RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHANK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162105

Ensembl transcript IDs: ENST00000338508.8, ENST00000357171.7, ENST00000409161.5, ENST00000409530.5, ENST00000412252.5, ENST00000424924.5, ENST00000425049.1, ENST00000426687.2, ENST00000445654.2, ENST00000449116.6, ENST00000449833.6, ENST00000460048.1, ENST00000468619.6, ENST00000470759.5, ENST00000482659.2, ENST00000498519.5, ENST00000601538.6, ENST00000606715.3, ENST00000608988.5, ENST00000618363.4, ENST00000645599.1, ENST00000654939.1, ENST00000656230.1, ENST00000659264.1

Found 3693 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGGGTGGGAAGGCAGAACTGGAGCAGCCGACCCGCCCTGGATGTaGGGAAGGGGCCTCCAGAGCCACCGGGCAGGAGGCAGCGGGGCT +
Preference number: 1 (lower is better)
Translates to: TGWEGRTGAADPPWM*GRGLQSHRAGGSGA
Trigger: AGCCCCGCTGCCTCCTGCCCGGTGGCTCTGGAGGCCCCTTCCGCACATCCAGGGCGGGTCGGCTGCTCCAGTTCTGCCTTCCCACCCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 90 bp CCCAGCACTGGGTGGGAAGGCAGAACTGGAGCAGCCGACCCGCCCTaGATGTGCGGAAGGGGCCTCCAGAGCCACCGGGCAGGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: PSTGWEGRTGAADPP*MCGRGLQSHRAGGS
Trigger: GCTGCCTCCTGCCCGGTGGCTCTGGAGGCCCCTTCCGCACATCCAGGGCGGGTCGGCTGCTCCAGTTCTGCCTTCCCACCCAGTGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp GGCCGTGATGAGGCGGGAGGGCAGGAGCAGCTGACCACACGGGGCTaGAGACGTTGGCTGCCTACTCACCCAGGGCAGTCTAGGGACACA +
Preference number: 1 (lower is better)
Translates to: GRDEAGGQEQLTTRG*RRWLPTHPGQSRDT
Trigger: TGTGTCCCTAGACTGCCCTGGGTGAGTAGGCAGCCAACGTCTGCAGCCCCGTGTGGTCAGCTGCTCCTGCCCTCCCGCCTCATCACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp AGCAGAGATGCTCACCCTTGGCTGGGCACAGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGC +
Preference number: 1 (lower is better)
Translates to: SRDAHPWLGTELRML*PPSSQRRRCLTGSR
Trigger: GCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCT +
Preference number: 1 (lower is better)
Translates to: EDAVPAQLPEETLSH*QPHVPAMSHASSCP
Trigger: AGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp CTTGGCCTTATGGCTAGAAGACACCCTGCTGGGGTGTGGGGAGACTaGACCCTAAGGGAAGGGTCCGGATCTGGCTGGCCCTCCGCGGCA +
Preference number: 1 (lower is better)
Translates to: LGLMARRHPAGVWGD*TLREGSGSGWPSAA
Trigger: TGCCGCGGAGGGCCAGCCAGATCCGGACCCTTCCCTTAGGGTCCAGTCTCCCCACACCCCAGCAGGGTGTCTTCTAGCCATAAGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR TCA 90 bp GGCAGAGGCTGGAGTGATGTGGAGGCTGGAGTGATGTGGCCCAGCTaGGGAGCACCAAGGACTGCAGGCCAACAGCAGAGGTGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: GRGWSDVEAGVMWPS*GAPRTAGQQQRWRR
Trigger: CCTCCTCCACCTCTGCTGTTGGCCTGCAGTCCTTGGTGCTCCTCAGCTGGGCCACATCACTCCAGCCTCCACATCACTCCAGCCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 90 bp TGCCACTCCCTTGGCCTTATGGCTAGAAGACACCCTGCTGGGGTGTaGGGAGACTGGACCCTAAGGGAAGGGTCCGGATCTGGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: CHSLGLMARRHPAGV*GDWTLREGSGSGWP
Trigger: GGGCCAGCCAGATCCGGACCCTTCCCTTAGGGTCCAGTCTCCCCACACCCCAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR GCA 90 bp AGGACTGAGGAAAGGCCTCATGCCGGGGCCTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTG +
Preference number: 1 (lower is better)
Translates to: RTEERPHAGAWGGES*PESRGRRSQEVSRV
Trigger: CACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGGCCTTTCCTCAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp TGGCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGG +
Preference number: 1 (lower is better)
Translates to: WQTTALVLETWSLGS*TLAGSLGQVSPPLW
Trigger: CCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp TGTGGAGGCTGGAGTGATGTGGCCCAGCTGAGGAGCACCAAGGACTaGAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAG +
Preference number: 1 (lower is better)
Translates to: CGGWSDVAQLRSTKD*RPTAEVEEEDSPLE
Trigger: CTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTGCAGTCCTTGGTGCTCCTCAGCTGGGCCACATCACTCCAGCCTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 90 bp CTGGATGGGTGCTCATGGCAGACAACTGCTCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTC +
Preference number: 1 (lower is better)
Translates to: LDGCSWQTTALVLET*SLGSCTLAGSLGQV
Trigger: GACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp AGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGAACTaGGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCA +
Preference number: 1 (lower is better)
Translates to: RTVSAEMLTLGWAQN*GCCARPAPRGDAVS
Trigger: TGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp CAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTG +
Preference number: 1 (lower is better)
Translates to: QLLLSWRPGAWAVAR*LAPLARSPLHCGIV
Trigger: CACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp GGGCTGAAGCGACGGTGGTTCCTCTGGCCGGGGTTGGACATCGGATaGGGCACTGATGTCAGAACATGTGCACGTGTGAGGTCCAAGGTC +
Preference number: 1 (lower is better)
Translates to: GLKRRWFLWPGLDIG*GTDVRTCARVRSKV
Trigger: GACCTTGGACCTCACACGTGCACATGTTCTGACATCAGTGCCTCATCCGATGTCCAACCCCGGCCAGAGGAACCACCGTCGCTTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 90 bp GGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTTTCTGTTCAGCACGACC +
Preference number: 1 (lower is better)
Translates to: GAGANSEGDRRAPCT*DGAHDLRAFLFSTT
Trigger: GGTCGTGCTGAACAGAAAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCACAGAACTGAGGATGCTGTGCCCGCC +
Preference number: 1 (lower is better)
Translates to: HLPWPPRAKGLSQQR*SPLAGHRTEDAVPA
Trigger: GGCGGGCACAGCATCCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp TCTCCATCCTGGATGGGTGCTCATGGCAGACAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTG +
Preference number: 1 (lower is better)
Translates to: SPSWMGAHGRQLLLS*RPGAWAVARWLAPL
Trigger: CAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp GGTTGGACATCGGATGAGGCACTGATGTCAGAACATGTGCACGTGTaGGGTCCAAGGTCCAGGCCAGCAGAGGAGGGGGCTGCACATCTG +
Preference number: 1 (lower is better)
Translates to: GWTSDEALMSEHVHV*GPRSRPAEEGAAHL
Trigger: CAGATGTGCAGCCCCCTCCTCTGCTGGCCTGGACCTTGGACCTCACACGTGCACATGTTCTGACATCAGTGCCTCATCCGATGTCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp GTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCTCTCGGACCCGGCAAAGCGAGGCCA +
Preference number: 1 (lower is better)
Translates to: VSRVHWCLPTRARIP*KIDGEPLGPGKARP
Trigger: TGGCCTCGCTTTGCCGGGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp GAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGC +
Preference number: 1 (lower is better)
Translates to: EALILHPGWVLMADN*SCPGDLELGQLHAG
Trigger: GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp GGAGACGCTGTCTCACTGGCAGCCGCATGTGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCT +
Preference number: 1 (lower is better)
Translates to: GDAVSLAAACARHEP*VFLSFMSKWMLTCS
Trigger: AGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp CTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGAGAAGGAGAG +
Preference number: 1 (lower is better)
Translates to: LRPAGFKPNRSPEGG*LGRLKTSERAGEGE
Trigger: CTCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR CCA 90 bp TCATGCTTCCATCTGAACAATGCACAAGCACGAGTCGGCTGCTGCTaGCTGAGGAGGCTCCCTGGCCATCAGCGTGAACACTGTCGTGCT +
Preference number: 1 (lower is better)
Translates to: SCFHLNNAQARVGCC*LRRLPGHQREHCRA
Trigger: AGCACGACAGTGTTCACGCTGATGGCCAGGGAGCCTCCTCAGCCAGCAGCAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 90 bp CAGCTGGGTTGGTGGCCCCGTCTGGTGACAGCTTTAGTTCTTCCGTaGCCAGCTGGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCC +
Preference number: 1 (lower is better)
Translates to: QLGWWPRLVTALVLP*PAGTGFQSSEVTGA
Trigger: GGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCCAGCTGGTCACGGAAGAACTAAAGCTGTCACCAGACGGGGCCACCAACCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp GCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCCCGTGCAAAATTGACGGGGAGCCTC +
Preference number: 1 (lower is better)
Translates to: AEDGGLRRYLECTGV*LQELGSRAKLTGSL
Trigger: GAGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp CTGGGCACGATCCCATCCAAACTCCCAGCACTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAA +
Preference number: 1 (lower is better)
Translates to: LGTIPSKLPALPGTS*PKSHGCKPQEEMGK
Trigger: TTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGGATGGGATCGTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCTGCTGTaGTCACCCAGCCACTGTGGAATGTTCACCTACTTGCATGGGTTC +
Preference number: 1 (lower is better)
Translates to: DSPQSTGSPVCMQLL*SPSHCGMFTYLHGF
Trigger: GAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGACCACAGCAGCTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 90 bp GCCCCGTCTGGTGACAGCTTTAGTTCTTCCGTGACCAGCTGGGACTaGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCC +
Preference number: 1 (lower is better)
Translates to: APSGDSFSSSVTSWD*VSKFRSNWGQCQAA
Trigger: GGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCCAGCTGGTCACGGAAGAACTAAAGCTGTCACCAGACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp GCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTGCAAAATTG +
Preference number: 1 (lower is better)
Translates to: AARKAEDGGLRRYLE*TGVCLQELGSRAKL
Trigger: CAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCTAGGATCCCGTGCAAAATTGACGGG +
Preference number: 1 (lower is better)
Translates to: PESRGRRSQEVSRVH*CLPTRARIPCKIDG
Trigger: CCCGTCAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp GCAGAAGAGCTGTTGCCCTATGGCTTTTCCTGGCGTTCTTTCCGGTaGGGCCCGAATCCTTCTGGAATGACTCAGGGTCAACTTGCACCT +
Preference number: 1 (lower is better)
Translates to: AEELLPYGFSWRSFR*GPNPSGMTQGQLAP
Trigger: AGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCATAGGGCAACAGCTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp AAAGCTAAGCAAAGCTGGGCACGATCCCATCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAAAGAGCCATGGATGCAAACCACAGG +
Preference number: 1 (lower is better)
Translates to: KAKQSWARSHPNSQH*QEPHGQRAMDANHR
Trigger: CCTGTGGTTTGCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp GGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATaGAGCTGCTGTGGTCACCCAGCCACTGTGGAATGTTCACCTACT +
Preference number: 1 (lower is better)
Translates to: GNSLIPHKARAVLSA*SCCGHPATVECSPT
Trigger: AGTAGGTGAACATTCCACAGTGGCTGGGTGACCACAGCAGCTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR TCA 90 bp GCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATaGCTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAAT +
Preference number: 1 (lower is better)
Translates to: AFPGVLSGEARILLE*LRVNLHLCQELPSN
Trigger: ATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 90 bp CCGGGTCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTaGTCTTCTCCACCAAGCGATGCTGAATGTGATCCATGCATTTCT +
Preference number: 1 (lower is better)
Translates to: PGRGNWDPGLGPASW*SSPPSDAECDPCIS
Trigger: AGAAATGCATGGATCACATTCAGCATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGACCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR TCA 90 bp AGCAGTAGGGATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTaGGGCCGTAACTGTCTTTATAATCTGGGGATGCACCAAGCTCTA +
Preference number: 1 (lower is better)
Translates to: SSRDHLRRWLCDTAG*GRNCLYNLGMHQAL
Trigger: TAGAGCTTGGTGCATCCCCAGATTATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCCTACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR CCA 90 bp CTATGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTaGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCAT +
Preference number: 1 (lower is better)
Translates to: LWLFLAFFPVRPESF*NDSGSTCTCARNFH
Trigger: ATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 90 bp TTGGTGGCCCCGTCTGGTGACAGCTTTAGTTCTTCCGTGACCAGCTaGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAA +
Preference number: 1 (lower is better)
Translates to: LVAPSGDSFSSSVTS*DWVSKFRSNWGQCQ
Trigger: TTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCCAGCTGGTCACGGAAGAACTAAAGCTGTCACCAGACGGGGCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 90 bp CGAAGTCACGAGTTTCGACTGGTTATCGTCTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTGTTTTGCCTGGCACTGAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: RSHEFRLVIVCQRFP*LSFELVFCLALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCAGACGATAACCAGTCGAAACTCGTGACTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GACACCCACATGGTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTaGACACAACTCAGTATTTCTTTGGGTACCAGGAGACAAACCCAT +
Preference number: 1 (lower is better)
Translates to: DTHMVSQGSEDPAML*TQLSISLGTRRQTH
Trigger: ATGGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCACCATGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp TCTGCTTTCACTCTGATCCTGCCGCCCACCTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCT +
Preference number: 1 (lower is better)
Translates to: SAFTLILPPTFCSQP*VLSILHTHWVLKEA
Trigger: AGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp TGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTTGGG +
Preference number: 1 (lower is better)
Translates to: CDRNCPRHPHGEPGV*RPSHVVDTTQYFFG
Trigger: CCCAAAGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp ATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATaGTCATGCTTCCATCTGAACAATGCACAAGCACGAGTCGGCTGC +
Preference number: 1 (lower is better)
Translates to: MTQGQLAPVPGTSIQ*SCFHLNNAQARVGC
Trigger: GCAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAGCATGATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATaGATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAG +
Preference number: 1 (lower is better)
Translates to: KSFSAFQAHDGALDK*IWEHLTASQVQEKE
Trigger: CTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp TTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGGGTCAACTTaGACCTGTGCCAGGAACTTCCATCCAATGATCATGCTTCCATCT +
Preference number: 1 (lower is better)
Translates to: FPVRPESFWNDSGST*TCARNFHPMIMLPS
Trigger: AGATGGAAGCATGATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 90 bp TGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGATCTTTGCAGAGCTCAAGACATCTTC +
Preference number: 1 (lower is better)
Translates to: CARHEPCVFLSFMSK*MLTCSDLCRAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp CTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGC +
Preference number: 1 (lower is better)
Translates to: LGQVSPPLWNRDFVL*LTPCDICLATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAAAGCACAAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp GTTTCGACTGGTTATCGTCTGCCAGCGGTTTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGCACTGAGCACAGAGGTAATACCAAC +
Preference number: 1 (lower is better)
Translates to: VSTGYRLPAVSLTLL*ASVLPGTEHRGNTN
Trigger: GTTGGTATTACCTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCAGACGATAACCAGTCGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp TATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: YLSSSCFKALSMFIL*PTRVTPRSMRSSFC
Trigger: GCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR TCA 90 bp TGGTTTAGTCCACAGGTGGACAGGTTTAGTTGTAAAAGGCTTATTTaGGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCG +
Preference number: 1 (lower is better)
Translates to: WFSPQVDRFSCKRLI*DWLLQYRGGWRPTA
Trigger: CGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATAAGCCTTTTACAACTAAACCTGTCCACCTGTGGACTAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR TCA 90 bp TTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGTTTGGTAAGTGACTGCCATCGATCT +
Preference number: 1 (lower is better)
Translates to: FLCSFCARLELPQDR*GPPSAGLVSDCHRS
Trigger: AGATCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR GCA 90 bp CCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTTGCAGAGCTCAAGACATCTTCAATT +
Preference number: 1 (lower is better)
Translates to: PAMSHASSCPSCQSG*SPALIFAELKTSSI
Trigger: AATTGAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp CTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATaGCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGG +
Preference number: 1 (lower is better)
Translates to: LSTEVIPTVGPGKVP*QRNGLTEFCGIIKW
Trigger: CCATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GTGGACACAACTCAGTATTTCTTTGGGTACCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCACAGACTTCGCTTGGCATTCAGATGT +
Preference number: 1 (lower is better)
Translates to: VDTTQYFFGYQETNP*SGVDAHRLRLAFRC
Trigger: ACATCTGAATGCCAAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTGTGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp ACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTTGTACTGTTAAGACAAGCTGGTGGG +
Preference number: 1 (lower is better)
Translates to: TFCSQPWVLSILHTH*VLKEAVVLLRQAGG
Trigger: CCCACCAGCTTGTCTTAACAGTACAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GCTGCTGTGGTCACCCAGCCACTGTGGAATGTTCACCTACTTGCATaGGTTCATGGTTGTCTACAAATACAGAAACACATTCCAGTTCGC +
Preference number: 1 (lower is better)
Translates to: AAVVTQPLWNVHLLA*VHGCLQIQKHIPVR
Trigger: GCGAACTGGAATGTGTTTCTGTATTTGTAGACAACCATGAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGACCACAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR GCA 90 bp TGCAGCTGCTGTGGTCACCCAGCCACTGTGGAATGTTCACCTACTTaGATGGGTTCATGGTTGTCTACAAATACAGAAACACATTCCAGT +
Preference number: 1 (lower is better)
Translates to: CSCCGHPATVECSPT*MGSWLSTNTETHSS
Trigger: ACTGGAATGTGTTTCTGTATTTGTAGACAACCATGAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGACCACAGCAGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 90 bp CAGCTCTTTAGTCTTGCAGCCAGCTTGCTTGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGAAAGGGAATAACATCTGGCCCTCAC +
Preference number: 1 (lower is better)
Translates to: QLFSLAASLLVVSGM*LGVSLRKGITSGPH
Trigger: GTGAGGGCCAGATGTTATTCCCTTTCTTAAAGATACTCCAAGCCACATGCCACTAACCACAAGCAAGCTGGCTGCAAGACTAAAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 90 bp CCTTCTGCAGGTTTGGTAAGTGACTGCCATCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAAT +
Preference number: 1 (lower is better)
Translates to: PSAGLVSDCHRSHCP*RPLYVHPSLDFPAN
Trigger: ATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGGCAGTCACTTACCAAACCTGCAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR CCA 90 bp GGTCACCCAGCCACTGTGGAATGTTCACCTACTTGCATGGGTTCATaGTTGTCTACAAATACAGAAACACATTCCAGTTCGCCAGTTATT +
Preference number: 1 (lower is better)
Translates to: GHPATVECSPTCMGS*LSTNTETHSSSPVI
Trigger: AATAACTGGCGAACTGGAATGTGTTTCTGTATTTGTAGACAACCATGAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR TCA 90 bp CTCGTCCTAACATGTCCCAAAGGGGGAGAACAGTGGGTGGTGATTTaGATGAGGAACTATTGCTTTCAGTACCAAAATAAGCAGATAGAG +
Preference number: 1 (lower is better)
Translates to: LVLTCPKGGEQWVVI*MRNYCFQYQNKQIE
Trigger: CTCTATCTGCTTATTTTGGTACTGAAAGCAATAGTTCCTCATTCAAATCACCACCCACTGTTCTCCCCCTTTGGGACATGTTAGGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 90 bp AGTATCTTTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATC +
Preference number: 1 (lower is better)
Translates to: SIFKKGNNIWPSPTG*QSSTNRSHEFRLVI
Trigger: GATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAAAGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTA +
Preference number: 1 (lower is better)
Translates to: GNTNCRPRESAMPKE*THGILRYHQMEDKL
Trigger: TAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp TTTAAAATATGCTTCCCTAAAGCGGAGGGATGGCCCATGTCTTCCTaGCTTAGTTCTTTGCCAATAGACACAAATTCTCTCTTGCTCCAA +
Preference number: 1 (lower is better)
Translates to: FKICFPKAEGWPMSS*LSSLPIDTNSLLLQ
Trigger: TTGGAGCAAGAGAGAATTTGTGTCTATTGGCAAAGAACTAAGCCAGGAAGACATGGGCCATCCCTCCGCTTTAGGGAAGCATATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR GCA 90 bp GTGTCCTCAACATTTCATAGCTCGAACCGTCCTTTCTTTACGTTGTaGATTGATATGGGCTTCTCAGTTCAGAAAACAAGGCACTATAAC +
Preference number: 1 (lower is better)
Translates to: VSSTFHSSNRPFFTL*IDMGFSVQKTRHYN
Trigger: GTTATAGTGCCTTGTTTTCTGAACTGAGAAGCCCATATCAATGCACAACGTAAAGAAAGGACGGTTCGAGCTATGAAATGTTGAGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR TCA 90 bp ATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGACATCTTCAATTAAAAAGAATTCTG +
Preference number: 1 (lower is better)
Translates to: MRLLVLHVKVDAHLL*SLQSSRHLQLKRIL
Trigger: CAGAATTCTTTTTAATTGAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 90 bp GTAGAACAAGTTACAGGAACGATAAACAAAATCACCAATACAGCATaGATTAGAAATCAAAGTGATGAGATCTGCGGAAGTCTGAGAAAC +
Preference number: 1 (lower is better)
Translates to: VEQVTGTINKITNTA*IRNQSDEICGSLRN
Trigger: GTTTCTCAGACTTCCGCAGATCTCATCACTTTGATTTCTAATCCATGCTGTATTGGTGATTTTGTTTATCGTTCCTGTAACTTGTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR TCA 90 bp TGCTGCATTATGAATTGTAACCACTTTGAAGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGATAGAAAATATAACACAGCTCTGCTG +
Preference number: 1 (lower is better)
Translates to: CCIMNCNHFEEIVLQ*RSSSKDRKYNTALL
Trigger: CAGCAGAGCTGTGTTATATTTTCTATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGTTACAATTCATAATGCAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAARGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGCGGTGACGCACAAGTaGAGGTGTCAGCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAAVTHK*RCQQGP
Trigger: GGGGCCCTGCTGACACCTGCACTTGTGCGTCACCGC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGTGGGAAGGCAGAACTaGAGCAGCCGACCCGCCCTG +
Preference number: 2 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGVGRQN*SSRPAL
Trigger: CAGGGCGGGTCGGCTGCTCCAGTTCTGCCTTCCCAC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGCTGCAGACGTTGGCTaGCTACTCACCCAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAAADVG*LLTQGS
Trigger: ACTGCCCTGGGTGAGTAGGCAGCCAACGTCTGCAGC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGTGGGGAACGGTGGATaGCAGAGTTCCCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGVGNGG*QSSHLC
Trigger: GCAGAGGTGGGAACTCTGTCATCCACCGTTCCCCAC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGCTGACCACACGGGGCTaGAGACGTTGGCTGCCTACT +
Preference number: 2 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGLTTRG*RRWLPT
Trigger: AGTAGGCAGCCAACGTCTGCAGCCCCGTGTGGTCAG...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGGCAGCCGACCCGCCCTaGATGTGCGGAAGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TVDDRVPTSASMQGGASKAADPP*MCGRGL
Trigger: GAGGCCCCTTCCGCACATCCAGGGCGGGTCGGCTGC...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCCATCTGAGCATTCGGTaGGGGGCGTTGCACATCCCA +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAHLSIR*GALHIP
Trigger: TGGGATGTGCAACGCCCCCCACCGAATGCTCAGATG...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CAA 90 bp GGGTGCTCATGGCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GCSWQTTALVLETWS*GSCTLAGSLGQVSP
Trigger: AGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAACLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCCATCGGATGAGGCACTaGTGTCAGAACATGTGCACG +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAHRMRH*CQNMCT
Trigger: CGTGCACATGTTCTGACATCAGTGCCTCATCCGATG...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGACTCAGGGTCAACTTaGACCTGTGCCAGGAACTTC +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVADSGST*TCARNF
Trigger: GAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCCAACAGTGCAGGACGTaGTTCTGTGAGAACCATACG +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAQQCRT*FCENHT
Trigger: CGTATGGTTCTCACAGAACCACGTCCTGCACTGTTG...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CAA 90 bp TGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTaGGCTGGGCACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: WPPRAKGLSQQRCSP*AGHRTEDAVPAQLP
Trigger: TGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCCTGGAGGAGGAGGACTaGAGTATACATAGGAGAATG +
Preference number: 2 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVALEEED*SIHRRM
Trigger: CATTCTCCTATGTATACTTCAGTCCTCCTCCTCCAG...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGCAGACAGAGTGGGGTTaGAAGGTAGGCAGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: PLREKSRGRLTPRGSAEEQTEWG*KVGSRP
Trigger: GGGCCGGCTGCCTACCTTCCAACCCCACTCTGTCTG...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CAA 90 bp GAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGACCCGGCAAAGCGAGGCCACCTGCAT +
Preference number: 2 (lower is better)
Translates to: ECTGVCLQELGSRAK*TGSLSDPAKRGHLH
Trigger: ATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRICWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGATCATGCTTCCATCTaGACAATGCACAAGCACGAG +
Preference number: 2 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGDHASI*TMHKHE
Trigger: CTCGTGCTTGTGCATTGTTCAGATGGAAGCATGATC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGGACACAGCTTGGCGGTaGCGCACAAGTGCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: PLREKSRGRLTPRGSAEEDTAWR*RTSAGV
Trigger: GACACCTGCACTTGTGCGTCACCGCCAAGCTGTGTC...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGACCCGCCCTGGATGTaGGGAAGGGGCCTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSDPPWM*GRGLQS
Trigger: GCTCTGGAGGCCCCTTCCGCACATCCAGGGCGGGTC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCGGGGCTGCAGACGTTaGCTGCCTACTCACCCAGGG +
Preference number: 2 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCRGCRR*LPTHPG
Trigger: CCCTGGGTGAGTAGGCAGCCAACGTCTGCAGCCCCG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CTCGGGCAGCTTTGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAGTCCAGGTCCGGTCTCCGGGTCGTaGAAATTGGGATCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LGQLCVGRSSHLWHGSPGPVSGS*KLGSRP
Trigger: AGGCCTGGATCCCAATTTCCACGACCCGGAGACCGG...ACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR-3UTR CCA 90 bp GCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGTCTTCAGGGCAACTTaGTTCCTCGCTCGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: AHSGVFVQEKLAAVGITSVFRAT*FLARAA
Trigger: AGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGAC...GGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR CAA 90 bp TGGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTaGGCCTTATGGCTAGAAGACACCCTGCTGGGGTGTGGGGAGACT +
Preference number: 2 (lower is better)
Translates to: WFACQPERRPSSATP*ALWLEDTLLGCGET
Trigger: AGTCTCCCCACACCCCAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGEGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 2 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGERMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 2 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 2 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAADPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 2 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RGREALILHPGWVLMADNWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGGGCTGAAGCGACGGTaGTTCCTCTGGCCGGGGTTG +
Preference number: 2 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSGLKRR*FLWPGL
Trigger: CAACCCCGGCCAGAGGAACCACCGTCGCTTCAGCCC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CCAGCCGTTCTCATCTTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCCCGGGTCGTGGAAATTaGGATCCAGGCCTCGGTCCA +
Preference number: 2 (lower is better)
Translates to: PAVLIFAAHSGVFVQEKLPGRGN*DPGLGP
Trigger: TGGACCGAGGCCTGGATCCCAATTTCCACGACCCGG...GAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAGATGAGAACGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR CAA 90 bp CCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: PYSPSWMGAHGRQLL*SWRPGAWAVARWLA
Trigger: AGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRADPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESARMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 2 (lower is better)
Translates to: RLAVAVSRGMATYCVPLGGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...ACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAGGTCAGAGTGGGGCTaGAGCGACGGTGGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCRSEWG*SDGGSS
Trigger: AGAGGAACCACCGTCGCTTCAGCCCCACTCTGACCT...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCTCGGCTGCTGCTGGCTaGGGAGGCTCCCTGGCCATC +
Preference number: 2 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSISAAAG*GGSLAI
Trigger: GATGGCCAGGGAGCCTCCTCAGCCAGCAGCAGCCGA...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRITPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 2 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCCGAGTCGGCTGCTGCTaGCTGAGGAGGCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: WNDSGSTCTCARNFHPMIRVGCC*LRRLPG
Trigger: GCCAGGGAGCCTCCTCAGCCAGCAGCAGCCGACTCG...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 2 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 2 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 2 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR GCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAGCACGAGTCGGCTGCTaGTGGCTGAGGAGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSARVGC*WLRRLP
Trigger: AGGGAGCCTCCTCAGCCAGCAGCAGCCGACTCGTGC...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCACAAGCACGAGTCGGCTaGTGCTGGCTGAGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAQARVG*CWLRRL
Trigger: GAGCCTCCTCAGCCAGCAGCAGCCGACTCGTGCTTG...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: GCCARPAPRGDAVSLAAASAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGEQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 2 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 2 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTTGCACATCCCAGCACTaGGTGGGAAGGCAGAACTGG +
Preference number: 2 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCCTSQH*VGRQNW
Trigger: CCAGTTCTGCCTTCCCACCCAGTGCTGGGATGTGCA...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCACGACGGTGGTTCCTCTaGCCGGGGTTGGACATCGGA +
Preference number: 2 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRARRWFL*PGLDIG
Trigger: TCCGATGTCCAACCCCGGCCAGAGGAACCACCGTCG...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CAA 90 bp GTCTCACTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTTTGC +
Preference number: 2 (lower is better)
Translates to: VSLAAACARHEPCVF*SFMSKWMLTCSDLC
Trigger: GCAAAGATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCACTCTTAAAGCGGCTGTaGGTGGTCTGTGGGGAACGG +
Preference number: 2 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSLLKRL*VVCGER
Trigger: CCGTTCCCCACAGACCACTCACAGCCGCTTTAAGAG...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCCCCTGGCCATCAGCGTaGACACTGTCGTGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: WNDSGSTCTCARNFHPMIPWPSA*TLSCSC
Trigger: GCAGGAGCACGACAGTGTTCACGCTGATGGCCAGGG...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGERARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGELGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDEGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCCACCTCTGCCTCCATaGAGGGTGGGGCTTCCAAGG +
Preference number: 2 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIPPLPP*RVGLPR
Trigger: CCTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGG...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAGAGTTCCCACCTCTaGCTCCATGCAGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIQSSHL*LHAGWG
Trigger: GCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTG...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 2 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCATCCTCTGGCCGGGGTTaGACATCGGATGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRASSGRG*TSDEAL
Trigger: CAGTGCCTCATCCGATGTCCAACCCCGGCCAGAGGA...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 2 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESANIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAGAACATGTGCACGTGTaGGGTCCAAGGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAEHVHV*GPRSRP
Trigger: TGGCCTGGACCTTGGACCTCACACGTGCACATGTTC...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RGREALILHPGWVLMADNSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 2 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGELDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 2 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGEILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGTCTGTGGGGAACGGTaGATGACAGAGTTCCCACCT +
Preference number: 2 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSVCGER*MTEFPP
Trigger: AGGTGGGAACTCTGTCATCCACCGTTCCCCACAGAC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp CTCGGGCAGCTTTGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAGTCCAGGTTCTTCGTGTGGAGCTTaGCCAACTGTTTCTCATCGA +
Preference number: 2 (lower is better)
Translates to: LGQLCVGRSSHLWHGSPGSSCGA*PTVSHR
Trigger: TCGATGAGAAACAGTTGGCCAAGCTCCACACGAAGA...ACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR-3UTR CCA 90 bp TTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTAGGGCGGTCATCCCAAGATTGGTCTTCGTGTaGAGCTTGGCCAACTGTTTC +
Preference number: 2 (lower is better)
Translates to: FRATWFLARAALCRAVIPRLVFV*SLANCF
Trigger: GAAACAGTTGGCCAAGCTCCACACGAAGACCAATCT...TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 2 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESACWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGGGTTGGACATCGGATaGGGCACTGATGTCAGAACA +
Preference number: 2 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSGLDIG*GTDVRT
Trigger: TGTTCTGACATCAGTGCCTCATCCGATGTCCAACCC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RQISSVTGACLLDERDFSQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: RGREALILHPGWVLMADNRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCAGCAGAGGAGGGGGCTaGACATCTGAGCATTCGGTG +
Preference number: 2 (lower is better)
Translates to: WNDSGSTCTCARNFHPMISRGGG*TSEHSV
Trigger: CACCGAATGCTCAGATGTGCAGCCCCCTCCTCTGCT...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGEKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 2 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGTTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: CPTRVTPRSMRSSFCRFGFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...ACCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR CAA 90 bp CAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCCAGCCATGTaGTGGACACAACTCAGTATTTCTTTGGGTACCAGGAGACAAACC +
Preference number: 2 (lower is better)
Translates to: QDTHMVSQGSEDPAM*WTQLSISLGTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: HLGASHCKPSAGERGAGERDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 2 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCACACTGTCGTGCTCCTaGCTAGAAGCCCTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSITLSCS*LEALAV
Trigger: AACAGCCAGGGCTTCTAGGCAGGAGCACGACAGTGT...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp GCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGCTGAATGTGATCCATaGATTTCTTCAGATTGGTCT +
Preference number: 2 (lower is better)
Translates to: AHSGVFVQEKLAAVGITSAECDP*ISSDWS
Trigger: AGACCAATCTGAAGAAATGCATGGATCACATTCAGC...GGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 2 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 2 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: RQISSVTGACLLDERDFSRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGGAACTTCCATCCAATaGTCATGCTTCCATCTGAAC +
Preference number: 2 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCGTSIQ*SCFHLN
Trigger: GTTCAGATGGAAGCATGATCATTGGATGGAAGTTCC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 2 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: PSISLSMKASLCSPKFRLGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR GCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCACTTCCATCTGAACAATaGACAAGCACGAGTCGGCTG +
Preference number: 2 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRALPSEQ*TSTSRL
Trigger: CAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAG...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 2 (lower is better)
Translates to: RGREALILHPGWVLMADNVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 2 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAACATTCCAGACAGAGTaGGGTTGGAAGGTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSTFQTE*GWKVGS
Trigger: GCTGCCTACCTTCCAACCCCACTCTGTCTGGAATGT...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGAAAGTGACGACACTTaGAATTTGGGTCTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCESDDT*NLGLCR
Trigger: CCTGCAAAGACCCAAATTCCAAGTGTCGTCACTTTC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 2 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LAAACARHEPCVFLSFMSIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDEKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR TCA 90 bp ATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: ICPAAVSKPFLCSFCARLLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...GAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 2 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: RGREALILHPGWVLMADNTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 2 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTATTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAAGGCCCGAATCCTTCTaGAATGACTCAGGGTCAACT +
Preference number: 2 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSRPESF*NDSGST
Trigger: AGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCT...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTAAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: PAAVSKPFLCSFCARLELKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR TCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACTGAGATGGTGCTCATaGTCTCCGGGCTTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: PAAVSKPFLCSFCARLELLRWCS*SPGFSV
Trigger: AACAGAAAAGCCCGGAGATCATGAGCACCATCTCAG...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 2 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTGTTCACTGTTTGTTTaGAATCAGAACCACAACCTT +
Preference number: 2 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYCSLFV*NQNHNL
Trigger: AAGGTTGTGGTTCTGATTGCAAACAAACAGTGAACA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 2 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESASAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CAA 90 bp ATGCAGCTGCTGTGGTCACCCAGCCACTGTGGAATGTTCACCTACTaGCATGGGTTCATGGTTGTCTACAAATACAGAAACACATTCCAG +
Preference number: 2 (lower is better)
Translates to: MQLLWSPSHCGMFTY*HGFMVVYKYRNTFQ
Trigger: CTGGAATGTGTTTCTGTATTTGTAGACAACCATGAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGACCACAGCAGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 2 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 2 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 2 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 2 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDEGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 2 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 2 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 2 (lower is better)
Translates to: LHVTSAWPPWNYANRFAECWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 2 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSENVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSESLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITELSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTAGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: PAAVSKPFLCSFCARLELGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR CAA 90 bp CACCCAGCCACTGTGGAATGTTCACCTACTTGCATGGGTTCATGGTaGTCTACAAATACAGAAACACATTCCAGTTCGCCAGTTATTAAA +
Preference number: 2 (lower is better)
Translates to: HPATVECSPTCMGSW*STNTETHSSSPVIK
Trigger: TTTAATAACTGGCGAACTGGAATGTGTTTCTGTATTTGTAGACAACCATGAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 2 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: PSISLSMKASLCSPKFRLDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 2 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 2 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 2 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITELTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp AGTTGCAGGATCGGATTTTGGATAAATATTTTATCAAGACACATCGGATATGACAGCCGTTCTCATCTTTaGAGCACACAGTGGCGTGTT +
Preference number: 2 (lower is better)
Translates to: SCRIGFWINILSRHIGYDSRSHL*STQWRV
Trigger: AACACGCCACTGTGTGCTGCAAAGATGAGAACGGCT...GTCATATCCGATGTGTCTTGATAAAATATTTATCCAAAATCCGATCCTGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITEHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 2 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGAGCCTGTTTACTCGATaGGAGAGATTTTTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITESLFTR*ERFFWS
Trigger: TGACCAGAAAAATCTCTCTCATCGAGTAAACAGGCT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITESCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 2 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 2 (lower is better)
Translates to: TKSHCQINWIMLACSITELCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 2 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 2 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GAAGGCAGAACTGGAGCAGCCGACCCGCCCTGGATGTaGGGAAGGGGCCTCCAGAGCCACCGGGCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: EGRTGAADPPWM*GRGLQSHRAGG
Trigger: GCCTCCTGCCCGGTGGCTCTGGAGGCCCCTTCCGCACATCCAGGGCGGGTCGGCTGCTCCAGTTCTGCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp GGGTGGGAAGGCAGAACTGGAGCAGCCGACCCGCCCTaGATGTGCGGAAGGGGCCTCCAGAGCCACCGGGCA +
Preference number: 3 (lower is better)
Translates to: GWEGRTGAADPP*MCGRGLQSHRA
Trigger: TGCCCGGTGGCTCTGGAGGCCCCTTCCGCACATCCAGGGCGGGTCGGCTGCTCCAGTTCTGCCTTCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp GTGGGGAGACTGGACCCTAAGGGAAGGGTCCGGATCTaGCTGGCCCTCCGCGGCACCGCTGCTTCCACCCAG +
Preference number: 3 (lower is better)
Translates to: VGRLDPKGRVRI*LALRGTAASTQ
Trigger: CTGGGTGGAAGCAGCGGTGCCGCGGAGGGCCAGCCAGATCCGGACCCTTCCCTTAGGGTCCAGTCTCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGACGGGGCTGCAGACGTaGGCTGCCTACTCACCCAGG +
Preference number: 3 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGTGLQT*AAYSPR
Trigger: CCTGGGTGAGTAGGCAGCCAACGTCTGCAGCCCCGT...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp GTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCT +
Preference number: 3 (lower is better)
Translates to: VPAQLPEETLSH*QPHVPAMSHAS
Trigger: AGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp GGAGACTGGACCCTAAGGGAAGGGTCCGGATCTGGCTaGCCCTCCGCGGCACCGCTGCTTCCACCCAGAACA +
Preference number: 3 (lower is better)
Translates to: GDWTLREGSGSG*PSAAPLLPPRT
Trigger: TGTTCTGGGTGGAAGCAGCGGTGCCGCGGAGGGCCAGCCAGATCCGGACCCTTCCCTTAGGGTCCAGTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 72 bp GGAGCCCCCGGAGGGAGCGTGGCCCTGCTGTCATCTTaGTTTTGGACCTCTGGCCTCCAGGGCTGTGACAGG +
Preference number: 3 (lower is better)
Translates to: GAPGGSVALLSS*FWTSGLQGCDR
Trigger: CCTGTCACAGCCCTGGAGGCCAGAGGTCCAAAACCAAGATGACAGCAGGGCCACGCTCCCTCCGGGGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp CCAGCAGAGGAGGGGGCTGCACATCTGAGCATTCGGTaGGGGGCGTTGCACATCCCAGCACTGGGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: PAEEGAAHLSIR*GALHIPALGGK
Trigger: CTTCCCACCCAGTGCTGGGATGTGCAACGCCCCCCACCGAATGCTCAGATGTGCAGCCCCCTCCTCTGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp CGGGGAGCCTCTCGGACCCGGCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTGAGAATCTTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: RGASRTRQSEAT*MLGGRLRIFFH
Trigger: ATGGAAAAAGATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGAGGCTCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GCTCACCCTTGGCTGGGCACAGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACT +
Preference number: 3 (lower is better)
Translates to: AHPWLGTELRML*PPSSQRRRCLT
Trigger: AGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTGCCCAGCCAAGGGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp AAGGGTCCGGATCTGGCTGGCCCTCCGCGGCACCGCTaGTTCCACCCAGAACAAAAGGAAAAGCCGAGCCTC +
Preference number: 3 (lower is better)
Translates to: KGPDLAGPPRHR*FHPEQKEKPSL
Trigger: GAGGCTCGGCTTTTCCTTTTGTTCTGGGTGGAAGCAGCGGTGCCGCGGAGGGCCAGCCAGATCCGGACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 72 bp GGCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GRQLLLSWRPGA*AVARWLAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGATGGCAGAAGAGCTGTaGCCCTATGGCTTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGMAEEL*PYGFSW
Trigger: CCAGGAAAAGCCATAGGGCAACAGCTCTTCTGCCAT...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CAA 90 bp GGGATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTCCGGGTCGTGGAAATaGGGATCCAGGCCTCGGTCC +
Preference number: 3 (lower is better)
Translates to: GITSDDGCVIQRGEAVTVSGSWK*GSRPRS
Trigger: GGACCGAGGCCTGGATCCCAATTTCCACGACCCGGA...GACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR CCA 72 bp GAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATaGCTAGAAGACACCCTGCTGGGGTGTGGGGAGACT +
Preference number: 3 (lower is better)
Translates to: ERRPSSATPLAL*LEDTLLGCGET
Trigger: AGTCTCCCCACACCCCAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: HLGASHCKPSAGERGAGELELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 3 (lower is better)
Translates to: DWLLQYRGGWRPTASRWVAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...AACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR TCA 72 bp TCGGATGAGGCACTGATGTCAGAACATGTGCACGTGTaGGGTCCAAGGTCCAGGCCAGCAGAGGAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: SDEALMSEHVHV*GPRSRPAEEGA
Trigger: AGCCCCCTCCTCTGCTGGCCTGGACCTTGGACCTCACACGTGCACATGTTCTGACATCAGTGCCTCATCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 72 bp CGACGGTGGTTCCTCTGGCCGGGGTTGGACATCGGATaGGGCACTGATGTCAGAACATGTGCACGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: RRWFLWPGLDIG*GTDVRTCARVR
Trigger: CCTCACACGTGCACATGTTCTGACATCAGTGCCTCATCCGATGTCCAACCCCGGCCAGAGGAACCACCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 72 bp TGCTTCCATCTGAACAATGCACAAGCACGAGTCGGCTaGTGCTGGCTGAGGAGGCTCCCTGGCCATCAGCGT +
Preference number: 3 (lower is better)
Translates to: CFHLNNAQARVG*CWLRRLPGHQR
Trigger: ACGCTGATGGCCAGGGAGCCTCCTCAGCCAGCAGCAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 72 bp TGGAGTGATGTGGCCCAGCTGAGGAGCACCAAGGACTaGAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCT +
Preference number: 3 (lower is better)
Translates to: WSDVAQLRSTKD*RPTAEVEEEDS
