH*CCSPGRHPGHD
Trigger: ATCGTGACCGGGATGCCGACCAGGAGAGCAACATCAGTGGCCCTTTAGCAGGCAGGGCCGGCCAAAGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS GCA 72 bp CTCGGGACCACGGCGCAGCTCGACAGAGCAGCCACATaGAGATGGGCAGGAGAGAGCAATGAGAGAGAGAGT +
Preference number: 6 (lower is better)
Translates to: LGTTAQLDRAAT*RWAGESNERES
Trigger: ACTCTCTCTCTCATTGCTCTCTCCTGCCCATCTGCATGTGGCTGCTCTGTCGAGCTGCGCCGTGGTCCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659388.1
CDS CCA 72 bp ACGGCAGTGAGCCCATCGCGAGTGCGGAAGTCCAGGTaGGCACCACCATTCTTCAGCACCTTTAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: TAVSPSRVRKSR*APPFFSTFSRS
Trigger: GGACCTGCTAAAGGTGCTGAAGAATGGTGGTGCCCACCTGGACTTCCGCACTCGCGATGGGCTCACTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 72 bp CCGGTGACAGAAGCCTGCATAACACAAACACCCACATaGCGGTCACAGACACCCCACGACGGCAAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PVTEACITQTPT*RSQTPHDGKGP
Trigger: GGGACCCTTGCCGTCGTGGGGTGTCTGTGACCGTCATGTGGGTGTTTGTGTTATGCAGGCTTCTGTCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674010.1
ENST00000674145.1
CDS GCA 72 bp ACATCGCAGGGGCCTCCAATGGAGAAGCTGCAGAAGTaGCACGGGAACCCCGCAATGCAAGGAAGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TSQGPPMEKLQK*HGNPAMQGSSV
Trigger: TACAGAGCTTCCTTGCATTGCGGGGTTCCCGTGGCACTTCTGCAGCTTCTCCATTGGAGGCCCCTGCGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000673838.1
ENST00000674010.1
ENST00000674145.1
CDS TCA 72 bp CCTCTTCTGGCTTCCTTGTCACAGACACAACCTTCATaGCGAGGCGGTTGCCACCCTGGCGAATCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PLLASLSQTQPS*RGGCHPGESEP
Trigger: TGGCTCTGATTCGCCAGGGTGGCAACCGCCTCGTCATGAAGGTTGTGTCTGTGACAAGGAAGCCAGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CAA 72 bp TTCCTTGTCACAGACACAACCTTCATGACGAGGCGGTaGCCACCCTGGCGAATCAGAGCCACCACCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FLVTDTTFMTRR*PPWRIRATTCL
Trigger: CAAGCAGGTGGTGGCTCTGATTCGCCAGGGTGGCAACCGCCTCGTCATGAAGGTTGTGTCTGTGACAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS TCA 72 bp CCACCTTGTCCGTGCTATGCAGCTGGACGTAGTCCATaGACTTCTTCAGGTTCGCCTTTGTGTGAAGCTTTG +
Preference number: 6 (lower is better)
Translates to: PPCPCYAAGRSP*TSSGSPLCEAL
Trigger: CAAAGCTTCACACAAAGGCGAACCTGAAGAAGTTCATGGACTACGTCCAGCTGCATAGCACGGACAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS CAA 72 bp CTGGGGGTTTCCCTGAATGGTACAACATCCGAGTCTTaGTGGGTCTTGATAACCTCTGCAAGCTCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: LGVSLNGTTSES*WVLITSASSKF
Trigger: GAACTTTGAGCTTGCAGAGGTTATCAAGACCCACAAAGACTCGGATGTTGTACCATTCAGGGAAACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1
CDS GCA 72 bp CATGAACTTCTTCAGGTTCGCCTTTGTGTGAAGCTTTaGAAACTGCTTATCATCGATGAGGTTCTGGGCATA +
Preference number: 6 (lower is better)
Translates to: HELLQVRLCVKL*KLLIIDEVLGI
Trigger: TATGCCCAGAACCTCATCGATGATAAGCAGTTTGCAAAGCTTCACACAAAGGCGAACCTGAAGAAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262795.6
ENST00000414786.6
ENST00000445220.5
ENST00000673971.1