Trigger: AGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTGCAGTCCTTGGTGCTCCTCAGCTGGGCCACATCACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp TGCTCATGGCAGACAACTGCTCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTT +
Preference number: 3 (lower is better)
Translates to: CSWQTTALVLET*SLGSCTLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp TGGATGGGTGCTCATGGCAGACAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: WMGAHGRQLLLS*RPGAWAVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp CTTGGCCTTATGGCTAGAAGACACCCTGCTGGGGTGTaGGGAGACTGGACCCTAAGGGAAGGGTCCGGATCT +
Preference number: 3 (lower is better)
Translates to: LGLMARRHPAGV*GDWTLREGSGS
Trigger: AGATCCGGACCCTTCCCTTAGGGTCCAGTCTCCCCACACCCCAGCAGGGTGTCTTCTAGCCATAAGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESALETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LRLAVAVSRGMATYCVPLGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...CAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 3 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCTCTCGGACCCGGCAAA +
Preference number: 3 (lower is better)
Translates to: VHWCLPTRARIP*KIDGEPLGPGK
Trigger: TTTGCCGGGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp TTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAG +
Preference number: 3 (lower is better)
Translates to: LAVAVSRGMATY*VPLGSSQIDPQ
Trigger: CTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR GCA 72 bp CTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATaGAGCTGCTGTGGTCACCCAGCCACTGTGGAATGT +
Preference number: 3 (lower is better)
Translates to: LIPHKARAVLSA*SCCGHPATVEC
Trigger: ACATTCCACAGTGGCTGGGTGACCACAGCAGCTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 72 bp CCTGGCTGTTCTCTTAAAGCGGCTGTGAGTGGTCTGTaGGGAACGGTGGATGACAGAGTTCCCACCTCTGCC +
Preference number: 3 (lower is better)
Translates to: PGCSLKAAVSGL*GTVDDRVPTSA
Trigger: GGCAGAGGTGGGAACTCTGTCATCCACCGTTCCCCACAGACCACTCACAGCCGCTTTAAGAGAACAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp TCTCGTGCCAGCCGTTCTCATCTTTGCAGCACACAGTaGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGG +
Preference number: 3 (lower is better)
Translates to: SRASRSHLCSTQ*RVRAGEARSSR
Trigger: CCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAGATGAGAACGGCTGGCACGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 3 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 3 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGACGATGTCTTCGTGTGGAGCTaGGCCAACTGTTTCTCATCG +
Preference number: 3 (lower is better)
Translates to: SGVFVQEKLAAVGITSDDVFVWS*ANCFSS
Trigger: CGATGAGAAACAGTTGGCCAAGCTCCACACGAAGAC...ATCGTCGGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR GCA 72 bp TGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCACAGAACTGAGGATGCT +
Preference number: 3 (lower is better)
Translates to: WPPRAKGLSQQR*SPLAGHRTEDA
Trigger: AGCATCCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GTGGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTaGCACTCCCTTGGCCTTATGGCTAGAAGACACCCT +
Preference number: 3 (lower is better)
Translates to: VVCLSTREAAQF*HSLGLMARRHP
Trigger: AGGGTGTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 72 bp TTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTaGAATGACTCAGGGTCAACTTGCACCTGTGCCAGG +
Preference number: 3 (lower is better)
Translates to: FLAFFPVRPESF*NDSGSTCTCAR
Trigger: CCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNREDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: HLGASHCKPSAGERGAGEQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: LAAACARHEPCVFLSFMSEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 3 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 72 bp GCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: ANSEGDRRAPCT*DGAHDLRAFLF
Trigger: GAACAGAAAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR GCA 72 bp TCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATaGATCTGGGAGCATCTCACTGCAAGCCAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: SAFQAHDGALDK*IWEHLTASQVQ
Trigger: CTGCACTTGGCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp ATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTG +
Preference number: 3 (lower is better)
Translates to: ILHPGWVLMADN*SCPGDLELGQL
Trigger: CAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCTCTTGTCCTGGAGACC +
Preference number: 3 (lower is better)
Translates to: EAEKPLFSILDG*SWQTTALVLET
Trigger: GGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp GAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTCCTGGAGACCTGGAGC +
Preference number: 3 (lower is better)
Translates to: EKPLFSILDGCS*QTTALVLETWS
Trigger: GCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp ACTCTGATCCTGCCGCCCACCTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCATACCCACTGGGTCCTC +
Preference number: 3 (lower is better)
Translates to: TLILPPTFCSQP*VLSILHTHWVL
Trigger: GAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGGATCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp GCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGA +
Preference number: 3 (lower is better)
Translates to: AGFKPNRSPEGG*LGRLKTSERAG
Trigger: TCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 3 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 72 bp AACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTGGACACAACTCAGTAT +
Preference number: 3 (lower is better)
Translates to: NCPRHPHGEPGV*RPSHVVDTTQY
Trigger: ATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 72 bp CTGTTGCCCTATGGCTTTTCCTGGCGTTCTTTCCGGTaGGGCCCGAATCCTTCTGGAATGACTCAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: LLPYGFSWRSFR*GPNPSGMTQGQ
Trigger: TTGACCCTGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCATAGGGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 72 bp GATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTaGGGCCGTAACTGTCTTTATAATCTGGGGATGCAC +
Preference number: 3 (lower is better)
Translates to: DHLRRWLCDTAG*GRNCLYNLGMH
Trigger: GTGCATCCCCAGATTATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR GCA 72 bp AAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAAGAGCTAGGATCCCGT +
Preference number: 3 (lower is better)
Translates to: KAEDGGLRRYLE*TGVCLQELGSR
Trigger: ACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp AGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCTAGGATCCCGTGCAAA +
Preference number: 3 (lower is better)
Translates to: RGRRSQEVSRVH*CLPTRARIPCK
Trigger: TTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp CTGAGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATaGGTGCTCATGGCAGACAACTGCTCTTGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: LRGREALILHPG*VLMADNCSCPG
Trigger: TCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 3 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 3 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: VPDSSYPKIDEVLLLQVWLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...CCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR TCA 72 bp GGTTATCGTCTGCCAGCGGTTTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGCACTGAGCACAGAGGT +
Preference number: 3 (lower is better)
Translates to: GYRLPAVSLTLL*ASVLPGTEHRG
Trigger: ACCTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCAGACGATAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 72 bp TCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGTTTGGTAAGTGACTGC +
Preference number: 3 (lower is better)
Translates to: SFCARLELPQDR*GPPSAGLVSDC
Trigger: GCAGTCACTTACCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR TCA 72 bp TGCCAGGAACTTCCATCCAATGATCATGCTTCCATCTaGACAATGCACAAGCACGAGTCGGCTGCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: CQELPSNDHASI*TMHKHESAAAG
Trigger: GCCAGCAGCAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAGCATGATCATTGGATGGAAGTTCCTGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 72 bp AAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTaGGAACCATACGGGCACCTGGAAGACTTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: KCVPSTVQDVVL*EPYGHLEDFLE
Trigger: CTCCAGGAAGTCTTCCAGGTGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 72 bp TGGTGGCCCCGTCTGGTGACAGCTTTAGTTCTTCCGTaGCCAGCTGGGACTGGGTTTCAAAGTTCAGAAGTA +
Preference number: 3 (lower is better)
Translates to: WWPRLVTALVLP*PAGTGFQSSEV
Trigger: TACTTCTGAACTTTGAAACCCAGTCCCAGCTGGTCACGGAAGAACTAAAGCTGTCACCAGACGGGGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR TCA 72 bp GGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTaGTCTTCTCCACCAAGCGATGCTGAATGTGATCCA +
Preference number: 3 (lower is better)
Translates to: GNWDPGLGPASW*SSPPSDAECDP
Trigger: TGGATCACATTCAGCATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR GCA 72 bp GGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCCCGTGCAAAATTGACG +
Preference number: 3 (lower is better)
Translates to: GGLRRYLECTGV*LQELGSRAKLT
Trigger: CGTCAATTTTGCACGGGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp CCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGT +
Preference number: 3 (lower is better)
Translates to: PDIRVSSKWGRM*WKPDCVFCGPC
Trigger: ACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 3 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGCCTTAGCATGTGGTTaGCTTGTCAACCAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQALACG*LVNQRG
Trigger: GCCTCTCTGGTTGACAAGCAAACCACATGCTAAGGC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 3 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGTCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: CPTRVTPRSMRSSFCRFGQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...ACCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 3 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CAA 90 bp CAAGCTCTAAAAGGGTCTTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTCCATTTTTGAGAGCTTaGATGACCTCCACAGAGTCG +
Preference number: 3 (lower is better)
Translates to: QALKGSSGQLGSSLGQLCPFLRA*MTSTES
Trigger: CGACTCTGTGGAGGTCATCAAAGCTCTCAAAAATGG...ACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACCCTTTTAGAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR TCA 72 bp GAGTTTCGACTGGTTATCGTCTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTGTTTTGCCTGGCACTG +
Preference number: 3 (lower is better)
Translates to: EFRLVIVCQRFP*LSFELVFCLAL
Trigger: CAGTGCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCAGACGATAACCAGTCGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp AACTTCCATCCAATGATCATGCTTCCATCTGAACAATaGACAAGCACGAGTCGGCTGCTGCTGGCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: NFHPMIMLPSEQ*TSTSRLLLAEE
Trigger: CTCCTCAGCCAGCAGCAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAGCATGATCATTGGATGGAAGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 72 bp AGGCCCGAATCCTTCTGGAATGACTCAGGGTCAACTTaGACCTGTGCCAGGAACTTCCATCCAATGATCATG +
Preference number: 3 (lower is better)
Translates to: RPESFWNDSGST*TCARNFHPMIM
Trigger: CATGATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR GCA 72 bp TCAATCCACAGTCACAGAAATGTGTGCCTTCAACAGTaGAGGACGTGGTTCTGTGAGAACCATACGGGCACC +
Preference number: 3 (lower is better)
Translates to: SIHSHRNVCLQQ*RTWFCENHTGT
Trigger: GGTGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTCTGTGACTGTGGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp ATGGTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTaGACACAACTCAGTATTTCTTTGGGTACCAGGAGA +
Preference number: 3 (lower is better)
Translates to: MVSQGSEDPAML*TQLSISLGTRR
Trigger: TCTCCTGGTACCCAAAGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp TCCTGGAGGAGGAGGACTGAAGTATACATAGGAGAATaGGTTGGAGGACTGGGGAGGGGACAGAAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: SWRRRTEVYIGE*VGGLGRGQKRK
Trigger: TTTTCTCTTCTGTCCCCTCCCCAGTCCTCCAACCCATTCTCCTATGTATACTTCAGTCCTCCTCCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp AGTCACAGAAATGTGTGCCTTCAACAGTGCAGGACGTaGTTCTGTGAGAACCATACGGGCACCTGGAAGACT +
Preference number: 3 (lower is better)
Translates to: SHRNVCLQQCRT*FCENHTGTWKT
Trigger: AGTCTTCCAGGTGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTCTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp ACAAACCAGGCCCAGTCTGGTCCTTATAGAGTTGTCTaGTGTGGTCAGTTGAATGGTGACTCAACCCACCCA +
Preference number: 3 (lower is better)
Translates to: TNQAQSGPYRVV*CGQLNGDSTHP
Trigger: TGGGTGGGTTGAGTCACCATTCAACTGACCACACCAGACAACTCTATAAGGACCAGACTGGGCCTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp GGTGACAGCTTTAGTTCTTCCGTGACCAGCTGGGACTaGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: GDSFSSSVTSWD*VSKFRSNWGQC
Trigger: ACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCCAGCTGGTCACGGAAGAACTAAAGCTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: RQISSVTGACLLDERDFSGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: PAAVSKPFLCSFCARLELLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000654939.1
3UTR-3UTR CAA 90 bp CAAGCTCTAAAAGGGTCTTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTATGCATTTCTTCAGATaGGTCTTCGTGTGGAGCTTG +
Preference number: 3 (lower is better)
Translates to: QALKGSSGQLGSSLGQLCMHFFR*VFVWSL
Trigger: CAAGCTCCACACGAAGACCAATCTGAAGAAATGCAT...ACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACCCTTTTAGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR TCA 72 bp CTGTGTAGGAAAAAGTTTCTCTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATGCATCTGGGAGCATCT +
Preference number: 3 (lower is better)
Translates to: LCRKKFLCLSGP*WGTGQMHLGAS
Trigger: AGATGCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTTTCCTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATaGCAAAGGAATGGACTCACGGAATTTTGCGGTATC +
Preference number: 3 (lower is better)
Translates to: EVIPTVGPGKVP*QRNGLTEFCGI
Trigger: GATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp AGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCAAGATCGATGAGGTCC +
Preference number: 3 (lower is better)
Translates to: SSCFKALSMFIL*PTRVTPRSMRS
Trigger: GGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR CCA 72 bp GCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGTTTCCTTGACTCTCCT +
Preference number: 3 (lower is better)
Translates to: AKVQQTEVTSFD*LSSASGFLDSP
Trigger: AGGAGAGTCAAGGAAACCGCTGGCAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCREPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 3 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR TCA 72 bp GGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATaGTCATGCTTCCATCTGAACAATGCACAAGCACGA +
Preference number: 3 (lower is better)
Translates to: GQLAPVPGTSIQ*SCFHLNNAQAR
Trigger: TCGTGCTTGTGCATTGTTCAGATGGAAGCATGATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
3UTR CCA 72 bp CATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGATCTTTGCAGAGCTCAA +
Preference number: 3 (lower is better)
Translates to: HEPCVFLSFMSK*MLTCSDLCRAQ
Trigger: TTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 3 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESATTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 3 (lower is better)
Translates to: LPGTEHRGNTNCRPRESARLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 3 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDEKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR GCA 72 bp AAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGAAGTCACGAGTTTCGA +
Preference number: 3 (lower is better)
Translates to: KKGNNIWPSPTG*QSSTNRSHEFR
Trigger: TCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 3 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 3 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp TCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTTGTACTGTTAAGACAA +
Preference number: 3 (lower is better)
Translates to: SQPWVLSILHTH*VLKEAVVLLRQ
Trigger: TTGTCTTAACAGTACAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp GTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCTCAAGACATCTTCAAT +
Preference number: 3 (lower is better)
Translates to: VFLSFMSKWMLT*SDLCRAQDIFN
Trigger: ATTGAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR GCA 72 bp AACTATGTTATCAGCTCTTTAGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGTGGCTTGGAGTATCTT +
Preference number: 3 (lower is better)
Translates to: NYVISSLVLQPA*LWLVACGLEYL
Trigger: AAGATACTCCAAGCCACATGCCACTAACCACAAGCAAGCTGGCTGCAAGACTAAAGAGCTGATAACATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CCA 72 bp TCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAAGGCTTATTTGAGATT +
Preference number: 3 (lower is better)
Translates to: SSQSATSGLVHR*TGLVVKGLFEI
Trigger: AATCTCAAATAAGCCTTTTACAACTAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: TKSHCQINWIMLACSITEQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 3 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR TCA 72 bp GGTTTGGTAAGTGACTGCCATCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCACCCAAGTTTAGACTTT +
Preference number: 3 (lower is better)
Translates to: GLVSDCHRSHCP*RPLYVHPSLDF
Trigger: AAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGGCAGTCACTTACCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
3UTR-3UTR CAA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 3 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 3 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 3 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 3 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSERLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 72 bp GTTACAGGAACGATAAACAAAATCACCAATACAGCATaGATTAGAAATCAAAGTGATGAGATCTGCGGAAGT +
Preference number: 3 (lower is better)
Translates to: VTGTINKITNTA*IRNQSDEICGS
Trigger: ACTTCCGCAGATCTCATCACTTTGATTTCTAATCCATGCTGTATTGGTGATTTTGTTTATCGTTCCTGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR CCA 72 bp AATTGGCATGAACAAAGAGTTCCAGAGTGGAATCAATaGACAGGGATTGTTGTAATTTTGAACATAAAACGG +
Preference number: 3 (lower is better)
Translates to: NWHEQRVPEWNQ*TGIVVILNIKR
Trigger: CCGTTTTATGTTCAAAATTACAACAATCCCTGTCCATTGATTCCACTCTGGAACTCTTTGTTCATGCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
3UTR-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 3 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 3 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGCGCCGCCCAGCCTGTTaGGCGATGGGGACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGRRPAC*AMGTGC
Trigger: GCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCG...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGAGGCTGCGGCCTCTTaGCGTCCTCGCCTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCEAAAS*RPRLRR
Trigger: GCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGAGGAAGGACAGGCGTaGAGCCCGGCCCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAEEGQA*SPAPRC
Trigger: GCACCGAGGGGCCGGGCTGCACGCCTGTCCTTCCTC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGGCTGCGGTGCGAGGTaGCCGTGGAGCAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAGCGAR*PWSRRP
Trigger: GGGCCGTCTGCTCCACGGCCACCTCGCACCGCAGCC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAARAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGAAGGGTCCGGATCTaGCTGGCCCTCCGCGGCACC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGRVRI*LALRGT
Trigger: GGTGCCGCGGAGGGCCAGCCAGATCCGGACCCTTCC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGCCGGCCCTGATGTCTaGAGGGCCGTGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGAGPDV*RAVMRR
Trigger: CCGCCTCATCACGGCCCTTCAGACATCAGGGCCGGC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGGCCGCGGGCGCTaGCTTCCCAGAAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAACGRGR*LPRSPL
Trigger: AAGGGGGCTTCTGGGAAGGCAGCGCCCGCGGCCACA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAASAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAASPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: DGLGGAGANSEGDRRAPCTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...ACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGTAGGCAGCCGGCCCTaGTGTCTGAAGGGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAVGSRP*CLKGRD
Trigger: ATCACGGCCCTTCAGACATCAGGGCCGGCTGCCTAC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCACATGCCAGAGAGGCTaGGGCCTCTTGCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVATCQRG*GLLPSS
Trigger: CGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCATGT...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGCGGTGACGCACAAGTaGAGGTGTCAGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGAVTHK*RCQQGP
Trigger: GGGGCCCTGCTGACACCTGCACTTGTGCGTCACCGC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCTCCTCGGGGAACATaGAGGGCCGCGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPPRGT*RAASWG
Trigger: CCCCCAGGACGCGGCCCTCCATGTTCCCCGAGGAGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGGGCTGAAGCGACGGTaGTTCCTCTGGCCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGGLKRR*FLWPGL
Trigger: CAACCCCGGCCAGAGGAACCACCGTCGCTTCAGCCC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGCGGGGCTGCAGACGTTaGCTGCCTACTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGRGCRR*LPTHPG
Trigger: CCCTGGGTGAGTAGGCAGCCAACGTCTGCAGCCCCG...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCAGGTCAGAGTGGGGCTaGAGCGACGGTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVARSEWG*SDGGSS
Trigger: AGAGGAACCACCGTCGCTTCAGCCCCACTCTGACCT...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGTGGGGAACGGTGGATaGCAGAGTTCCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAVGNGG*QSSHLC
Trigger: GCAGAGGTGGGAACTCTGTCATCCACCGTTCCCCAC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRICPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGCTGGGGTGACAGGCTaGGGTGCGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYAGVTG*GARWPW
Trigger: CCACGGCCACCTCGCACCGCAGCCTGTCACCCCAGC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGAGCATAGCTGGGCATaGCAGACCCAGCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAEHSWA*QTQRAG
Trigger: ACCAGCACGCTGGGTCTGGCATGCCCAGCTATGCTC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGCTGCGCGGCATGGCTaGCTGTGTCAGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAAARHG*LCQRCW
Trigger: CCAACACCTCTGACACAGGCAGCCATGCCGCGCAGC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCCTCCTCGGGGAACATaGAGGGCCGCGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHPPRGT*RAASWG
Trigger: CCCCCAGGACGCGGCCCTCCATGTTCCCCGAGGAGG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRRGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGGGCTGCGGTGCGAGGTaGCCGTGGAGCAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKGCGAR*PWSRRP
Trigger: GGGCCGTCTGCTCCACGGCCACCTCGCACCGCAGCC...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCTGTAGAGCTTCCGCTTaGGCCCCGGGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVACRASA*APGTRR
Trigger: CCTTCGAGTACCCGGGGCCCAAGCGGAAGCTCTACA...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCTCCCTGGGCTTACACTaGACCTCCTCCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVASLGLH*TSSTHS
Trigger: GGAGTGCGTGGAGGAGGTCCAGTGTAAGCCCAGGGA...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGGCCAACAGCAGAGGTaGAGGAGGAAGACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAGQQQR*RRKTLP
Trigger: GGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAADPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNREGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAGCCGGGACAGAAGCTaGCCGGTCATCGGGGATATC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSRDRS*PVIGDI
Trigger: GATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: DGLGGAGANSEGDRRAPCGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...ACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGGCTGGGGTGACAGGCTaGGGTGCGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKAGVTG*GARWPW
Trigger: CCACGGCCACCTCGCACCGCAGCCTGTCACCCCAGC...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHSAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGGGTGATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCATCCCCCAGGTCTGTaGAGAGGAAGGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGDGLGGAGANSEGDRRAHPPGL*RGRPGS
Trigger: ACTCCCCGGCCTTCCTCTCCACAGACCTGGGGGATG...AGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGCGTGGCACTCGGCATaGGGGATGACAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIAWHSA*GMTAAQ
Trigger: CTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGRAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAALLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGGGTGTGGGGAGACTaGACCCTAAGGGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGVWGD*TLREGS
Trigger: GGACCCTTCCCTTAGGGTCCAGTCTCCCCACACCCC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGGCTGCGGTGCGAGGTaGCCGTGGAGCAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFGCGAR*PWSRRP
Trigger: GGGCCGTCTGCTCCACGGCCACCTCGCACCGCAGCC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGCAGCCTGTTGAGCGATaGGGACCGGCTGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKQPVER*GPAAGP
Trigger: GGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTG...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCCCTGGGCTTACACTaGACCTCCTCCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSLGLH*TSSTHS
Trigger: GGAGTGCGTGGAGGAGGTCCAGTGTAAGCCCAGGGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGGCTCTCCTCCGTCCTaGCACCGCCCGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: AHSGVFVQEKLAAVGITSGSPPS*HRPASP
Trigger: CGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCC...GGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRILGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGCTCGAAGGCCGAGAGTaGGTCCTTGTTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGLEGRE*VLVGTK
Trigger: CTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAG...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTACCCTGTCACCGCGGTaGAGGGGGATCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRTLSPR*RGISPS
Trigger: GGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGT...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGTGTGGCCGCGGGCGCTaGCTTCCCAGAAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKCGRGR*LPRSPL
Trigger: AAGGGGGCTTCTGGGAAGGCAGCGCCCGCGGCCACA...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CAGGGTGATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: QGDGLGGAGANSEGDRRAGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...AGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp TTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGCGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRLAVAVSRGMATYCVPLRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...CAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACCTCCTCGGGGAACATaGAGGGCCGCGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSPPRGT*RAASWG
Trigger: CCCCCAGGACGCGGCCCTCCATGTTCCCCGAGGAGG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGCCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: LRLAVAVSRGMATYCVPLPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...CAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLLAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCRRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAARRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHTRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCGGGAGCGCTGGCATTaGGGTTGTTGTCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRERWH*GCCHCW
Trigger: CCAACAGTGACAACAACCTCAATGCCAGCGCTCCCG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGCCGCCCAGCCTGTTaGGCGATGGGGACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRRPAC*AMGTGC
Trigger: GCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATACAGAGTCGTCCAGCTaGGCGGCTAAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYTESSS*AAKVRG
Trigger: CCCCCTGACCTTAGCCGCTCAGCTGGACGACTCTGT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACGATGCTCAGAACTTTaGCCCTGTCACCGCGGTGAA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAARCSEL*PCHRGE
Trigger: TTCACCGCGGTGACAGGGTCAAAGTTCTGAGCATCG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCACTTCATTTTCCCTCTaGCTTTGGCAGCGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVATSFSL*LWQRSA
Trigger: AGCGGACCGCTGCCAAAGTCAGAGGGAAAATGAAGT...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGCTGGGGTGACAGGCTaGGGTGCGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEAGVTG*GARWPW
Trigger: CCACGGCCACCTCGCACCGCAGCCTGTCACCCCAGC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGAGGCTGCGGCCTCTTaGCGTCCTCGCCTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCEAAAS*RPRLRR
Trigger: GCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGGGTGTGTCAGCTTTaGCCCCTCGAAGCACGAATC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAWVCQL*PLEARI
Trigger: GATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCA...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYSMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCATCCCCCAGGTCTGTaGAGAGGAAGGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHHPPGL*RGRPGS
Trigger: ACTCCCCGGCCTTCCTCTCCACAGACCTGGGGGATG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRARGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAASRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFSPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAALPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCAGCCTGTTGAGCGATaGGGACCGGCTGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPQPVER*GPAAGP
Trigger: GGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGTCCTCGCTGGATGTTaGGCTGCGCGGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRVLAGC*AARHGC
Trigger: GCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGAC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCCATCTCGTCCTCGCTaGATGTTGGGCTGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYPSRPR*MLGCAA
Trigger: TGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGTRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRARGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESARGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: DGLGGAGANSEGDRRAPCCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...ACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACGGCGGCGTCGGGAATaGGCTCCTCCGGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRRRRRE*APPACP
Trigger: GGGACAAGCCGGAGGAGCTCATTCCCGACGCCGCCG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGAGGTGTTGGGAGACTaGGCCTCACAGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLEVLGD*ASQMAS
Trigger: AGAGGCCATCTGTGAGGCTCAGTCTCCCAACACCTC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGCTGCAGGTCATGGATaGCCACGCGGATCACCAGCG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRAAGHG*PRGSPA
Trigger: CGCTGGTGATCCGCGTGGTCATCCATGACCTGCAGC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp GGGATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCGCTGCAGGTCATGGATaGCCACGCGGATCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GITSDDGCVIQRGEAVTVAAGHG*PRGSPA
Trigger: CGCTGGTGATCCGCGTGGTCATCCATGACCTGCAGC...GACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGGTCCAGCATCTTGGTaGTCTTCTCCACCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAGPASW*SSPPSD
Trigger: ATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGVLSPA*HATPPS
Trigger: TGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGAC...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGAGGCGGCCCAGTTCTaGCACTCCCTTGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYEAAQF*HSLGLM
Trigger: CATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCTTGCCGTCCTCGCCTaGGCCGCCCAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLLAVLA*AAQPVE
Trigger: CTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp GCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCAGGTGCTCCAGGTGCTaGACGTGCCCGTACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AHSGVFVQEKLAAVGITSRCSRC*TCPYLQ
Trigger: CTGCAGGTACGGGCACGTGCAGCACCTGGAGCACCT...GGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGTGTCTGGGCACGGTaGACTTCCGAGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGVWAR*TSEHSW
Trigger: CCAGCTATGCTCGGAAGTGCACCGTGCCCAGACACC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR GCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGCCACCTCTGCCTCCATaGAGGGTGGGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKPPLPP*RVGLPR
Trigger: CCTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGG...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGCTGCGCGGCATGGCTaGCTGTGTCAGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: AHSGVFVQEKLAAVGITSAARHG*LCQRCW
Trigger: CCAACACCTCTGACACAGGCAGCCATGCCGCGCAGC...GGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp CTCGGGCAGCTTTGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAGTCCAGGTCGCTGGATGTTGGGCTaGGCGGCATGGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGQLCVGRSSHLWHGSPGRWMLG*AAWLPV
Trigger: CACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCG...ACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCATCCCCCAGGTCTGTaGAGAGGAAGGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRHPPGL*RGRPGS
Trigger: ACTCCCCGGCCTTCCTCTCCACAGACCTGGGGGATG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: HSVPDSSYPKIDEVLLLQGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...CTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RLAVAVSRGMATYCVPLGQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...ACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCCAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGAAGGGTCCGGATCTaGCTGGCCCTCCGCGGCACC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSGRVRI*LALRGT
Trigger: GGTGCCGCGGAGGGCCAGCCAGATCCGGACCCTTCC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCCTAAAGCGGAGGGATaGCCCATGTCTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIPKAEG*PMSSWL
Trigger: AAGCCAGGAAGACATGGGCCATCCCTCCGCTTTAGG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCAGCCTGTTGAGCGATaGGGACCGGCTGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLQPVER*GPAAGP
Trigger: GGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCATCTCGCCGTCCACTTaGGGTTGGTATGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCISPST*GWYGLT
Trigger: TGTCAAGCCATACCAACCCCAAGTGGACGGCGAGAT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGGAGGTGGCGGGTGTCTaGGCACGGTGCACTTCCGAG +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEEEVAGV*ARCTSE
Trigger: CTCGGAAGTGCACCGTGCCCAGACACCCGCCACCTC...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGTATACATAGGAGAATaGGTTGGAGGACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAVYIGE*VGGLGR
Trigger: CCTCCCCAGTCCTCCAACCCATTCTCCTATGTATAC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGTCTCAGGATCCCAGCTaGGTTGGTGGCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKSQDPS*VGGPVW
Trigger: CCAGACGGGGCCACCAACCCAGCTGGGATCCTGAGA...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCAGGCGTCCTCGAGCTaGCAGCTGGGAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVQASSS*QLGDAG
Trigger: CCCGGCGTCTCCCAGCTGCCAGCTCGAGGACGCCTG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656230.1
3UTR CAA 72 bp TGGCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WQTTALVLETWS*GSCTLAGSLGQ
Trigger: CTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSTRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: DGLGGAGANSEGDRRAPCGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...ACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAADAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCTGCAGCAGCTGGGGTaGCAGGCTGCGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCLQQLG*QAAVRG
Trigger: ACCTCGCACCGCAGCCTGTCACCCCAGCTGCTGCAG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp TTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTAGGGCGGTCATCCCAACAGAGTCGTCCAGCTaGGCGGCTAAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FRATWFLARAALCRAVIPTESSS*AAKVRG
Trigger: CCCCCTGACCTTAGCCGCTCAGCTGGACGACTCTGT...TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTACCCTGTCACCGCGGTaGAGGGGGATCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCTLSPR*RGISPS
Trigger: GGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGT...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGATCATGCTTCCATCTaGACAATGCACAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVADHASI*TMHKHE
Trigger: CTCGTGCTTGTGCATTGTTCAGATGGAAGCATGATC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESARLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTGAGATGGTGGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: VPGRTVKVTVVLRVPEMVGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...CACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGELFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAAGCATAGAGGCTGCTaGTCAACTGGGGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIKHRGC*STGECA
Trigger: GGCACATTCCCCAGTTGAGCAGCAGCCTCTATGCTT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGTGACAGGCTGCGGTaGGAGGTGGCCGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGDRLR*EVAVEQ
Trigger: CTGCTCCACGGCCACCTCGCACCGCAGCCTGTCACC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp CGTTCTCATCTTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCTCCAGGTGCTGCACGTaGCCGTACCTGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSHLCSTQWRVRAGEARSSRCCT*PYLQAW
Trigger: CCAGGCCTGCAGGTACGGGCACGTGCAGCACCTGGA...GCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAGATGAGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTGTGGCCGCGGGCGCTaGCTTCCCAGAAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESACGRGR*LPRSPL
Trigger: AAGGGGGCTTCTGGGAAGGCAGCGCCCGCGGCCACA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCAGTCACAGAAATGTGTaGCTTCAACAGTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVASHRNV*LQQCRT
Trigger: CGTCCTGCACTGTTGAAGGCACACATTTCTGTGACT...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESASAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSSMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACATCCCCCAGGTCTGTaGAGAGGAAGGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSHPPGL*RGRPGS
Trigger: ACTCCCCGGCCTTCCTCTCCACAGACCTGGGGGATG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNRAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRRGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGATCTCCGGGCTTCTTaGAGCGAGGCTGGCGGACTT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRDLRAS*SEAGGL
Trigger: AAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAGATC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGATCTCCGGGCTTCTTaGAGCGAGGCTGGCGGACTT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGDLRAS*SEAGGL
Trigger: AAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAGATC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTATCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRICAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCGGGATAGGCGAGCGTaGCACAATGAGACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYRDRRA*HNETCR
Trigger: CCTGCAAGTCTCATTGTGCCACGCTCGCCTATCCCG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGTCACCCAGCCACTGTaGAATGTTCACCTACTTGCA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCVTQPL*NVHLLA
Trigger: TGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGAC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGCACGTAGCTCCCAATaGTCTTCGCGGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPARSSQ*SSRPPR
Trigger: CCGAGGGGGCCGCGAAGACCATTGGGAGCTACGTGC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGCGCGGGTTTCTGCCTaGCTGTCCCTGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSARVSA*LSLGLH
Trigger: GTGTAAGCCCAGGGACAGCCAGGCAGAAACCCGCGC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGAGGTGGCGGGTGTCTaGGCACGGTGCACTTCCGAG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEEVAGV*ARCTSE
Trigger: CTCGGAAGTGCACCGTGCCCAGACACCCGCCACCTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGCGACGGTGGTTCCTCTaGCCGGGGTTGGACATCGGA +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEERRWFL*PGLDIG
Trigger: TCCGATGTCCAACCCCGGCCAGAGGAACCACCGTCG...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCGTCCTCGCTGGATGTTaGGCTGCGCGGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: FAAHSGVFVQEKLAAVGIVLAGC*AARHGC
Trigger: GCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGAC...GATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp TTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTAGGGCGGTCATCCCAACCAGCGTGTTGCCCTaGCTCTCCTCCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FRATWFLARAALCRAVIPTSVLP*LSSVLA
Trigger: TGCCAGGACGGAGGAGAGCCAGGGCAACACGCTGGT...TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCCGGGTCGTGGAAATTaGGATCCAGGCCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRPGRGN*DPGLGP
Trigger: TGGACCGAGGCCTGGATCCCAATTTCCACGACCCGG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCCTCGAGCTGGCAGCTaGGAGACGCCGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCPRAGS*ETPGGM
Trigger: CATGCCTCCCGGCGTCTCCCAGCTGCCAGCTCGAGG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAGTTTGGAAATTCTCTaGTTCCCCACAAAGCACGGG +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSLEIL*FPTKHG
Trigger: CCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAACT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCTCGAAGGCCGAGAGTaGGTCCTTGTTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLEGRE*VLVGTK
Trigger: CTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCTCGGCTGCTGCTGGCTaGGGAGGCTCCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPSAAAG*GGSLAI
Trigger: GATGGCCAGGGAGCCTCCTCAGCCAGCAGCAGCCGA...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGAGGGCAGGAGCAGCTaGCCACACGGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSEGRSS*PHGAAD
Trigger: GTCTGCAGCCCCGTGTGGTCAGCTGCTCCTGCCCTC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGCTGGAGGAGGAGGACTaGAGTATACATAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGLEEED*SIHRRM
Trigger: CATTCTCCTATGTATACTTCAGTCCTCCTCCTCCAG...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGCGGCGCGCGTCATGTaGGCCGGGCTACTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCAARVM*AGLLCF
Trigger: AAAGCAGAGTAGCCCGGCTCACATGACGCGCGCCGC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR GCA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGGAGGGCTGTGGTCGGTaGCCGCTTTGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSEEGCGR*PLWRRG
Trigger: CCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTC...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRCPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGERGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGAGGCGGCCCAGTTCTaGCACTCCCTTGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFEAAQF*HSLGLM
Trigger: CATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGTGACAGGCTGCGGTaGGAGGTGGCCGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGDRLR*EVAVEQ
Trigger: CTGCTCCACGGCCACCTCGCACCGCAGCCTGTCACC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCACGGCCCCCTCGGGCTTaGTGGGCATCTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSRPPRA*WASAAA
Trigger: TGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGGCCG...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCCTTGCCGTCCTCGCCTaGGCCGCCCAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPLAVLA*AAQPVE
Trigger: CTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAG...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGGATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCACAGTGGCGTGTTCGTaGAGGAGAAGCTCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GITSDDGCVIQRGEAVTVTVACS*RRSSQQ
Trigger: CTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGT...GACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTSMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFLLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYVETPS*LGPLRR
Trigger: TCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAAC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNSPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCCTCATGCCGGGGCCTaGGGTGGTGAGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFPHAGA*GGESCP
Trigger: CGGGCAGCTCTCACCACCCCAGGCCCCGGCATGAGG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGGCAAAGAAAGTAAGTaGCCCGAACGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYGKESK*PERRRR
Trigger: CCGCCGCCGCCGTTCGGGCCACTTACTTTCTTTGCC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACCAAGCCTTAGCATGTaGTTTGCTTGTCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAPSLSM*FACQPE
Trigger: CTCTGGTTGACAAGCAAACCACATGCTAAGGCTTGG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATGTAGAGCTTCCGCTTaGGCCCCGGGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSCRASA*APGTRR
Trigger: CCTTCGAGTACCCGGGGCCCAAGCGGAAGCTCTACA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCGGTCATCCCATCTTTaGCACGGAAGTCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYRSSHL*HGSPGE
Trigger: CTCACCTGGACTTCCGTGCCAAAGATGGGATGACCG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGGAAACCATCCGATGTaGCCGCGGGCGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCGNHPM*PRALPS
Trigger: GGAAGGCAGCGCCCGCGGCCACATCGGATGGTTTCC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGAAACCATCCGATGTaGCCGCGGGCGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGNHPM*PRALPS
Trigger: GGAAGGCAGCGCCCGCGGCCACATCGGATGGTTTCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCTGCCTGGCTGTCCCTaGGCTTACACTGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFLPGCP*AYTGPP
Trigger: AGGAGGTCCAGTGTAAGCCCAGGGACAGCCAGGCAG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CGGGTCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTGATCTTCTCTTGGGCTGCGCGGCATaGCTGCCTGTGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RVVEIGIQASVQHLGDLLLGCAA*LPVSEV
Trigger: CACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAA...GAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGCTCTCCTCCGTCCTaGCACCGCCCGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGSPPS*HRPASP
Trigger: CGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
3UTR CAA 72 bp CCATCCTGGATGGGTGCTCATGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGC +
Preference number: 4 (lower is better)
Translates to: PSWMGAHGRQLL*SWRPGAWAVAR
Trigger: GCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CAA 72 bp TGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTaGGCCTTATGGCTAGAAGACACCCTGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CQPERRPSSATP*ALWLEDTLLGC
Trigger: ACACCCCAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHWTGFW*TSALEE
Trigger: CTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESATRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPTRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCTRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLLGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGELGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTGAGATGGTGTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPGRTVKVTVVLRVPEMVLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...CACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGCGGGAGCGCTGGCATTaGGGTTGTTGTCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEERERWH*GCCHCW
Trigger: CCAACAGTGACAACAACCTCAATGCCAGCGCTCCCG...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGCTCTTAAAGCGGCTGTaGGTGGTCTGTGGGGAACGG +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEELLKRL*VVCGER
Trigger: CCGTTCCCCACAGACCACTCACAGCCGCTTTAAGAG...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp AGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGACGATGAGGTGTTGGGAGACTaGGCCTCACAGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGVFVQEKLAAVGITSDDEVLGD*ASQMAS
Trigger: AGAGGCCATCTGTGAGGCTCAGTCTCCCAACACCTC...ATCGTCGGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGSSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCAGCCGGGACAGAAGCTaGCCGGTCATCGGGGATATC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPSRDRS*PVIGDI
Trigger: GATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGCAGTCCTGTCTGCATaGAGCTGCTGTGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSAVLSA*SCCGHP
Trigger: TGGGTGACCACAGCAGCTGCATGCAGACAGGACTGC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAGGCTGCGGCCTCTTaGCGTCCTCGCCTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVEAAAS*RPRLRR
Trigger: GCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCACATGCCAGAGAGGCTaGGGCCTCTTGCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESATCQRG*GLLPSS
Trigger: CGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCATGT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCAAAGGCGACCCGACATaGCAGAGAGGCTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAKGDPT*QRGCGL
Trigger: GAGGCCGCAGCCTCTCTGGCATGTCGGGTCGCCTTT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCGCACGAGTCGGCTGCTaGTGGCTGAGGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPARVGC*WLRRLP
Trigger: AGGGAGCCTCCTCAGCCAGCAGCAGCCGACTCGTGC...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGAGGAGCACCAAGGACTaGAGGCCAACAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEERSTKD*RPTAEV
Trigger: CACCTCTGCTGTTGGCCTGCAGTCCTTGGTGCTCCT...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCTCACTCGGACCACTaGTCCTCGGGGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSHSDH*SSGSPR
Trigger: CCGTGGAGACCCCGAGGAGCAGTGGTCCGAGTGAGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HSVPDSSYPKIDEVLLLQGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...CTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGAGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: RSPEGGWLGRLKTSERAGGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...TCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTSPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCTTTCATAGTCGGCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: RPQGLGHVLFLRSCFHSRPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...CCGACTATGAAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQSAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESASMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCATCCCCCAGGTCTGTaGAGAGGAAGGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAHPPGL*RGRPGS
Trigger: ACTCCCCGGCCTTCCTCTCCACAGACCTGGGGGATG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCATCCCCCAGGTCTGTaGAGAGGAAGGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAHPPGL*RGRPGS
Trigger: ACTCCCCGGCCTTCCTCTCCACAGACCTGGGGGATG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGCGTGGCACTCGGCATaGGGGATGACAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPAWHSA*GMTAAQ
Trigger: CTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYLLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISSPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFSPPRR*FCRARW
Trigger: CCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESALVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTATTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTGGGCAGTTGCACGCTaGCTGGCTCCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDWAVAR*LAPLAR
Trigger: CCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGGGTGTGGGGAGACTaGACCCTAAGGGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGVWGD*TLREGS
Trigger: GGACCCTTCCCTTAGGGTCCAGTCTCCCCACACCCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAGGTGCGAGGTGGCCGTaGAGCAGACGGCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSGARWP*SRRPSR
Trigger: CCGACTGGGCCGTCTGCTCCACGGCCACCTCGCACC...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCACCCCCTCGGGCTTGCTaGGCATCTGCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSPPRAC*ASAAAA
Trigger: AGCTGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGG...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCGCACGTAGCTCCCAATaGTCTTCGCGGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPARSSQ*SSRPPR
Trigger: CCGAGGGGGCCGCGAAGACCATTGGGAGCTACGTGC...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGCACGTAGCTCCCAATaGTCTTCGCGGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDARSSQ*SSRPPR
Trigger: CCGAGGGGGCCGCGAAGACCATTGGGAGCTACGTGC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp TTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTAGGGCGGTCATCCCAGATCACCTCCGACGATaGCTGTGTGATACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: FRATWFLARAALCRAVIPDHLRR*LCDTAG
Trigger: CCCCGCTGTATCACACAGCCATCGTCGGAGGTGATC...TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTACCTGCAGGCCTGGTaGATCTCGTGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYYLQAW*ISCQPF
Trigger: GAACGGCTGGCACGAGATCCACCAGGCCTGCAGGTA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAGGACCCGGGGAGAGGTaGCGGGTGTCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSGPGER*RVSGHG
Trigger: ACCGTGCCCAGACACCCGCCACCTCTCCCCGGGTCC...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCGCAGCCGACCCGCCCTaGATGTGCGGAAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WNDSGSTCTCARNFHPMIAADPP*MCGRGL
Trigger: GAGGCCCCTTCCGCACATCCAGGGCGGGTCGGCTGC...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGCATCTGAGCATTCGGTaGGGGGCGTTGCACATCCCA +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEEHLSIR*GALHIP
Trigger: TGGGATGTGCAACGCCCCCCACCGAATGCTCAGATG...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCAGACAGAGTGGGGTTaGAAGGTAGGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCQTEWG*KVGSRP
Trigger: GGGCCGGCTGCCTACCTTCCAACCCCACTCTGTCTG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCAGGAAGACTCTCCCCTaGAGCCCCCGGAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPRKTLP*SPRRER
Trigger: ACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCT...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGCGTCCGCGCACACCTaGATCGGCCGCGGGAACCCG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRASAHT*IGRGNP
Trigger: CGGGTTCCCGCGGCCGATCCAGGTGTGCGCGGACGC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp TTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTAGGGCGGTCATCCCACCAACAAAAATATCCTaGCTCGGCGAGTCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: FRATWFLARAALCRAVIPPTKIS*LGESGA
Trigger: CGCCCCCGACTCGCCGAGCCAGGATATTTTTGTTGG...TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp TTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCCCGGGTCGTGGAAATTaGGATCCAGGCCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: FAAHSGVFVQEKLAAVGIPGRGN*DPGLGP
Trigger: TGGACCGAGGCCTGGATCCCAATTTCCACGACCCGG...GATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGAGATTTCCAGACCTaGCTCGGCGAGTCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCRDFQT*LGESGA
Trigger: CGCCCCCGACTCGCCGAGCCAGGTCTGGAAATCTCT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGWTGFW*TSALEE
Trigger: CTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSLGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRALGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: DWLLQYRGGWRPTASRWVGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...AACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGCGAGCGTGGCACAATaGGACTTGCAGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQASVAQ*DLQGGG
Trigger: GCCCCCACCCTGCAAGTCTCATTGTGCCACGCTCGC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAGCCTGTTTACTCGATaGGAGAGATTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSLFTR*ERFFWS
Trigger: TGACCAGAAAAATCTCTCTCATCGAGTAAACAGGCT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACTTTACGTTGTGCATTaGTATGGGCTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAALYVVH*YGLLSS
Trigger: TGAACTGAGAAGCCCATATCAATGCACAACGTAAAG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCGGGAGCGCTGGCATTaGGGTTGTTGTCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLRERWH*GCCHCW
Trigger: CCAACAGTGACAACAACCTCAATGCCAGCGCTCCCG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGCAGCAGCTGGGGTaGCAGGCTGCGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLQQLG*QAAVRG
Trigger: ACCTCGCACCGCAGCCTGTCACCCCAGCTGCTGCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGACACAGCTTGGCGGTaGCGCACAAGTGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCDTAWR*RTSAGV
Trigger: GACACCTGCACTTGTGCGTCACCGCCAAGCTGTGTC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTTGTGCTCAGGGCATTaGGGAAGAGGCACCGCGGAG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSLCSGH*GRGTAE
Trigger: CTCCGCGGTGCCTCTTCCTCAATGCCCTGAGCACAA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR GCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPVLSPA*HATPPS
Trigger: TGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGAC...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGCCGGGACAGAAGCTaGCCGGTCATCGGGGATATC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSRDRS*PVIGDI
Trigger: GATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTAAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGAGGGCTTCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RSPEGGWLGRLKTSERAGGLLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGAAGCCC...TCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACCTCCGCGGCACCGCTaGTTCCACCCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRPPRHR*FHPEQK
Trigger: CTTTTGTTCTGGGTGGAAGCAGCGGTGCCGCGGAGG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACCTCCGCGGCACCGCTaGTTCCACCCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPPPRHR*FHPEQK
Trigger: CTTTTGTTCTGGGTGGAAGCAGCGGTGCCGCGGAGG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCGGTGACAGGCTGCGGTaGGAGGTGGCCGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WNDSGSTCTCARNFHPMIGDRLR*EVAVEQ
Trigger: CTGCTCCACGGCCACCTCGCACCGCAGCCTGTCACC...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCGGCCCCCTCGGGCTTaGTGGGCATCTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWRPPRA*WASAAA
Trigger: TGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGGCCG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAAAGGCGACCCGACATaGCAGAGAGGCTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDKGDPT*QRGCGL
Trigger: GAGGCCGCAGCCTCTCTGGCATGTCGGGTCGCCTTT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGGTGTCTGGGCACGGTaGACTTCCGAGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCGVWAR*TSEHSW
Trigger: CCAGCTATGCTCGGAAGTGCACCGTGCCCAGACACC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCTGACCACACGGGGCTaGAGACGTTGGCTGCCTACT +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCLTTRG*RRWLPT
Trigger: AGTAGGCAGCCAACGTCTGCAGCCCCGTGTGGTCAG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGTGGGTGTGTCAGCTTTaGCCCCTCGAAGCACGAATC +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGWVCQL*PLEARI
Trigger: GATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCA...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDSAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLRGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSVETPS*LGPLRR
Trigger: TCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAAC...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGTGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGELVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCCTAAAGCGGAGGGATaGCCCATGTCTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFPKAEG*PMSSWL
Trigger: AAGCCAGGAAGACATGGGCCATCCCTCCGCTTTAGG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATGCATGCAGCTGCTGTaGTCACCCAGCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTCMQLL*SPSHCG
Trigger: TCCACAGTGGCTGGGTGACCACAGCAGCTGCATGCA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTGCATGCAGCTGCTGTaGTCACCCAGCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLCMQLL*SPSHCG
Trigger: TCCACAGTGGCTGGGTGACCACAGCAGCTGCATGCA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGTGCGAGGTGGCCGTaGAGCAGACGGCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGARWP*SRRPSR
Trigger: CCGACTGGGCCGTCTGCTCCACGGCCACCTCGCACC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCCCCCTCGGGCTTGCTaGGCATCTGCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISPPRAC*ASAAAA
Trigger: AGCTGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp AGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGACGATCGGTCATCCCATCTTTaGCACGGAAGTCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGVFVQEKLAAVGITSDDRSSHL*HGSPGE
Trigger: CTCACCTGGACTTCCGTGCCAAAGATGGGATGACCG...ATCGTCGGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCCGTACCTGCAGGCCTaGTGGATCTCGTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISPYLQA*WISCQP
Trigger: CGGCTGGCACGAGATCCACCAGGCCTGCAGGTACGG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCGAGTCGGCTGCTGCTaGCTGAGGAGGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIRVGCC*LRRLPG
Trigger: GCCAGGGAGCCTCCTCAGCCAGCAGCAGCCGACTCG...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGGCGTCCGCGCACACCTaGATCGGCCGCGGGAACCCG +
Preference number: 4 (lower is better)
Translates to: QAMLNVIHAFLQIGLRVEASAHT*IGRGNP
Trigger: CGGGTTCCCGCGGCCGATCCAGGTGTGCGCGGACGC...CTCCACACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCCGGTCTCCGGGTCGTaGAAATTGGGATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAPVSGS*KLGSRP
Trigger: AGGCCTGGATCCCAATTTCCACGACCCGGAGACCGG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
3UTR CAA 72 bp GTCTTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTaGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAG +
Preference number: 4 (lower is better)
Translates to: VFRATWFLARAA*CRAVIPSLARK
Trigger: CTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGCACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSEHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTGAGATGGTGTTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: VPGRTVKVTVVLRVPEMVLAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...CACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGCGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGECLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGENVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGCCGCCCAGCCTGTTaGGCGATGGGGACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRRPAC*AMGTGC
Trigger: GCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGACCCAGCGTGCTGGTaGCAAAGCCCACCCCATATT +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCDPACW*QSPPHI
Trigger: AATATGGGGTGGGCTTTGTCACCAGCACGCTGGGTC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGACCCAGCGTGCTGGTaGCAAAGCCCACCCCATATT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESADPACW*QSPPHI
Trigger: AATATGGGGTGGGCTTTGTCACCAGCACGCTGGGTC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR TCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGGGGTTGGACATCGGATaGGGCACTGATGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEEGLDIG*GTDVRT
Trigger: TGTTCTGACATCAGTGCCTCATCCGATGTCCAACCC...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CGGGTCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTGATCTTCTCTTCTTTGGAGCTGTCTaGCTCCGACCCCACGGAGTA +
Preference number: 4 (lower is better)
Translates to: RVVEIGIQASVQHLGDLLFFGAV*LRPHGV
Trigger: TACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAA...GAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGGTCTCCACGGAGACTaGGTCCGTGGGGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRGLHGD*VRGAAS
Trigger: TGAGGCCGCCCCACGGACTCAGTCTCCGTGGAGACC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAATGAACTTTCTTCTTaGACCGTGAATTCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRINELSS*TVNSRP
Trigger: TGGCCGAGAATTCACGGTTCAAGAAGAAAGTTCATT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNVLSPA*HATPPS
Trigger: TGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGAC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PAAVSKPFLCSFCARLELRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTCGTACCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSYLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYSSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDEGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDCPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCGATCTCCATGCTGCTaGCCTGGCTGCTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQRSPCC*PGCSCR
Trigger: GCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCG...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQARGGH*WAALGP
Trigger: GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCCCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ICPAAVSKPFLCSFCARLPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...GAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGATCCAAGTCCACGGATaGCAGAGGGGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVIQVHG*QRGRRD
Trigger: ATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGAT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAGCCGGGACAGAAGCTaGCCGGTCATCGGGGATATC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDSRDRS*PVIGDI
Trigger: GATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTAACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGELSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGGGCTTCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: HSVPDSSYPKIDEVLLLQGLLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGAAGCCC...CTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGGCCCCCTCGGGCTTaGTGGGCATCTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRPPRA*WASAAA
Trigger: TGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGGCCG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTACAGTGGCGTGTTCGTaGAGGAGAAGCTCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRATVACS*RRSSQQ
Trigger: CTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGCACGTGCCCGTACCTaGAGGCCTGGTGGATCTCGT +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFARART*RPGGSR
Trigger: ACGAGATCCACCAGGCCTGCAGGTACGGGCACGTGC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTCCAGGTGCTGCACGTaGCCGTACCTGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDSRCCT*PYLQAW
Trigger: CCAGGCCTGCAGGTACGGGCACGTGCAGCACCTGGA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGCTGGATGTTGGGCTaGGCGGCATGGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRWMLG*AAWLPV
Trigger: CACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp CGGGTCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTGATCTTCTCCAGGATCCGCTGCTTTaGAACCCACACTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: RVVEIGIQASVQHLGDLLQDPLL*NPHCGI
Trigger: GATGCCACAGTGTGGGTTGCAAAGCAGCGGATCCTG...GAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGGGGAGCTTTCTTCCTaGCGGTGTCGTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQGELSS*RCRRGP
Trigger: TGGACCCCGACGACACCGCCAGGAAGAAAGCTCCCC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESARRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCCTCCTCGGGGAACATaGAGGGCCGCGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLPPRGT*RAASWG
Trigger: CCCCCAGGACGCGGCCCTCCATGTTCCCCGAGGAGG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNPGLWT*NSAASQ
Trigger: CTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGATCTCCGGGCTTCTTaGAGCGAGGCTGGCGGACTT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSDLRAS*SEAGGL
Trigger: AAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAGATC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLAVAVSRGMATYCVPLGKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...ACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGAGTCATACATGGTaGGGCGGCTGCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRARSHTW*GGCLRD
Trigger: ATCCCTCAGGCAGCCGCCCCACCATGTATGACTCCT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGGGTCCGGATCTGGCTaGCCCTCCGCGGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSGSGSG*PSAAPL
Trigger: CAGCGGTGCCGCGGAGGGCCAGCCAGATCCGGACCC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGCCCATGTCTTCCTaGCTTAGTTCTTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLWPMSS*LSSLPI
Trigger: TATTGGCAAAGAACTAAGCCAGGAAGACATGGGCCA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTGCATGCAGCTGCTGTaGTCACCCAGCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLCMQLL*SPSHCG
Trigger: TCCACAGTGGCTGGGTGACCACAGCAGCTGCATGCA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCGGTTGTTGTCACTGTTaGAGCGCAGCAGGACCCGGG +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPGCCHC*SAAGPG
Trigger: CCCGGGTCCTGCTGCGCTCCAACAGTGACAACAACC...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGTTGTTGTCACTGTTaGAGCGCAGCAGGACCCGGG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGCCHC*SAAGPG
Trigger: CCCGGGTCCTGCTGCGCTCCAACAGTGACAACAACC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCCGTCCACTTGGGGTTaGTATGGCTTGACAGCGACG +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCPSTWG*YGLTAT
Trigger: CGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGCACTTGGGGTTGGTATaGCTTGACAGCGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEEHLGLV*LDSDEE
Trigger: CTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTG...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGTCTGCTGCAGGTCATaGATGACCACGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRVCCRS*MTTRIT
Trigger: GGTGATCCGCGTGGTCATCCATGACCTGCAGCAGAC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp TCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTGATCTTCTCCACCGTCTGCTGCAGGTCATaGATGACCACGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: SWKLGSRPRSSILVIFSTVCCRS*MTTRIT
Trigger: GGTGATCCGCGTGGTCATCCATGACCTGCAGCAGAC...GGTGGAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTTTATACCGGTCTCCGGGTCGTaGAAATTGGGATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TSDDGCVIQRGEAVTVFIPVSGS*KLGSRP
Trigger: AGGCCTGGATCCCAATTTCCACGACCCGGAGACCGG...TATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCACAAATTTGACTTCTaGGGACTGAACATCCAAATC +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCHKFDF*GLNIQI
Trigger: GATTTGGATGTTCAGTCCCCAGAAGTCAAATTTGTG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659264.1
3UTR CAA 72 bp GCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AAACARHEPCVF*SFMSKWMLTCS
Trigger: AGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTAAGCCGGTGTTGGTGTaGATTCTTCAATGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: DWLLQYRGGWRPTASRWVKPVLV*ILQWVC
Trigger: ACACACCCATTGAAGAATTCACACCAACACCGGCTT...AACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFVCLWA*ENRAFD
Trigger: ATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAAC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCGGGGCCTGGGGTGGTaGGAGCTGCCCGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRGLGW*ELPGKQ
Trigger: CTGCTTTCCGGGCAGCTCTCACCACCCCAGGCCCCG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRANVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACTGCAGCAGCTGGGGTaGCAGGCTGCGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKLQQLG*QAAVRG
Trigger: ACCTCGCACCGCAGCCTGTCACCCCAGCTGCTGCAG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCCACGGTGTAGTGCCTaGAAAGCTTCTTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCPRCSA*KASCCG
Trigger: ACCGCAGCAAGAAGCTTTTCAGGCACTACACCGTGG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCCGACGATGGCTGTGTaGTACAGCGGGGTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSPTMAV*YSGVRP
Trigger: CGGCCTCACCCCGCTGTATCACACAGCCATCGTCGG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCACAGGACGTGGTTCTGTaGGAACCATACGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSQDVVL*EPYGHL
Trigger: CAGGTGCCCGTATGGTTCTCACAGAACCACGTCCTG...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAATGTGGAGGCTGGAGTaGTGTGGCCCAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAMWRLE*CGPAEE
Trigger: CTCCTCAGCTGGGCCACATCACTCCAGCCTCCACAT...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCTGAGAGTCAGGGGATaGACTGGGTGCTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCLRVRG*TGCWAF
Trigger: AAATGCCCAGCACCCAGTTCATCCCCTGACTCTCAG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISVLSPA*HATPPS
Trigger: TGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGAC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTCGTACCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSYLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTCGTACCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESASYLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYLSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAALIERF*CLLISA
Trigger: GGCAGAAATCAATAGACAGCAGAATCTTTCTATCAG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRASSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVCPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRCPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPDSSYPKIDEVLLLQVWLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...CCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTAGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCTTTCATAGTCGGTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: RPQGLGHVLFLRSCFHSRSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...CCGACTATGAAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRINITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAAAGCATAGAGGCTGCTaGTCAACTGGGGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTKHRGC*STGECA
Trigger: GGCACATTCCCCAGTTGAGCAGCAGCCTCTATGCTT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGCAGTCCTGTCTGCATaGAGCTGCTGTGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWAVLSA*SCCGHP
Trigger: TGGGTGACCACAGCAGCTGCATGCAGACAGGACTGC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCAAAGGCGACCCGACATaGCAGAGAGGCTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIKGDPT*QRGCGL
Trigger: GAGGCCGCAGCCTCTCTGGCATGTCGGGTCGCCTTT...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGAGGAAGGACAGGCGTaGAGCCCGGCCCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMEEGQA*SPAPRC
Trigger: GCACCGAGGGGCCGGGCTGCACGCCTGTCCTTCCTC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR GCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAAGCAGAGGAGGGGGCTaGACATCTGAGCATTCGGTG +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSSRGGG*TSEHSV
Trigger: CACCGAATGCTCAGATGTGCAGCCCCCTCCTCTGCT...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCCAGAGTTCCCACCTCTaGCTCCATGCAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WNDSGSTCTCARNFHPMIQSSHL*LHAGWG
Trigger: GCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTG...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAAGCACGAGTCGGCTaGTGCTGGCTGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIQARVG*CWLRRL
Trigger: GAGCCTCCTCAGCCAGCAGCAGCCGACTCGTGCTTG...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp ATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: ICPAAVSKPFLCSFCARLQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...GAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGTCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSESPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQLLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPSRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRALEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGATCTCCGGGCTTCTTaGAGCGAGGCTGGCGGACTT +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQDLRAS*SEAGGL
Trigger: AAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAGATC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VPDSSYPKIDEVLLLQVWPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...CCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: DWLLQYRGGWRPTASRWVKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...AACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTGAGATGGTGGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VPGRTVKVTVVLRVPEMVEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...CACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCATTGCCAGATCAACTaGATAATGCTTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIHCQIN*IMLACS
Trigger: TGAACAAGCAAGCATTATCCAGTTGATCTGGCAATG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGAAGGGTCCGGATCTaGCTGGCCCTCCGCGGCACC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGRVRI*LALRGT
Trigger: GGTGCCGCGGAGGGCCAGCCAGATCCGGACCCTTCC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCCTAAAGCGGAGGGATaGCCCATGTCTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSPKAEG*PMSSWL
Trigger: AAGCCAGGAAGACATGGGCCATCCCTCCGCTTTAGG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTAGGCTGCTGCTCAACTaGGGAATGTGCCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFRLLLN*GMCQSR
Trigger: TCTACTTTGGCACATTCCCCAGTTGAGCAGCAGCCT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCTAGGAAAAGTGGTCTaGAAGAAACCATTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLGKVV*KKPLEA
Trigger: TGCTTCCAATGGTTTCTTCCAGACCACTTTTCCTAG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCATCTGCTGCAGCAGCTaGGGTGACAGGCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIICCSS*GDRLRC
Trigger: GCACCGCAGCCTGTCACCCCAGCTGCTGCAGCAGAT...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCCCCCTCGGGCTTGCTaGGCATCTGCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVPPRAC*ASAAAA
Trigger: AGCTGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGTCTTCAGGGCAACTTaGTTCCTCGCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSVFRAT*FLARAA
Trigger: AGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGAC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp ACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTTTATAGTCTTCAGGGCAACTTaGTTCCTCGCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSDDGCVIQRGEAVTVFIVFRAT*FLARAA
Trigger: AGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGAC...TATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGTCCCTGGGCTTACACTaGACCTCCTCCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQSLGLH*TSSTHS
Trigger: GGAGTGCGTGGAGGAGGTCCAGTGTAAGCCCAGGGA...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAGCGCGGGTTTCTGCCTaGCTGTCCCTGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSARVSA*LSLGLH
Trigger: GTGTAAGCCCAGGGACAGCCAGGCAGAAACCCGCGC...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGCGCGGGTTTCTGCCTaGCTGTCCCTGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDARVSA*LSLGLH
Trigger: GTGTAAGCCCAGGGACAGCCAGGCAGAAACCCGCGC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGATTCTGTCTGTCAGCTaGGAACCAACTGCACGTAGA +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKILSVS*EPTARR
Trigger: TCTACGTGCAGTTGGTTCCCAGCTGACAGACAGAAT...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAACTTCCGAGCATAGCTaGGCATGCCAGACCCAGCGT +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSTSEHS*ACQTQR
Trigger: ACGCTGGGTCTGGCATGCCCAGCTATGCTCGGAAGT...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCTGCACATCCCAGCACTaGGTGGGAAGGCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPCTSQH*VGRQNW
Trigger: CCAGTTCTGCCTTCCCACCCAGTGCTGGGATGTGCA...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGACGACACTTGGAATTTaGGTCTTTGCAGGTATAATT +
Preference number: 4 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGTTLGI*VFAGII
Trigger: AATTATACCTGCAAAGACCCAAATTCCAAGTGTCGT...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TCGGTCCAGCATCTTGGTGATCTTCTCCACCAAGCGATGCTGAATGTGATCCATCCATCTCGTCCTCGCTaGATGTTGGGCTGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: SVQHLGDLLHQAMLNVIHPSRPR*MLGCAA
Trigger: TGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGG...ATGGATCACATTCAGCATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSMKASLCSPKFRLSSQSTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...CGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTCACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCWTGFW*TSALEE
Trigger: CTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPVCLWA*ENRAFD
Trigger: ATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAAC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGAAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSPEGGWLGRLKTSERAGKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...TCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGGGTGATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QGDGLGGAGANSEGDRRAETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...AGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGATCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSPEGGWLGRLKTSERAGSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...TCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCCGACGATGGCTGTGTaGTACAGCGGGGTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QAMLNVIHAFLQIGLRVEPTMAV*YSGVRP
Trigger: CGGCCTCACCCCGCTGTATCACACAGCCATCGTCGG...CTCCACACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAACCCTGTCACCGCGGTaGAGGGGGATCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAETLSPR*RGISPS
Trigger: GGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAGGGGTTGGTATGGCTTaGCAGCGACGAAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSGVGMA*QRRRAS
Trigger: GGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCC...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTCATCGGATGAGGCACTaGTGTCAGAACATGTGCACG +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCHRMRH*CQNMCT
Trigger: CGTGCACATGTTCTGACATCAGTGCCTCATCCGATG...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAAAAGCAGAGGGAGGTTaGCACCCAGAGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAKAEGG*HPEAVQ
Trigger: CTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTT...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp TTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGCGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LSMKASLCSPKFRLSSQSRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...CGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTCGTACCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDSYLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTTGCGGAAGTTGGCTTaGGGGCCGGCATTCCGACTG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWLRKLA*GPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLCPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSPRRWF*RARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATAGCCGGGACAGAAGCTaGCCGGTCATCGGGGATATC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDSRDRS*PVIGDI
Trigger: GATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGTGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: CPTRVTPRSMRSSFCRFGECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...ACCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTGGAGCTTGGGCAGTTaGACGCTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLWSLGS*TLAGSL
Trigger: AAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRALMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESALMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGAGGCGGCCCAGTTCTaGCACTCCCTTGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWEAAQF*HSLGLM
Trigger: CATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCTTTCTTTACGTTGTaGATTGATATGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPFFTL*IDMGFS
Trigger: TGAGAAGCCCATATCAATGCACAACGTAAAGAAAGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGACATGCCAGAGAGGCTaGGGCCTCTTGCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLTCQRG*GLLPSS
Trigger: CGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCATGT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp TTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCAGCCGTTCTCATCTTTaGAGCACACAGTGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: FAAHSGVFVQEKLAAVGISRSHL*STQWRV
Trigger: AACACGCCACTGTGTGCTGCAAAGATGAGAACGGCT...GATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGCTGCAGACGTTGGCTaGCTACTCACCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIAADVG*LLTQGS
Trigger: ACTGCCCTGGGTGAGTAGGCAGCCAACGTCTGCAGC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGTGTGCCTTCAACAGTaGAGGACGTGGTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCVCLQQ*RTWFCE
Trigger: CTCACAGAACCACGTCCTGCACTGTTGAAGGCACAC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGACACCCAGAGGCAGTaGAGAGGAGGCCATGGGAAG +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIDTQRQ*RGGHGK
Trigger: CTTCCCATGGCCTCCTCTGCACTGCCTCTGGGTGTC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp CAAGCTCTAAAAGGGTCTTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTAGGGCCAAAGCAGGGTaGCTGGAGAGATTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QALKGSSGQLGSSLGQLCRAKAG*LERFPD
Trigger: GTCTGGAAATCTCTCCAGGCACCCTGCTTTGGCCCT...ACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACCCTTTTAGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGAGAGCGGGAATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RSPEGGWLGRLKTSERAGITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...TCCCGCTCTCTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp GTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VPDSSYPKIDEVLLLQVWITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...CCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTTGGAGTTGGGGACTTaGGGCAGTTGTAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGELELGT*GSCKWL
Trigger: CAACCACTTACAACTGCCCCAAGTCCCCAACTCCAA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGAGTTGGGGACTTaGGGCAGTTGTAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLELGT*GSCKWL
Trigger: CAACCACTTACAACTGCCCCAAGTCCCCAACTCCAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMPRCRT*WRGTPW
Trigger: CCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMSAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSAWRA*RGRRRL
Trigger: AAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTCCATGCTGCTGCCCTaGCTGCTCTTGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSMLLP*LLLPLL
Trigger: CAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGCGTGGCACTCGGCATaGGGGATGACAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSAWHSA*GMTAAQ
Trigger: CTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGCGTGGCACTCGGCATaGGGGATGACAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVAWHSA*GMTAAQ
Trigger: CTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRGGHC*AALGPL
Trigger: CAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCTCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTGAGATGGTGAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: VPGRTVKVTVVLRVPEMVNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...CACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRACAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCGGCTGCCTGAGGGATaGCTGAGCTGGAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRRLPEG*LSWRLK
Trigger: CTTGAGCCTCCAGCTCAGCCATCCCTCAGGCAGCCG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGGTCCGGATCTGGCTaGCCCTCCGCGGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGSGSG*PSAAPL
Trigger: CAGCGGTGCCGCGGAGGGCCAGCCAGATCCGGACCC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCACTCCCTTGGCCTTATaGCTAGAAGACACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESATPLAL*LEDTLL
Trigger: CAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGGGGTGCCAAGGTTTaGGAGAAACTATTGGATGGT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGGAKV*EKLLDG
Trigger: ACCATCCAATAGTTTCTCCCAAACCTTGGCACCCCC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGTCACCCAGCCACTGTaGAATGTTCACCTACTTGCA +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYVTQPL*NVHLLA
Trigger: TGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGAC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CTCCACCAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTCCGTACCTGCAGGCCTaGTGGATCTCGTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LHQAMLNVIHAFLQIGLRPYLQA*WISCQP
Trigger: CGGCTGGCACGAGATCCACCAGGCCTGCAGGTACGG...ACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTATCTCGCCGTCCACTTaGGGTTGGTATGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCISPST*GWYGLT
Trigger: TGTCAAGCCATACCAACCCCAAGTGGACGGCGAGAT...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCCTGCCTGGCTGTCCCTaGGCTTACACTGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: WNDSGSTCTCARNFHPMILPGCP*AYTGPP
Trigger: AGGAGGTCCAGTGTAAGCCCAGGGACAGCCAGGCAG...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCACTTGGGGTTGGTATaGCTTGACAGCGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSHLGLV*LDSDEE
Trigger: CTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTATAACCTTCCTGGATaGGAGGAAGGACAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVYNLPG*EEGQAC
Trigger: GCACGCCTGTCCTTCCTCCCATCCAGGAAGGTTATA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCATCCTCTGGCCGGGGTTaGACATCGGATGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSSSGRG*TSDEAL
Trigger: CAGTGCCTCATCCGATGTCCAACCCCGGCCAGAGGA...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGGTGGAGGCAGAGGCTaGAGTGATGTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIGGGRG*SDVEAG
Trigger: TCCAGCCTCCACATCACTCCAGCCTCTGCCTCCACC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CTCGGGCAGCTTTGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAGTCCAGGTCCAAAGCAGGGTGCCTaGAGAGATTTCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: LGQLCVGRSSHLWHGSPGPKQGA*RDFQTF
Trigger: AAATGTCTGGAAATCTCTCCAGGCACCCTGCTTTGG...ACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp CTCGGGCAGCTTTGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAGTCCAGGTAGATTGGTCTTCGTGTaGAGCTTGGCCAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: LGQLCVGRSSHLWHGSPGRLVFV*SLANCF
Trigger: GAAACAGTTGGCCAAGCTCCACACGAAGACCAATCT...ACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GGGATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTGCATTTCTTCAGATTaGTCTTCGTGTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GITSDDGCVIQRGEAVTVCISSD*SSCGAW
Trigger: CCAAGCTCCACACGAAGACCAATCTGAAGAAATGCA...GACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCCAAAGCAGGGTGCCTaGAGAGATTTCCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSPKQGA*RDFQTW
Trigger: CCAGGTCTGGAAATCTCTCCAGGCACCCTGCTTTGG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYLAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLTRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGATCCCGTGCAAAATTaGCGGGGAGCCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVDPVQN*RGASRT
Trigger: GGTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESADAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGACTGGAATTTTTCCTaGACGTGGAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEDWNFS*TWKHRG
Trigger: GCCTCTATGCTTCCACGTTCAGGAAAAATTCCAGTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTGTGATACAGCGGGGTaGGGCCGTAACTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRACDTAG*GRNCLY
Trigger: ATAAAGACAGTTACGGCCTCACCCCGCTGTATCACA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCACGATGCTCAGAACTTTaGCCCTGTCACCGCGGTGAA +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRARCSEL*PCHRGE
Trigger: TTCACCGCGGTGACAGGGTCAAAGTTCTGAGCATCG...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGGGTTGGTATGGCTTaGCAGCGACGAAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGVGMA*QRRRAS
Trigger: GGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGGCACTTCCTTCTTGGTaGAGGCATTTAACAAAGACT +
Preference number: 4 (lower is better)
Translates to: TVDDRVPTSASMQGGASKALPSW*RHLTKT
Trigger: AGTCTTTGTTAAATGCCTTCACCAAGAAGGAAGTGC...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCGAACATGTGCACGTGTaGGGTCCAAGGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WNDSGSTCTCARNFHPMIEHVHV*GPRSRP
Trigger: TGGCCTGGACCTTGGACCTCACACGTGCACATGTTC...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCTGGCGTTCTTTCCGGTaGGGCCCGAATCCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIWRSFR*GPNPSG
Trigger: TCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCA...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CAAGCTCTAAAAGGGTCTTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGGTCCAGCATCTTGGTaGTCTTCTCCACCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: QALKGSSGQLGSSLGQLCGPASW*SSPPSD
Trigger: ATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACC...ACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACCCTTTTAGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISSSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGATCCAAGTCCACGGATaGCAGAGGGGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWIQVHG*QRGRRD
Trigger: ATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGAT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGATCCAAGTCCACGGATaGCAGAGGGGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLIQVHG*QRGRRD
Trigger: ATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGAT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCACCAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTGCACGTGCCCGTACCTaGAGGCCTGGTGGATCTCGT +
Preference number: 4 (lower is better)
Translates to: LHQAMLNVIHAFLQIGLRARART*RPGGSR
Trigger: ACGAGATCCACCAGGCCTGCAGGTACGGGCACGTGC...ACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAGGTGCTCCAGGTGCTaGACGTGCCCGTACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKRCSRC*TCPYLQ
Trigger: CTGCAGGTACGGGCACGTGCAGCACCTGGAGCACCT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGACTCAGGGTCAACTTaGACCTGTGCCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSDSGST*TCARNF
Trigger: GAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGFRAP*AWHSAW
Trigger: CCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRLLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQSRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTAGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: PAAVSKPFLCSFCARLELGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQLAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSELAIPG*ALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTACGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: LRLAVAVSRGMATYCVPLHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...CAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTGAGATGGTGATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: VPGRTVKVTVVLRVPEMVITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...CACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSCAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAGGCTGCTGCTCAACTaGGGAATGTGCCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRLLLN*GMCQSR
Trigger: TCTACTTTGGCACATTCCCCAGTTGAGCAGCAGCCT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGATCTGCTGCAGCAGCTaGGGTGACAGGCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLICCSS*GDRLRC
Trigger: GCACCGCAGCCTGTCACCCCAGCTGCTGCAGCAGAT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCTTTGCAGCACACAGTaGCGTGTTCGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWLCSTQ*RVRAGE
Trigger: TTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCCGTCCACTTGGGGTTaGTATGGCTTGACAGCGACG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWPSTWG*YGLTAT
Trigger: CGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGATCTCGCCGTCCACTTaGGGTTGGTATGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWISPST*GWYGLT
Trigger: TGTCAAGCCATACCAACCCCAAGTGGACGGCGAGAT...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGACTTCCGAGCATAGCTaGGCATGCCAGACCCAGCGT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLTSEHS*ACQTQR
Trigger: ACGCTGGGTCTGGCATGCCCAGCTATGCTCGGAAGT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCACATAGGAGAATGGGTTaGAGGACTGGGGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAHRRMG*RTGEGT
Trigger: TGTCCCCTCCCCAGTCCTCCAACCCATTCTCCTATG...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAAAGTTCAGAAGTAACTaGGGCCAGTGTCAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSKFRSN*GQCQAA
Trigger: GGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTT...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTTCTTCCGTGACCAGCTaGGACTGGGTTTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCSSVTS*DWVSKF
Trigger: GAACTTTGAAACCCAGTCCCAGCTGGTCACGGAAGA...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTCTTCGTGTGGAGCTTaGCCAACTGTTTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGESSCGA*PTVSHR
Trigger: TCGATGAGAAACAGTTGGCCAAGCTCCACACGAAGA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACACTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: PAAVSKPFLCSFCARLELHLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGTG...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAAGCCGGTGTTGGTGTaGATTCTTCAATGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSKPVLV*ILQWVC
Trigger: ACACACCCATTGAAGAATTCACACCAACACCGGCTT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACACAGAGTTCATGTCTaGGCCCGCCGGGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQHRVHV*ARREAP
Trigger: CGGTGCTTCCCGGCGGGCTCAGACATGAACTCTGTG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFWTGFW*TSALEE
Trigger: CTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRALAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESALAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAETRHGG*QLLSAV
Trigger: GACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACTGAGATGGTGCTCATaGTCTCCGGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PAAVSKPFLCSFCARLELLRWCS*SPGFSR
Trigger: CCTCGAGAAGCCCGGAGATCATGAGCACCATCTCAG...TAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGACTGGAATTTTTCCTaGACGTGGAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCDWNFS*TWKHRG
Trigger: GCCTCTATGCTTCCACGTTCAGGAAAAATTCCAGTC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAAGTTTGGAAATTCTCTaGTTCCCCACAAAGCACGGG +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSLEIL*FPTKHG
Trigger: CCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAACT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAGTTTGGAAATTCTCTaGTTCCCCACAAAGCACGGG +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSLEIL*FPTKHG
Trigger: CCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAACT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTCGAAGGCCGAGAGTaGGTCCTTGTTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLEGRE*VLVGTK
Trigger: CTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp CCCTTACGCGAGAAAAGCAGAGGGAGGTTGACACCCAGAGGCAGTGCAGAGGAGTTAAGGGTCTTGAGTTaGGATCTTCCTGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: PLREKSRGRLTPRGSAEELRVLS*DLPGFR
Trigger: CCTAAATCCAGGAAGATCTCAACTCAAGACCCTTAA...CTCCTCTGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTTCTCGCGTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLVLSPA*HATPPS
Trigger: TGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGAC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCTCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLGRLCR*SRRALL
Trigger: CAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGAGGTGGTGGTCGCTaGTACTCCGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRGGGR*YSGCPP
Trigger: AGGTGGACAGCCGGAGTAGCAGCGACCACCACCTCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGGATGGCGACCTACTaGGTCCCGCTGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGMATY*VPLGSS
Trigger: GCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGCTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGETPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTGTTCACTGTTTGTTTaGAATCAGAACCACAACCTT +
Preference number: 4 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYCSLFV*NQNHNL
Trigger: AAGGTTGTGGTTCTGATTGCAAACAAACAGTGAACA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTGGAAGCATAGAGGCTaGTGCTCAACTGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSWKHRG*CSTGEC
Trigger: ACATTCCCCAGTTGAGCAGCAGCCTCTATGCTTCCA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTTGCCGTCCTCGCCTaGGCCGCCCAGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLAVLA*AAQPVE
Trigger: CTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR GCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAACACTGTCGTGCTCCTaGCTAGAAGCCCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSTLSCS*LEALAV
Trigger: AACAGCCAGGGCTTCTAGGCAGGAGCACGACAGTGT...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGAGGGCCAAAGCAGGGTaGCTGGAGAGATTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWRAKAG*LERFPD
Trigger: GTCTGGAAATCTCTCCAGGCACCCTGCTTTGGCCCT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTATGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTTGGAGTTGGGGACTTaGGGCAGTTGTAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNLELGT*GSCKWL
Trigger: CAACCACTTACAACTGCCCCAAGTCCCCAACTCCAA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLSPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ICPAAVSKPFLCSFCARLSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...GAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGACGGCTCCGGCGATaGCGGCGGCAAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGRLRR*RRQRGC
Trigger: GCAGCCCCTTTGCCGCCGCCATCGCCGGAGCCGTCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACCTCCTCGGGGAACATaGAGGGCCGCGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEPPRGT*RAASWG
Trigger: CCCCCAGGACGCGGCCCTCCATGTTCCCCGAGGAGG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSERAPWA*HSAWGM
Trigger: CATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDVETPS*LGPLRR
Trigger: TCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAAC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDESPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGAGCAGTCTGCGAGGTaGAGAGCAGCCGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSEQSAR*RAAVLI
Trigger: GATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGETFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFCAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCCAAGCCTTAGCATGTaGTTTGCTTGTCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCPSLSM*FACQPE
Trigger: CTCTGGTTGACAAGCAAACCACATGCTAAGGCTTGG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATTGGCCCATGTCTTCCTaGCTTAGTTCTTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYWPMSS*LSSLPI
Trigger: TATTGGCAAAGAACTAAGCCAGGAAGACATGGGCCA...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGGGGTGCCAAGGTTTaGGAGAAACTATTGGATGGT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGGAKV*EKLLDG
Trigger: ACCATCCAATAGTTTCTCCCAAACCTTGGCACCCCC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGTCTGTGGGGAACGGTaGATGACAGAGTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIVCGER*MTEFPP
Trigger: AGGTGGGAACTCTGTCATCCACCGTTCCCCACAGAC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAAATGGGTTGGAGGACTaGGGAGGGGACAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRANGLED*GGDRRE
Trigger: TTCTCTTCTGTCCCCTCCCCAGTCCTCCAACCCATT...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCCAACAGTGCAGGACGTaGTTCTGTGAGAACCATACG +
Preference number: 4 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPQQCRT*FCENHT
Trigger: CGTATGGTTCTCACAGAACCACGTCCTGCACTGTTG...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGCCCTGCTGTCATCTTaGTTTTGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIALLSS*FWTSGL
Trigger: GAGGCCAGAGGTCCAAAACCAAGATGACAGCAGGGC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTGGGCTGCGCGGCATaGCTGCCTGTGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLGCAA*LPVSEV
Trigger: CACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp CCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTTGGCCAACTGTTTCTCATCCGGCTTCTCCGCAGTaGCCCGGATCGTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: PCISSDWSSCGAWPTVSHPASPQ*PGSCHR
Trigger: TCTATGACACGATCCGGGCCACTGCGGAGAAGCCGG...ATGAGAAACAGTTGGCCAAGCTCCACACGAAGACCAATCTGAAGAAATGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACCAGCGTGTTGCCCTaGCTCTCCTCCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTSVLP*LSSVLA
Trigger: TGCCAGGACGGAGGAGAGCCAGGGCAACACGCTGGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAAGCCGGTGTTGGTGTaGATTCTTCAATGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDKPVLV*ILQWVC
Trigger: ACACACCCATTGAAGAATTCACACCAACACCGGCTT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWLAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSEKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCCCATGGAGTGGGGTTaGTGCTCACAGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRPMEWG*CSQTSL
Trigger: AAGCGAAGTCTGTGAGCATCAACCCCACTCCATGGG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGCATGTGCCCGCCATaGGCCATGCGTCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRMCPP*AMRLLV
Trigger: GACAAGAAGACGCATGGCTCATGGCGGGCACATGCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCCACGGTGTAGTGCCTaGAAAGCTTCTTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSPRCSA*KASCCG
Trigger: ACCGCAGCAAGAAGCTTTTCAGGCACTACACCGTGG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCGATGCTCAGAACTTTaGCCCTGTCACCGCGGTGAA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRCSEL*PCHRGE
Trigger: TTCACCGCGGTGACAGGGTCAAAGTTCTGAGCATCG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGCTTTAGTTCTTCCGTaGCCAGCTGGGACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIALVLP*PAGTGF
Trigger: AAACCCAGTCCCAGCTGGTCACGGAAGAACTAAAGC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTTGACTTCTGGGGACTaGACATCCAAATCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLTSGD*TSKSAE
Trigger: TTCAGCTGATTTGGATGTTCAGTCCCCAGAAGTCAA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACGGCTGCTGGGCCGCTaGTTGATGGTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQRLLGR*LMVATL
Trigger: GAGGGTGGCGACCATCAAGCAGCGGCCCAGCAGCCG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLIERF*CLLISA
Trigger: GGCAGAAATCAATAGACAGCAGAATCTTTCTATCAG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGCTGCTCTTGCCGCTaGTGCTGGTGGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGCSCR*CWWTAP
Trigger: AGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAGTCCCTTGCGGAGAGTaGCAGGGCCAGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEVPCGE*QGQRGA
Trigger: AGCTCCCCGCTGGCCCTGGCACTCTCCGCAAGGGAC...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAATCCAAGTCCACGGATaGCAGAGGGGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKIQVHG*QRGRRD
Trigger: ATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGAT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCAAAGCGAGGCCACCTaGATGCTGGGCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLQSEAT*MLGGRL
Trigger: CAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRATCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTTGTTCACTGTTTGTTTaGAATCAGAACCACAACCTT +
Preference number: 4 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRCSLFV*NQNHNL
Trigger: AAGGTTGTGGTTCTGATTGCAAACAAACAGTGAACA...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTGGAAGCATAGAGGCTaGTGCTCAACTGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISWKHRG*CSTGEC
Trigger: ACATTCCCCAGTTGAGCAGCAGCCTCTATGCTTCCA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGTTCTTGATGTATTCTaGCAGCTCAAAGTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLVLDVF*QLKVAC
Trigger: GCAGGCAACTTTGAGCTGGCAGAATACATCAAGAAC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGTCAACTTGCACCTGTaGCAGGAACTTCCATCCAAT +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSVNLHL*QELPSN
Trigger: ATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGAC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR GCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCATGGCAGAAGAGCTGTTaGCCTATGGCTTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSWQKSC*PMAFPG
Trigger: GCCAGGAAAAGCCATAGGGCAACAGCTCTTCTGCCA...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTTGGGTGTGTCAGCTTTaGCCCCTCGAAGCACGAATC +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSWVCQL*PLEARI
Trigger: GATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCA...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGTGTGTCAGCTTTaGCCCCTCGAAGCACGAATC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVWVCQL*PLEARI
Trigger: GATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGCTCCCAGGAACAGTaGGCGTCATCACGGCGATTC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGSQEQ*ASSRRF
Trigger: GAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTTGGAGTTGGGGACTTaGGGCAGTTGTAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFLELGT*GSCKWL
Trigger: CAACCACTTACAACTGCCCCAAGTCCCCAACTCCAA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACGGTGTCGGACCTGGTaGCGGGGGACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLRCRTW*RGTPWR
Trigger: CCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLASPSA*RAWRGR
Trigger: ACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACCTCCTCGGGGAACATaGAGGGCCGCGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLPPRGT*RAASWG
Trigger: CCCCCAGGACGCGGCCCTCCATGTTCCCCGAGGAGG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAELLSGP*ALDVEF
Trigger: GAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGGCCAGCGGGGAGCTaGGATCAAGCAGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGPAGS*DQAAAL
Trigger: CAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTCCCCAGAAGGGGGCTaGCTTGGAAGGCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVSPEGG*LGRLKT
Trigger: TGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTCAGTATCGAGGGGGATaGCGACCTACTGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLQYRGG*RPTASR
Trigger: GCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTG...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp TTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LRLAVAVSRGMATYCVPLGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...CAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGGAGACCTGGAGCTTaGGCAGTTGCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMWRPGA*AVARWL
Trigger: CAGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCAACTGCTCTTGTCCTaGAGACCTGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVQLLLS*RPGAWA
Trigger: TGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSSGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLREGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACAGATCCAGGCAGCATaGAGGAAAGGAGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKQIQAA*RKGGSE
Trigger: CTCGCTGCCTCCTTTCCTCCATGCTGCCTGGATCTG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGTGCGAGGTGGCCGTaGAGCAGACGGCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGARWP*SRRPSR
Trigger: CCGACTGGGCCGTCTGCTCCACGGCCACCTCGCACC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGATCACCTCCGACGATaGCTGTGTGATACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLDHLRR*LCDTAG
Trigger: CCCCGCTGTATCACACAGCCATCGTCGGAGGTGATC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCATATAACCTTCCTGGATaGGAGGAAGGACAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSYNLPG*EEGQAC
Trigger: GCACGCCTGTCCTTCCTCCCATCCAGGAAGGTTATA...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAAGGCCCGAATCCTTCTaGAATGACTCAGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRARPESF*NDSGST
Trigger: AGTTGACCCTGAGTCATTCCAGAAGGATTCGGGCCT...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CGGGTCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTGATCTTCTCTCTCATCAGAAACTGTaGAGACCAAAAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: RVVEIGIQASVQHLGDLLSHQKL*RPKESG
Trigger: GCCACTTTCTTTTGGTCTCCACAGTTTCTGATGAGA...GAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACTCACCCACGGGCTGTaGGTACTCGCGCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQLTHGL*VLAQEP
Trigger: CGGCTCCTGCGCGAGTACCCACAGCCCGTGGGTGAG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
3UTR CAA 72 bp ACAAATTCTCTCTTGCTCCAAGCCTTAGCATGTGGTTaGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TNSLLLQALACG*LVNQRGGPVLP
Trigger: TGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACCACATGCTAAGGCTTGGAGCAAGAGAGAATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCTTAAGGACCAGGTaGTTCCCTCCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQTLRTR*FPPCRI
Trigger: GATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITETWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTGTAAAGAGGTTTGTTaGGGTCGGCCTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLCKEVC*GRPWGP
Trigger: AGGCCCCCAAGGCCGACCTCAACAAACCTCTTTACA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTGCTGGGCGGCAGGCTaGGAATCTTTTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLCWAAG*ESFSML
Trigger: TAACATGGAAAAAGATTCTCAGCCTGCCGCCCAGCA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESASIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATAGATCTGCGGAAGTCTaGGAAACAAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYRSAEV*ETSLEI
Trigger: AATTTCCAAACTTGTTTCTCAGACTTCCGCAGATCT...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTTTACGTTGTGCATTaGTATGGGCTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLYVVH*YGLLSS
Trigger: TGAACTGAGAAGCCCATATCAATGCACAACGTAAAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAGGAACTTCCATCCAATaGTCATGCTTCCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSGTSIQ*SCFHLN
Trigger: GTTCAGATGGAAGCATGATCATTGGATGGAAGTTCC...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR TCA 90 bp TTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCCTACATAATCATCTTTaGCAGTTGCAGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: FAAHSGVFVQEKLAAVGILHNHL*QLQDRI
Trigger: AATCCGATCCTGCAACTGTCAAAGATGATTATGTAG...GATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGGAAGTTCACAAATTTaGCTTCTGGGGACTGAACAT +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSGSSQI*LLGTEH
Trigger: ATGTTCAGTCCCCAGAAGTCAAATTTGTGAACTTCC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLIERF*CLLISA
Trigger: GGCAGAAATCAATAGACAGCAGAATCTTTCTATCAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSGLSC*GSWLAG
Trigger: GCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSGRRRL*WRSSPP
Trigger: AGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSECPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSRPADF*WDVSMM
Trigger: CATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCT...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAATCCAAGTCCACGGATaGCAGAGGGGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEIQVHG*QRGRRD
Trigger: ATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGAT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAATCCAAGTCCACGGATaGCAGAGGGGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQIQVHG*QRGRRD
Trigger: ATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGAT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCAGCCGGGACAGAAGCTaGCCGGTCATCGGGGATATC +
Preference number: 4 (lower is better)
Translates to: ISLSMKASLCSPKFRLSSSRDRS*PVIGDI
Trigger: GATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCT...GCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGELCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATGGCACAATGAGACTTaGAGGGTGGGGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQWHNET*RVGAGR
Trigger: TCTGCCTGCCCCCACCCTGCAAGTCTCATTGTGCCA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAAGCATAGAGGCTGCTaGTCAACTGGGGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRKHRGC*STGECA
Trigger: GGCACATTCCCCAGTTGAGCAGCAGCCTCTATGCTT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGCAGTCCTGTCTGCATaGAGCTGCTGTGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMAVLSA*SCCGHP
Trigger: TGGGTGACCACAGCAGCTGCATGCAGACAGGACTGC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCAATGATCCTTCCATCTGAACAATaGACAAGCACGAGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: WNDSGSTCTCARNFHPMILPSEQ*TSTSRL
Trigger: CAGCCGACTCGTGCTTGTGCATTGTTCAGATGGAAG...GATCATTGGATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCT +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEQRGRA*RPGLSP
Trigger: AGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMQKRGF*APRNSG
Trigger: CCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMSCCGS*LAGRHS
Trigger: GGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ICPAAVSKPFLCSFCARLGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...GAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCCTCACCCGGAGCACTaGCCTCGGCGCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLPHPEH*PRRHPR
Trigger: TCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRRRDAE*QNHRLF
Trigger: GAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTGGTCGTCTCGAGGTaGTGGTCGCTGCTACTCCGG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLVVSR*WSLLLR
Trigger: CCGGAGTAGCAGCGACCACCACCTCGAGACGACCAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACGTCGCCCCACAACTTaGAGGTCCTTGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERRPTT*RSLAGE
Trigger: TTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATTCTTGGAGCGAGGCTaGCGGACTTGGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEFLERG*RTWLPL
Trigger: CAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATTCGAGGTATTGTTATaGGGTGGAGGGACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKFEVLL*GGGTPG
Trigger: CCCCGGAGTCCCTCCACCCCATAACAATACCTCGAA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCACTCCCTTGGCCTTATaGCTAGAAGACACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVTPLAL*LEDTLL
Trigger: CAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTTTGGGAGAAACTATTaGATGGTGAAGCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFFGRNY*MVKRES
Trigger: GCTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGGGGGTGCCAAGGTTTaGGAGAAACTATTGGATGGT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLGGAKV*EKLLDG
Trigger: ACCATCCAATAGTTTCTCCCAAACCTTGGCACCCCC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCAGAGTGGAATCAATaGACAGGGATTGTTGTAATT +
Preference number: 4 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLPEWNQ*TGIVVI
Trigger: AATTACAACAATCCCTGTCCATTGATTCCACTCTGG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCCAGAGTGGAATCAATaGACAGGGATTGTTGTAATT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPPEWNQ*TGIVVI
Trigger: AATTACAACAATCCCTGTCCATTGATTCCACTCTGG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCCAGAGTGGAATCAATaGACAGGGATTGTTGTAATT +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYPEWNQ*TGIVVI
Trigger: AATTACAACAATCCCTGTCCATTGATTCCACTCTGG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACCGTCCACTTGGGGTTaGTATGGCTTGACAGCGACG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEPSTWG*YGLTAT
Trigger: CGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGGACCCGGGGAGAGGTaGCGGGTGTCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLGPGER*RVSGHG
Trigger: ACCGTGCCCAGACACCCGCCACCTCTCCCCGGGTCC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CCA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCAAATGTGTCTGCAACCTaGAAGTGTCGAAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSNVSAT*KCRSCH
Trigger: ATGACAGCTTCGACACTTCCAGGTTGCAGACACATT...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTGTGTCAGAGGTGTTaGGAGACTGAGCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLCQRC*ETEPHR
Trigger: TCTGTGAGGCTCAGTCTCCCAACACCTCTGACACAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp CAAGCTCTAAAAGGGTCTTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTTTCTCATCGAGACTaGCTTGTTTATACACCCGCT +
Preference number: 4 (lower is better)
Translates to: QALKGSSGQLGSSLGQLCVSHRD*LVYTPA
Trigger: AGCGGGTGTATAAACAAGCCAGTCTCGATGAGAAAC...ACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACCCTTTTAGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGACTTGGAGCGCAGGGTaGGGGCTGTGGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLTWSAG*GLWSVP
Trigger: GGGCACCGACCACAGCCCTCACCCTGCGCTCCAAGT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATGCTGGGCCGCTGCTTaGTGGTCGCCACCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLCWAAA*WSPPSV
Trigger: AACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATCTGTCCAGCAGCTGTTTCAAAGCCCTTTCTATGTTCATTCTGTGCCCGACTCGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: ICPAAVSKPFLCSFCARLVCLWA*ENRAFD
Trigger: ATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAAC...GAGTCGGGCACAGAATGAACATAGAAAGGGCTTTGAAACAGCTGCTGGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLGSHW*IQSFPR
Trigger: CCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: LSMKASLCSPKFRLSSQSRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...CGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGAGAGGCCACAGGACTaGGGAAAGGCCTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQERPQD*GKASCR
Trigger: CCGGCATGAGGCCTTTCCTCAGTCCTGTGGCCTCTC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGCCTTTCAGGCCCATaGTGGGGCACTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMCLSGP*WGTGQM
Trigger: CATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLGASHCKPSAGERGAGEIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTCTGAGATGGTGCTCATaGTCTCCGGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLLRWCS*SPGFSR
Trigger: CCTCGAGAAGCCCGGAGATCATGAGCACCATCTCAG...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTGAGATGGTGCTCATaGTCTCCGGGCTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLRWCS*SPGFSV
Trigger: AACAGAAAAGCCCGGAGATCATGAGCACCATCTCAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATTTCTAACCTGGGTGTaGCCATCTCACTCGGACCAC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKFLTWV*PSHSDH
Trigger: GTGGTCCGAGTGAGATGGTCACACCCAGGTTAGAAA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCGTACCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSYLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAESSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSSTLD*FTSIPF
Trigger: GAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGCCCTGGCTGCTCTTaGCGCTGCTGCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITECPGCS*RCCWWT
Trigger: CGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLVASTV*TISRPA
Trigger: GGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTATCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGGGGTGGTGAGAGCTaGCCGGAAAGCAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQWGGES*PESRGR
Trigger: CCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGCCCGCCATGAGCCATaGGTCTTCTTGTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEARHEP*VFLSFM
Trigger: CATGAAGGACAAGAAGACGCATGGCTCATGGCGGGC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCTCTCCTCACGCCTCTaGTTTCACTCTGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSLSSRL*FHSDPA
Trigger: GGCAGGATCAGAGTGAAAGCAGAGGCGTGAGGAGAG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGAAATGGGGGAGAATGTaGTGGAAGCCTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLKWGRM*WKPDCV
Trigger: CACACAGTCAGGCTTCCAGCACATTCTCCCCCATTT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCCTTTCTTTACGTTGTaGATTGATATGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSPFFTL*IDMGFS
Trigger: TGAGAAGCCCATATCAATGCACAACGTAAAGAAAGG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCAGGATCCGCTGCTTTaGAACCCACACTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMQDPLL*NPHCGI
Trigger: GATGCCACAGTGTGGGTTGCAAAGCAGCGGATCCTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTTGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTCTCCCTCATCATGGTaGCCACGGTGTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLSPSSW*PRCRTW
Trigger: CCAGGTCCGACACCGTGGCCACCATGATGAGGGAGA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLGGSGA*GSISML
Trigger: CAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMVETPS*LGPLRR
Trigger: TCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAAC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSVETPS*LGPLRR
Trigger: TCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAAC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMSRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGATCTCCGGGCTTCTTaGAGCGAGGCTGGCGGACTT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLDLRAS*SEAGGL
Trigger: AAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAGATC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACCCATGATGGGGCACTaGACAAATGCATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQPMMGH*TNASGS
Trigger: GCTCCCAGATGCATTTGTCCAGTGCCCCATCATGGG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGCTGGCTGGCTCCCTTaGCCAGGTCTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQAGWLP*PGLPSI
Trigger: AATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACAGTTGCACGCTGGCTaGCTCCCTTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEQLHAG*LPWPGL
Trigger: GAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGAGACGCTGTCTCACTaGCAGCCGCATGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLETLSH*QPHVPA
Trigger: GGCGGGCACATGCGGCTGCCAGTGAGACAGCGTCTC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGAGATGCTCACCCTTaGCTGGGCACAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERDAHP*LGTELR
Trigger: CCTCAGTTCTGTGCCCAGCCAAGGGTGAGCATCTCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGCCATGCCAAAGGAATaGACTCACGGAATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRAMPKE*THGILR
Trigger: CCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: RGREALILHPGWVLMADNVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKCAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCATTGCCAGATCAACTaGATAATGCTTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLHCQIN*IMLACS
Trigger: TGAACAAGCAAGCATTATCCAGTTGATCTGGCAATG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACATTGCCAGATCAACTaGATAATGCTTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRHCQIN*IMLACS
Trigger: TGAACAAGCAAGCATTATCCAGTTGATCTGGCAATG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGGGTGTGGGGAGACTaGACCCTAAGGGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGVWGD*TLREGS
Trigger: GGACCCTTCCCTTAGGGTCCAGTCTCCCCACACCCC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGAGGCTGCTGCTCAACTaGGGAATGTGCCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRLLLN*GMCQSR
Trigger: TCTACTTTGGCACATTCCCCAGTTGAGCAGCAGCCT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGTTCACCTACTTGCATaGGTTCATGGTTGTCTACAA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDVHLLA*VHGCLQ
Trigger: TTGTAGACAACCATGAACCCATGCAAGTAGGTGAAC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACGTTGTGCATTGATATaGGCTTCTCAGTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRRCALI*ASQFRK
Trigger: TTTTCTGAACTGAGAAGCCCATATCAATGCACAACG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTTGGCCAACTGTTTCTCATCTTTGCAGCACACAGTaGCGTGTTCGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PCISSDWSSCGAWPTVSHLCSTQ*RVRAGE
Trigger: TTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAG...ATGAGAAACAGTTGGCCAAGCTCCACACGAAGACCAATCTGAAGAAATGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGAAACCATCCGATGTaGCCGCGGGCGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGNHPM*PRALPS
Trigger: GGAAGGCAGCGCCCGCGGCCACATCGGATGGTTTCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTGCCTGGCTGTCCCTaGGCTTACACTGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLPGCP*AYTGPP
Trigger: AGGAGGTCCAGTGTAAGCCCAGGGACAGCCAGGCAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGATGTCTGTTTCCTTGTaGTTCTTGATGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVMSVSL*FLMYSA
Trigger: GGCAGAATACATCAAGAACCACAAGGAAACAGACAT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp CCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTTGGCCAACTGTTTCTCATCTGTGTCAGAGGTGTTaGGAGACTGAGCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: PCISSDWSSCGAWPTVSHLCQRC*ETEPHR
Trigger: TCTGTGAGGCTCAGTCTCCCAACACCTCTGACACAG...ATGAGAAACAGTTGGCCAAGCTCCACACGAAGACCAATCTGAAGAAATGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCGGAGACTGAGTCCGTaGGGCGGCCTCATCTACTAC +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRRLSP*GGLIYY
Trigger: GTAGTAGATGAGGCCGCCCCACGGACTCAGTCTCCG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR TCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTAAGCCGGTGTTGGTGTaGATTCTTCAATGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSKPVLV*ILQWVC
Trigger: ACACACCCATTGAAGAATTCACACCAACACCGGCTT...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAAGCCGGTGTTGGTGTaGATTCTTCAATGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSKPVLV*ILQWVC
Trigger: ACACACCCATTGAAGAATTCACACCAACACCGGCTT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLVCLWA*ENRAFD
Trigger: ATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAAC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKVCLWA*ENRAFD
Trigger: ATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAAC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTATAAAACCAAAAACCTaGCATTCGAGTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSIKPKT*HSSILQ
Trigger: TTGGAGGATACTCGAATGTCAGGTTTTTGGTTTTAT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMNIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAACATCAGGGGTGTGTaGCTGGAAAAGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAENIRGV*LEKRVC
Trigger: ACACACGCGCTTTTCCAGTCACACACCCCTGATGTT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMCQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGACTGGAATTTTTCCTaGACGTGGAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRDWNFS*TWKHRG
Trigger: GCCTCTATGCTTCCACGTTCAGGAAAAATTCCAGTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGAACTACAAAAGATATaGGGACTGGAATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPELQKI*GLEFFL
Trigger: CAGGAAAAATTCCAGTCCTCATATCTTTTGTAGTTC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGAACTACAAAAGATATaGGGACTGGAATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAELQKI*GLEFFL
Trigger: CAGGAAAAATTCCAGTCCTCATATCTTTTGTAGTTC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGGGTTGGTATGGCTTaGCAGCGACGAAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGVGMA*QRRRAS
Trigger: GGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACTTCATTTTCCCTCTaGCTTTGGCAGCGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTSFSL*LWQRSA
Trigger: AGCGGACCGCTGCCAAAGTCAGAGGGAAAATGAAGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGCTATTATGGCCACCTaGAATGGAGTCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLAIMAT*NGVWLL
Trigger: CAACAGCCAGACTCCATTTCAGGTGGCCATAATAGC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTATGGGGGATGACAGCTaGTCAGCGCTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLMGDDS*SALSSS
Trigger: TGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCAT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGPRVF*LVTVGK
Trigger: CTTCCCTACGGTCACCAGGCAGAACACCCGGGGACC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLLFSVS*RLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGTTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LSMKASLCSPKFRLSSQSFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...CGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLHLHL*LLVLFL
Trigger: CAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTGGGAGCATCTCACTaGAAGCCAAGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLGASH*KPSAGE
Trigger: TTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTCATGGCAGACAACTaGTCTTGTCCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLMADN*SCPGDL
Trigger: CAGGTCTCCAGGACAAGAGCAGTTGTCTGCCATGAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGAACTGAGGATGCTGTaGCCGCCCAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEELRML*PPSSQR
Trigger: CCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTCACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTTTAGGTTTAAAATATaGTTCCCTAAAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVFRFKI*FPKAEG
Trigger: TCCCTCCGCTTTAGGGAAGCATATTTTAAACCTAAA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTGGAAGCATAGAGGCTaGTGCTCAACTGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLWKHRG*CSTGEC
Trigger: ACATTCCCCAGTTGAGCAGCAGCCTCTATGCTTCCA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGAATGTTCACCTACTTaGATGGGTTCATGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQECSPT*MGSWLS
Trigger: AGACAACCATGAACCCATGCAAGTAGGTGAACATTC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TCGGTCCAGCATCTTGGTGATCTTCTCCACCAAGCGATGCTGAATGTGATCCATAAACAGAAGCACTCTTaGACAGCTGTCCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SVQHLGDLLHQAMLNVIHKQKHS*TAVLVV
Trigger: TACAACCAGGACAGCTGTGCAAGAGTGCTTCTGTTT...ATGGATCACATTCAGCATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR GCA 90 bp CTCCACCAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTCGAATGCATTTCGTCTaGTGCAGGTCATGGATGACC +
Preference number: 4 (lower is better)
Translates to: LHQAMLNVIHAFLQIGLRRMHFV*CRSWMT
Trigger: GGTCATCCATGACCTGCAGCAGACGAAATGCATTCG...ACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTGGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGRCPL*RRGSFL
Trigger: AAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTGCAGTTGTAAGTGGTTaGGGAAGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLAVVSG*GRWWWG
Trigger: TCCCCACCACCACCTTCCCCAACCACTTACAACTGC...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTGGAGTTGGGGACTTaGGGCAGTTGTAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLLELGT*GSCKWL
Trigger: CAACCACTTACAACTGCCCCAAGTCCCCAACTCCAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACCTTCTCCCTCATCATaGTGGCCACGGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQPSPSS*WPRCRT
Trigger: GGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCGTAGACGGCTTTGCTaGCGATCTTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRRRLC*RSSPPL
Trigger: CAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACCGGGGAGTTCCTCCTaGCTTCCAGCCGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLPGSSS*LPAASH
Trigger: GTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCGG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLRAPGL*TWNSAA
Trigger: GGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEQPPCE*VDIIPG
Trigger: CCCGGGAATTATGTCCACCCACTCACAGGGCGGCTG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTTCGGAAACACCTTCTaGCACCTCGGACGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLFGNTF*HLGRRA
Trigger: AGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCACCGCCTCTTCCATaGAGCCCACCGCGACGATGG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSPPLP*SPPRRW
Trigger: CCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGTCGTCTCGAGGTGGTaGTCGCTGCTACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEVVSRW*SLLLRL
Trigger: CAGCCGGAGTAGCAGCGACCACCACCTCGAGACGAC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAAAGCTAAGCAAAGCTaGGCACGATCCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRKAKQS*ARSHPN
Trigger: GTTTGGATGGGATCGTGCCCAGCTTTGCTTAGCTTT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTGGATGGGTGCTCATaGCAGACAACTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLDGCS*QTTALV
Trigger: GACAAGAGCAGTTGTCTGCCATGAGCACCCATCCAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGTATTGTTATGGGGTaGAGGGACTCCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGIVMG*RDSGER
Trigger: TCTTTCCCCGGAGTCCCTCCACCCCATAACAATACC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTATTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGTGCGCAGACACCCTaGAAAAGGTATCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMCAQTP*KRYLGR
Trigger: CCTGCCAAGATACCTTTTCCAGGGTGTCTGCGCACA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCATTGCCAGATCAACTaGATAATGCTTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWHCQIN*IMLACS
Trigger: TGAACAAGCAAGCATTATCCAGTTGATCTGGCAATG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACTCCCTTGGCCTTATaGCTAGAAGACACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTPLAL*LEDTLL
Trigger: CAGCAGGGTGTCTTCTAGCCATAAGGCCAAGGGAGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGTTCACCTACTTGCATaGGTTCATGGTTGTCTACAA +
Preference number: 4 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQVHLLA*VHGCLQ
Trigger: TTGTAGACAACCATGAACCCATGCAAGTAGGTGAAC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAATCTGCTGCAGCAGCTaGGGTGACAGGCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLICCSS*GDRLRC
Trigger: GCACCGCAGCCTGTCACCCCAGCTGCTGCAGCAGAT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATGTAGAGCTTCCGCTTaGGCCCCGGGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSECRASA*APGTRR
Trigger: CCTTCGAGTACCCGGGGCCCAAGCGGAAGCTCTACA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCACTTGGGGTTGGTATaGCTTGACAGCGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMHLGLV*LDSDEE
Trigger: CTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CCA 90 bp GGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAATCAGAAAGTGACGACACTTaGAATTTGGGTCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFQSSEVTGASVKPPCKSESDDT*NLGLCR
Trigger: CCTGCAAAGACCCAAATTCCAAGTGTCGTCACTTTC...TGATTTACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCACCTTATAGAGTTGTCTaGTGTGGTCAGTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAPYRVV*CGQLNG
Trigger: ACCATTCAACTGACCACACCAGACAACTCTATAAGG...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CCA 90 bp CAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGACTGAGCCTCACAGATaGCCTCTTAGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: QAMLNVIHAFLQIGLRVETEPHR*PLRAGT
Trigger: AGTTCCTGCTCTAAGAGGCCATCTGTGAGGCTCAGT...CTCCACACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGTCCAGCTCTCTCCTaGAGTACATCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGPALS*STSPSP
Trigger: GGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCGGCAAAGGGGCTGCTaGCGGTCAGGCTTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLRQRGC*RSGFRQ
Trigger: CTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQQAAAL*VGGHNS
Trigger: GGAATTATGTCCACCCACTCACAGGGCGGCTGCTTG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: ISLSMKASLCSPKFRLSSGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...GCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTTACCCCAAGATCGATaGGGTCCTCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLLPQDR*GPPSAG
Trigger: ACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAA...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGGTGAGCCAGGGGTCTaGAGACCCAGCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLGEPGV*RPSHVV
Trigger: CACAACATGGCTGGGTCTTCAGACCCCTGGCTCACC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTGACTAACTCCATGTaGCATCTGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLLTNSM*HLLGHL
Trigger: AAGGTGGCCAAGCAGATGTCACATGGAGTTAGTCAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTTCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAACATCCAAATCAGCTaGAAATTCGCTTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDNIQIS*KFASLT
Trigger: TGTCAAAGAAGCGAATTTTCAGCTGATTTGGATGTT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRLSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMGGARN*RSSSVI
Trigger: AATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGTCGATCTCCATGCTaGTGCCCTGGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGRSPC*CPGCSC
Trigger: GCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGACCTGCTCTGATCTTTaGAGAGCTCAAGACATCTTC +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRTCSDL*RAQDIF
Trigger: GAAGATGTCTTGAGCTCTGCAAAGATCAGAGCAGGT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTATCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAAAGTGGCACAAAGGCTaGCTAGTAGACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQKWHKG*LVDQPL
Trigger: AAGTGGCTGGTCTACTAGGCAGCCTTTGTGCCACTT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGAATGTTCACCTACTTaGATGGGTTCATGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWECSPT*MGSWLS
Trigger: AGACAACCATGAACCCATGCAAGTAGGTGAACATTC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGCCGTTCTCATCTTTaGAGCACACAGTGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAESRSHL*STQWRV
Trigger: AACACGCCACTGTGTGCTGCAAAGATGAGAACGGCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGAATGCATTTCGTCTaGTGCAGGTCATGGATGACC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRMHFV*CRSWMT
Trigger: GGTCATCCATGACCTGCAGCAGACGAAATGCATTCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQRPVDS*SWGLGA
Trigger: TGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTCTTGCCGCTGCTGCTaGTGGACGGCTCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITESCRCC*WTAPSR
Trigger: TCGTGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGCGTGGCACTCGGCATaGGGGATGACAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLAWHSA*GMTAAQ
Trigger: CTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLAPPTK*FSGSLG
Trigger: GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATGGGGGCCTCCCCTTTaGGTCCCTGTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLWGPPL*VPVETP
Trigger: AGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGGCTGGGCCGCATTTTaGTATCAATGTAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVGWAAF*YQCKEV
Trigger: AACCTCTTTACATTGATACCAAAATGCGGCCCAGCC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGGACGGCGAGCTGTCTaGCTTCATCTCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLGRRAV*LHLHLC
Trigger: GCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGTTTGTTCATCTCTGTTaGCGAGACCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSMKASLCSPKFRLSSQSFVHLC*RDHRAW
Trigger: CCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAA...CGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAATGGCCAAAGAGCCATaGATGCAAACCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQMAKEP*MQTTGG
Trigger: TCCTCCTGTGGTTTGCATCCATGGCTCTTTGGCCAT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTATTCTCCATCCTGGATaGGTGCTCATGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSILHPG*VLMADN
Trigger: GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAAT...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGAAAGGGAATAACATCTaGCCCTCACCAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMKGNNI*PSPTGC
Trigger: GCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGAAGGAGTCATACATaGTGGGGCGGCTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGRSHT*WGGCLR
Trigger: CCTCAGGCAGCCGCCCCACCATGTATGACTCCTTCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTGGCCCATGTCTTCCTaGCTTAGTTCTTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRWPMSS*LSSLPI
Trigger: TATTGGCAAAGAACTAAGCCAGGAAGACATGGGCCA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACTGAGCCTCACAGATaGCCTCTTAGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTEPHR*PLRAGT
Trigger: AGTTCCTGCTCTAAGAGGCCATCTGTGAGGCTCAGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp ACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTTTATAGAGACCAAAAGAAAGTaGCACAGTAATTTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TSDDGCVIQRGEAVTVFIETKRK*HSNFQV
Trigger: CACTTGAAAATTACTGTGCCACTTTCTTTTGGTCTC...TATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACCGGCTTCTCCGCAGTaGCCCGGATCGTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLPASPQ*PGSCHR
Trigger: TCTATGACACGATCCGGGCCACTGCGGAGAAGCCGG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGTTTCTCATCGAGACTaGCTTGTTTATACACCCGCT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVVSHRD*LVYTPA
Trigger: AGCGGGTGTATAAACAAGCCAGTCTCGATGAGAAAC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAGATTGGTCTTCGTGTaGAGCTTGGCCAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKRLVFV*SLANCF
Trigger: GAAACAGTTGGCCAAGCTCCACACGAAGACCAATCT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTATGGCCACCTGAAATaGAGTCTGGCTGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRYGHLK*SLAVVV
Trigger: AACTACAACAGCCAGACTCCATTTCAGGTGGCCATA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
3UTR CAA 72 bp CTGTGGTCACCCAGCCACTGTGGAATGTTCACCTACTaGCATGGGTTCATGGTTGTCTACAAATACAGAAAC +
Preference number: 4 (lower is better)
Translates to: LWSPSHCGMFTY*HGFMVVYKYRN
Trigger: GTTTCTGTATTTGTAGACAACCATGAACCCATGCAAGTAGGTGAACATTCCACAGTGGCTGGGTGACCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATTGGCGGCAGAATTCTaGTTGAACGCAGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLAAEF*LNAGLI
Trigger: GATTAAGCCTGCGTTCAATCAGAATTCTGCCGCCAA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACTGAGATGGTGCTCATaGTCTCCGGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQLRWCS*SPGFLE
Trigger: CTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAECRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCCTCTGCTTTCACTCTaGTCCTGCCGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEPLLSL*SCRPPS
Trigger: AGAAGGTGGGCGGCAGGATCAGAGTGAAAGCAGAGG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGAGATCTGCGGAAGTCTaGGAAACAAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWRSAEV*ETSLEI
Trigger: AATTTCCAAACTTGTTTCTCAGACTTCCGCAGATCT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATCGTACCTCGAGGGATaGCCAGAAACGGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQSYLEG*PETGLL
Trigger: CAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISLIERF*CLLISA
Trigger: GGCAGAAATCAATAGACAGCAGAATCTTTCTATCAG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSERVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAESMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACCAAACTCCCAGCACTaGCAGGAACCTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQPNSQH*QEPHGQ
Trigger: TTGGCCATGAGGTTCCTGGCAGTGCTGGGAGTTTGG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTGTCTCAGCAGAGATaGTCACCCTTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLSQQR*SPLAGH
Trigger: GTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCCTGACTGTGTGTTTTaGGGCCCATGTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLPDCVF*GPCASG
Trigger: ACCAGATGCACATGGGCCGCAAAACACACAGTCAGG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: GLRRYLECTGVCLQELGSFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCCTCCGCGGCACCGCTaGTTCCACCCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLPPRHR*FHPEQK
Trigger: CTTTTGTTCTGGGTGGAAGCAGCGGTGCCGCGGAGG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGAATGTTCACCTACTTaGATGGGTTCATGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRECSPT*MGSWLS
Trigger: AGACAACCATGAACCCATGCAAGTAGGTGAACATTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGAGCATAGCTGGGCATaGCAGACCCAGCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLEHSWA*QTQRAG
Trigger: ACCAGCACGCTGGGTCTGGCATGCCCAGCTATGCTC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAAGCCGGCATCCAGGCTaGGCCGCATTTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQSRHPG*AAFWYQ
Trigger: TTGATACCAAAATGCGGCCCAGCCTGGATGCCGGCT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCAGAGTTGGTTGGTTaGCTGGAGTTCAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLAELVG*LEFNEG
Trigger: CCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGATCTCCGGGCTTCTTaGAGCGAGGCTGGCGGACTT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLDLRAS*SEAGGL
Trigger: AAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAGATC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTATCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 4 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTTGTCCTGGAGACCTaGAGCTTGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLVLET*SLGSCT
Trigger: CGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGACATTTTCTAAAATATaGGGCAGCCTCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLTFSKI*GSLSRP
Trigger: TGGCCTGCTGAGGCTGCCCCATATTTTAGAAAATGT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGTCACGAGTTTCGACTaGTTATCGTCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLVTSFD*LSSASG
Trigger: ACCGCTGGCAGACGATAACCAGTCGAAACTCGTGAC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGTGGTTAGTGGCATGTaGCTTGGAGTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLVVSGM*LGVSLR
Trigger: TCTTAAAGATACTCCAAGCCACATGCCACTAACCAC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACCAAGCCTTAGCATGTaGTTTGCTTGTCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEPSLSM*FACQPE
Trigger: CTCTGGTTGACAAGCAAACCACATGCTAAGGCTTGG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATTTGGGAGAAACTATTaGATGGTGAAGCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEFGRNY*MVKRES
Trigger: GCTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTAGGAAAAGTGGTCTaGAAGAAACCATTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLGKVV*KKPLEA
Trigger: TGCTTCCAATGGTTTCTTCCAGACCACTTTTCCTAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGTTGCAGGATCGGATTTTGGATAAATATTTTATCAAGACACATCGGATATGACTACCTGCAGGCCTGGTaGATCTCGTGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SCRIGFWINILSRHIGYDYLQAW*ISCQPF
Trigger: GAACGGCTGGCACGAGATCCACCAGGCCTGCAGGTA...GTCATATCCGATGTGTCTTGATAAAATATTTATCCAAAATCCGATCCTGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAATTCTGTCTGTCAGCTaGGAACCAACTGCACGTAGA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQILSVS*EPTARR
Trigger: TCTACGTGCAGTTGGTTCCCAGCTGACAGACAGAAT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CCA 90 bp CTCCACCAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTGGATCGTGTCATAGATaGTCTCTTCTTTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHQAMLNVIHAFLQIGLRGSCHR*SLLWSC
Trigger: ACAGCTCCAAAGAAGAGACCATCTATGACACGATCC...ACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTGGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQWTGFW*TSALEE
Trigger: CTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLRAPCT*DGAHDL
Trigger: GAGATCATGAGCACCATCTCAGGTACACGGAGCACG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGCACGTCTTGTTCCTaGGGTCCTGCTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGTSCS*GPAFIV
Trigger: GACTATGAAAGCAGGACCTCAGGAACAAGACGTGCC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGTGACTTTGTGCTTTaGCTAACTCCATGTGACATC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRDFVL*LTPCDI
Trigger: GATGTCACATGGAGTTAGTCAAAGCACAAAGTCACG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGATGCTCACCTGCTCTaGTCTTTGCAGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLDAHLL*SLQSSR
Trigger: TCTTGAGCTCTGCAAAGATCAGAGCAGGTGAGCATC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAGATCTGCGGAAGTCTaGGAAACAAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRSAEV*ETSLEI
Trigger: AATTTCCAAACTTGTTTCTCAGACTTCCGCAGATCT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCCACGGTGTAGTGCCTaGAAAGCTTCTTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEPRCSA*KASCCG
Trigger: ACCGCAGCAAGAAGCTTTTCAGGCACTACACCGTGG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACAAATGGAATGACTTaGGACAACACTTGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQTNGMT*DNTWSE
Trigger: CTCGCTCCAAGTGTTGTCTCAAGTCATTCCATTTGT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAELSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGATATCAAAACTATTTaGAAATTCCAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSDIKTI*KFQGRR
Trigger: CCTCCTCCCCTGGAATTTGCAAATAGTTTTGATATC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: ISLSMKASLCSPKFRLSSSMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...GCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAAGAGCTAGGATCCCGTaGAAAATTGACGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQRARIP*KIDGEP
Trigger: AGGCTCCCCGTCAATTTTGCACGGGATCCTAGCTCT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCACTGCAAGCCAAGTaGAGGAGAAAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSLQAK*RRKRGR
Trigger: CCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGGGCACTGGACAAATaGATCTGGGAGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGALDK*IWEHLT
Trigger: AGTGAGATGCTCCCAGATGCATTTGTCCAGTGCCCC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTTTAGGTTTAAAATATaGTTCCCTAAAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLFRFKI*FPKAEG
Trigger: TCCCTCCGCTTTAGGGAAGCATATTTTAAACCTAAA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGGGTGTGTCAGCTTTaGCCCCTCGAAGCACGAATC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEWVCQL*PLEARI
Trigger: GATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGGCTGTCCTCCACGTTaGACTGCTTCACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLGCPPR*TASPAS
Trigger: GGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLPADFC*DVSMMS
Trigger: CGACATCATGGACACGTCCCAGCAGAAGTCGGCTGG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITELEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLEVLG*RTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQQLGGP*LENLGH
Trigger: ATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLRGWRT*LPLVNP
Trigger: TGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACTCACAGACTTCGCTTaGCATTCAGATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQLTDFA*HSDVSA
Trigger: TGCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTGCCAGGAACCTCATaGCCAAAGAGCCATGGATGC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITELPGTS*PKSHGC
Trigger: GCATCCATGGCTCTTTGGCCATGAGGTTCCTGGCAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACATGTGACATCTGCTTaGCCACCTTGGAATTATGCT +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEHVTSA*PPWNYA
Trigger: AGCATAATTCCAAGGTGGCCAAGCAGATGTCACATG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTCAGGGGTGTGTGACTaGAAAAGCGCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITESGVCD*KSACVW
Trigger: CCACACACACGCGCTTTTCCAGTCACACACCCCTGA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCATTGCCAGATCAACTaGATAATGCTTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLHCQIN*IMLACS
Trigger: TGAACAAGCAAGCATTATCCAGTTGATCTGGCAATG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGTTGTGCATTGATATaGGCTTCTCAGTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRCALI*ASQFRK
Trigger: TTTTCTGAACTGAGAAGCCCATATCAATGCACAACG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTGCATTTCTTCAGATTaGTCTTCGTGTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMCISSD*SSCGAW
Trigger: CCAAGCTCCACACGAAGACCAATCTGAAGAAATGCA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
3UTR CAA 72 bp AAACTATGTTATCAGCTCTTTAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATGTGGCTTGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: KLCYQLFSLAAS*LVVSGMWLGVS
Trigger: AGATACTCCAAGCCACATGCCACTAACCACAAGCAAGCTGGCTGCAAGACTAAAGAGCTGATAACATAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CAA 72 bp TTTGGGAGAAACTATTGGATGGTGAAGCGGGAGAGCTaGAGGGTGAACTACAAAAGATATGAGGACTGGAAT +
Preference number: 4 (lower is better)
Translates to: FGRNYWMVKRES*RVNYKRYEDWN
Trigger: ATTCCAGTCCTCATATCTTTTGTAGTTCACCCTCAAGCTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLAGTCP*CRSACS
Trigger: AGAACATGCTGATCGACATCATGGACACGTCCCAGC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGGCAGGCAGACAGTTTaGAAGACTGGCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLGRQTV*KTGWLL
Trigger: AAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR TCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMSIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAATGTGCTGGAAGCCTaGCTGTGTGTTTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLNVLEA*LCVLRP
Trigger: GGGCCGCAAAACACACAGTCAGGCTTCCAGCACATT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGAAACTGCTGCATTATaGATTGTAACCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLETAAL*IVTTLK
Trigger: CTTCAAAGTGGTTACAATTCATAATGCAGCAGTTTC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATCCTTGACTCTCCTTTaGGCTAGTGTTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQSLTLL*ASVLPG
Trigger: GCCAGGCAAAACACTAGCTCAAAGGAGAGTCAAGGA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGCCAGCGGTTTCCTTaGCTCTCCTTTGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITECQRFP*LSFELV
Trigger: CACTAGCTCAAAGGAGAGTCAAGGAAACCGCTGGCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGCCTGTTTACTCGATaGGAGAGATTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAESLFTR*ERFFWS
Trigger: TGACCAGAAAAATCTCTCTCATCGAGTAAACAGGCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGAACTACAAAAGATATaGGGACTGGAATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVELQKI*GLEFFL
Trigger: CAGGAAAAATTCCAGTCCTCATATCTTTTGTAGTTC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCCACGGTGTAGTGCCTaGAAAGCTTCTTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLPRCSA*KASCCG
Trigger: ACCGCAGCAAGAAGCTTTTCAGGCACTACACCGTGG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTTCTTTGGAGCTGTCTaGCTCCGACCCCACGGAGTA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLFFGAV*LRPHGV
Trigger: TACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLIERF*CLLISA
Trigger: GGCAGAAATCAATAGACAGCAGAATCTTTCTATCAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATTCTCGTCCTCTTCCTaGAGGGCGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLFSSSS*RALSSL
Trigger: TAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGGCTTCTTGCTGTCTaGAGAGTTGGTTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQWLLAV*RVGWLA
Trigger: AGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRRVLIK*IAFVND
Trigger: ATCATTCACAAAAGCAATGCACTTTATCAAGACGCG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCCATCCTGGATGGGTaGTCATGGCAGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSILDG*SWQTTA
Trigger: AGCAGTTGTCTGCCATGAGCACCCATCCAGGATGGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTAGTTGTATTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: SSQSATSGLVHRWTGLVVFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...TACAACTAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACCCTCACCAACTGGCTaGCAAAGTTCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQPSPTG*QSSTNR
Trigger: TCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGCTGAATGTGATCCATaGATTTCTTCAGATTGGTCT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLAECDP*ISSDWS
Trigger: AGACCAATCTGAAGAAATGCATGGATCACATTCAGC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR GCA 90 bp CATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTTGGCCAACTGTTTCTCATCGCTGAATGTGATCCATaGATTTCTTCAGATTGGTCT +
Preference number: 4 (lower is better)
Translates to: HAFLQIGLRVELGQLFLIAECDP*ISSDWS
Trigger: AGACCAATCTGAAGAAATGCATGGATCACATTCAGC...GATGAGAAACAGTTGGCCAAGCTCCACACGAAGACCAATCTGAAGAAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQITAIP*RSYTEF
Trigger: GAACTCTGTGTACGAACGCCAAGGAATCGCCGTGAT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTGGGGCAGTTGTAAGTaGTTGGGGAAGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLWGSCK*LGKVVV
Trigger: CACCACCACCTTCCCCAACCACTTACAACTGCCCCA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLVETPS*LGPLRR
Trigger: TCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAAC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCCAATCGGCCACATCTaGTTTAGTCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEPIGHI*FSPQVD
Trigger: GTCCACCTGTGGACTAAACCAGATGTGGCCGATTGG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACAGGAGACAAACCCATaGAGTGGGGTTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLQETNP*SGVDAH
Trigger: GTGAGCATCAACCCCACTCCATGGGTTTGTCTCCTG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTAACTCAGTATTTCTTTaGGTACCAGGAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSNSVFL*VPGDKP
Trigger: GGGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTT...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGTATCTAGAGTGCACTaGTGTCTGCCTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLVSRVH*CLPTRA
Trigger: AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATAC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTCTGCTTGGCCACCTTaGAATTATGCTAACAGATTT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLSAWPP*NYANRF
Trigger: AAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGTTCACCTACTTGCATaGGTTCATGGTTGTCTACAA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMVHLLA*VHGCLQ
Trigger: TTGTAGACAACCATGAACCCATGCAAGTAGGTGAAC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCGTTGTGCATTGATATaGGCTTCTCAGTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLRCALI*ASQFRK
Trigger: TTTTCTGAACTGAGAAGCCCATATCAATGCACAACG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLWTGFW*TSALEE
Trigger: CTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAAAGGCTAAAGACATCTaGGAGAGCGGGAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLKAKDI*ESGRRR
Trigger: TCTCCTTCTCCCGCTCTCTCAGATGTCTTTAGCCTT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCGATCTCATTGTCCATaGAGGCCTCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRSHCP*RPLYVH
Trigger: GTGAACATAAAGAGGCCTTCATGGACAATGAGATCG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQCRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLLSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCCTTCCCCCGGCTTTaGCAATTTCTCTCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSFPRL*QFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATTTGAGATTGGCTGTTaGAGTATCGAGGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLFEIGC*SIEGDG
Trigger: GCCATCCCCCTCGATACTGCAACAGCCAATCTCAAA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGAGTGCACTGGTGTCTaGCTACAAGAGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLECTGV*LQELGS
Trigger: GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTCTGCTGGTTCAGATaGATCCAAATAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLCWFR*IQIRLI
Trigger: AATCAACCTTATTTGGATGCATCTGAACCAGCAGAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATTTGAGCTAGTGTTTTaGCTGGCACTGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQFELVF*LALSTE
Trigger: CTCTGTGCTCAGTGCCAGGCAAAACACTAGCTCAAA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGTCTTGCAGCCAGCTTaGTTGTGGTTAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLVLQPA*LWLVAC
Trigger: ACATGCCACTAACCACAAGCAAGCTGGCTGCAAGAC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCCTTTCTTTACGTTGTaGATTGATATGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMPFFTL*IDMGFS
Trigger: TGAGAAGCCCATATCAATGCACAACGTAAAGAAAGG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTAAACAGAAGCACTCTTaGACAGCTGTCCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLKQKHS*TAVLVV
Trigger: TACAACCAGGACAGCTGTGCAAGAGTGCTTCTGTTT...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGGTGAACTTCAGCATTaGAGGAGCCAGAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLGELQH*RSQKLP
Trigger: CGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGTAGACTCTTGGAGTTaGGGACTTGGGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLVDSWS*GLGAVV
Trigger: TACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTAC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLGFSGI*PLLLRK
Trigger: CTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGATGGGCTTCATTTTTaGCTTAGGAGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEDGLHF*LRRYWG
Trigger: CCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTGGACAAATGCATCTaGGAGCATCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITELDKCI*EHLTAS
Trigger: GCTTGCAGTGAGATGCTCCCAGATGCATTTGTCCAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTTTCTAGCACTGAAGTaGCACAAAGGCTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLFLALK*HKGCLV
Trigger: TACTAGGCAGCCTTTGTGCCACTTCAGTGCTAGAAA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTATAACACAGCTCTGCTaGTTCAGATGCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: RQISSVTGACLLDERDFSITQLC*FRCIQI
Trigger: TATTTGGATGCATCTGAACCAGCAGAGCTGTGTTAT...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLVCLWA*ENRAFD
Trigger: ATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAAC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTGCAGGTTTGGTAAGTaGCTGCCATCGATCTCATTG +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITECRFGK*LPSISL
Trigger: CAATGAGATCGATGGCAGTCACTTACCAAACCTGCA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp AGTTGCAGGATCGGATTTTGGATAAATATTTTATCAAGACACATCGGATATGACTGTGATACAGCGGGGTaGGGCCGTAACTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SCRIGFWINILSRHIGYDCDTAG*GRNCLY
Trigger: ATAAAGACAGTTACGGCCTCACCCCGCTGTATCACA...GTCATATCCGATGTGTCTTGATAAAATATTTATCCAAAATCCGATCCTGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR TCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCACTTCCTTCTTGGTaGAGGCATTTAACAAAGACT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLALPSW*RHLTKT
Trigger: AGTCTTTGTTAAATGCCTTCACCAAGAAGGAAGTGC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTCTATGTTCATTCTGTaGCCGACTCGAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITESMFIL*PTRVTP
Trigger: TGGGGTAACTCGAGTCGGGCACAGAATGAACATAGA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGAGGAGGTATCTAGAGTaGACTGGTGTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITERRYLE*TGVCLQ
Trigger: TTGTAGGCAGACACCAGTGCACTCTAGATACCTCCT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAAAGTGGATGCTCACCTaGTCTGATCTTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLKWMLT*SDLCRA
Trigger: AGCTCTGCAAAGATCAGAGCAGGTGAGCATCCACTT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATGTTCACTGTTTGTTTaGAATCAGAACCACAACCTT +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQCSLFV*NQNHNL
Trigger: AAGGTTGTGGTTCTGATTGCAAACAAACAGTGAACA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATTTAGGTTTAAAATATaGTTCCCTAAAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQFRFKI*FPKAEG
Trigger: TCCCTCCGCTTTAGGGAAGCATATTTTAAACCTAAA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGACCCAGCCATGTTGTaGACACAACTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQDPAML*TQLSIS
Trigger: AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATCCTTCATGTCAAAGTaGATGCTCACCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSESFMSK*MLTCSD
Trigger: ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAAGTACCATCTTCCCTaGCCTCCGAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLKYHLP*PPRAKG
Trigger: TCCTTTTGCTCTCGGAGGCCAGGGAAGATGGTACTT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAATACTCCATACCCACTaGGTCCTCAAAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQILHTH*VLKEAV
Trigger: AACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTAT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTTCTGTTCTCAACCCTaGGTTCTGTCTATACTCCAT +
Preference number: 4 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLFCSQP*VLSILH
Trigger: ATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTGGGGGAGAATGTGCTaGAAGCCTGACTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLWGRMC*KPDCVF
Trigger: AAACACACAGTCAGGCTTCCAGCACATTCTCCCCCA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGAAGGTCCAAAAACTTaGTTCCAACATCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQEGPKT*FQHQGC
Trigger: ACACCCCTGATGTTGGAACCAAGTTTTTGGACCTTC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGATCGTGTCATAGATaGTCTCTTCTTTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGSCHR*SLLWSC
Trigger: ACAGCTCCAAAGAAGAGACCATCTATGACACGATCC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR TCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATCCATTGTGGAATCGTaGCTTTGTGCTTTGACTAAC +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSESIVES*LCALTN
Trigger: GTTAGTCAAAGCACAAAGTCACGATTCCACAATGGA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTGAAATTGTCCTTCAATaGCGAAGTTCTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PSISLSMKASLCSPKFRLEIVLQ*RSSSKD
Trigger: ATCTTTGCTAGAACTTCGTCATTGAAGGACAATTTC...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR TCA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACTTTACGTTGTGCATTaGTATGGGCTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSELYVVH*YGLLSS
Trigger: TGAACTGAGAAGCCCATATCAATGCACAACGTAAAG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR TCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTTTCTTCTTGAACCGTaGATTCTCGGCCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEFLLEP*ILGHPF
Trigger: GAAAGGATGGCCGAGAATTCACGGTTCAAGAAGAAA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCATCTGCATAGACTGTaGAGGTGTCCACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLHLHRL*RCPHSL
Trigger: GAGAGAATGTGGACACCTGCACAGTCTATGCAGATG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGTTTGGTAAGTGACTaGCATCGATCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEGLVSD*HRSHCP
Trigger: TGGACAATGAGATCGATGGCAGTCACTTACCAAACC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTGGGAAAGCCGGTGTTaGTGTGAATTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLWESRC*CEFFNG
Trigger: CCCATTGAAGAATTCACACCAACACCGGCTTTCCCA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGACAGTTTGAAAGACTaGCTGGCTTCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLDSLKD*LASCCL
Trigger: CAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTTTGGGAGAAACTATTaGATGGTGAAGCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLFGRNY*MVKRES
Trigger: GCTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp AGTTGCAGGATCGGATTTTGGATAAATATTTTATCAAGACACATCGGATATGACTCTTCGTGTGGAGCTTaGCCAACTGTTTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: SCRIGFWINILSRHIGYDSSCGA*PTVSHR
Trigger: TCGATGAGAAACAGTTGGCCAAGCTCCACACGAAGA...GTCATATCCGATGTGTCTTGATAAAATATTTATCCAAAATCCGATCCTGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
3UTR CAA 72 bp AGAGACCGATTCATCTTGGCAACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCT +
Preference number: 4 (lower is better)
Translates to: RDRFILATCVYL*VSAGSDRSITS
Trigger: AGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGTTGCCAAGATGAATCGGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
3UTR CAA 72 bp GATAGAGACCGATTCATCTTGGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACT +
Preference number: 4 (lower is better)
Translates to: DRDRFILATCVY*LVSAGSDRSIT
Trigger: AGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGTTGCCAAGATGAATCGGTCTCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLLSIDF*LRIVPR
Trigger: TCGAGGTACGATGCGAAGGCAGAAATCAATAGACAG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGACTCCATGTGACATCTaGTTGGCCACCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLTPCDI*LATLEL
Trigger: TAATTCCAAGGTGGCCAAGCAGATGTCACATGGAGT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCATGTCAAAGTGGATaGTCACCTGCTCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSCQSG*SPALIF
Trigger: AAAGATCAGAGCAGGTGAGCATCCACTTTGACATGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGGTTTAGTCCACAGGTaGACAGGTTTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQGLVHR*TGLVVK
Trigger: TTTTACAACTAAACCTGTCCACCTGTGGACTAAACC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTAGGAAAAGTGGTCTaGAAGAAACCATTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLGKVV*KKPLEA
Trigger: TGCTTCCAATGGTTTCTTCCAGACCACTTTTCCTAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAGTTGCCTGCTATTATaGCCACCTGAAATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLSCLLL*PPEMES
Trigger: AGACTCCATTTCAGGTGGCCATAATAGCAGGCAACT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
3UTR CAA 72 bp GGAAAATCAATATTGTGGCCCACACACAAAAAGTCATaGCCAGATCAACTGGATAATGCTTGCTTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: GKSILWPTHKKS*PDQLDNACLFN
Trigger: ATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTGATTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR TCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGAGCCTGTTTACTCGATaGGAGAGATTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLSLFTR*ERFFWS
Trigger: TGACCAGAAAAATCTCTCTCATCGAGTAAACAGGCT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLNITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGAATATAACACAGCTCTaGTGGTTCAGATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITENITQL*WFRCIQ
Trigger: TTGGATGCATCTGAACCAGCAGAGCTGTGTTATATT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGATGAAGAAGAAAGATaGCTCCGGGAATGTTTCATC +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLDEEER*LRECFI
Trigger: GATGAAACATTCCCGGAGCCATCTTTCTTCTTCATC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITELIERF*CLLISA
Trigger: GGCAGAAATCAATAGACAGCAGAATCTTTCTATCAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: TKSHCQINWIMLACSITEFSRFI*CRIEFN
Trigger: ATTGAACTCTATCCTACAGCAAATGAACCGAGAGAA...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATTTTGGAGAAACTGCTaGATTATGAATTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQFWRNC*IMNCNH
Trigger: GTGGTTACAATTCATAATGCAGCAGTTTCTCCAAAA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR GCA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACACACAAAAAGTCATTaGCAGATCAACTGGATAATG +
Preference number: 4 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLHTKSH*QINWIM
Trigger: CATTATCCAGTTGATCTGGCAATGACTTTTTGTGTG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CCA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTCTGGTGACCTCTTTTaGAAATTCGAGGTATTGTTA +
Preference number: 4 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLSGDLF*KFEVLL
Trigger: TAACAATACCTCGAATTTCCAAAAGAGGTCACCAGA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 90 bp GAGGCTGCGGCCTCTTGCCGTCCTCGCCTGCGCCGCCCAGCCTGTTaGGCGATGGGGACCGGCTGCGGGGCCCGGGCACGTAGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: EAAASCRPRLRRPAC*AMGTGCGARARSSQ
Trigger: TTGGGAGCTACGTGCCCGGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS GCA 90 bp CGACCCGACATGCCAGAGAGGCTGCGGCCTCTTGCCGTCCTCGCCTaGGCCGCCCAGCCTGTTGAGCGATGGGGACCGGCTGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RPDMPERLRPLAVLA*AAQPVERWGPAAGP
Trigger: GGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCATGTCGGGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS TCA 90 bp CGGCGGCGGCGGCAGCGGCGGCCTCAGCAGCGGCGGCGTCGGGAATaGGCTCCTCCGGCTTGTCCCGACCACACGCATCTTCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: RRRRQRRPQQRRRRE*APPACPDHTHLPGK
Trigger: CTTCCCTGGAAGATGCGTGTGGTCGGGACAAGCCGGAGGAGCTCATTCCCGACGCCGCCGCTGCTGAGGCCGCCGCTGCCGCCGCCGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS GCA 90 bp TCCCGGGGCCGGCTGTGCCGCTGCTCGCGGAGGGCACTGCTGGGCTaGTCTCGGGCCCCTGGGCTTTGGACGTGGAATTCAGCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRGRLCRCSRRALLG*SRAPGLWTWNSAAS
Trigger: GGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCCGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CGGCCTCTTGCCGTCCTCGCCTGCGCCGCCCAGCCTGTTGAGCGATaGGGACCGGCTGCGGGGCCCGGGCACGTAGCTCCCAATGGTCTT +
Preference number: 5 (lower is better)
Translates to: RPLAVLACAAQPVER*GPAAGPGHVAPNGL
Trigger: AAGACCATTGGGAGCTACGTGCCCGGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAGAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS GCA 90 bp GCCCGGGCACGTAGCTCCCAATGGTCTTCGCGGCCCCCTCGGGCTTaGTGGGCATCTGCTGCAGCAGCTGGGGTGACAGGCTGCGGTGCG +
Preference number: 5 (lower is better)
Translates to: ARARSSQWSSRPPRA*WASAAAAGVTGCGA
Trigger: CGCACCGCAGCCTGTCACCCCAGCTGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGGCCGCGAAGACCATTGGGAGCTACGTGCCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS CCA 90 bp CGGAGGGCACTGCTGGGCTGCTCTCGGGCCCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAGCCTCACCCGGAGCACTGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: RRALLGCSRAPGLWT*NSAASQPHPEHWPR
Trigger: CCGAGGCCAGTGCTCCGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GTGCCGCTGCTCGCGGAGGGCACTGCTGGGCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTCAGCGGCCTCCCAGCCTCACCCGGA +
Preference number: 5 (lower is better)
Translates to: VPLLAEGTAGLLSGP*ALDVEFSGLPASPG
Trigger: TCCGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp TGCTCGCGGAGGGCACTGCTGGGCTGCTCTCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCCTCCCAGCCTCACCCGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: CSRRALLGCSRAPGL*TWNSAASQPHPEHW
Trigger: CCAGTGCTCCGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp TGCCAGGGCCAGCGGGGAGCTGGGATCAAGCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGGGCCGGCTGTGCCGCTGCTCGCGGA +
Preference number: 5 (lower is better)
Translates to: CQGQRGAGIKQPPCE*VDIIPGAGCAAARG
Trigger: TCCGCGAGCAGCGGCACAGCCGGCCCCGGGAATTATGTCCACCCACTCACAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCCTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CAGCCCGGCCCCTCGGTGCTAGAGCAGCTGGGACCCGGGGAGAGGTaGCGGGTGTCTGGGCACGGTGCACTTCCGAGCATAGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: QPGPSVLEQLGPGER*RVSGHGALPSIAGH
Trigger: ATGCCCAGCTATGCTCGGAAGTGCACCGTGCCCAGACACCCGCCACCTCTCCCCGGGTCCCAGCTGCTCTAGCACCGAGGGGCCGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468619.6
ENST00000656230.1
CDS CCA 90 bp CTCCCAGCCTCACCCGGAGCACTGGCCTCGGCGCCACCCACGAAATaGTTTTCGGGCTCCCTGGGCGTGGCACTCGGCATGGGGGATGAC +
Preference number: 5 (lower is better)
Translates to: LPASPGALASAPPTK*FSGSLGVALGMGDD
Trigger: GTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGCCGAGGCCAGTGCTCCGGGTGAGGCTGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp ATAATTCCCGGGGCCGGCTGTGCCGCTGCTCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTGGGCTTTGGACGTGGAATTCAGCGG +
Preference number: 5 (lower is better)
Translates to: IIPGAGCAAARGGHC*AALGPLGFGRGIQR
Trigger: CCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCCGGGAATTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCACTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: GCCARPAPRGDAVSLAAALLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp GACATAATTCCCGGGGCCGGCTGTGCCGCTGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCCCTGGGCTTTGGACGTGGAATTCAG +
Preference number: 5 (lower is better)
Translates to: DIIPGAGCAAARGGH*WAALGPLGFGRGIQ
Trigger: CTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCCGGGAATTATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp CCTCTCGGAAGGGCACACTGCCGGTCCAATGGGACTGCTCCCCGCTaGAGGTCCTGTGGAAGCGCGGGGCTGGAGGAAACAGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: PLGRAHCRSNGTAPR*RSCGSAGLEETGQW
Trigger: CCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCCACAGGACCTGCAGCGGGGAGCAGTCCCATTGGACCGGCAGTGTGCCCTTCCGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CCA 90 bp CTCCCTAGTGGGCAAGGCCAGGTTCCCACCCTCTGGTGGGTGGGCTaGCAGGGCCTTGCTGGGGTGGGACGCCAAGGCAACTGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: LPSGQGQVPTLWWVG*QGLAGVGRQGNCER
Trigger: CCTCTCACAGTTGCCTTGGCGTCCCACCCCAGCAAGGCCCTGCCAGCCCACCCACCAGAGGGTGGGAACCTGGCCTTGCCCACTAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS CCA 90 bp TGCTGCAGGTCATGGATGACCACGCGGATCACCAGCGTGTTGCCCTaGCTCTCCTCCGTCCTGGCACCGCCCGGCTTCTCCGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: CCRSWMTTRITSVLP*LSSVLAPPGFSAVA
Trigger: GGCCACTGCGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCCAGGGCAACACGCTGGTGATCCGCGTGGTCATCCATGACCTGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp CGCTGCAGGTCCTGTGGAAGCGCGGGGCTGGAGGAAACAGGCCAGTaGGCTCGTCCAAGTTGCAAGACTGGGCCCAGCCGATGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RCRSCGSAGLEETGQ*ARPSCKTGPSRWQG
Trigger: GCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCCACAGGACCTGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS GCA 90 bp TTCCGGTCTCGGCCCAGGTCGGTCTCGTACTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGGGTGTTCTGCCTGGTGACCGTAGGG +
Preference number: 5 (lower is better)
Translates to: FRSRPRSVSYLFSVS*RLRGPRVFCLVTVG
Trigger: CCCTACGGTCACCAGGCAGAACACCCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAAGTACGAGACCGACCTGGGCCGAGACCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp CGGAAACCCAGACAGCAGGGCGTGGCTTGTGTGGCCAGTGTGGGCTaGGCTCACCTTCCTGAGGCAGCACTGTCCAGCGCCCACCCAGTG +
Preference number: 5 (lower is better)
Translates to: RKPRQQGVACVASVG*AHLPEAALSSAHPV
Trigger: CACTGGGTGGGCGCTGGACAGTGCTGCCTCAGGAAGGTGAGCGCAGCCCACACTGGCCACACAAGCCACGCCCTGCTGTCTGGGTTTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 90 bp GGAAGCGCGGGGCTGGAGGAAACAGGCCAGTGGGCTCGTCCAAGTTaGAAGACTGGGCCCAGCCGATGGCAGGGCGATGGGAGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GSAGLEETGQWARPS*KTGPSRWQGDGREE
Trigger: CTCCTCTCTCCCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CCA 90 bp TGGCCTCGGCGCCACCCACGAAATGGTTTTCGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATGACAGCTGCTCAGCGCTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: WPRRHPRNGFRAPWA*HSAWGMTAAQRCPR
Trigger: ACGAGGACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGCCGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GAGCACTGGCCTCGGCGCCACCCACGAAATGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGGGGGATGACAGCTGCTCAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: EHWPRRHPRNGFRAP*AWHSAWGMTAAQRC
Trigger: ACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGCCGAGGCCAGTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CAGGCCCGGGTCTGCCTCCACAGCTGCGGCCTCCAGTGGTGTGTGTaGGCTGCAGCTTCAGACAGGGTCACCCTCCAGGATCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: QARVCLHSCGLQWCV*AAASDRVTLQDHCS
Trigger: GCTGCAGTGATCCTGGAGGGTGACCCTGTCTGAAGCTGCAGCCCACACACACCACTGGAGGCCGCAGCTGTGGAGGCAGACCCGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 90 bp GCTCTGCTGCAGGCCCGGGTCTGCCTCCACAGCTGCGGCCTCCAGTaGTGTGTGTGGGCTGCAGCTTCAGACAGGGTCACCCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: ALLQARVCLHSCGLQ*CVWAAASDRVTLQD
Trigger: ATCCTGGAGGGTGACCCTGTCTGAAGCTGCAGCCCACACACACCACTGGAGGCCGCAGCTGTGGAGGCAGACCCGGGCCTGCAGCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 90 bp TCACCCGGAAACCCAGACAGCAGGGCGTGGCTTGTGTGGCCAGTGTaGGCTGCGCTCACCTTCCTGAGGCAGCACTGTCCAGCGCCCACC +
Preference number: 5 (lower is better)
Translates to: SPGNPDSRAWLVWPV*AALTFLRQHCPAPT
Trigger: GGTGGGCGCTGGACAGTGCTGCCTCAGGAAGGTGAGCGCAGCCCACACTGGCCACACAAGCCACGCCCTGCTGTCTGGGTTTCCGGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp GGGGCTGGAGGAAACAGGCCAGTGGGCTCGTCCAAGTTGCAAGACTaGGCCCAGCCGATGGCAGGGCGATGGGAGAGAGGAGGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: GAGGNRPVGSSKLQD*AQPMAGRWERGGAP
Trigger: TGGGGCTCCTCCTCTCTCCCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS-3UTR CAA 90 bp GGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: GDLLRPAGFKPNRSPEGGAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...GCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGAGCGTGGCCGCCGTCCACTTGGGGTaGGTATGGCTTGACAGCGAC +
Preference number: 5 (lower is better)
Translates to: SRGGGGRLSPGAPGGSVAAVHLG*VWLDSD
Trigger: GTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGC...GGCCACGCTCCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS GCA 90 bp TACTTGTTCTCCGTCTCCTGCCGCCTCAGGGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAGCCGGCATCCAGGCTGGGCCGCATT +
Preference number: 5 (lower is better)
Translates to: YLFSVSCRLRGPRVF*LVTVGKPASRLGRI
Trigger: AATGCGGCCCAGCCTGGATGCCGGCTTCCCTACGGTCACCAGGCAGAACACCCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GGCTGTCCTCCACGTTGGACTGCTTCACCAGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGTAGACGGCTTTGCTGGCGATCTTCC +
Preference number: 5 (lower is better)
Translates to: GCPPRWTASPASPSA*RAWRGRRRLCWRSS
Trigger: GGAAGATCGCCAGCAAAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CTTCCATGGAGCCCACCGCGACGATGGTTCTGCCGGGCACGGTGGTaGGCTCGGGGGCAGCGGAGATCTGTAAAGCACCTTCGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: LPWSPPRRWFCRARW*ARGQRRSVKHLRFR
Trigger: CCGAAACCGAAGGTGCTTTACAGATCTCCGCTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCATGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GAGGGGGAGGAGGGATGCGGAATGGCAAAATCACCGCCTCTTCCATaGAGCCCACCGCGACGATGGTTCTGCCGGGCACGGTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: EGEEGCGMAKSPPLP*SPPRRWFCRARWWA
Trigger: AGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCTCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CAGCGACGAAGAGCCTCCCGGGCACGGCACTGTAGAGCTTCCGCTTaGGCCCCGGGTACTCGAAGGCCGAGAGTGAGTCCTTGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QRRRASRARHCRASA*APGTRRPRVSPCWH
Trigger: GTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGAAGCTCTACAGTGCCGTGCCCGGGAGGCTCTTCGTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS CCA 90 bp CCAATGGGACTGCTCCCCGCTGCAGGTCCTGTGGAAGCGCGGGGCTaGAGGAAACAGGCCAGTGGGCTCGTCCAAGTTGCAAGACTGGGC +
Preference number: 5 (lower is better)
Translates to: PMGLLPAAGPVEARG*RKQASGLVQVARLG
Trigger: GCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCCACAGGACCTGCAGCGGGGAGCAGTCCCATTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS-3UTR CAA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRILLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCTCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCSSCRA*SSLVAS
Trigger: GGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGA...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp GCAAAATCACCGCCTCTTCCATGGAGCCCACCGCGACGATGGTTCTaGCGGGCACGGTGGTGGGCTCGGGGGCAGCGGAGATCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: AKSPPLPWSPPRRWF*RARWWARGQRRSVK
Trigger: CTTTACAGATCTCCGCTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGATTTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp GACATTGATCCTGCTCTGCTGCAGGCCCGGGTCTGCCTCCACAGCTaGGGCCTCCAGTGGTGTGTGTGGGCTGCAGCTTCAGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: DIDPALLQARVCLHS*GLQWCVWAAASDRV
Trigger: GACCCTGTCTGAAGCTGCAGCCCACACACACCACTGGAGGCCGCAGCTGTGGAGGCAGACCCGGGCCTGCAGCAGAGCAGGATCAATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 90 bp CCTCTTCCATGGAGCCCACCGCGACGATGGTTCTGCCGGGCACGGTaGTGGGCTCGGGGGCAGCGGAGATCTGTAAAGCACCTTCGGTTT +
Preference number: 5 (lower is better)
Translates to: PLPWSPPRRWFCRAR*WARGQRRSVKHLRF
Trigger: AAACCGAAGGTGCTTTACAGATCTCCGCTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCATGGAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CGGGCTTTTGATCTCTGTGACGTCGCCCCACAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCATCCCAGGCTGGGCACTGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RAFDLCDVAPQLGGP*LENLGHPRLGTARR
Trigger: CCGCCGGGCAGTGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGTCACAGAGATCAAAAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GTGGCTACCGGGATAGGCGAGCGTGGCACAATGAGACTTGCAGGGTaGGGGCAGGCAGAGCCGGAGCCAGCCGGAGGAAGGAGTCATACA +
Preference number: 5 (lower is better)
Translates to: VATGIGERGTMRLAG*GQAEPEPAGGRSHT
Trigger: TGTATGACTCCTTCCTCCGGCTGGCTCCGGCTCTGCCTGCCCCCACCCTGCAAGTCTCATTGTGCCACGCTCGCCTATCCCGGTAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS CCA 90 bp GTCACCGCGGTGAAGGGGGATCTCGCCGTCCACTTGGGGTTGGTATaGCTTGACAGCGACGAAGAGCCTCCCGGGCACGGCACTGTAGAG +
Preference number: 5 (lower is better)
Translates to: VTAVKGDLAVHLGLV*LDSDEEPPGHGTVE
Trigger: CTCTACAGTGCCGTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCACCGCGGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CCA 90 bp GGCACTCAGGGGTTGAGATCACCCGGAAACCCAGACAGCAGGGCGTaGCTTGTGTGGCCAGTGTGGGCTGCGCTCACCTTCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GTQGLRSPGNPDSRA*LVWPVWAALTFLRQ
Trigger: CTGCCTCAGGAAGGTGAGCGCAGCCCACACTGGCCACACAAGCCACGCCCTGCTGTCTGGGTTTCCGGGTGATCTCAACCCCTGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRITSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGCGCCGCCCAGCCTGTaGAGCGATGGGGACCGGCTG +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYAPPSL*SDGDRL
Trigger: CAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGCGCCGCCCAGCCTGTaGAGCGATGGGGACCGGCTG +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLAPPSL*SDGDRL
Trigger: CAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS TCA 90 bp GGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTCTTGGAGCGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GAGANSEGDRRAPCT*DGAHDLRASWSEAG
Trigger: GCCAGCCTCGCTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp TGTGTGTGGGCTGCAGCTTCAGACAGGGTCACCCTCCAGGATCACTaGAGCCCAGCTGGCTCCATGAGAGGGAGTGCCAAGGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CVWAAASDRVTLQDH*SPAGSMRGSAKGLE
Trigger: CTCCAGCCCCTTGGCACTCCCTCTCATGGAGCCAGCTGGGCTGCAGTGATCCTGGAGGGTGACCCTGTCTGAAGCTGCAGCCCACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 90 bp TCCGCTTGGGCCCCGGGTACTCGAAGGCCGAGAGTGAGTCCTTGTTaGCACCAAGAGCAAAAGGCGACCCGACATGCCAGAGAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SAWAPGTRRPRVSPC*HQEQKATRHAREAA
Trigger: CGCAGCCTCTCTGGCATGTCGGGTCGCCTTTTGCTCTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS CCA 90 bp CCACCCTCGGTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCTCGGGTTTATCGAGCTCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PPSVPQPCSQQRGRA*RPGLSPRVYRAPPA
Trigger: AGCTGGAGGAGCTCGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424924.5
ENST00000449116.6
CDS CCA 90 bp ACCCCACGGAGTAGTCGGAGAAGCTCTGGGCCATCTCGTCCTCGCTaGATGTTGGGCTGCGCGGCATGGCTGCCTGTGTCAGAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TPRSSRRSSGPSRPR*MLGCAAWLPVSEVL
Trigger: CAACACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCCGACTACTCCGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp TGCCCTGGCTCTCCTCCGTCCTGGCACCGCCCGGCTTCTCCGCAGTaGCCCGGATCGTGTCATAGATGGTCTCTTCTTTGGAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: CPGSPPSWHRPASPQ*PGSCHRWSLLWSCL
Trigger: CAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACTGCGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCCAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp GGGTTGAGATCACCCGGAAACCCAGACAGCAGGGCGTGGCTTGTGTaGCCAGTGTGGGCTGCGCTCACCTTCCTGAGGCAGCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: GLRSPGNPDSRAWLV*PVWAALTFLRQHCP
Trigger: TGGACAGTGCTGCCTCAGGAAGGTGAGCGCAGCCCACACTGGCCACACAAGCCACGCCCTGCTGTCTGGGTTTCCGGGTGATCTCAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp GGCTCGTCCAAGTTGCAAGACTGGGCCCAGCCGATGGCAGGGCGATaGGAGAGAGGAGGAGCCCCAAAGACTCTCCTCCTGGTTGGCACA +
Preference number: 5 (lower is better)
Translates to: GSSKLQDWAQPMAGR*ERGGAPKTLLLVGT
Trigger: TGTGCCAACCAGGAGGAGAGTCTTTGGGGCTCCTCCTCTCTCCCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCCTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSLLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTATCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp CAGGGTGATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: QGDGLGGAGANSEGDRRAIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...AGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCATCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLTSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATGGTCTTCAGGGCAACTaGGTTCCTCGCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYGLQGN*VPRSGS
Trigger: GCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACC...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS TCA 90 bp GGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTCTCGAGGGATGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GAGANSEGDRRAPCT*DGAHDLRASRGMPR
Trigger: TCTGGGCATCCCTCGAGAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS TCA 90 bp ACGGGCTGCTCTCAAACCCGGCTACCTCTCGCGGCGCGCGTCATGTaGGCCGGGCTACTCTGCTTTTGTGCTCAGGGCATTGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: TGCSQTRLPLAARVM*AGLLCFCAQGIEEE
Trigger: CTCTTCCTCAATGCCCTGAGCACAAAAGCAGAGTAGCCCGGCTCACATGACGCGCGCCGCGAGAGGTAGCCGGGTTTGAGAGCAGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS GCA 90 bp TCCTCTTCCTGCAGGGCGTTGTCCAGCTTAGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCCGACTTCTGCTGGGACGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: SSSCRALSSLVASTV*TISRPADFCWDVSM
Trigger: CATGGACACGTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACACCGTGGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp GTGGCGGGTGTCTGGGCACGGTGCACTTCCGAGCATAGCTGGGCATaGCAGACCCAGCGTGCTGGTGACAAAGCCCACCCCATATTCTGT +
Preference number: 5 (lower is better)
Translates to: VAGVWARCTSEHSWA*QTQRAGDKAHPIFC
Trigger: ACAGAATATGGGGTGGGCTTTGTCACCAGCACGCTGGGTCTGGCATGCCCAGCTATGCTCGGAAGTGCACCGTGCCCAGACACCCGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468619.6
ENST00000656230.1
CDS GCA 90 bp GGGTGGTGGCCAGATGACTCCCACAGGCAGGAGGTCCCATCTCAGTaGCAGAGAAGTCCAAGTCCTCACGCTTACCCACGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: GWWPDDSHRQEVPSQ*QRSPSPHAYPRGGG
Trigger: GCCACCTCCACGTGGGTAAGCGTGAGGACTTGGACTTCTCTGGCACTGAGATGGGACCTCCTGCCTGTGGGAGTCATCTGGCCACCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 90 bp CACGGAGACAGGGACAGAGTGGGGTCCTGTCACCTGGGTAGAACGTaGCAGGCAACATCTCCAGCGCCTCAGCTTCAGCAGGTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: HGDRDRVGSCHLGRT*QATSPAPQLQQVGR
Trigger: CCTTCCCACCTGCTGAAGCTGAGGCGCTGGAGATGTTGCCTGGCACGTTCTACCCAGGTGACAGGACCCCACTCTGTCCCTGTCTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp CTGCCTTCGCATCGTACCTCGAGGGATGCCCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGGCGTCATCACGGCGATTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LPSHRTSRDAQKRGF*APRNSGRHHGDSLA
Trigger: CGCCAAGGAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000409530.5
ENST00000424924.5
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GGAGTAGTCGGAGAAGCTCTGGGCCATCTCGTCCTCGCTGGATGTTaGGCTGCGCGGCATGGCTGCCTGTGTCAGAGGTGTTGGGAGACT +
Preference number: 5 (lower is better)
Translates to: GVVGEALGHLVLAGC*AARHGCLCQRCWET
Trigger: AGTCTCCCAACACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCCGACTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp ATGGGCAAGAGGGGGAGAGCTGCAAACAGTAGAGATGCTGCCGTGTaGGGAGACTCCCTGGAGGGCAAGACTGAAGCCCCTGCCCGTCTG +
Preference number: 5 (lower is better)
Translates to: MGKRGRAANSRDAAV*GDSLEGKTEAPARL
Trigger: CAGACGGGCAGGGGCTTCAGTCTTGCCCTCCAGGGAGTCTCCCCACACGGCAGCATCTCTACTGTTTGCAGCTCTCCCCCTCTTGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLLLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: GCCARPAPRGDAVSLAAARLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYTSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRITHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGCCTGAAAAGCTTCTaGCTGCGGTCAGCGCGGGTT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLCLKSF*LRSARV
Trigger: AACCCGCGCTGACCGCAGCAAGAAGCTTTTCAGGCA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGGATCACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCGGTCTTCAGGGCAACTaGGTTCCTCGCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GITSDDGCVIQRGEAVTVGLQGN*VPRSGS
Trigger: GCTGCCCGAGCGAGGAACCAAGTTGCCCTGAAGACC...GACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp CAGGCCAACAGCAGAGGTGGAGGAGGAAGACTCTCCCCTGGAGCCCCCGGAGGGGTCTGGTGTGGTCAGTaGAATGGTGACTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: QANSRGGGGRLSPGAPGGVWCGQ*NGDSTH
Trigger: GTGGGTTGAGTCACCATTCAACTGACCACACCAGAC...CCCTCCGGGGGCTCCAGGGGAGAGTCTTCCTCCTCCACCTCTGCTGTTGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACGTCCTCGCTGGATGTaGGGCTGCGCGGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTRPRWM*GCAAWL
Trigger: CAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS GCA 90 bp TTCTGGCACCTCGGACGGCGAGCTGTCTGGCTTCATCTCCACCTCTaGCTTCTCGTCCTCTTCCTGCAGGGCGTTGTCCAGCTTAGTGGC +
Preference number: 5 (lower is better)
Translates to: FWHLGRRAVWLHLHL*LLVLFLQGVVQLSG
Trigger: GCCACTAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAGCCAGACAGCTCGCCGTCCGAGGTGCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CCACCCTCGGTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCTCGGGTTTATCCTTCTTCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PPSVPQPCSQQRGRA*RPGLSPRVYPSSSG
Trigger: TCCGGAAGAAGAAGGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409530.5
ENST00000412252.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CTCATCCAAGTCCACGGATGCCAGAGGGGGAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTCCATGGAGCCCACCGCGACGATGGT +
Preference number: 5 (lower is better)
Translates to: LIQVHGCQRGRRDAE*QNHRLFHGAHRDDG
Trigger: ACCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCTCCCCCTCTGGCATCCGTGGACTTGGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp TGGCACCGCCCGGCTTCTCCGCAGTGGCCCGGATCGTGTCATAGATaGTCTCTTCTTTGGAGCTGTCTGACTCCGACCCCACGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: WHRPASPQWPGSCHR*SLLWSCLTPTPRSS
Trigger: ACTACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACTGCGGAGAAGCCGGGCGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp CTTGAAGAGGGCACGGAGACAGGGACAGAGTGGGGTCCTGTCACCTaGGTAGAACGTGCCAGGCAACATCTCCAGCGCCTCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LEEGTETGTEWGPVT*VERARQHLQRLSFS
Trigger: GCTGAAGCTGAGGCGCTGGAGATGTTGCCTGGCACGTTCTACCCAGGTGACAGGACCCCACTCTGTCCCTGTCTCCGTGCCCTCTTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTTGGTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: VPDSSYPKIDEVLLLQVWWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...CCAAACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRALLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPLPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTCTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSLPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGESGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRISLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGATCTCGCCGTCCACTaGGGGTTGGTATGGCTTGAC +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHDLAVH*GLVWLD
Trigger: GTCAAGCCATACCAACCCCAAGTGGACGGCGAGATC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS TCA 90 bp ACTGTAGAGCTTCCGCTTGGGCCCCGGGTACTCGAAGGCCGAGAGTaGGTCCTTGTTGGCACCAAGAGCAAAAGGCGACCCGACATGCCA +
Preference number: 5 (lower is better)
Translates to: TVELPLGPRVLEGRE*VLVGTKSKRRPDMP
Trigger: TGGCATGTCGGGTCGCCTTTTGCTCTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGAAGCTCTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS TCA 90 bp CTCCTATGTGGTGGGTTACCCTGGGTGGAGGGGCTCTGGAGAGCATaGGGAGTGCACTGGTGTGACATCGTGACCGTGAATGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLCGGLPWVEGLWRA*GVHWCDIVTVNGGG
Trigger: CCCACCACCATTCACGGTCACGATGTCACACCAGTGCACTCCTCATGCTCTCCAGAGCCCCTCCACCCAGGGTAACCCACCACATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 90 bp ACCCTTCTAGCTCCAACCTTTACTGGCCCCAGGGTGGTGGCCAGATaGCTCCCACAGGCAGGAGGTCCCATCTCAGTGCCAGAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TLLAPTFTGPRVVAR*LPQAGGPISVPEKS
Trigger: GGACTTCTCTGGCACTGAGATGGGACCTCCTGCCTGTGGGAGTCATCTGGCCACCACCCTGGGGCCAGTAAAGGTTGGAGCTAGAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 90 bp CCCCTTTCATGTGAGAGGCTCACTGGTAGGACACACGGGCCTTACTaGAAAGCAGAACGCGTGAGGAGCCCTGTCTTCCCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PLSCERLTGRTHGPY*KAERVRSPVFPRVA
Trigger: GGCCACCCTGGGGAAGACAGGGCTCCTCACGCGTTCTGCTTTTCAGTAAGGCCCGTGTGTCCTACCAGTGAGCCTCTCACATGAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 90 bp AGAGAAAACCATCACAAGGCAGGTCACCGAGTCAGGGCAGCTGGCTaGAGATCACCCAGGAAGGCGAGGGAGACGCCCAAACCATGCCAG +
Preference number: 5 (lower is better)
Translates to: RENHHKAGHRVRAAG*RSPRKARETPKPCQ
Trigger: CTGGCATGGTTTGGGCGTCTCCCTCGCCTTCCTGGGTGATCTGCAGCCAGCTGCCCTGACTCGGTGACCTGCCTTGTGATGGTTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp CCACCCTCGGTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCTCGGGTTTATCTTTATCCACGAGCT +
Preference number: 5 (lower is better)
Translates to: PPSVPQPCSQQRGRA*RPGLSPRVYLYPRA
Trigger: AGCTCGTGGATAAAGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS CCA 90 bp CATGAAGTGGGCTCCTCTCCCTCCTATGTGGTGGGTTACCCTGGGTaGAGGGGCTCTGGAGAGCATGAGGAGTGCACTGGTGTGACATCG +
Preference number: 5 (lower is better)
Translates to: HEVGSSPSYVVGYPG*RGSGEHEECTGVTS
Trigger: CGATGTCACACCAGTGCACTCCTCATGCTCTCCAGAGCCCCTCCACCCAGGGTAACCCACCACATAGGAGGGAGAGGAGCCCACTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWLLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRASGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCSGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGATCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRSGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLCLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGELGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYTTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: DWLLQYRGGWRPTASRWVGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...AACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp ACGGTGGATGACAGAGTTCCCACCTCTGCCTCCATGCAGGGTGGGGCTTCCAAGGCGCTGGCATTGAGGTaGTTGTCACTGTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: TVDDRVPTSASMQGGASKALALR*LSLLER
Trigger: GCGCTCCAACAGTGACAACAACCTCAATGCCAGCGC...CTTGGAAGCCCCACCCTGCATGGAGGCAGAGGTGGGAACTCTGTCATCCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCGCGCTGGCATTGAGGTaGTTGTCACTGTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGALALR*LSLLER
Trigger: GCGCTCCAACAGTGACAACAACCTCAATGCCAGCGC...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTCGGGAGCGCTGGCATaGAGGTTGTTGTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHSGALA*RLLSLL
Trigger: CAACAGTGACAACAACCTCAATGCCAGCGCTCCCGA...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCGCGCCGCCCAGCCTGTaGAGCGATGGGGACCGGCTG +
Preference number: 5 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIAPPSL*SDGDRL
Trigger: CAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGC...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGCCGTCCACTTGGGGTaGGTATGGCTTGACAGCGAC +
Preference number: 5 (lower is better)
Translates to: LAAACARHEPCVFLSFMSAVHLG*VWLDSD
Trigger: GTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp ACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTTTATACGTCCTCGCTGGATGTaGGGCTGCGCGGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: TSDDGCVIQRGEAVTVFIRPRWM*GCAAWL
Trigger: CAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACG...TATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS TCA 90 bp CTCCGGGCTTCTTGGAGCGAGGCTGGCGGACTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGGCTTTGCCAATTTCTCTCGGTTCAT +
Preference number: 5 (lower is better)
Translates to: LRASWSEAGGLGSHW*IQSFPRLCQFLSVH
Trigger: ATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAAGCCCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS TCA 90 bp GGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTCTGAAACAGCAACACAG +
Preference number: 5 (lower is better)
Translates to: GAGANSEGDRRAPCT*DGAHDLRASETATQ
Trigger: CTGTGTTGCTGTTTCAGAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp GGCTGGGACCACAGTCCCCAGTCCCCAGGCTCATTCGCAGAAGCATaGCTCCCACTGTCTGAACCGCAACATGGTTGCCAAGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: GWDHSPQSPGSFAEA*LPLSEPQHGCQDFP
Trigger: TGGAAAGTCTTGGCAACCATGTTGCGGTTCAGACAGTGGGAGCCATGCTTCTGCGAATGAGCCTGGGGACTGGGGACTGTGGTCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 90 bp TCCACATCTTCCCACATGAAGTGGGCTCCTCTCCCTCCTATGTGGTaGGTTACCCTGGGTGGAGGGGCTCTGGAGAGCATGAGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: STSSHMKWAPLPPMW*VTLGGGALESMRSA
Trigger: TGCACTCCTCATGCTCTCCAGAGCCCCTCCACCCAGGGTAACCCACCACATAGGAGGGAGAGGAGCCCACTTCATGTGGGAAGATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp GTCTCCACATCTTCCCACATGAAGTGGGCTCCTCTCCCTCCTATGTaGTGGGTTACCCTGGGTGGAGGGGCTCTGGAGAGCATGAGGAGT +
Preference number: 5 (lower is better)
Translates to: VSTSSHMKWAPLPPM*WVTLGGGALESMRS
Trigger: ACTCCTCATGCTCTCCAGAGCCCCTCCACCCAGGGTAACCCACCACATAGGAGGGAGAGGAGCCCACTTCATGTGGGAAGATGTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp ACACAGAGAAAACCATCACAAGGCAGGTCACCGAGTCAGGGCAGCTaGCTGCAGATCACCCAGGAAGGCGAGGGAGACGCCCAAACCATG +
Preference number: 5 (lower is better)
Translates to: TQRKPSQGRSPSQGS*LQITQEGEGDAQTM
Trigger: CATGGTTTGGGCGTCTCCCTCGCCTTCCTGGGTGATCTGCAGCCAGCTGCCCTGACTCGGTGACCTGCCTTGTGATGGTTTTCTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACATCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTLLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISLPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHRLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPTSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCAAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: GCCARPAPRGDAVSLAAAKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...TGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCTTCCGGACCGAGGCTaGCAAACCGAGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCLPDRG*QTELLQ
Trigger: CTGGAGGAGCTCGGTTTGCAAGCCTCGGTCCGGAAG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449833.6
CDS-3UTR CAA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCACGGGGCTGCAGACGTaGGCTGCCTACTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPTGLQT*AAYSPR
Trigger: CCTGGGTGAGTAGGCAGCCAACGTCTGCAGCCCCGT...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS TCA 90 bp CTCCACGGCCACTTACTGCCTAGTGACTGCCTACAGTTATCCACCTaGGACTCACAAGCACGCTGCGCTTTTGCACAGCAGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LHGHLLPSDCLQLST*DSQARCAFAQQPRG
Trigger: GCCTCTGGGCTGCTGTGCAAAAGCGCAGCGTGCTTGTGAGTCTCAGGTGGATAACTGTAGGCAGTCACTAGGCAGTAAGTGGCCGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 90 bp AGTGGCCCGGATCGTGTCATAGATGGTCTCTTCTTTGGAGCTGTCTaGCTCCGACCCCACGGAGTAGTCGGAGAAGCTCTGGGCCATCTC +
Preference number: 5 (lower is better)
Translates to: SGPDRVIDGLFFGAV*LRPHGVVGEALGHL
Trigger: GAGATGGCCCAGAGCTTCTCCGACTACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp TTGCTGGCGATCTTCCCCACCTCTGAGTATGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAGTTGGCTTGCGGGCCGGCATTCCGA +
Preference number: 5 (lower is better)
Translates to: LLAIFPTSEYGFSGI*PLLLRKLACGPAFR
Trigger: TCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAGAGGTGGGGAAGATCGCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GTGGCGTCCACGGTGTGCACCATCAGCAGGCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCGATCAGCATGTTCTTCTTGTCATCG +
Preference number: 5 (lower is better)
Translates to: VASTVCTISRPADFC*DVSMMSISMFFLSS
Trigger: CGATGACAAGAAGAACATGCTGATCGACATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACACCGTGGACGCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GCTTCTCCGCAGTGGCCCGGATCGTGTCATAGATGGTCTCTTCTTTaGAGCTGTCTGACTCCGACCCCACGGAGTAGTCGGAGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: ASPQWPGSCHRWSLL*SCLTPTPRSSRRSS
Trigger: AGAGCTTCTCCGACTACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACTGCGGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp GCTGCGCTCACCTTCCTGAGGCAGCACTGTCCAGCGCCCACCCAGTaGACAGTTTTGTTGCAGAAGGAGCTGGGGTACCCTGTGTTATTT +
Preference number: 5 (lower is better)
Translates to: AALTFLRQHCPAPTQ*TVLLQKELGYPVLF
Trigger: AAATAACACAGGGTACCCCAGCTCCTTCTGCAACAAAACTGTCCACTGGGTGGGCGCTGGACAGTGCTGCCTCAGGAAGGTGAGCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCATGGGTGTGTCAGCTTaGGCCCCTCGAAGCACGAAT +
Preference number: 5 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSMGVSA*APRSTN
Trigger: ATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCAT...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGACTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRLLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQSGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSLLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWLLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESASSCRA*SSLVAS
Trigger: GGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGRQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGAGGTACTGGGGGTTaGTCAACCATAAATGCTTGC +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGGTGG*STINAC
Trigger: GCAAGCATTTATGGTTGACAAACCCCCAGTACCTCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIFHERV*IKCIAF
Trigger: AAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAA...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFTTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: LAAACARHEPCVFLSFMSVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCTTTCATAGTCGGGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RPQGLGHVLFLRSCFHSRGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...CCGACTATGAAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGGCTGGGAGGTGCCGGGGCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: MGWEVPGRTVKVTVVLRVLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...TACACGGAGCACGACGGTCACCTTCACTGTTCGCCCCGGCACCTCCCAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp TCATCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: SSLLARPQGLGHVLFLRSTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...GGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: RLAVAVSRGMATYCVPLGQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...ACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGSLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRSLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCACTGGCATTGAGGTTGTaGTCACTGTTGGAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLALRL*SLLERS
Trigger: GCTGCGCTCCAACAGTGACAACAACCTCAATGCCAG...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTCTGCCAGCTCAAAGTaGCCTGCTATTATGGCCACC +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGSASSK*PAIMAT
Trigger: GGTGGCCATAATAGCAGGCAACTTTGAGCTGGCAGA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTGGGGTTGGTATGGCTaGACAGCGACGAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPWGWYG*TATKSL
Trigger: GAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCA...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp CTCGGGCAGCTTTGTGTAGGGCGGTCATCCCATCTTTGGCACGGAAGTCCAGGTCCTCGGTCCAGCATCTaGGTGATCTTCTCCACCAAG +
Preference number: 5 (lower is better)
Translates to: LGQLCVGRSSHLWHGSPGPRSSI*VIFSTK
Trigger: CTTGGTGGAGAAGATCACCAAGATGCTGGACCGAGG...ACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTCCGGGTCGTGGAAATaGGGATCCAGGCCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSSGSWK*GSRPRS
Trigger: GGACCGAGGCCTGGATCCCAATTTCCACGACCCGGA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS TCA 90 bp GCCCAGGGGCAACTTCTGTGGGGGAGTGCCACACTTCTTACCTATTaGTTTCTGCCTTCGCATCGTACCTCGAGGGATGCCCAGAAACGG +
Preference number: 5 (lower is better)
Translates to: AQGQLLWGSATLLTY*FLPSHRTSRDAQKR
Trigger: CCGTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGAAATCAATAGGTAAGAAGTGTGGCACTCCCCCACAGAAGTTGCCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409530.5
ENST00000449116.6
CDS TCA 90 bp GGAGAGGTGTGGGTCTCTTGCCTTTTGGGCCCATTCACGTGGATATaGACGGCCCACCCACCGCTTCTGAAAAGATCCATCCTACCACGG +
Preference number: 5 (lower is better)
Translates to: GEVWVSCLLGPFTWI*TAHPPLLKRSILPR
Trigger: CCGTGGTAGGATGGATCTTTTCAGAAGCGGTGGGTGGGCCGTTCATATCCACGTGAATGGGCCCAAAAGGCAAGAGACCCACACCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 90 bp TCCCCACCTCTGAGTATGGGTTTTCTGGCATCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGCCGGCATTCCGACTGTAGAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SPPLSMGFLASGLSC*GSWLAGRHSDCRGL
Trigger: AAGACCTCTACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAGAGGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp TCAAACCTGCTGTGCTTAGAAGATCTGGCTACCTGGTGGCTCGCCTaGCCCCTTCCTTCACAGCCATTCCACCTGGAAGTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SNLLCLEDLATWWLA*PLPSQPFHLEVSKL
Trigger: CAGCTTCGACACTTCCAGGTGGAATGGCTGTGAAGGAAGGGGGCAGGCGAGCCACCAGGTAGCCAGATCTTCTAAGCACAGCAGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS CCA 90 bp CACTCGGACCACTGCTCCTCGGGGTCTCCACGGAGACTGAGTCCGTaGGGCGGCCTCATCTACTACTGCCTGTTAATTCAACAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: HSDHCSSGSPRRLSP*GGLIYYCLLIQQEK
Trigger: TTTTTCCTGTTGAATTAACAGGCAGTAGTAGATGAGGCCGCCCCACGGACTCAGTCTCCGTGGAGACCCCGAGGAGCAGTGGTCCGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCATGGGTGTGTCAGCTTaGGCCCCTCGAAGCACGAAT +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPMGVSA*APRSTN
Trigger: ATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCAT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTCTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSLLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTCCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDSSCRA*SSLVAS
Trigger: GGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGAGGTACTGGGGGTTaGTCAACCATAAATGCTTGC +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGGTGG*STINAC
Trigger: GCAAGCATTTATGGTTGACAAACCCCCAGTACCTCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: LRLAVAVSRGMATYCVPLPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...CAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGTTTGGGAGAAACTATaGGATGGTGAAGCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRVWEKL*DGEAGE
Trigger: CTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAAC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACAGGTTGTTGTCACTGTaGGAGCGCAGCAGGACCCGG +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNRLLSL*ERSRTR
Trigger: CCGGGTCCTGCTGCGCTCCAACAGTGACAACAACCT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGCCTGAAAAGCTTCTaGCTGCGGTCAGCGCGGGTT +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCCLKSF*LRSARV
Trigger: AACCCGCGCTGACCGCAGCAAGAAGCTTTTCAGGCA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGATCTCGCCGTCCACTaGGGGTTGGTATGGCTTGAC +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCDLAVH*GLVWLD
Trigger: GTCAAGCCATACCAACCCCAAGTGGACGGCGAGATC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS TCA 90 bp TGTGCACCATCAGCAGGCCAGCCGACTTCTGCTGGGACGTGTCCATaGTGTCGATCAGCATGTTCTTCTTGTCATCGCCTTTCCGGTCTC +
Preference number: 5 (lower is better)
Translates to: CAPSAGQPTSAGTCP*CRSACSSCHRLSGL
Trigger: GAGACCGGAAAGGCGATGACAAGAAGAACATGCTGATCGACATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 90 bp GGGCTGGAGGATGTGGGTGTACTTGTGGGTATTCACCTTAGAGGCTaGGTGACTTCCGGTGATCCACAGCCTCAATCAAGAAGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: GLEDVGVLVGIHLRG*VTSGDPQPQSRSPR
Trigger: CCGGGGACTTCTTGATTGAGGCTGTGGATCACCGGAAGTCACTCAGCCTCTAAGGTGAATACCCACAAGTACACCCACATCCTCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS TCA 90 bp TCCCCAGTCCCCAGGCTCATTCGCAGAAGCATGGCTCCCACTGTCTaGACCGCAACATGGTTGCCAAGACTTTCCACTCTGAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SPVPRLIRRSMAPTV*TATWLPRLSTLSPS
Trigger: AGAAGGACTCAGAGTGGAAAGTCTTGGCAACCATGTTGCGGTTCAGACAGTGGGAGCCATGCTTCTGCGAATGAGCCTGGGGACTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS GCA 90 bp TTAGTGGCGTCCACGGTGTGCACCATCAGCAGGCCAGCCGACTTCTaGTGGGACGTGTCCATGATGTCGATCAGCATGTTCTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LVASTVCTISRPADF*WDVSMMSISMFFLS
Trigger: TGACAAGAAGAACATGCTGATCGACATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACACCGTGGACGCCACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp CTGAGTATGGGTTTTCTGGCATCTGGCCTCTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCCGACTGTAGAGGTCTTCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LSMGFLASGLSCCGS*LAGRHSDCRGLQSP
Trigger: TGGACTCTGAAGACCTCTACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GCAGACAGTTTGAAAGACTGGCTGGCTTCTTGCTGTCTGCAGAGTTaGTTGGTTGGCTGGAGTTCAACGAAGGGGACTGAGGGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: ADSLKDWLASCCLQS*LVGWSSTKGTEGCR
Trigger: GCGACACCCCTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 90 bp GCTCTCTCTTCAAGACCTGGACTTGAGAGATGTCTGCTGGAGCCCTaGCTCTGTCAGATGCCAGCTTGGGTGCACTTTTCTCCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: ALSSRPGLERCLLEP*LCQMPAWVHFSPVS
Trigger: GGAGACAGGAGAAAAGTGCACCCAAGCTGGCATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAGTCCAGGTCTTGAAGAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp CTACCACGGCTCTCTCTTCAAGACCTGGACTTGAGAGATGTCTGCTaGAGCCCTGGCTCTGTCAGATGCCAGCTTGGGTGCACTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LPRLSLQDLDLRDVC*SPGSVRCQLGCTFL
Trigger: GAGAAAAGTGCACCCAAGCTGGCATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAGTCCAGGTCTTGAAGAGAGAGCCGTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTATGGGTGTGTCAGCTTaGGCCCCTCGAAGCACGAAT +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSMGVSA*APRSTN
Trigger: ATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCAT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISLLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATCTCTACTTATAACAAGAGCAGTCTGCGAGGTGGAGAGCAGCCGTCCTTATCTTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: ISTYNKSSLRGGEQPSLSSGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...AGATAAGGACGGCTGCTCTCCACCTCGCAGACTGCTCTTGTTATAAGTAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: DWLLQYRGGWRPTASRWVISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...AACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGELLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESATTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCGAGGGGGATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: SRGMATYCVPLGSSQIDPWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...GGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCATCCCCCTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLSLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGESLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACTGGCAGCCGCATGTGCCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: LCPPSSQRRRCLTGSRMCPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...GCACATGCGGCTGCCAGTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTCTTTACGTTGTGCATaGATATGGGCTTCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLSLRCA*IWASQF
Trigger: GAACTGAGAAGCCCATATCAATGCACAACGTAAAGA...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCTGCCTGAAAAGCTTCTaGCTGCGGTCAGCGCGGGTT +
Preference number: 5 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPCLKSF*LRSARV
Trigger: AACCCGCGCTGACCGCAGCAAGAAGCTTTTCAGGCA...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCTCGCTCGGGCAGCTTaGTGTAGGGCGGTCATCCCA +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDLARAA*CRAVIP
Trigger: TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp TCGGTCCAGCATCTTGGTGATCTTCTCCACCAAGCGATGCTGAATGTGATCCATCTCGCTCGGGCAGCTTaGTGTAGGGCGGTCATCCCA +
Preference number: 5 (lower is better)
Translates to: SVQHLGDLLHQAMLNVIHLARAA*CRAVIP
Trigger: TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAG...ATGGATCACATTCAGCATCGCTTGGTGGAGAAGATCACCAAGATGCTGGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp TTCAGGGCAACTTGGTTCCTCGCTCGGGCAGCTTTGTGTAGGGCGGTCATCCCAGAAACAGAAGCACTCTaGCACAGCTGTCCTGGTTGT +
Preference number: 5 (lower is better)
Translates to: FRATWFLARAALCRAVIPETEAL*HSCPGC
Trigger: ACAACCAGGACAGCTGTGCAAGAGTGCTTCTGTTTC...TGGGATGACCGCCCTACACAAAGCTGCCCGAGCGAGGAACCAAGTTGCCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp CGCTTTACCCCAGTTTCACCCATGAGGACTGAAATGGCAGAAGAGCTGTTGCCCGATCTCGCCGTCCACTaGGGGTTGGTATGGCTTGAC +
Preference number: 5 (lower is better)
Translates to: RFTPVSPMRTEMAEELLPDLAVH*GLVWLD
Trigger: GTCAAGCCATACCAACCCCAAGTGGACGGCGAGATC...GGGCAACAGCTCTTCTGCCATTTCAGTCCTCATGGGTGAAACTGGGGTAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTAAAAGCAGAGGGAGGTaGACACCCAGAGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCKSRGR*TPRGSA
Trigger: TGCACTGCCTCTGGGTGTCAACCTCCCTCTGCTTTT...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp TCGTGGAAATTGGGATCCAGGCCTCGGTCCAGCATCTTGGTGATCTTCTCCACCACAGGATCCGCTGCTTaGCAACCCACACTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SWKLGSRPRSSILVIFSTTGSAA*QPTLWH
Trigger: ATGCCACAGTGTGGGTTGCAAAGCAGCGGATCCTGT...GGTGGAGAAGATCACCAAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCTCATCGAGACTGGCTaGTTTATACACCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRLIETG*FIHPLL
Trigger: AAGAAGCGGGTGTATAAACAAGCCAGTCTCGATGAG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS GCA 90 bp ATCCTACCACGGCTCTCTCTTCAAGACCTGGACTTGAGAGATGTCTaGTGGAGCCCTGGCTCTGTCAGATGCCAGCTTGGGTGCACTTTT +
Preference number: 5 (lower is better)
Translates to: ILPRLSLQDLDLRDV*WSPGSVRCQLGCTF
Trigger: AAAAGTGCACCCAAGCTGGCATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAGTCCAGGTCTTGAAGAGAGAGCCGTGGTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 90 bp CATGGCTGCCTGTGTCAGAGGTGTTGGGAGACTGAGCCTCACAGATaGCCTCTTAGAGCAGGAACTGTCTGTATTCTAGAGGGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: HGCLCQRCWETEPHR*PLRAGTVCILEGQS
Trigger: GCTTTGGCCCTCTAGAATACAGACAGTTCCTGCTCTAAGAGGCCATCTGTGAGGCTCAGTCTCCCAACACCTCTGACACAGGCAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 90 bp CTTGAGAGATGTCTGCTGGAGCCCTGGCTCTGTCAGATGCCAGCTTaGGTGCACTTTTCTCCTGTCTCCACATCTTCCCACATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LERCLLEPWLCQMPA*VHFSPVSTSSHMKW
Trigger: CCACTTCATGTGGGAAGATGTGGAGACAGGAGAAAAGTGCACCCAAGCTGGCATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGCLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTACCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRRFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAELPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGTTGTTGAGGTCGGCCTaGGGGGCCTCCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRLLRSA*GASPLG
Trigger: ACCCAAAGGGGAGGCCCCCAAGGCCGACCTCAACAA...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CACAGAACTGAGGATGCTGTGCCCGCCCAGCTCCCAGAGGAGACGCTGTCTCACGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HRTEDAVPAQLPEETLSHGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...GTGAGACAGCGTCTCCTCTGGGAGCTGGGCGGGCACAGCATCCTCAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCCLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCATGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPCLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSCLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESALLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRALLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSRLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVRLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLRLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPRQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRARQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCTGTTGGCGAGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: SLLARPQGLGHVLFLRSCVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...GCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp GCAGACAACTGCTCTTGTCCTGGAGACCTGGAGCTTGGGCAGTTGCACGCTGGCTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ADNCSCPGDLELGQLHAGFHERV*IKCIAF
Trigger: AAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAA...GCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWTSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGCGACCTACTGCGTCCCGCTGGGTTCAAGCCAAATAGATCCCCAGAAGGGGCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: MATYCVPLGSSQIDPQKGLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...CCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGCAGTAGGTCGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACACCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCTTGGCTGGGCACAGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LREQKDCLSRDAHPWLGTEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...TGTGCCCAGCCAAGGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGGGCTCAAGAAAGCCTaGCCAGAGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDGLKKA*PERLTW
Trigger: CCAGGTCAGCCTCTCTGGCAAGGCTTTCTTGAGCCC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTCGGACCCGGCAAAGCGAGGCCACCTGCATGCTGGGCGGCAGGCTGAGAATCCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: SRTRQSEATCMLGGRLRIRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...GATTCTCAGCCTGCCGCCCAGCATGCAGGTGGCCTCGCTTTGCCGGGTCCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCGCCTTAGCATGTGGTTaGCTTGTCAACCAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCALACG*LVNQRG
Trigger: GCCTCTCTGGTTGACAAGCAAACCACATGCTAAGGC...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGCCTTAGCATGTGGTTaGCTTGTCAACCAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLALACG*LVNQRG
Trigger: GCCTCTCTGGTTGACAAGCAAACCACATGCTAAGGC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGCCTTAGCATGTGGTTaGCTTGTCAACCAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSALACG*LVNQRG
Trigger: GCCTCTCTGGTTGACAAGCAAACCACATGCTAAGGC...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCAGGTTGTTGTCACTGTaGGAGCGCAGCAGGACCCGG +
Preference number: 5 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIRLLSL*ERSRTR
Trigger: CCGGGTCCTGCTGCGCTCCAACAGTGACAACAACCT...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp TGGCTTTTCCTGGCGTTCTTTCCGGTGAGGCCCGAATCCTTCTGGAATGACTCATCGGGAGCGCTGGCATaGAGGTTGTTGTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: WLFLAFFPVRPESFWNDSSGALA*RLLSLL
Trigger: CAACAGTGACAACAACCTCAATGCCAGCGCTCCCGA...TGAGTCATTCCAGAAGGATTCGGGCCTCACCGGAAAGAACGCCAGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp AGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGACGATCCATTTTTGAGAGCTTaGATGACCTCCACAGAGTCG +
Preference number: 5 (lower is better)
Translates to: SGVFVQEKLAAVGITSDDPFLRA*MTSTES
Trigger: CGACTCTGTGGAGGTCATCAAAGCTCTCAAAAATGG...ATCGTCGGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCAGCCGTTCTCATCTTaGCAGCACACAGTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSQPFSS*QHTVAC
Trigger: ACACGCCACTGTGTGCTGCAAAGATGAGAACGGCTG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp ACCTCCGACGATGGCTGTGTGATACAGCGGGGTGAGGCCGTAACTGTCTTTATACAGCCGTTCTCATCTTaGCAGCACACAGTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: TSDDGCVIQRGEAVTVFIQPFSS*QHTVAC
Trigger: ACACGCCACTGTGTGCTGCAAAGATGAGAACGGCTG...TATAAAGACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCACAGGATCCGCTGCTTaGCAACCCACACTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSTGSAA*QPTLWH
Trigger: ATGCCACAGTGTGGGTTGCAAAGCAGCGGATCCTGT...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTTGAGACAACACTaGGAGCGAGGCTGGCGGACT +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFDLRQH*ERGWRT
Trigger: AGTCCGCCAGCCTCGCTCCAAGTGTTGTCTCAAGTC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS TCA 90 bp TTTTGGGCCCATTCACGTGGATATGAACGGCCCACCCACCGCTTCTaGAAAGATCCATCCTACCACGGCTCTCTCTTCAAGACCTGGACT +
Preference number: 5 (lower is better)
Translates to: FWAHSRGYERPTHRF*KDPSYHGSLFKTWT
Trigger: AGTCCAGGTCTTGAAGAGAGAGCCGTGGTAGGATGGATCTTTTCAGAAGCGGTGGGTGGGCCGTTCATATCCACGTGAATGGGCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 90 bp GAACTGCCACTCTGGGCCCTAGTGCATGTTTTGCTGTCCCCACACTaGAAGCCCATTCATCCTATTGTCCCTAGGAAAGCCACAGCCACT +
Preference number: 5 (lower is better)
Translates to: ELPLWALVHVLLSPH*KPIHPIVPRKATAT
Trigger: AGTGGCTGTGGCTTTCCTAGGGACAATAGGATGAATGGGCTTTCAGTGTGGGGACAGCAAAACATGCACTAGGGCCCAGAGTGGCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 90 bp GGCAACTTCTGTGGGGGAGTGCCACACTTCTTACCTATTGATTTCTaGCTTCGCATCGTACCTCGAGGGATGCCCAGAAACGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GNFCGGVPHFLPIDF*LRIVPRGMPRNGAF
Trigger: AAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGAAATCAATAGGTAAGAAGTGTGGCACTCCCCCACAGAAGTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409530.5
ENST00000449116.6
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCC +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLAAREG*EAGTIS
Trigger: GGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFRFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGTCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLSSCRA*SSLVAS
Trigger: GGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGA...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCTCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSSSCRA*SSLVAS
Trigger: GGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGA...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWCLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSLLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWRLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSRQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTGGAGGTACTGGGGGTTaGTCAACCATAAATGCTTGC +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRAGGTGG*STINAC
Trigger: GCAAGCATTTATGGTTGACAAACCCCCAGTACCTCC...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGGAGGTACTGGGGGTTaGTCAACCATAAATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAGGTGG*STINAC
Trigger: GCAAGCATTTATGGTTGACAAACCCCCAGTACCTCC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFTTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGGCCACATCTGGTTGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: PLYVHPSLDFPANRPHLVARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...AACCAGATGTGGCCGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: LAAACARHEPCVFLSFMSKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCTTGGGCAGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: SLGSCTLAGSLGQVSPPLRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...CAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACTGCCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGTGTTCACTGTTTGTTaGCAATCAGAACCACAACCT +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRVFTVC*QSEPQP
Trigger: AGGTTGTGGTTCTGATTGCAAACAAACAGTGAACAC...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGAGTTCTGCCACTCCCTaGGCCTTATGGCTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWSSATP*ALWLED
Trigger: GTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACT...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGGAATGTTCACCTACTaGCATGGGTTCATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEGMFTY*HGFMVV
Trigger: GACAACCATGAACCCATGCAAGTAGGTGAACATTCC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCTGGGGTTGGTATGGCTaGACAGCGACGAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIWGWYG*TATKSL
Trigger: GAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCA...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCATTTTCCCTCTGACTTaGGCAGCGGTCCGCTCATTA +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLIFPLT*AAVRSL
Trigger: TAATGAGCGGACCGCTGCCAAAGTCAGAGGGAAAAT...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATTATACACCCGCTTCTaGTATCGAAACTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LAAACARHEPCVFLSFMSLYTRF*YRNSRE
Trigger: TTCCCTGGAGTTTCGATACAAGAAGCGGGTGTATAA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGGTCTTCGTGTGGAGCTaGGCCAACTGTTTCTCATCG +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWVFVWS*ANCFSS
Trigger: CGATGAGAAACAGTTGGCCAAGCTCCACACGAAGAC...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp AGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCAGTAGGGATCACCTCCGACGATATGCATTTCTTCAGATaGGTCTTCGTGTGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SGVFVQEKLAAVGITSDDMHFFR*VFVWSL
Trigger: CAAGCTCCACACGAAGACCAATCTGAAGAAATGCAT...ATCGTCGGAGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSEHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAGCCAAATAGATCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGAGTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: KPNRSPEGGWLGRLKTSECLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...CTCAGATGTCTTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACGGAGGTACTGGGGGTTaGTCAACCATAAATGCTTGC +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDGGTGG*STINAC
Trigger: GCAAGCATTTATGGTTGACAAACCCCCAGTACCTCC...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLGWRT*AIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWTTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ALSMFILCPTRVTPRSMRLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...CCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp AGACCACAGGGCTTGGGGCACGTCTTGTTCCTGAGGTCCTGCTTTCATAGTCGGAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: RPQGLGHVLFLRSCFHSRKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...CCGACTATGAAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TATTTGAGATTGGCTGTTGCAGTATCGAGGGGGATGGCGACCTACTGCGTCCCGCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: YLRLAVAVSRGMATYCVPLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...CGGGACGCAGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLREDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAELETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGGGGTGGTGAGAGCTGCCCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATTCACAGAAGCAGATTTaGACGTTTTGCATAATTCTG +
Preference number: 5 (lower is better)
Translates to: PGVVRAARKAEDGGLRRYSQKQI*TFCIIL
Trigger: CAGAATTATGCAAAACGTCAAAATCTGCTTCTGTGA...ATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGGGCAGCTCTCACCACCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGGACACAAATTCTCTCTaGCTCCAAGCCTTAGCATGT +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGEDTNSL*LQALAC
Trigger: ACATGCTAAGGCTTGGAGCAAGAGAGAATTTGTGTC...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGTTTGGGAGAAACTATaGGATGGTGAAGCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSVWEKL*DGEAGE
Trigger: CTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAAC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTGGCAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCATCTTTACGTTGTGCATaGATATGGGCTTCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: LAAACARHEPCVFLSFMSSLRCA*IWASQF
Trigger: GAACTGAGAAGCCCATATCAATGCACAACGTAAAGA...TGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GGTTTGCTTGTCAACCAGAGAGGCGGCCCAGTTCTGCCACTCCCTTGGCCTTATCGTCCTTTCTTTACGTaGTGCATTGATATGGGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLVNQRGGPVLPLPWPYRPFFT*CIDMGF
Trigger: GAAGCCCATATCAATGCACAACGTAAAGAAAGGACG...ATAAGGCCAAGGGAGTGGCAGAACTGGGCCGCCTCTCTGGTTGACAAGCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCCTGGCATTGAGGTTGTaGTCACTGTTGGAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSILALRL*SLLERS
Trigger: GCTGCGCTCCAACAGTGACAACAACCTCAATGCCAG...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATTCGGGAGCGCTGGCATaGAGGTTGTTGTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDSGALA*RLLSLL
Trigger: CAACAGTGACAACAACCTCAATGCCAGCGCTCCCGA...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCTGCCTGAAAAGCTTCTaGCTGCGGTCAGCGCGGGTT +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSCLKSF*LRSARV
Trigger: AACCCGCGCTGACCGCAGCAAGAAGCTTTTCAGGCA...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGAAACAGAAGCACTCTaGCACAGCTGTCCTGGTTGT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSETEAL*HSCPGC
Trigger: ACAACCAGGACAGCTGTGCAAGAGTGCTTCTGTTTC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp CGTTCTCATCTTTGCAGCACACAGTGGCGTGTTCGTGCAGGAGAAGCTCGCAGCTTATACACCCGCTTCTaGTATCGAAACTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RSHLCSTQWRVRAGEARSLYTRF*YRNSRE
Trigger: TTCCCTGGAGTTTCGATACAAGAAGCGGGTGTATAA...GCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAGATGAGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS GCA 90 bp GCTGGTGACACACAGGTGTGGTTTCTGCAGAAAAATCCAACCACGTaGCTGTGCCAGTCACATTGTCAAAGATGCAGGGCTCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: AGDTQVWFLQKNPTT*LCQSHCQRCRALST
Trigger: TGTGGAAAGAGCCCTGCATCTTTGACAATGTGACTGGCACAGGCACGTGGTTGGATTTTTCTGCAGAAACCACACCTGTGTGTCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRACLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCATGCAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: LALSTEVIPTVGPGKVPCRFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...GCATGGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESARFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAESSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSLLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAELLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATC +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQGLSST*DCFTSI
Trigger: GATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAACTGCCCTGGCTGCTCTaGCCGCTGCTGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSELPWLL*PLLLVD
Trigger: GTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAG...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLSGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAERSVSY*FSVSCR
Trigger: GCGGCAGGAGACGGAGAACAAGTACGAGACCGACCT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWLLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDERLAGF*LSAELV
Trigger: AACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCT...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp AGCCCTTTCTATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGAGGCAGGCAGACAGTTaGAAAGACTGGCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SPFYVHSVPDSSYPKIDERQADS*KDWLAS
Trigger: AGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCT...CTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVFHERV*IKCIAF
Trigger: AAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAA...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQTSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTSPHN*EVLGWR
Trigger: TCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTACCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCCTCCTTCTGCAGGTTaGGTAAGTGACTGCCATCGA +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDPPSAG*VSDCHR
Trigger: TCGATGGCAGTCACTTACCAAACCTGCAGAAGGAGG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCACAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGTTGCACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: SCTLAGSLGQVSPPLWNRRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...ACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCGACAGTGTTCACTGTTaGTTTGCAATCAGAACCACA +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPDSVHC*FAIRTT
Trigger: TGTGGTTCTGATTGCAAACAAACAGTGAACACTGTC...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGAGTTCTGCCACTCCCTaGGCCTTATGGCTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLSSATP*ALWLED
Trigger: GTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGAGGTTGTTGTCACTGTaGGAGCGCAGCAGGACCCGG +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRLLSL*ERSRTR
Trigger: CCGGGTCCTGCTGCGCTCCAACAGTGACAACAACCT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCTGGCATTGAGGTTGTaGTCACTGTTGGAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSLALRL*SLLERS
Trigger: GCTGCGCTCCAACAGTGACAACAACCTCAATGCCAG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGCCGTCCACTTGGGGTaGGTATGGCTTGACAGCGAC +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQAVHLG*VWLDSD
Trigger: GTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAATTTTCCCTCTGACTTaGGCAGCGGTCCGCTCATTA +
Preference number: 5 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAIFPLT*AAVRSL
Trigger: TAATGAGCGGACCGCTGCCAAAGTCAGAGGGAAAAT...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp AATCCTTCTGGAATGACTCAGGGTCAACTTGCACCTGTGCCAGGAACTTCCATCATGGCAGAAGAGCTGTaGCCCTATGGCTTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: NPSGMTQGQLAPVPGTSIMAEEL*PYGFSW
Trigger: CCAGGAAAAGCCATAGGGCAACAGCTCTTCTGCCAT...GATGGAAGTTCCTGGCACAGGTGCAAGTTGACCCTGAGTCATTCCAGAAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCGGATCACCAGCGTGTaGCCCTGGCTCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLRITSV*PWLSSV
Trigger: GACGGAGGAGAGCCAGGGCAACACGCTGGTGATCCG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCGACAAATGGAATGACTaGAGACAACACTTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLDKWND*RQHLER
Trigger: TCGCTCCAAGTGTTGTCTCAAGTCATTCCATTTGTC...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS GCA 90 bp CTTAGGAGGTACTGGGGGTTTGTCAACCATAAATGCTTGCCCATCTaGATAGACTGTGCAGGTGTCCACATTCTCTCCACCTTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LRRYWGFVNHKCLPI*IDCAGVHILSTFGR
Trigger: TCTTCCGAAGGTGGAGAGAATGTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTACCTCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp CAGAAAAATCCAACCACGTGCCTGTGCCAGTCACATTGTCAAAGATaGAGGGCTCTTTCCACACATCAGACGAACTCAAACCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QKNPTTCLCQSHCQR*RALSTHQTNSNLLC
Trigger: GCACAGCAGGTTTGAGTTCGTCTGATGTGTGGAAAGAGCCCTGCATCTTTGACAATGTGACTGGCACAGGCACGTGGTTGGATTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS GCA 90 bp GACACACAGGTGTGGTTTCTGCAGAAAAATCCAACCACGTGCCTGTaGCAGTCACATTGTCAAAGATGCAGGGCTCTTTCCACACATCAG +
Preference number: 5 (lower is better)
Translates to: DTQVWFLQKNPTTCL*QSHCQRCRALSTHQ
Trigger: CTGATGTGTGGAAAGAGCCCTGCATCTTTGACAATGTGACTGGCACAGGCACGTGGTTGGATTTTTCTGCAGAAACCACACCTGTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS-3UTR CAA 90 bp CCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGGCCACATCTGGTTATGGGTGTGTCAGCTTaGGCCCCTCGAAGCACGAAT +
Preference number: 5 (lower is better)
Translates to: PLYVHPSLDFPANRPHLVMGVSA*APRSTN
Trigger: ATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCAT...AACCAGATGTGGCCGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDCLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTTTTGGTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: WKPDCVFCGPCASGDLFWCLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...CCAAAAGAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTGCTGGGCCGCTGCTaGATGGTCGCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITELLGRC*MVATLG
Trigger: ACCGAGGGTGGCGACCATCAAGCAGCGGCCCAGCAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDRFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEGIWPL*LRKLAC
Trigger: GCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACCCTTTGGGTCCCTGTaGAGACTCCTTCATGGCTCG +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQPFGSL*RLLHGS
Trigger: CGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCAAATGGGGGAGAATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PNGGECAGSLTVCFAAHVGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...CACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACATTCTCCCCCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCAGGTTGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SVPDSSYPKIDEVLLLQVGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...AACCTGCAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLTTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGCTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRLCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: LSMKASLCSPKFRLSSQSAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...CGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GTGAGCCAGGGGTCTGAAGACCCAGCCATGTTGTGGACACAACTCAGTATTTCTCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: VSQGSEDPAMLWTQLSISLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...AGAAATACTGAGTTGTGTCCACAACATGGCTGGGTCTTCAGACCCCTGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGCTCCCTTGGCCAGGTCTCCCCTCCATTGTGGAATCGTGACTTTACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: TLAGSLGQVSPPLWNRDFTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...AAAGTCACGATTCCACAATGGAGGGGAGACCTGGCCAAGGGAGCCAGCCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVSLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAGTCTTGCAGCCAGCTaGCTTGTGGTTAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSLAAS*LVVSGM
Trigger: CATGCCACTAACCACAAGCAAGCTGGCTGCAAGACT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESAATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGAGTTCTGCCACTCCCTaGGCCTTATGGCTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRSSATP*ALWLED
Trigger: GTCTTCTAGCCATAAGGCCAAGGGAGTGGCAGAACT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGTGCATGGGTTCATGGTaGTCTACAAATACAGAAACA +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLCMGSW*STNTET
Trigger: TGTTTCTGTATTTGTAGACAACCATGAACCCATGCA...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCCGTCCTTTCTTTACGTaGTGCATTGATATGGGCTTC +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSRPFFT*CIDMGF
Trigger: GAAGCCCATATCAATGCACAACGTAAAGAAAGGACG...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAAGGGCACTTCCTTCTaGGTGAAGGCATTTAACAAA +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSKGTSF*VKAFNK
Trigger: TTTGTTAAATGCCTTCACCAAGAAGGAAGTGCCCTT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CAA 90 bp GGGACTGGGTTTCAAAGTTCAGAAGTAACTGGGGCCAGTGTCAAGCCGCCGTGTGACGACACTTGGAATTaGGGTCTTTGCAGGTATAAT +
Preference number: 5 (lower is better)
Translates to: GTGFQSSEVTGASVKPPCDDTWN*GLCRYN
Trigger: ATTATACCTGCAAAGACCCAAATTCCAAGTGTCGTC...ACACGGCGGCTTGACACTGGCCCCAGTTACTTCTGAACTTTGAAACCCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACCTCGGTCCAGCATCTaGGTGATCTTCTCCACCAAG +
Preference number: 5 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKPRSSI*VIFSTK
Trigger: CTTGGTGGAGAAGATCACCAAGATGCTGGACCGAGG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATTTGTGCTCAGGGCATaGAGGAAGAGGCACCGCGGA +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQFVLRA*RKRHRG
Trigger: TCCGCGGTGCCTCTTCCTCAATGCCCTGAGCACAAA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTATGGGTGTGTCAGCTTaGGCCCCTCGAAGCACGAAT +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSMGVSA*APRSTN
Trigger: ATTCGTGCTTCGAGGGGCCAAAGCTGACACACCCAT...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFCLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCGTAGACTCTTGGAGTaGGGGACTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRRLLE*GTWGSC
Trigger: ACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSGPWA*DVEFSG
Trigger: GCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCGGAGGTACTGGGGGTTaGTCAACCATAAATGCTTGC +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVGGTGG*STINAC
Trigger: GCAAGCATTTATGGTTGACAAACCCCCAGTACCTCC...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: PSISLSMKASLCSPKFRLGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAACCCATGGAGTGGGGTaGATGCTCACAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAETHGVG*MLTDFA
Trigger: AGCGAAGTCTGTGAGCATCAACCCCACTCCATGGGT...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: SGPHQLAAKVQQTEVTSFQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...GAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGATCCCGTGCAAAATaGACGGGGAGCCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGSRAK*TGSLSD
Trigger: GTCCGAGAGGCTCCCCGTCAATTTTGCACGGGATCC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGCTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITELELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTGGAGCTTGGGCAGTaGCACGCTGGCTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLELGQ*HAGWLP
Trigger: AGGGAGCCAGCCAGCGTGCAACTGCCCAAGCTCCAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCGGAAAGCAGAGGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: PESRGRRSQEVSRVHWCLRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...CAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCCTCTGCTTTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGERLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACACCCAGAGCGATAGGGGAAAAGCCTCTAAGTACCATCTTCCCTGGCCTCCGAAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: TPRAIGEKPLSTIFPGLRRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...TCGGAGGCCAGGGAAGATGGTACTTAGAGGCTTTTCCCCTATCGCTCTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTGGGAGCATCTCACTGCAAGCCAAGTGCAGGAGAAAGAGGGGCAGGTGAGACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: HLGASHCKPSAGERGAGETHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...CTCACCTGCCCCTCTTTCTCCTGCACTTGGCTTGCAGTGAGATGCTCCCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CATCTTCCCTGGCCTCCGAGAGCAAAAGGACTGTCTCAGCAGAGATGCTCACCCATAATCTACATTAGATaGCAAGTCGGGCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: HLPWPPRAKGLSQQRCSPIIYIR*QVGQLF
Trigger: AAAAAGCTGCCCGACTTGCAATCTAATGTAGATTAT...GGGTGAGCATCTCTGCTGAGACAGTCCTTTTGCTCTCGGAGGCCAGGGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGTGCTGGAAGCCTGACTGTGTGTTTTGCGGCCCATGTGCATCTGGTGACCTCTCCTGGCTTAGTTCTTaGCCAATAGACACAAATTCT +
Preference number: 5 (lower is better)
Translates to: MCWKPDCVFCGPCASGDLSWLSS*PIDTNS
Trigger: AGAATTTGTGTCTATTGGCAAAGAACTAAGCCAGGA...GAGGTCACCAGATGCACATGGGCCGCAAAACACACAGTCAGGCTTCCAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTTGCATGGGTTCATGGTaGTCTACAAATACAGAAACA +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSCMGSW*STNTET
Trigger: TGTTTCTGTATTTGTAGACAACCATGAACCCATGCA...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTTGGCCAACTGTTTCTCATGTCTTCGTGTGGAGCTaGGCCAACTGTTTCTCATCG +
Preference number: 5 (lower is better)
Translates to: PCISSDWSSCGAWPTVSHVFVWS*ANCFSS
Trigger: CGATGAGAAACAGTTGGCCAAGCTCCACACGAAGAC...ATGAGAAACAGTTGGCCAAGCTCCACACGAAGACCAATCTGAAGAAATGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS TCA 90 bp CCTCCACAACTCTCACAGGGCAAGGGCCTTAGCTTCTACCAGAATTaGCACAGTAAAGGCAATGCTGAATTATCTCACAAAGGGACTGTC +
Preference number: 5 (lower is better)
Translates to: PPQLSQGKGLSFYQN*HSKGNAELSHKGTV
Trigger: GACAGTCCCTTTGTGAGATAATTCAGCATTGCCTTTACTGTGTCAATTCTGGTAGAAGCTAAGGCCCTTGCCCTGTGAGAGTTGTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS GCA 90 bp ATGGACAGGCTTCTGGTGAACTTCAGCATTGGAGGAGCCAGAAACTaGCGCTCTTCCTCTGTTATTCCTGATAGAAAGATTCTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: MDRLLVNFSIGGARN*RSSSVIPDRKILLS
Trigger: AGACAGCAGAATCTTTCTATCAGGAATAACAGAGGAAGAGCGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp CTTCATTTTTGGCTTAGGAGGTACTGGGGGTTTGTCAACCATAAATaGTTGCCCATCTGCATAGACTGTGCAGGTGTCCACATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LHFWLRRYWGFVNHK*LPICIDCAGVHILS
Trigger: GGAGAGAATGTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTACCTCCTAAGCCAAAAATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTGGTCGGTGCCCGCTTaGGAGGCGGGGGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLWSVPA*EAGELS
Trigger: AGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAACCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQPETGL*GSQEQW
Trigger: CCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGG...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATCGTCCCGTAGACTCTaGGAGTTGGGGACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQSSRRL*ELGTWG
Trigger: GCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACT +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEVAEVG*RAGIPT
Trigger: AGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAAC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCRISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWFHERV*IKCIAF
Trigger: AAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAA...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGCGAGGCTGGCGGACTaGGCTCCCATTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEARLAD*APIGES
Trigger: GGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACTTTGTTCATCTCTGTaGGCGAGACCACAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAELCSSL*ARPQGL
Trigger: CAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAGAGCCATGGATGCAAACCACAGGAGGAGATGGGGAAAAGAATCTGTGTAGGGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: KEPWMQTTGGDGEKNLCREDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...CCTACACAGATTCTTTTCCCCATCTCCTCCTGTGGTTTGCATCCATGGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCAGGTCTCCCCTCCATaGTGGAATCGTGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMQVSPP*WNRDFV
Trigger: CACAAAGTCACGATTCCACAATGGAGGGGAGACCTG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTGGAGACCTGGAGCTaGGGCAGTTGCACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLETWS*GSCTLA
Trigger: AGCCAGCGTGCAACTGCCCAAGCTCCAGGTCTCCAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GTCCCATGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: VPCVIETAQDTHMVSQGSRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...AGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACATGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGACGGAGGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: GRRSQEVSRVHWCLPTRATHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...AGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACCTCCGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTGCCTGGCACTGAGCACAGAGGTAATACCAACTGTAGGCCCAGGGAAAGTGCCACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: LPGTEHRGNTNCRPRESATHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...GGCACTTTCCCTGGGCCTACAGTTGGTATTACCTCTGTGCTCAGTGCCAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTGCCGCCCACCTTCTGTTCTCAACCCTGGGTTCTGTCTATACTCCATACCCAATAATCTACATTAGATaGCAAGTCGGGCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: PAAHLLFSTLGSVYTPYPIIYIR*QVGQLF
Trigger: AAAAAGCTGCCCGACTTGCAATCTAATGTAGATTAT...TGGGTATGGAGTATAGACAGAACCCAGGGTTGAGAACAGAAGGTGGGCGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CAGCCGCATGTGCCCGCCATGAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTATAATCTACATTAGATaGCAAGTCGGGCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: QPHVPAMSHASSCPSCQSIIYIR*QVGQLF
Trigger: AAAAAGCTGCCCGACTTGCAATCTAATGTAGATTAT...ACTTTGACATGAAGGACAAGAAGACGCATGGCTCATGGCGGGCACATGCGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGACACAAATTCTCTCTaGCTCCAAGCCTTAGCATGT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLDTNSL*LQALAC
Trigger: ACATGCTAAGGCTTGGAGCAAGAGAGAATTTGTGTC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACTCCTGGCTTAGTTCTTaGCCAATAGACACAAATTCT +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDSWLSS*PIDTNS
Trigger: AGAATTTGTGTCTATTGGCAAAGAACTAAGCCAGGA...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGGTGAAGCGGGAGAGCTaGAGGGTGAACTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLVKRES*RVNYKR
Trigger: TCTTTTGTAGTTCACCCTCAAGCTCTCCCGCTTCAC...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTGCATGGGTTCATGGTaGTCTACAAATACAGAAACA +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSCMGSW*STNTET
Trigger: TGTTTCTGTATTTGTAGACAACCATGAACCCATGCA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGGGAATGTTCACCTACTaGCATGGGTTCATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLGMFTY*HGFMVV
Trigger: GACAACCATGAACCCATGCAAGTAGGTGAACATTCC...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCGCTGGCATTGAGGTaGTTGTCACTGTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLALALR*LSLLER
Trigger: GCGCTCCAACAGTGACAACAACCTCAATGCCAGCGC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp GAAATGTGTGCCTTCAACAGTGCAGGACGTGGTTCTGTGAGAACCATACGGGCAAAGGGCACTTCCTTCTaGGTGAAGGCATTTAACAAA +
Preference number: 5 (lower is better)
Translates to: EMCAFNSAGRGSVRTIRAKGTSF*VKAFNK
Trigger: TTTGTTAAATGCCTTCACCAAGAAGGAAGTGCCCTT...TGCCCGTATGGTTCTCACAGAACCACGTCCTGCACTGTTGAAGGCACACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS-3UTR CAA 90 bp AGTTGCAGGATCGGATTTTGGATAAATATTTTATCAAGACACATCGGATATGACCGGATCACCAGCGTGTaGCCCTGGCTCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: SCRIGFWINILSRHIGYDRITSV*PWLSSV
Trigger: GACGGAGGAGAGCCAGGGCAACACGCTGGTGATCCG...GTCATATCCGATGTGTCTTGATAAAATATTTATCCAAAATCCGATCCTGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATATGCATTTCTTCAGATaGGTCTTCGTGTGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDMHFFR*VFVWSL
Trigger: CAAGCTCCACACGAAGACCAATCTGAAGAAATGCAT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS TCA 90 bp AATGCTGAATTATCTCACAAAGGGACTGTCTCAAAGGGTCAAGTGTaGCCTTGTCTCAAGGTCAAGTGTACCTTTGCCTGCAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: NAELSHKGTVSKGQV*PCLKVKCTFACNRV
Trigger: GACCCTGTTGCAGGCAAAGGTACACTTGACCTTGAGACAAGGTCACACTTGACCCTTTGAGACAGTCCCTTTGTGAGATAATTCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 90 bp GACATTTTGGCATTGCAAAGATGGCTCGTTCAAAGTGTTCTCCATTaGCCAGTCACTCTGAGTTGGCTGTCTGGCAATTCTGTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: DILALQRWLVQSVLH*PVTLSWLSGNSVPK
Trigger: CTTGGGAACAGAATTGCCAGACAGCCAACTCAGAGTGACTGGTCAATGGAGAACACTTTGAACGAGCCATCTTTGCAATGCCAAAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS GCA 90 bp TCCTCTGTTATTCCTGATAGAAAGATTCTGCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGAGGGATGCCCAGAAACGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: SSVIPDRKILLSIDF*LRIVPRGMPRNGAF
Trigger: AAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGAAATCAATAGACAGCAGAATCTTTCTATCAGGAATAACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVCLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: PSISLSMKASLCSPKFRLHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGCAGTTGTAAGTGGTaGGGGAAGGTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEGSCKW*GKVVVG
Trigger: CCCCACCACCACCTTCCCCAACCACTTACAACTGCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTACTCTTGTTGCGGAAGTaGGCTTGCGGGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLLLRK*ACGPAF
Trigger: GAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAG...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEIWPLL*RKLACG
Trigger: CCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGAT...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLSSCRA*SSLVAS
Trigger: GGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAACTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGCTCACAGACTTCGCTaGGCATTCAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQAHRLR*AFRCFS
Trigger: GCTGAAACATCTGAATGCCAAGCGAAGTCTGTGAGC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGAGCCATGCGTCTTCTaGTCCTTCATGTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQEPCVF*SFMSKW
Trigger: CCACTTTGACATGAAGGACAAGAAGACGCATGGCTC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGAGGCAGAGAAGCCCTTATTCTCCATCCTGGATGGGTGCTCATGGCAGACAACACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: RGREALILHPGWVLMADNTHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...GTTGTCTGCCATGAGCACCCATCCAGGATGGAGAATAAGGGCTTCTCTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGTGTGATAGAAACTGCCCAAGACACCCACATGGTGAGCCAGGGGTCTGAAGACACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: CVIETAQDTHMVSQGSEDTHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...GTCTTCAGACCCCTGGCTCACCATGTGGGTGTCTTGGGCAGTTTCTATCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAATGAGCTCCTCCGGCTaGTCCCGACCACACGCATCT +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLMSSSG*SRPHAS
Trigger: AGATGCGTGTGGTCGGGACAAGCCGGAGGAGCTCAT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CAA 90 bp GGTCTCAGGAGGTATCTAGAGTGCACTGGTGTCTGCCTACAAGAGCTAGGATCCTCACAGAAGCAGATTTaGACGTTTTGCATAATTCTG +
Preference number: 5 (lower is better)
Translates to: GLRRYLECTGVCLQELGSSQKQI*TFCIIL
Trigger: CAGAATTATGCAAAACGTCAAAATCTGCTTCTGTGA...GGATCCTAGCTCTTGTAGGCAGACACCAGTGCACTCTAGATACCTCCTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAAGTGAAGCGGGAGAGCTaGAGGGTGAACTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEVKRES*RVNYKR
Trigger: TCTTTTGTAGTTCACCCTCAAGCTCTCCCGCTTCAC...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCCGTCCTTTCTTTACGTaGTGCATTGATATGGGCTTC +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRPFFT*CIDMGF
Trigger: GAAGCCCATATCAATGCACAACGTAAAGAAAGGACG...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAATGGGGTTGGTATGGCTaGACAGCGACGAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQWGWYG*TATKSL
Trigger: GAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCA...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000656230.1
CDS-3UTR CAA 90 bp CAAGCGATGCTGAATGTGATCCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTCATCGAGACTGGCTaGTTTATACACCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: QAMLNVIHAFLQIGLRVELIETG*FIHPLL
Trigger: AAGAAGCGGGTGTATAAACAAGCCAGTCTCGATGAG...CTCCACACGAAGACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS-3UTR CAA 90 bp AGTTGCAGGATCGGATTTTGGATAAATATTTTATCAAGACACATCGGATATGACTCCGGGTCGTGGAAATaGGGATCCAGGCCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: SCRIGFWINILSRHIGYDSGSWK*GSRPRS
Trigger: GGACCGAGGCCTGGATCCCAATTTCCACGACCCGGA...GTCATATCCGATGTGTCTTGATAAAATATTTATCCAAAATCCGATCCTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS GCA 90 bp GAATCCAGTCCTTCCCCCGGCTTTGCCAATTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAATTCACTAATAACGTTTGCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: ESSPSPGFANFSRFI*CRIEFNSLITFAFG
Trigger: CCCAAAGGCAAACGTTATTAGTGAATTGAACTCTATCCTACAGCAAATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGACTGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 90 bp TCCTCAGAGCATCTCCAAACCAAATCCCAACACAGTTTCTCCACGTaGCTACTCACCAATGTCTGTTTCCTTGTGGTTCTTGATGTATTC +
Preference number: 5 (lower is better)
Translates to: SSEHLQTKSQHSFST*LLTNVCFLVVLDVF
Trigger: GAATACATCAAGAACCACAAGGAAACAGACATTGGTGAGTAGGCACGTGGAGAAACTGTGTTGGGATTTGGTTTGGAGATGCTCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618363.4
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTCATCACGGCGATTCCTaGGCGTTCGTACACAGAGTT +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLHHGDS*AFVHRV
Trigger: AACTCTGTGTACGAACGCCAAGGAATCGCCGTGATG...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGGAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAAAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: GKVPCQRNGLTEFCGIIKRFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...TTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCGGATATCAAAACTATTaGCAAATTCCAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSGYQNY*QIPGEE
Trigger: CTCCTCCCCTGGAATTTGCAAATAGTTTTGATATCC...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLFHERV*IKCIAF
Trigger: AAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGGCTTGGGGCACGTCTaGTTCCTGAGGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLGLGHV*FLRSCF
Trigger: AAAGCAGGACCTCAGGAACAAGACGTGCCCCAAGCC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGCGGGCAGGGTCTCTTaGTTCATCTCTGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEAGRVS*FISVGE
Trigger: CTCGCCAACAGAGATGAACAAAGAGACCCTGCCCGC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCTCTTTATGTTCACCCAAGTTTAGACTTTCCAGCCAATCGGCCACATCTGGTTAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: PLYVHPSLDFPANRPHLVKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...AACCAGATGTGGCCGATTGGCTGGAAAGTCTAAACTTGGGTGAACATAAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357171.7
ENST00000412252.5
ENST00000654939.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCTGCCATCGATCTCATaGTCCATGAAGGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMLPSIS*SMKASL
Trigger: TAAAGAGGCCTTCATGGACAATGAGATCGATGGCAG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGCAACTCAGTATTTCTTaGGGTACCAGGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLQLSIS*GTRRQT
Trigger: GGTTTGTCTCCTGGTACCCAAAGAAATACTGAGTTG...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CCATCGATCTCATTGTCCATGAAGGCCTCTTTATGTTCACCCAAGTTTAGACTTCCATGTGACATCTGCTaGGCCACCTTGGAATTATGC +
Preference number: 5 (lower is better)
Translates to: PSISLSMKASLCSPKFRLPCDIC*ATLELC
Trigger: GCATAATTCCAAGGTGGCCAAGCAGATGTCACATGG...AAGTCTAAACTTGGGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGGCAGACAACTGCTCTaGTCCTGGAGACCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEGRQLL*SWRPGA
Trigger: AGCTCCAGGTCTCCAGGACAAGAGCAGTTGTCTGCC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTTGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAATGGAAATTCGAGGTATaGTTATGGGGTGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEWKFEV*LWGGGT
Trigger: AGTCCCTCCACCCCATAACAATACCTCGAATTTCCA...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGACTTTCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTAACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: RLSSQSATSGLVHRWTGLTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...TAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TCCAGCCAATCGGCCACATCTGGTTTAGTCCACAGGTGGACAGGTTTAGTTGTAAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: SSQSATSGLVHRWTGLVVRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...TACAACTAAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp ATGTTCATTCTGTGCCCGACTCGAGTTACCCCAAGATCGATGAGGTCCTCCTTCCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: MFILCPTRVTPRSMRSSFPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...GAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS-3UTR CAA 90 bp CTCCATGTGACATCTGCTTGGCCACCTTGGAATTATGCTAACAGATTTGCAGAACCATTTTTGAGAGCTTaGATGACCTCCACAGAGTCG +
Preference number: 5 (lower is better)
Translates to: LHVTSAWPPWNYANRFAEPFLRA*MTSTES
Trigger: CGACTCTGTGGAGGTCATCAAAGCTCTCAAAAATGG...TTCTGCAAATCTGTTAGCATAATTCCAAGGTGGCCAAGCAGATGTCACATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS-3UTR CAA 90 bp GTTTGGAAATTCTCTGATTCCCCACAAAGCACGGGCAGTCCTGTCTGCATGCAGACAATGTCTGTTTCCTaGTGGTTCTTGATGTATTCT +
Preference number: 5 (lower is better)
Translates to: VWKFSDSPQSTGSPVCMQTMSVS*WFLMYS
Trigger: AGAATACATCAAGAACCACAAGGAAACAGACATTGT...CTGCATGCAGACAGGACTGCCCGTGCTTTGTGGGGAATCAGAGAATTTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS TCA 90 bp TGCAAAGATGGCTCGTTCAAAGTGTTCTCCATTGACCAGTCACTCTaGGTTGGCTGTCTGGCAATTCTGTTCCCAAGGAGTACTAATTTA +
Preference number: 5 (lower is better)
Translates to: CKDGSFKVFSIDQSL*VGCLAILFPRSTNL
Trigger: TAAATTAGTACTCCTTGGGAACAGAATTGCCAGACAGCCAACTCAGAGTGACTGGTCAATGGAGAACACTTTGAACGAGCCATCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGAGATTCTGCTGTCTATaGATTTCTGCCTTCGCATCG +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMRFCCL*ISAFAS
Trigger: CGATGCGAAGGCAGAAATCAATAGACAGCAGAATCT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAGTCAACCATAAATGCTaGCCCATCTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQVNHKC*PICIDC
Trigger: ACAGTCTATGCAGATGGGCAAGCATTTATGGTTGAC...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSFHERV*IKCIAF
Trigger: AAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAA...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITETTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGTCCTTCCCCCGGCTTaGCCAATTTCTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLVLPPA*PISLGS
Trigger: TGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGGAC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAGCCATGCGTCTTCTTGTCCTTCATGTCAAAGTGGATGCTCACCTGCTCTGATACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: EPCVFLSFMSKWMLTCSDTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...ATCAGAGCAGGTGAGCATCCACTTTGACATGAAGGACAAGAAGACGCATGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCAGAGACCGATTCATCTaGGCAACATGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVRDRFI*ATCVYL
Trigger: CAAATAAACACATGTTGCCAAGATGAATCGGTCTCT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AACCCTGGGTTCTGTCTATACTCCATACCCACTGGGTCCTCAAAGAAGCTGTTGCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: NPGFCLYSIPTGSSKKLLPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...CAACAGCTTCTTTGAGGACCCAGTGGGTATGGAGTATAGACAGAACCCAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp AAAAGTTTCTCTGCCTTTCAGGCCCATGATGGGGCACTGGACAAATGCATCTGGACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: KSFSAFQAHDGALDKCIWTHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...CCAGATGCATTTGTCCAGTGCCCCATCATGGGCCTGAAAGGCAGAGAAACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGTTTGGGAGAAACTATaGGATGGTGAAGCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLVWEKL*DGEAGE
Trigger: CTCTCCCGCTTCACCATCCAATAGTTTCTCCCAAAC...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLLLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGACAACTTGGAGGTCCTaGGCTGGAGAACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLTTWRS*AGEPWP
Trigger: TGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLERIGL*ISVTSP
Trigger: GGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACTGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: TGCQSSTNRSHEFRLVIVTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...GACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TGGCTGCCAAAGTTCAACAAACCGAAGTCACGAGTTTCGACTGGTTATCGTCTGCGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: WLPKFNKPKSRVSTGYRLRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...CAGACGATAACCAGTCGAAACTCGTGACTTCGGTTTGTTGAACTTTGGCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCAAAAACCTGACATTCGAGTATCCTCCAAATGGGGGAGAATGTGCTGGAAGCCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: TKNLTFEYPPNGGECAGSPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...GCTTCCAGCACATTCTCCCCCATTTGGAGGATACTCGAATGTCAGGTTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGGTGTTCACTGTTTGTTaGCAATCAGAACCACAACCT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMVFTVC*QSEPQP
Trigger: AGGTTGTGGTTCTGATTGCAAACAAACAGTGAACAC...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp AGGCAGATTAGCTCAGTGACAGGAGCCTGTTTACTCGATGAGAGAGATTTTTCTGACAGTGTTCACTGTTaGTTTGCAATCAGAACCACA +
Preference number: 5 (lower is better)
Translates to: RQISSVTGACLLDERDFSDSVHC*FAIRTT
Trigger: TGTGGTTCTGATTGCAAACAAACAGTGAACACTGTC...AGAAAAATCTCTCTCATCGAGTAAACAGGCTCCTGTCACTGAGCTAATCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAATCTTTACGTTGTGCATaGATATGGGCTTCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQSLRCA*IWASQF
Trigger: GAACTGAGAAGCCCATATCAATGCACAACGTAAAGA...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS TCA 90 bp AACAGCACTATCTGTGCCAAGGGGGCTGAACATTTGTCTCCTCTGTaGGATAACTTTCTTCTAAGACACAGTTTCCTATGTATGAAATGG +
Preference number: 5 (lower is better)
Translates to: NSTICAKGAEHLSPL*DNFLLRHSFLCMKW
Trigger: CCATTTCATACATAGGAAACTGTGTCTTAGAAGAAAGTTATCTCACAGAGGAGACAAATGTTCAGCCCCCTTGGCACAGATAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470759.5
CDS GCA 90 bp AACAAAGCTATCTACATCTTCTTCCACGAGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGATGGGCTTCATTTTTGGCTTAGGAGG +
Preference number: 5 (lower is better)
Translates to: NKAIYIFFHERVLIK*IAFVNDGLHFWLRR
Trigger: CCTCCTAAGCCAAAAATGAAGCCCATCATTCACAAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAAGAAGATGTAGATAGCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CAATATTGTGGCCCACACACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTTGCCTGTGGCCGACTTaGACAACATTCTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: QYCGPHTKSHCQINWIMLCLWPT*TTFSLL
Trigger: TAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCA...AAGCATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGTGGGCCACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLCLQSW*VGWSST
Trigger: CGTTGAACTCCAGCCAACCAACCAACTCTGCAGACA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGTTGCTGTCTGCAGAGTaGGTTGGTTGGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLLLSAE*VGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAA...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GGCATTCAGATGTTTCAGCACGAGCCCATCTCTACTTATAACAAGAGCAGTCTGTCACAGAAGCAGATTTaGACGTTTTGCATAATTCTG +
Preference number: 5 (lower is better)
Translates to: GIQMFQHEPISTYNKSSLSQKQI*TFCIIL
Trigger: CAGAATTATGCAAAACGTCAAAATCTGCTTCTGTGA...CAGACTGCTCTTGTTATAAGTAGAGATGGGCTCGTGCTGAAACATCTGAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGTGAAGCGGGAGAGCTaGAGGGTGAACTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEVKRES*RVNYKR
Trigger: TCTTTTGTAGTTCACCCTCAAGCTCTCCCGCTTCAC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAAACCACTTTGAAGAAATaGTCCTTCAATGACGAAGTT +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQTTLKK*SFNDEV
Trigger: AACTTCGTCATTGAAGGACAATTTCTTCAAAGTGGT...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp TTAAGAAAGGGAATAACATCTGGCCCTCACCAACTGGCTGCCAAAGTTCAACAACGCCTTAATATTCAATaGACTTCAAGTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: LRKGITSGPHQLAAKVQQRLNIQ*TSSWIG
Trigger: TCCAATCCAACTTGAAGTCAATTGAATATTAAGGCG...TTGTTGAACTTTGGCAGCCAGTTGGTGAGGGCCAGATGTTATTCCCTTTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp GAAAGTGCCATGCCAAAGGAATGGACTCACGGAATTTTGCGGTATCATCAAATGCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: ESAMPKEWTHGILRYHQMPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...CATTTGATGATACCGCAAAATTCCGTGAGTCCATTCCTTTGGCATGGCACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLISMFF*SSPFRS
Trigger: AGACCGGAAAGGCGATGACAAGAAGAACATGCTGAT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGAAGGCTTATTTGAGATaGGCTGTTGCAGTATCGAGG +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEKAYLR*AVAVSR
Trigger: CCTCGATACTGCAACAGCCAATCTCAAATAAGCCTT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGAAGACCCAGCCATGTaGTGGACACAACTCAGTATT +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLEDPAM*WTQLSI
Trigger: AATACTGAGTTGTGTCCACAACATGGCTGGGTCTTC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAGTGTTCACTGTTTGTTaGCAATCAGAACCACAACCT +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQVFTVC*QSEPQP
Trigger: AGGTTGTGGTTCTGATTGCAAACAAACAGTGAACAC...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAAGACAGTGTTCACTGTTaGTTTGCAATCAGAACCACA +
Preference number: 5 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSEDSVHC*FAIRTT
Trigger: TGTGGTTCTGATTGCAAACAAACAGTGAACACTGTC...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGGACACAAATTCTCTCTaGCTCCAAGCCTTAGCATGT +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITEDTNSL*LQALAC
Trigger: ACATGCTAAGGCTTGGAGCAAGAGAGAATTTGTGTC...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ATGGACTCACGGAATTTTGCGGTATCATCAAATGGAAGACAAATTAATGGCCAAACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: MDSRNFAVSSNGRQINGQTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...TTGGCCATTAATTTGTCTTCCATTTGATGATACCGCAAAATTCCGTGAGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp CGGGCAGCTTTTTGTTTAATTCAGACAGTGTTCACTGTTTGTTTGCAATCAGAATCCTGGCTTAGTTCTTaGCCAATAGACACAAATTCT +
Preference number: 5 (lower is better)
Translates to: RAAFCLIQTVFTVCLQSESWLSS*PIDTNS
Trigger: AGAATTTGTGTCTATTGGCAAAGAACTAAGCCAGGA...TTCTGATTGCAAACAAACAGTGAACACTGTCTGAATTAAACAAAAAGCTGCCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409161.5
ENST00000449833.6
ENST00000601538.6
CDS-3UTR CAA 90 bp ACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTAACATGTGTTTATTTGTaGGTCAGTGCAGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: TCVYLLVSAGSDRSITSLTCVYL*VSAGSD
Trigger: ATCAGAACCTGCACTGACCAACAAATAAACACATGT...TAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGGCAACATGTGTTTATTaGTTGGTCAGTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLATCVY*LVSAGS
Trigger: AGAACCTGCACTGACCAACAAATAAACACATGTTGC...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACAAAAAGTCATTGCCAGATCAACTGGATAATGCTTGCTTGTTCAATAACTGAGAATGAGGCAGCAGTTTaGTTTTGCTTTTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TKSHCQINWIMLACSITENEAAV*FCFSLK
Trigger: CTTCAAGGAAAAGCAAAACAAAACTGCTGCCTCATT...CTCAGTTATTGAACAAGCAAGCATTATCCAGTTGATCTGGCAATGACTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGCCTGGAAAAGGTATCTaGGCAGGTATACATAATTTA +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLPGKGI*AGIHNL
Trigger: TAAATTATGTATACCTGCCAAGATACCTTTTCCAGG...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS-3UTR CAA 90 bp ACCCTGGAAAAGGTATCTTGGCAGGTATACATAATTTACATTTTGAGAGATTTGACACACAAAAAGTCATaGCCAGATCAACTGGATAAT +
Preference number: 5 (lower is better)
Translates to: TLEKVSWQVYIIYILRDLTHKKS*PDQLDN
Trigger: ATTATCCAGTTGATCTGGCAATGACTTTTTGTGTGT...CAAATCTCTCAAAATGTAAATTATGTATACCTGCCAAGATACCTTTTCCAGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GCCGTCCTCGCCTGCGCCGCCCAGCCTGTTGAGCGATaGGGACCGGCTGCGGGGCCCGGGCACGTAGCTCCC +
Preference number: 6 (lower is better)
Translates to: AVLACAAQPVER*GPAAGPGHVAP
Trigger: GGGAGCTACGTGCCCGGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGCAGGCGAGGACGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS CAA 72 bp GGCCTCTTGCCGTCCTCGCCTGCGCCGCCCAGCCTGTaGAGCGATGGGGACCGGCTGCGGGGCCCGGGCACG +
Preference number: 6 (lower is better)
Translates to: GLLPSSPAPPSL*SDGDRLRGPGT
Trigger: CGTGCCCGGGCCCCGCAGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAGAGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS GCA 72 bp CCCGGGGCCGGCTGTGCCGCTGCTCGCGGAGGGCACTaGTGGGCTGCTCTCGGGCCCCTGGGCTTTGGACGT +
Preference number: 6 (lower is better)
Translates to: PGAGCAAARGGH*WAALGPLGFGR
Trigger: ACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GAGGTCCTTGGCTGGAGAACCTTGGCCATCCCAGGCTaGGCACTGCCCGGCGGGGGCGGGGGAGCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: EVLGWRTLAIPG*ALPGGGGGAGG
Trigger: CCCGCCCGCTCCCCCGCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGGACCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GGGGCCGGCTGTGCCGCTGCTCGCGGAGGGCACTGCTaGGCTGCTCTCGGGCCCCTGGGCTTTGGACGTGGA +
Preference number: 6 (lower is better)
Translates to: GAGCAAARGGHC*AALGPLGFGRG
Trigger: TCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GCTGGCCAGGACGCCGCCCAGGGCAAAGAAAGTAAGTaGCCCGAACGGCGGCGGCGGCAGCGGCGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: AGQDAAQGKESK*PERRRRQRRPQ
Trigger: CTGAGGCCGCCGCTGCCGCCGCCGCCGTTCGGGCCACTTACTTTCTTTGCCCTGGGCGGCGTCCTGGCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS CCA 72 bp GGGACCGGCTGCGGGGCCCGGGCACGTAGCTCCCAATaGTCTTCGCGGCCCCCTCGGGCTTGCTGGGCATCT +
Preference number: 6 (lower is better)
Translates to: GTGCGARARSSQ*SSRPPRACWAS
Trigger: AGATGCCCAGCAAGCCCGAGGGGGCCGCGAAGACCATTGGGAGCTACGTGCCCGGGCCCCGCAGCCGGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS GCA 72 bp GTGGGTGGACATAATTCCCGGGGCCGGCTGTGCCGCTaGTCGCGGAGGGCACTGCTGGGCTGCTCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: VGGHNSRGRLCR*SRRALLGCSRA
Trigger: GGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCCGGGAATTATGTCCACCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp CCCAGGGTGGCCATGGGCGTCCCCGAGGGTCCCCTGTaGCTTGCCGCTCTGGCTGGGCAGGCAAAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: PRVAMGVPEGPL*LAALAGQAKPS
Trigger: TGAGGGCTTTGCCTGCCCAGCCAGAGCGGCAAGGCACAGGGGACCCTCGGGGACGCCCATGGCCACCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp TCGTCAGGCCGCAGCTGGCTCGGTGGCTCCGGGGCCTaGGGGTCGATCTCCATGCTGCTGCCCTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SSGRSWLGGSGA*GSISMLLPWLL
Trigger: GAGCAGCCAGGGCAGCAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACCGAGCCAGCTGCGGCCTGACGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp GGCATCTGCTGCAGCAGCTGGGGTGACAGGCTGCGGTaGGAGGTGGCCGTGGAGCAGACGGCCCAGTCGGGA +
Preference number: 6 (lower is better)
Translates to: GICCSSWGDRLR*EVAVEQTAQSG
Trigger: TCCCGACTGGGCCGTCTGCTCCACGGCCACCTCGCACCGCAGCCTGTCACCCCAGCTGCTGCAGCAGATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS GCA 72 bp ATGCCAGAGAGGCTGCGGCCTCTTGCCGTCCTCGCCTaGGCCGCCCAGCCTGTTGAGCGATGGGGACCGGCT +
Preference number: 6 (lower is better)
Translates to: MPERLRPLAVLA*AAQPVERWGPA
Trigger: AGCCGGTCCCCATCGCTCAACAGGCTGGGCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS GCA 72 bp GGTGGCCATGGGCGTCCCCGAGGGTCCCCTGTGCCTTaGCGCTCTGGCTGGGCAGGCAAAGCCCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: GGHGRPRGSPVP*RSGWAGKALRA
Trigger: AGCTCTGAGGGCTTTGCCTGCCCAGCCAGAGCGGCAAGGCACAGGGGACCCTCGGGGACGCCCATGGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp CTCGCGGAGGGCACTGCTGGGCTGCTCTCGGGCCCCTaGGCTTTGGACGTGGAATTCAGCGGCCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LAEGTAGLLSGP*ALDVEFSGLPA
Trigger: GGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GGATCACCAGCGTGTTGCCCTGGCTCTCCTCCGTCCTaGCACCGCCCGGCTTCTCCGCAGTGGCCCGGATCG +
Preference number: 6 (lower is better)
Translates to: GSPACCPGSPPS*HRPASPQWPGS
Trigger: CGATCCGGGCCACTGCGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCCAGGGCAACACGCTGGTGATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp GCCGGGGCCTCTCGGAAGGGCACACTGCCGGTCCAATaGGACTGCTCCCCGCTGCAGGTCCTGTGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: AGASRKGTLPVQ*DCSPLQVLWKR
Trigger: GCGCTTCCACAGGACCTGCAGCGGGGAGCAGTCCCATTGGACCGGCAGTGTGCCCTTCCGAGAGGCCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CAA 90 bp CTGCTCGCGGAGGGCACTGCTGGGCTGCTCTCGGGCCCCTGGGCTTaGGACGTGGAATTCAGCGGCCTCCCAGCCTCACCCGGAGCACTG +
Preference number: 6 (lower is better)
Translates to: LLAEGTAGLLSGPWA*DVEFSGLPASPGAL
Trigger: CAGTGCTCCGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp GGGCCAGCGGGGAGCTGGGATCAAGCAGCCGCCCTGTaGGTGGGTGGACATAATTCCCGGGGCCGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: GPAGSWDQAAAL*VGGHNSRGRLC
Trigger: GCACAGCCGGCCCCGGGAATTATGTCCACCCACTCACAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp CGGCTGTGCCGCTGCTCGCGGAGGGCACTGCTGGGCTaGTCTCGGGCCCCTGGGCTTTGGACGTGGAATTCA +
Preference number: 6 (lower is better)
Translates to: RLCRCSRRALLG*SRAPGLWTWNS
Trigger: TGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp TCCGTCTCCTGCCGCCTCAGGGGTCCCCGGGTGTTCTaGCTGGTGACCGTAGGGAAGCCGGCATCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SVSCRLRGPRVF*LVTVGKPASRL
Trigger: CAGCCTGGATGCCGGCTTCCCTACGGTCACCAGGCAGAACACCCGGGGACCCCTGAGGCGGCAGGAGACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp CCAAGAGCAAAAGGCGACCCGACATGCCAGAGAGGCTaGGGCCTCTTGCCGTCCTCGCCTGCGCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PRAKGDPTCQRG*GLLPSSPAPPS
Trigger: GCTGGGCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCATGTCGGGTCGCCTTTTGCTCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS GCA 72 bp GGGACCCGGGGAGAGGTGGCGGGTGTCTGGGCACGGTaGACTTCCGAGCATAGCTGGGCATGCCAGACCCAG +
Preference number: 6 (lower is better)
Translates to: GTRGEVAGVWAR*TSEHSWACQTQ
Trigger: CTGGGTCTGGCATGCCCAGCTATGCTCGGAAGTGCACCGTGCCCAGACACCCGCCACCTCTCCCCGGGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468619.6
ENST00000656230.1
CDS GCA 72 bp GCCTCTCGGAAGGGCACACTGCCGGTCCAATGGGACTaGTCCCCGCTGCAGGTCCTGTGGAAGCGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: ASRKGTLPVQWD*SPLQVLWKRGA
Trigger: AGCCCCGCGCTTCCACAGGACCTGCAGCGGGGAGCAGTCCCATTGGACCGGCAGTGTGCCCTTCCGAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CCA 72 bp GGAGCGCAGGGTGAGGGCTGTGGTCGGTGCCCGCTTTaGAGGCGGGGGAGCTTTCTTCCTGGCGGTGTCGTC +
Preference number: 6 (lower is better)
Translates to: GAQGEGCGRCPL*RRGSFLPGGVV
Trigger: GACGACACCGCCAGGAAGAAAGCTCCCCCGCCTCCAAAGCGGGCACCGACCACAGCCCTCACCCTGCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409161.5
ENST00000409530.5
ENST00000412252.5
ENST00000424924.5
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GACGGTCAGGCTTTCGTCAGGCCGCAGCTGGCTCGGTaGCTCCGGGGCCTGGGGGTCGATCTCCATGCTGCT +
Preference number: 6 (lower is better)
Translates to: DGQAFVRPQLAR*LRGLGVDLHAA
Trigger: AGCAGCATGGAGATCGACCCCCAGGCCCCGGAGCCACCGAGCCAGCTGCGGCCTGACGAAAGCCTGACCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CTGCTGGGCTGCTCTCGGGCCCCTGGGCTTTGGACGTaGAATTCAGCGGCCTCCCAGCCTCACCCGGAGCAC +
Preference number: 6 (lower is better)
Translates to: LLGCSRAPGLWT*NSAASQPHPEH
Trigger: GTGCTCCGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp AGGGCACTGCTGGGCTGCTCTCGGGCCCCTGGGCTTTaGACGTGGAATTCAGCGGCCTCCCAGCCTCACCCG +
Preference number: 6 (lower is better)
Translates to: RALLGCSRAPGL*TWNSAASQPHP
Trigger: CGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAGGGGCCCGAGAGCAGCCCAGCAGTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp TCGCCCCACAACTTGGAGGTCCTTGGCTGGAGAACCTaGGCCATCCCAGGCTGGGCACTGCCCGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: SPHNLEVLGWRT*AIPGWALPGGG
Trigger: GCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp GGGCCTGGGGGTCGATCTCCATGCTGCTGCCCTGGCTaGTCTTGCCGCTGCTGCTGGTGGACGGCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: GPGGRSPCCCPG*SCRCCWWTAPS
Trigger: TGAAGGAGCCGTCCACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACCCCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp CGGCCCAGGTCGGTCTCGTACTTGTTCTCCGTCTCCTaGCGCCTCAGGGGTCCCCGGGTGTTCTGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: RPRSVSYLFSVS*RLRGPRVFCLV
Trigger: CACCAGGCAGAACACCCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAAGTACGAGACCGACCTGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CAGCGGGGAGCTGGGATCAAGCAGCCGCCCTGTGAGTaGGTGGACATAATTCCCGGGGCCGGCTGTGCCGCT +
Preference number: 6 (lower is better)
Translates to: QRGAGIKQPPCE*VDIIPGAGCAA
Trigger: AGCGGCACAGCCGGCCCCGGGAATTATGTCCACCCACTCACAGGGCGGCTGCTTGATCCCAGCTCCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp TGGAGCCCACCGCGACGATGGTTCTGCCGGGCACGGTaGTGGGCTCGGGGGCAGCGGAGATCTGTAAAGCAC +
Preference number: 6 (lower is better)
Translates to: WSPPRRWFCRAR*WARGQRRSVKH
Trigger: GTGCTTTACAGATCTCCGCTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp AAATCACCGCCTCTTCCATGGAGCCCACCGCGACGATaGTTCTGCCGGGCACGGTGGTGGGCTCGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: KSPPLPWSPPRR*FCRARWWARGQ
Trigger: CTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGATTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CAGGCCCGGGTCTGCCTCCACAGCTGCGGCCTCCAGTaGTGTGTGTGGGCTGCAGCTTCAGACAGGGTCACC +
Preference number: 6 (lower is better)
Translates to: QARVCLHSCGLQ*CVWAAASDRVT
Trigger: GGTGACCCTGTCTGAAGCTGCAGCCCACACACACCACTGGAGGCCGCAGCTGTGGAGGCAGACCCGGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 72 bp TGCTGCGGTCAGCGCGGGTTTCTGCCTGGCTGTCCCTaGGCTTACACTGGACCTCCTCCACGCACTCCGCCG +
Preference number: 6 (lower is better)
Translates to: CCGQRGFLPGCP*AYTGPPPRTPP
Trigger: CGGCGGAGTGCGTGGAGGAGGTCCAGTGTAAGCCCAGGGACAGCCAGGCAGAAACCCGCGCTGACCGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468619.6
ENST00000470759.5
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CAA 72 bp TCGCCTTTCCGGTCTCGGCCCAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGCCTCAGGGGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: SPFRSRPRSVSY*FSVSCRLRGPR
Trigger: CCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAAGTACGAGACCGACCTGGGCCGAGACCGGAAAGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp TCAGCAGCGGCGGCGTCGGGAATGAGCTCCTCCGGCTaGTCCCGACCACACGCATCTTCCAGGGAAGCCCGG +
Preference number: 6 (lower is better)
Translates to: SAAAASGMSSSG*SRPHASSREAR
Trigger: CCGGGCTTCCCTGGAAGATGCGTGTGGTCGGGACAAGCCGGAGGAGCTCATTCCCGACGCCGCCGCTGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS GCA 72 bp GGGCTGGAGGAAACAGGCCAGTGGGCTCGTCCAAGTTaGAAGACTGGGCCCAGCCGATGGCAGGGCGATGGG +
Preference number: 6 (lower is better)
Translates to: GLEETGQWARPS*KTGPSRWQGDG
Trigger: CCCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS GCA 72 bp AGGGCACACTGCCGGTCCAATGGGACTGCTCCCCGCTaGAGGTCCTGTGGAAGCGCGGGGCTGGAGGAAACA +
Preference number: 6 (lower is better)
Translates to: RAHCRSNGTAPR*RSCGSAGLEET
Trigger: TGTTTCCTCCAGCCCCGCGCTTCCACAGGACCTGCAGCGGGGAGCAGTCCCATTGGACCGGCAGTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CCA 72 bp CCACGTTGGACTGCTTCACCAGCATCCCCTTCCGCCTaGCGGGCTTGGCGGGGACGTAGACGGCTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: PRWTASPASPSA*RAWRGRRRLCW
Trigger: CCAGCAAAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGCTGGTGAAGCAGTCCAACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CGCCACCCACGAAATGGTTTTCGGGCTCCCTGGGCGTaGCACTCGGCATGGGGGATGACAGCTGCTCAGCGC +
Preference number: 6 (lower is better)
Translates to: RHPRNGFRAPWA*HSAWGMTAAQR
Trigger: GCGCTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CCTCGGCGCCACCCACGAAATGGTTTTCGGGCTCCCTaGGCGTGGCACTCGGCATGGGGGATGACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PRRHPRNGFRAP*AWHSAWGMTAA
Trigger: AGCAGCTGTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GGGCCTCCCCTTTGGGTCCCTGTTGAGACTCCTTCATaGCTCGGTCCCTTGCGGAGAGTGCCAGGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: GPPLWVPVETPS*LGPLRRVPGPA
Trigger: CGCTGGCCCTGGCACTCTCCGCAAGGGACCGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp AGCCCACCGCGACGATGGTTCTGCCGGGCACGGTGGTaGGCTCGGGGGCAGCGGAGATCTGTAAAGCACCTT +
Preference number: 6 (lower is better)
Translates to: SPPRRWFCRARW*ARGQRRSVKHL
Trigger: AAGGTGCTTTACAGATCTCCGCTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp AGAGCCTCCCGGGCACGGCACTGTAGAGCTTCCGCTTaGGCCCCGGGTACTCGAAGGCCGAGAGTGAGTCCT +
Preference number: 6 (lower is better)
Translates to: RASRARHCRASA*APGTRRPRVSP
Trigger: AGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGAAGCTCTACAGTGCCGTGCCCGGGAGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS CCA 72 bp CTGCTCCCCGCTGCAGGTCCTGTGGAAGCGCGGGGCTaGAGGAAACAGGCCAGTGGGCTCGTCCAAGTTGCA +
Preference number: 6 (lower is better)
Translates to: LLPAAGPVEARG*RKQASGLVQVA
Trigger: TGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCCACAGGACCTGCAGCGGGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CAA 72 bp GAGCAGACGGCCCAGTCGGGAGCGCTGGCATTGAGGTaGTTGTCACTGTTGGAGCGCAGCAGGACCCGGGGG +
Preference number: 6 (lower is better)
Translates to: EQTAQSGALALR*LSLLERSRTRG
Trigger: CCCCCGGGTCCTGCTGCGCTCCAACAGTGACAACAACCTCAATGCCAGCGCTCCCGACTGGGCCGTCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS CAA 72 bp GGGGCTGGAGGAAACAGGCCAGTGGGCTCGTCCAAGTaGCAAGACTGGGCCCAGCCGATGGCAGGGCGATGG +
Preference number: 6 (lower is better)
Translates to: GAGGNRPVGSSK*QDWAQPMAGRW
Trigger: CCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CAA 90 bp GTCGGGATAGGGATGGAGCACGTCTTCTCGGGGCTGTCCTCCACGTaGGACTGCTTCACCAGCATCCCCTTCCGCCTGGCGGGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: VGIGMEHVFSGLSST*DCFTSIPFRLAGLA
Trigger: CGCCAAGCCCGCCAGGCGGAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCCCGAGAAGACGTGCTCCATCCCTATCCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp GACCCTGTCACCGCGGTGAAGGGGGATCTCGCCGTCCACTTGGGGTaGGTATGGCTTGACAGCGACGAAGAGCCTCCCGGGCACGGCACT +
Preference number: 6 (lower is better)
Translates to: DPVTAVKGDLAVHLG*VWLDSDEEPPGHGT
Trigger: AGTGCCGTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CAA 90 bp TTCGTCTGCTGCAGGTCATGGATGACCACGCGGATCACCAGCGTGTaGCCCTGGCTCTCCTCCGTCCTGGCACCGCCCGGCTTCTCCGCA +
Preference number: 6 (lower is better)
Translates to: FVCCRSWMTTRITSV*PWLSSVLAPPGFSA
Trigger: TGCGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCCAGGGCAACACGCTGGTGATCCGCGTGGTCATCCATGACCTGCAGCAGACGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CAA 90 bp TGGAAGCGCGGGGCTGGAGGAAACAGGCCAGTGGGCTCGTCCAAGTaGCAAGACTGGGCCCAGCCGATGGCAGGGCGATGGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: WKRGAGGNRPVGSSK*QDWAQPMAGRWERG
Trigger: TCCTCTCTCCCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS TCA 72 bp CCGTGGAGCAGACGGCCCAGTCGGGAGCGCTGGCATTaGGGTTGTTGTCACTGTTGGAGCGCAGCAGGACCC +
Preference number: 6 (lower is better)
Translates to: PWSRRPSRERWH*GCCHCWSAAGP
Trigger: GGGTCCTGCTGCGCTCCAACAGTGACAACAACCTCAATGCCAGCGCTCCCGACTGGGCCGTCTGCTCCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS TCA 72 bp GGGGGATCTCGCCGTCCACTTGGGGTTGGTATGGCTTaGCAGCGACGAAGAGCCTCCCGGGCACGGCACTGT +
Preference number: 6 (lower is better)
Translates to: GGSRRPLGVGMA*QRRRASRARHC
Trigger: ACAGTGCCGTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS GCA 72 bp GAGCACGTCTTCTCGGGGCTGTCCTCCACGTTGGACTaGTTCACCAGCATCCCCTTCCGCCTGGCGGGCTTG +
Preference number: 6 (lower is better)
Translates to: EHVFSGLSSTLD*FTSIPFRLAGL
Trigger: CAAGCCCGCCAGGCGGAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAGGACAGCCCCGAGAAGACGTGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp ACTGCTTCACCAGCATCCCCTTCCGCCTGGCGGGCTTaGCGGGGACGTAGACGGCTTTGCTGGCGATCTTCC +
Preference number: 6 (lower is better)
Translates to: TASPASPSAWRA*RGRRRLCWRSS
Trigger: GGAAGATCGCCAGCAAAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGCTGGTGAAGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GTGAAGGGGGATCTCGCCGTCCACTTGGGGTTGGTATaGCTTGACAGCGACGAAGAGCCTCCCGGGCACGGC +
Preference number: 6 (lower is better)
Translates to: VKGDLAVHLGLV*LDSDEEPPGHG
Trigger: GCCGTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CCA 72 bp GCGGGTGTCTGGGCACGGTGCACTTCCGAGCATAGCTaGGCATGCCAGACCCAGCGTGCTGGTGACAAAGCC +
Preference number: 6 (lower is better)
Translates to: AGVWARCTSEHS*ACQTQRAGDKA
Trigger: GGCTTTGTCACCAGCACGCTGGGTCTGGCATGCCCAGCTATGCTCGGAAGTGCACCGTGCCCAGACACCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468619.6
ENST00000656230.1
CDS CCA 72 bp TCCTGTGGAAGCGCGGGGCTGGAGGAAACAGGCCAGTaGGCTCGTCCAAGTTGCAAGACTGGGCCCAGCCGA +
Preference number: 6 (lower is better)
Translates to: SCGSAGLEETGQ*ARPSCKTGPSR
Trigger: TCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCCTCCAGCCCCGCGCTTCCACAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CAA 72 bp GCCGTGGAGCAGACGGCCCAGTCGGGAGCGCTGGCATaGAGGTTGTTGTCACTGTTGGAGCGCAGCAGGACC +
Preference number: 6 (lower is better)
Translates to: AVEQTAQSGALA*RLLSLLERSRT
Trigger: GGTCCTGCTGCGCTCCAACAGTGACAACAACCTCAATGCCAGCGCTCCCGACTGGGCCGTCTGCTCCACGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000645599.1
ENST00000656230.1
CDS CAA 72 bp AGGGGGATCTCGCCGTCCACTTGGGGTTGGTATGGCTaGACAGCGACGAAGAGCCTCCCGGGCACGGCACTG +
Preference number: 6 (lower is better)
Translates to: RGISPSTWGWYG*TATKSLPGTAL
Trigger: CAGTGCCGTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CAA 72 bp ACCGCGGTGAAGGGGGATCTCGCCGTCCACTTGGGGTaGGTATGGCTTGACAGCGACGAAGAGCCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: TAVKGDLAVHLG*VWLDSDEEPPG
Trigger: CCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCACCGCGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CAA 72 bp CGGAGAAGCTCTGGGCCATCTCGTCCTCGCTGGATGTaGGGCTGCGCGGCATGGCTGCCTGTGTCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RRSSGPSRPRWM*GCAAWLPVSEV
Trigger: CACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CAA 90 bp GCCACCCTCGGTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCCTCGGGTTTATCGAGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ATLGSTAMFSAAREG*EAGTISSGLSSSSS
Trigger: GCTGGAGGAGCTCGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424924.5
ENST00000449116.6
CDS TCA 72 bp TTCGGGCTCCCTGGGCGTGGCACTCGGCATGGGGGATaGCAGCTGCTCAGCGCTGTCCTCGTCAGCAAAATC +
Preference number: 6 (lower is better)
Translates to: FGLPGRGTRHGG*QLLSAVLVSKI
Trigger: GATTTTGCTGACGAGGACAGCGCTGAGCAGCTGTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp ACTCGGACCACTGCTCCTCGGGGTCTCCACGGAGACTaGGTCCGTGGGGCGGCCTCATCTACTACTGCCTGT +
Preference number: 6 (lower is better)
Translates to: TRTTAPRGLHGD*VRGAASSTTAC
Trigger: ACAGGCAGTAGTAGATGAGGCCGCCCCACGGACTCAGTCTCCGTGGAGACCCCGAGGAGCAGTGGTCCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS GCA 72 bp TGCAGGGCGTTGTCCAGCTTAGTGGCGTCCACGGTGTaGACCATCAGCAGGCCAGCCGACTTCTGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: CRALSSLVASTV*TISRPADFCWD
Trigger: GTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACACCGTGGACGCCACTAAGCTGGACAACGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GAGGGATGCGGAATGGCAAAATCACCGCCTCTTCCATaGAGCCCACCGCGACGATGGTTCTGCCGGGCACGG +
Preference number: 6 (lower is better)
Translates to: EGCGMAKSPPLP*SPPRRWFCRAR
Trigger: CCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCCATGGAAGAGGCGGTGATTTTGCCATTCCGCATCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GTCCACGGATGCCAGAGGGGGAGGAGGGATGCGGAATaGCAAAATCACCGCCTCTTCCATGGAGCCCACCGC +
Preference number: 6 (lower is better)
Translates to: VHGCQRGRRDAE*QNHRLFHGAHR
Trigger: GCGGTGGGCTCCATGGAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCTCCCCCTCTGGCATCCGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp TCTGTGACGTCGCCCCACAACTTGGAGGTCCTTGGCTaGAGAACCTTGGCCATCCCAGGCTGGGCACTGCCC +
Preference number: 6 (lower is better)
Translates to: SVTSPHNLEVLG*RTLAIPGWALP
Trigger: GGGCAGTGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGTCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CCGGGCTTCTCGAGGGATGCCCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGGCGTCATCACGGCGAT +
Preference number: 6 (lower is better)
Translates to: PGFSRDAQKRGF*APRNSGRHHGD
Trigger: ATCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGAAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS CCA 72 bp GTCTGCCTCCACAGCTGCGGCCTCCAGTGGTGTGTGTaGGCTGCAGCTTCAGACAGGGTCACCCTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: VCLHSCGLQWCV*AAASDRVTLQD
Trigger: ATCCTGGAGGGTGACCCTGTCTGAAGCTGCAGCCCACACACACCACTGGAGGCCGCAGCTGTGGAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 72 bp GGAGAAGCTCTGGGCCATCTCGTCCTCGCTGGATGTTaGGCTGCGCGGCATGGCTGCCTGTGTCAGAGGTGT +
Preference number: 6 (lower is better)
Translates to: GEALGHLVLAGC*AARHGCLCQRC
Trigger: ACACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp AACCCAGACAGCAGGGCGTGGCTTGTGTGGCCAGTGTaGGCTGCGCTCACCTTCCTGAGGCAGCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: NPDSRAWLVWPV*AALTFLRQHCP
Trigger: TGGACAGTGCTGCCTCAGGAAGGTGAGCGCAGCCCACACTGGCCACACAAGCCACGCCCTGCTGTCTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp GGCACGGAGACAGGGACAGAGTGGGGTCCTGTCACCTaGGTAGAACGTGCCAGGCAACATCTCCAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: GTETGTEWGPVT*VERARQHLQRL
Trigger: GAGGCGCTGGAGATGTTGCCTGGCACGTTCTACCCAGGTGACAGGACCCCACTCTGTCCCTGTCTCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp GGAAACAGGCCAGTGGGCTCGTCCAAGTTGCAAGACTaGGCCCAGCCGATGGCAGGGCGATGGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: GNRPVGSSKLQD*AQPMAGRWERG
Trigger: TCCTCTCTCCCATCGCCCTGCCATCGGCTGGGCCCAGTCTTGCAACTTGGACGAGCCCACTGGCCTGTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645599.1
CDS CAA 72 bp TCCGGGCTTCTCGAGGGATGCCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGGGCGTCATCACGGCGA +
Preference number: 6 (lower is better)
Translates to: SGLLEGCPETGL*GSQEQWASSRR
Trigger: TCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGAAGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS CAA 90 bp TTCTTGTCATCGCCTTTCCGGTCTCGGCCCAGGTCGGTCTCGTACTaGTTCTCCGTCTCCTGCCGCCTCAGGGGTCCCCGGGTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: FLSSPFRSRPRSVSY*FSVSCRLRGPRVFC
Trigger: GCAGAACACCCGGGGACCCCTGAGGCGGCAGGAGACGGAGAACAAGTACGAGACCGACCTGGGCCGAGACCGGAAAGGCGATGACAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp CGGAGTAGTCGGAGAAGCTCTGGGCCATCTCGTCCTCGCTGGATGTaGGGCTGCGCGGCATGGCTGCCTGTGTCAGAGGTGTTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: RSSRRSSGPSRPRWM*GCAAWLPVSEVLGD
Trigger: GTCTCCCAACACCTCTGACACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCCGACTACTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CAA 90 bp GCCACCCTCGGTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCCTCGGGTTTATCCTTCTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: ATLGSTAMFSAAREG*EAGTISSGLSFFFR
Trigger: CCGGAAGAAGAAGGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409530.5
ENST00000412252.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp TTCCGCTTGGGCCCCGGGTACTCGAAGGCCGAGAGTGAGTCCTTGTaGGCACCAAGAGCAAAAGGCGACCCGACATGCCAGAGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: FRLGPGYSKAESESL*APRAKGDPTCQRGC
Trigger: GCAGCCTCTCTGGCATGTCGGGTCGCCTTTTGCTCTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS CAA 90 bp AGCTTCCGCTTGGGCCCCGGGTACTCGAAGGCCGAGAGTGAGTCCTaGTTGGCACCAAGAGCAAAAGGCGACCCGACATGCCAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SFRLGPGYSKAESES*LAPRAKGDPTCQRG
Trigger: GCCTCTCTGGCATGTCGGGTCGCCTTTTGCTCTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS CAA 90 bp AACTTTGACCCTGTCACCGCGGTGAAGGGGGATCTCGCCGTCCACTaGGGGTTGGTATGGCTTGACAGCGACGAAGAGCCTCCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: NFDPVTAVKGDLAVH*GLVWLDSDEEPPGH
Trigger: GTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGTCAAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CAA 90 bp CACCTGGAGGACAGGCCCCTCAGCCGCCTGGCAGCCTTAGGCTTTTaGGGTAAATGGACAAGAGCAGGGCAGGATCCTTCCCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: HLEDRPLSRLAALGF*GKWTRAGQDPSQVA
Trigger: GGCCACCTGGGAAGGATCCTGCCCTGCTCTTGTCCATTTACCCAAAAAGCCTAAGGCTGCCAGGCGGCTGAGGGGCCTGTCCTCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp CTTCCGCTTGGGCCCCGGGTACTCGAAGGCCGAGAGTaGGTCCTTGTTGGCACCAAGAGCAAAAGGCGACCC +
Preference number: 6 (lower is better)
Translates to: LPLGPRVLEGRE*VLVGTKSKRRP
Trigger: GGGTCGCCTTTTGCTCTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000425049.1
ENST00000460048.1
ENST00000468619.6
ENST00000601538.6
ENST00000656230.1
CDS GCA 72 bp TCCGCCTGGCGGGCTTGGCGGGGACGTAGACGGCTTTaGTGGCGATCTTCCCCACCTCTGAGTATGGGTTTT +
Preference number: 6 (lower is better)
Translates to: SAWRAWRGRRRL*WRSSPPLSMGF
Trigger: AAAACCCATACTCAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTCCCCGCCAAGCCCGCCAGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp GCCTCAATCAAGAAGTCCCCGGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCATCCACGGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: ASIKKSPVLSPA*HATPPSSTDSR
Trigger: CCTGGAGTCCGTGGATGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGACCGGGGACTTCTTGATTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS GCA 72 bp CATCACAAGGCAGGTCACCGAGTCAGGGCAGCTGGCTaGAGATCACCCAGGAAGGCGAGGGAGACGCCCAAA +
Preference number: 6 (lower is better)
Translates to: HHKAGHRVRAAG*RSPRKARETPK
Trigger: TTTGGGCGTCTCCCTCGCCTTCCTGGGTGATCTGCAGCCAGCTGCCCTGACTCGGTGACCTGCCTTGTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp CCTTCTCCCTCATCATGGTGGCCACGGTGTCGGACCTaGTGGCGGGGGACACCTTGGCGGCAGAATTCTGAT +
Preference number: 6 (lower is better)
Translates to: PSPSSWWPRCRT*WRGTPWRQNSD
Trigger: ATCAGAATTCTGCCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACCGTGGCCACCATGATGAGGGAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp TTGGCAGCGGTCCGCTCATTATATAACCTTCCTGGATaGGAGGAAGGACAGGCGTGCAGCCCGGCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: LAAVRSLYNLPG*EEGQACSPAPR
Trigger: CCGAGGGGCCGGGCTGCACGCCTGTCCTTCCTCCCATCCAGGAAGGTTATATAATGAGCGGACCGCTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468619.6
ENST00000656230.1
CDS CCA 72 bp AGTAGTCGGAGAAGCTCTGGGCCATCTCGTCCTCGCTaGATGTTGGGCTGCGCGGCATGGCTGCCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: SSRRSSGPSRPR*MLGCAAWLPVS
Trigger: TGACACAGGCAGCCATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCCGACTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp TCTCCTCCGTCCTGGCACCGCCCGGCTTCTCCGCAGTaGCCCGGATCGTGTCATAGATGGTCTCTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SPPSWHRPASPQ*PGSCHRWSLLW
Trigger: CCAAAGAAGAGACCATCTATGACACGATCCGGGCCACTGCGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp GGCTCCTCTCCCTCCTATGTGGTGGGTTACCCTGGGTaGAGGGGCTCTGGAGAGCATGAGGAGTGCACTGGT +
Preference number: 6 (lower is better)
Translates to: GSSPSYVVGYPG*RGSGEHEECTG
Trigger: ACCAGTGCACTCCTCATGCTCTCCAGAGCCCCTCCACCCAGGGTAACCCACCACATAGGAGGGAGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 72 bp GCATCGTACCTCGAGGGATGCCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGGGCGTCATCACGGCGA +
Preference number: 6 (lower is better)
Translates to: ASYLEGCPETGL*GSQEQWASSRR
Trigger: TCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000409530.5
ENST00000424924.5
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp CCTGTCACCGCGGTGAAGGGGGATCTCGCCGTCCACTaGGGGTTGGTATGGCTTGACAGCGACGAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: PVTAVKGDLAVH*GLVWLDSDEEP
Trigger: AGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCACCGCGGTGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS CAA 72 bp ACTGGAACCCCTGTAGCTACGCAGGGCACTCAGGGGTaGAGATCACCCGGAAACCCAGACAGCAGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: TGTPVATQGTQG*RSPGNPDSRAW
Trigger: CCACGCCCTGCTGTCTGGGTTTCCGGGTGATCTCAACCCCTGAGTGCCCTGCGTAGCTACAGGGGTTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 90 bp TCTGCCTTCGCATCGTACCTCGAGGGATGCCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGGGCGTCATCACGGCGATTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: SAFASYLEGCPETGL*GSQEQWASSRRFLG
Trigger: GCCAAGGAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000409530.5
ENST00000424924.5
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp CTCATGATCTCCGGGCTTCTCGAGGGATGCCCAGAAACGGGGCTTTaGGGCTCCCAGGAACAGTGGGCGTCATCACGGCGATTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: LMISGLLEGCPETGL*GSQEQWASSRRFLG
Trigger: GCCAAGGAATCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGAAGCCCGGAGATCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS CAA 90 bp GCCACCCTCGGTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTaGGAGGCCGGGACTATCTCCTCGGGTTTATCTTTATCCACGAGC +
Preference number: 6 (lower is better)
Translates to: ATLGSTAMFSAAREG*EAGTISSGLSLSTS
Trigger: GCTCGTGGATAAAGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS TCA 72 bp GGAGGGGCTCTGGAGAGCATGAGGAGTGCACTGGTGTaGCATCGTGACCGTGAATGGTGGTGGGCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: GGALESMRSALV*HRDREWWWAAV
Trigger: CACTGCAGCCCACCACCATTCACGGTCACGATGTCACACCAGTGCACTCCTCATGCTCTCCAGAGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp TCTCAAACCCGGCTACCTCTCGCGGCGCGCGTCATGTaGGCCGGGCTACTCTGCTTTTGTGCTCAGGGCATT +
Preference number: 6 (lower is better)
Translates to: SQTRLPLAARVM*AGLLCFCAQGI
Trigger: AATGCCCTGAGCACAAAAGCAGAGTAGCCCGGCTCACATGACGCGCGCCGCGAGAGGTAGCCGGGTTTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656230.1
CDS GCA 72 bp ACCTCAATCAAGAAGTCCCCGGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCATCCACGGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSIKKSPVLSPA*HATPPSSTDSR
Trigger: CCTGGAGTCCGTGGATGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGACCGGGGACTTCTTGATTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409161.5
ENST00000409530.5
ENST00000412252.5
ENST00000426687.2
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp AGGGACAGAGTGGGGTCCTGTCACCTGGGTAGAACGTaGCAGGCAACATCTCCAGCGCCTCAGCTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: RDRVGSCHLGRT*QATSPAPQLQQ
Trigger: CTGCTGAAGCTGAGGCGCTGGAGATGTTGCCTGGCACGTTCTACCCAGGTGACAGGACCCCACTCTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp CATCGTACCTCGAGGGATGCCCAGAAACGGGGCTTTTaGGCTCCCAGGAACAGTGGGCGTCATCACGGCGAT +
Preference number: 6 (lower is better)
Translates to: HRTSRDAQKRGF*APRNSGRHHGD
Trigger: ATCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCTCGAGGTACGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000409530.5
ENST00000424924.5
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GATCTCTGTGACGTCGCCCCACAACTTGGAGGTCCTTaGCTGGAGAACCTTGGCCATCCCAGGCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: DLCDVAPQLGGP*LENLGHPRLGT
Trigger: AGTGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGTCACAGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCTCGGGTTTATCGAGCT +
Preference number: 6 (lower is better)
Translates to: VPQPCSQQRGRA*RPGLSPRVYRA
Trigger: AGCTCGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424924.5
ENST00000449116.6
CDS CCA 72 bp AGGGGGAGAGCTGCAAACAGTAGAGATGCTGCCGTGTaGGGAGACTCCCTGGAGGGCAAGACTGAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: RGRAANSRDAAV*GDSLEGKTEAP
Trigger: AGGGGCTTCAGTCTTGCCCTCCAGGGAGTCTCCCCACACGGCAGCATCTCTACTGTTTGCAGCTCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp GAGAAGTCCAAGTCCTCACGCTTACCCACGTGGAGGTaGCCTTTCACACACCACTCCCTCACGGGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: EKSKSSRLPTWR*PFTHHSLTGSG
Trigger: GCCAGAGCCCGTGAGGGAGTGGTGTGTGAAAGGCCACCTCCACGTGGGTAAGCGTGAGGACTTGGACTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 72 bp TCCACCTCTGCCTTCTCGTCCTCTTCCTGCAGGGCGTaGTCCAGCTTAGTGGCGTCCACGGTGTGCACCATC +
Preference number: 6 (lower is better)
Translates to: STSAFSSSSCRA*SSLVASTVCTI
Trigger: GATGGTGCACACCGTGGACGCCACTAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAAGGCAGAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp GGCCCTACAGGTCCAGACTCCAGCTGTCTCCGAGGGTaGCAGGGACCCCCAAATGTGTCTGCAACCTGGAAG +
Preference number: 6 (lower is better)
Translates to: GPTGPDSSCLRG*QGPPNVSATWK
Trigger: CTTCCAGGTTGCAGACACATTTGGGGGTCCCTGCAACCCTCGGAGACAGCTGGAGTCTGGACCTGTAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS TCA 72 bp GCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTCTCGAGGG +
Preference number: 6 (lower is better)
Translates to: ANSEGDRRAPCT*DGAHDLRASRG
Trigger: CCCTCGAGAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357171.7
ENST00000412252.5
CDS TCA 72 bp GGTGGGTTACCCTGGGTGGAGGGGCTCTGGAGAGCATaGGGAGTGCACTGGTGTGACATCGTGACCGTGAAT +
Preference number: 6 (lower is better)
Translates to: GGLPWVEGLWRA*GVHWCDIVTVN
Trigger: ATTCACGGTCACGATGTCACACCAGTGCACTCCTCATGCTCTCCAGAGCCCCTCCACCCAGGGTAACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 72 bp ATCTCAATCAAGAAGTCCCCGGTCCTTAGTCCGGCTTaGCACGCCACCCCACCTTCATCCACGGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: ISIKKSPVLSPA*HATPPSSTDSR
Trigger: CCTGGAGTCCGTGGATGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGGACCGGGGACTTCTTGATTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470759.5
CDS GCA 72 bp GCCCTACAGGTCCAGACTCCAGCTGTCTCCGAGGGTTaGAGGGACCCCCAAATGTGTCTGCAACCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: ALQVQTPAVSEG*RDPQMCLQPGS
Trigger: ACTTCCAGGTTGCAGACACATTTGGGGGTCCCTGCAACCCTCGGAGACAGCTGGAGTCTGGACCTGTAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS CCA 72 bp GTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCTCGGGTTTATCCTTCT +
Preference number: 6 (lower is better)
Translates to: VPQPCSQQRGRA*RPGLSPRVYPS
Trigger: AGAAGGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409530.5
ENST00000412252.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CTCCCAGGAACAGTGGGCGTCATCACGGCGATTCCTTaGCGTTCGTACACAGAGTTCATGTCTGAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: LPGTVGVITAIP*RSYTEFMSEPA
Trigger: GGCGGGCTCAGACATGAACTCTGTGTACGAACGCCAAGGAATCGCCGTGATGACGCCCACTGTTCCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409161.5
ENST00000409530.5
ENST00000412252.5
ENST00000424924.5
ENST00000449116.6
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CCGGCTTCTCCGCAGTGGCCCGGATCGTGTCATAGATaGTCTCTTCTTTGGAGCTGTCTGACTCCGACCCCA +
Preference number: 6 (lower is better)
Translates to: PASPQWPGSCHR*SLLWSCLTPTP
Trigger: TGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACTGCGGAGAAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp ACCTTCCTGAGGCAGCACTGTCCAGCGCCCACCCAGTaGACAGTTTTGTTGCAGAAGGAGCTGGGGTACCCT +
Preference number: 6 (lower is better)
Translates to: TFLRQHCPAPTQ*TVLLQKELGYP
Trigger: AGGGTACCCCAGCTCCTTCTGCAACAAAACTGTCCACTGGGTGGGCGCTGGACAGTGCTGCCTCAGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp CTCAGCCGCCTGGCAGCCTTAGGCTTTTTGGGTAAATaGACAAGAGCAGGGCAGGATCCTTCCCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LSRLAALGFLGK*TRAGQDPSQVA
Trigger: GGCCACCTGGGAAGGATCCTGCCCTGCTCTTGTCCATTTACCCAAAAAGCCTAAGGCTGCCAGGCGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp GACTTGAGACAACACTTGGAGCGAGGCTGGCGGACTTaGCTCCCATTGGTGAATCCAGTCCTTCCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: DLRQHLERGWRT*LPLVNPVLPPA
Trigger: AGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGTGTTGTCTCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS CAA 72 bp GGCTTCTTGGAGCGAGGCTGGCGGACTTGGCTCCCATaGGTGAATCCAGTCCTTCCCCCGGCTTTGCCAATT +
Preference number: 6 (lower is better)
Translates to: GFLERGWRTWLP*VNPVLPPALPI
Trigger: AATTGGCAAAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp GACAGGCCCCTCAGCCGCCTGGCAGCCTTAGGCTTTTaGGGTAAATGGACAAGAGCAGGGCAGGATCCTTCC +
Preference number: 6 (lower is better)
Translates to: DRPLSRLAALGF*GKWTRAGQDPS
Trigger: GGAAGGATCCTGCCCTGCTCTTGTCCATTTACCCAAAAAGCCTAAGGCTGCCAGGCGGCTGAGGGGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 90 bp CCTGAGAGAATCGGGCTTTTGATCTCTGTGACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGAACCTTGGCCATCCCAGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: PERIGLLISVTSPHN*EVLGWRTLAIPGWA
Trigger: TGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp CTTTCAGTAACTGGAACCCCTGTAGCTACGCAGGGCACTCAGGGGTaGAGATCACCCGGAAACCCAGACAGCAGGGCGTGGCTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: LSVTGTPVATQGTQG*RSPGNPDSRAWLVW
Trigger: CCACACAAGCCACGCCCTGCTGTCTGGGTTTCCGGGTGATCTCAACCCCTGAGTGCCCTGCGTAGCTACAGGGGTTCCAGTTACTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp TCTTGGAGCGAGGCTGGCGGACTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGGCTTTGCCAATTTCTC +
Preference number: 6 (lower is better)
Translates to: SWSEAGGLGSHW*IQSFPRLCQFL
Trigger: GAGAAATTGGCAAAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp GCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: ANSEGDRRAPCT*DGAHDLRASWS
Trigger: GCTCCAAGAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp TCACCGATGCTCAGAACTTTGACCCTGTCACCGCGGTaGAGGGGGATCTCGCCGTCCACTTGGGGTTGGTAT +
Preference number: 6 (lower is better)
Translates to: SPMLRTLTLSPR*RGISPSTWGWY
Trigger: ATACCAACCCCAAGTGGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGTCAAAGTTCTGAGCATCGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000460048.1
ENST00000468619.6
ENST00000470759.5
ENST00000498519.5
ENST00000601538.6
ENST00000656230.1
CDS TCA 72 bp TGTGAGAGGCTCACTGGTAGGACACACGGGCCTTACTaGAAAGCAGAACGCGTGAGGAGCCCTGTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: CERLTGRTHGPY*KAERVRSPVFP
Trigger: GGGGAAGACAGGGCTCCTCACGCGTTCTGCTTTTCAGTAAGGCCCGTGTGTCCTACCAGTGAGCCTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp ACTTGGAGCGAGGCTGGCGGACTTGGCTCCCATTGGTaGATCCAGTCCTTCCCCCGGCTTTGCCAATTTCTC +
Preference number: 6 (lower is better)
Translates to: TWSEAGGLGSHW*IQSFPRLCQFL
Trigger: GAGAAATTGGCAAAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS GCA 72 bp CGGCTCTCTCTTCAAGACCTGGACTTGAGAGATGTCTaGTGGAGCCCTGGCTCTGTCAGATGCCAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RLSLQDLDLRDV*WSPGSVRCQLG
Trigger: CCCAAGCTGGCATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAGTCCAGGTCTTGAAGAGAGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 72 bp CCAGATGACTCCCACAGGCAGGAGGTCCCATCTCAGTaGCAGAGAAGTCCAAGTCCTCACGCTTACCCACGT +
Preference number: 6 (lower is better)
Translates to: PDDSHRQEVPSQ*QRSPSPHAYPR
Trigger: ACGTGGGTAAGCGTGAGGACTTGGACTTCTCTGGCACTGAGATGGGACCTCCTGCCTGTGGGAGTCATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp CACAGTCCCCAGTCCCCAGGCTCATTCGCAGAAGCATaGCTCCCACTGTCTGAACCGCAACATGGTTGCCAA +
Preference number: 6 (lower is better)
Translates to: HSPQSPGSFAEA*LPLSEPQHGCQ
Trigger: TTGGCAACCATGTTGCGGTTCAGACAGTGGGAGCCATGCTTCTGCGAATGAGCCTGGGGACTGGGGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 72 bp CGAGGGTTGCAGGGACCCCCAAATGTGTCTGCAACCTaGAAGTGTCGAAGCTGTCATAGGAGCCCACGGTGT +
Preference number: 6 (lower is better)
Translates to: RGLQGPPNVSAT*KCRSCHRSPRC
Trigger: ACACCGTGGGCTCCTATGACAGCTTCGACACTTCCAGGTTGCAGACACATTTGGGGGTCCCTGCAACCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468619.6
CDS CCA 72 bp CAGTGGCCCGGATCGTGTCATAGATGGTCTCTTCTTTaGAGCTGTCTGACTCCGACCCCACGGAGTAGTCGG +
Preference number: 6 (lower is better)
Translates to: QWPGSCHRWSLL*SCLTPTPRSSR
Trigger: CCGACTACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp TGCCCGTCTGCTGGGGGCCAGTTCATCGACTTGCACTaGGGCTGTCTTTGGAGCTCAATGGCTGACCAGTTA +
Preference number: 6 (lower is better)
Translates to: CPSAGGQFIDLH*GCLWSSMADQL
Trigger: TAACTGGTCAGCCATTGAGCTCCAAAGACAGCCCCAGTGCAAGTCGATGAACTGGCCCCCAGCAGACGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp AACTGTCTGTATTCTAGAGGGCCAAAGCAGGGTGCCTaGAGAGATTTCCAGACCTGGCTCGGCGAGTCGGGG +
Preference number: 6 (lower is better)
Translates to: NCLYSRGPKQGA*RDFQTWLGESG
Trigger: CCCCGACTCGCCGAGCCAGGTCTGGAAATCTCTCCAGGCACCCTGCTTTGGCCCTCTAGAATACAGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601538.6
CDS CCA 72 bp CACTGCTCCTCGGGGTCTCCACGGAGACTGAGTCCGTaGGGCGGCCTCATCTACTACTGCCTGTTAATTCAA +
Preference number: 6 (lower is better)
Translates to: HCSSGSPRRLSP*GGLIYYCLLIQ
Trigger: TTGAATTAACAGGCAGTAGTAGATGAGGCCGCCCCACGGACTCAGTCTCCGTGGAGACCCCGAGGAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS CAA 72 bp CAACACTTGGAGCGAGGCTGGCGGACTTGGCTCCCATaGGTGAATCCAGTCCTTCCCCCGGCTTTGCCAATT +
Preference number: 6 (lower is better)
Translates to: QHLERGWRTWLP*VNPVLPPALPI
Trigger: AATTGGCAAAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS CAA 90 bp GACTTGAGACAACACTTGGAGCGAGGCTGGCGGACTTGGCTCCCATaGGTGAATCCAGTCCTTCCCCCGGCTTTGCCAATTTCTCTCGGT +
Preference number: 6 (lower is better)
Translates to: DLRQHLERGWRTWLP*VNPVLPPALPISLG
Trigger: ACCGAGAGAAATTGGCAAAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAGTGTTGTCTCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654939.1
CDS TCA 72 bp TGTCCTCAGAGGTGTCCGGCATGGACAGGCTTCTGGTaGACTTCAGCATTGGAGGAGCCAGAAACTGCCGCT +
Preference number: 6 (lower is better)
Translates to: CPQRCPAWTGFW*TSALEEPETAA
Trigger: AGCGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCATGCCGGACACCTCTGAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp GAGTGTCTAGTGGCAGATCCACTGGCAGTGAACGAATaGTTTGCCATGCCAGGGTGGGGGAGGGGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: ECLVADPLAVNE*FAMPGWGRGRK
Trigger: CTTTCTCCCCCTCCCCCACCCTGGCATGGCAAATCATTCGTTCACTGCCAGTGGATCTGCCACTAGACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 72 bp CTGAGTATGGGTTTTCTGGCATCTGGCCTCTCTTGTTaGGGAAGTTGGCTTGCGGGCCGGCATTCCGACTGT +
Preference number: 6 (lower is better)
Translates to: LSMGFLASGLSC*GSWLAGRHSDC
Trigger: ACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GGTTTTCTGGCATCTGGCCTCTCTTGTTGCGGAAGTTaGCTTGCGGGCCGGCATTCCGACTGTAGAGGTCTT +
Preference number: 6 (lower is better)
Translates to: GFLASGLSCCGS*LAGRHSDCRGL
Trigger: AAGACCTCTACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp ATCTTCCCCACCTCTGAGTATGGGTTTTCTGGCATCTaGCCTCTCTTGTTGCGGAAGTTGGCTTGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: IFPTSEYGFSGI*PLLLRKLACGP
Trigger: CGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAGAGGTGGGGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp ACGGTGTGCACCATCAGCAGGCCAGCCGACTTCTGCTaGGACGTGTCCATGATGTCGATCAGCATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: TVCTISRPADFC*DVSMMSISMFF
Trigger: GAAGAACATGCTGATCGACATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACACCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GTTCCACAGCCATGTTCTCAGCAGCGCGGGAGGGCTTaGAGGCCGGGACTATCTCCTCGGGTTTATCTTTAT +
Preference number: 6 (lower is better)
Translates to: VPQPCSQQRGRA*RPGLSPRVYLY
Trigger: ATAAAGATAAACCCGAGGAGATAGTCCCGGCCTCCAAGCCCTCCCGCGCTGCTGAGAACATGGCTGTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409161.5
CDS CCA 72 bp GGGGGCCAGTTCATCGACTTGCACTGGGGCTGTCTTTaGAGCTCAATGGCTGACCAGTTAGAGCAGCACTTC +
Preference number: 6 (lower is better)
Translates to: GGQFIDLHWGCL*SSMADQLEQHF
Trigger: GAAGTGCTGCTCTAACTGGTCAGCCATTGAGCTCCAAAGACAGCCCCAGTGCAAGTCGATGAACTGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 72 bp TTCTGGCATCTGGCCTCTCTTGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACTGTAGAGGTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: FWHLASLVAEVG*RAGIPTVEVFR
Trigger: TCTGAAGACCTCTACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp TCTGAGTATGGGTTTTCTGGCATCTGGCCTCTCTTGTaGCGGAAGTTGGCTTGCGGGCCGGCATTCCGACTG +
Preference number: 6 (lower is better)
Translates to: SEYGFSGIWPLL*RKLACGPAFRL
Trigger: CAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp ACCTCTGAGTATGGGTTTTCTGGCATCTGGCCTCTCTaGTTGCGGAAGTTGGCTTGCGGGCCGGCATTCCGA +
Preference number: 6 (lower is better)
Translates to: TSEYGFSGIWPL*LRKLACGPAFR
Trigger: TCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp TGGGACGTGTCCATGATGTCGATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCTCGGCCCAGGTCGGTC +
Preference number: 6 (lower is better)
Translates to: WDVSMMSISMFF*SSPFRSRPRSV
Trigger: GACCGACCTGGGCCGAGACCGGAAAGGCGATGACAAGAAGAACATGCTGATCGACATCATGGACACGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp ACTGGCTGGCTTCTTGCTGTCTGCAGAGTTGGTTGGTaGGCTGGAGTTCAACGAAGGGGACTGAGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: TGWLLAVCRVGW*AGVQRRGLRGV
Trigger: GACACCCCTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp ATCGGGCTTTTGATCTCTGTGACGTCGCCCCACAACTaGGAGGTCCTTGGCTGGAGAACCTTGGCCATCCCA +
Preference number: 6 (lower is better)
Translates to: IGLLISVTSPHN*EVLGWRTLAIP
Trigger: TGGGATGGCCAAGGTTCTCCAGCCAAGGACCTCCAAGTTGTGGGGCGACGTCACAGAGATCAAAAGCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp GTATGGGTTTTCTGGCATCTGGCCTCTCTTGTTGCGGAAGTTGGCTaGCGGGCCGGCATTCCGACTGTAGAGGTCTTCAGAGTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: VWVFWHLASLVAEVG*RAGIPTVEVFRVQG
Trigger: TCCTTGGACTCTGAAGACCTCTACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAGAGAGGCCAGATGCCAGAAAACCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp GACTTCTGCTGGGACGTGTCCATGATGTCGATCAGCATGTTCTTCTaGTCATCGCCTTTCCGGTCTCGGCCCAGGTCGGTCTCGTACTTG +
Preference number: 6 (lower is better)
Translates to: DFCWDVSMMSISMFF*SSPFRSRPRSVSYL
Trigger: CAAGTACGAGACCGACCTGGGCCGAGACCGGAAAGGCGATGACAAGAAGAACATGCTGATCGACATCATGGACACGTCCCAGCAGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp AGCCCAGGGGCAACTTCTGTGGGGGAGTGCCACACTTCTTACCTATaGATTTCTGCCTTCGCATCGTACCTCGAGGGATGCCCAGAAACG +
Preference number: 6 (lower is better)
Translates to: SPGATSVGECHTSYL*ISAFASYLEGCPET
Trigger: CGTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGAAATCAATAGGTAAGAAGTGTGGCACTCCCCCACAGAAGTTGCCCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409530.5
ENST00000449116.6
CDS TCA 72 bp CCAGGTACTGTAGGGCTGGGAAAGCCGGTGTTGGTGTaGATTCTTCAATGGGTGTGTCAGCTTTGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: PGTVGLGKPVLV*ILQWVCQLWPL
Trigger: GAGGGGCCAAAGCTGACACACCCATTGAAGAATTCACACCAACACCGGCTTTCCCAGCCCTACAGTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000338508.8
ENST00000357171.7
ENST00000409161.5
ENST00000409530.5
ENST00000412252.5
ENST00000426687.2
ENST00000449116.6
ENST00000449833.6
ENST00000470759.5
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp CCATCCTACCACGGCTCTCTCTTCAAGACCTGGACTTaGGAGATGTCTGCTGGAGCCCTGGCTCTGTCAGAT +
Preference number: 6 (lower is better)
Translates to: PSYHGSLFKTWT*EMSAGALALSD
Trigger: ATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAGTCCAGGTCTTGAAGAGAGAGCCGTGGTAGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp GCGAACAGTGAAGGTGACCGTCGTGCTCCGTGTACCTaGGATGGTGCTCATGATCTCCGGGCTTCTGAAACA +
Preference number: 6 (lower is better)
Translates to: ANSEGDRRAPCT*DGAHDLRASET
Trigger: TGTTTCAGAAGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp CTGGCTTCTTGCTGTCTGCAGAGTTGGTTGGTTGGCTaGAGTTCAACGAAGGGGACTGAGGGGTGTCGCTTT +
Preference number: 6 (lower is better)
Translates to: LASCCLQSWLVG*SSTKGTEGCRF
Trigger: AAAGCGACACCCCTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GGGTTAAATCGAATGCATTTCGTCTGCTGCAGGTCATaGATGACCACGCGGATCACCAGCGTGTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GLNRMHFVCCRS*MTTRITSVLPW
Trigger: CCAGGGCAACACGCTGGTGATCCGCGTGGTCATCCATGACCTGCAGCAGACGAAATGCATTCGATTTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CCA 72 bp GTAAATGGACAAGAGCAGGGCAGGATCCTTCCCAGGTaGCCCCTTTCAGTAACTGGAACCCCTGTAGCTACG +
Preference number: 6 (lower is better)
Translates to: VNGQEQGRILPR*PLSVTGTPVAT
Trigger: CGTAGCTACAGGGGTTCCAGTTACTGAAAGGGGCCACCTGGGAAGGATCCTGCCCTGCTCTTGTCCATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 72 bp AAAGACTGGCTGGCTTCTTGCTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACGAAGGGGACTGAGGGG +
Preference number: 6 (lower is better)
Translates to: KDWLASCCLQSW*VGWSSTKGTEG
Trigger: CCCCTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp AGGCAGCACTGTCCAGCGCCCACCCAGTGGACAGTTTaGTTGCAGAAGGAGCTGGGGTACCCTGTGTTATTT +
Preference number: 6 (lower is better)
Translates to: RQHCPAPTQWTV*LQKELGYPVLF
Trigger: AAATAACACAGGGTACCCCAGCTCCTTCTGCAACAAAACTGTCCACTGGGTGGGCGCTGGACAGTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp GACGTAGACGGCTTTGCTGGCGATCTTCCCCACCTCTaGGTATGGGTTTTCTGGCATCTGGCCTCTCTTGTT +
Preference number: 6 (lower is better)
Translates to: DVDGFAGDLPHL*VWVFWHLASLV
Trigger: AACAAGAGAGGCCAGATGCCAGAAAACCCATACTCAGAGGTGGGGAAGATCGCCAGCAAAGCCGTCTACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp GGAGAATTGCTTGAGTCTAGGAAGTCAAGGCTGCAGTaGGCTGTGACTGCACCACTGCTCTCAGCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: GELLESRKSRLQ*AVTAPLLSAWA
Trigger: TGCCCAAGCTGAGAGCAGTGGTGCAGTCACAGCTCACTGCAGCCTTGACTTCCTAGACTCAAGCAATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482659.2
CDS TCA 72 bp GATCGTGTCATAGATGGTCTCTTCTTTGGAGCTGTCTaGCTCCGACCCCACGGAGTAGTCGGAGAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: DRVIDGLFFGAV*LRPHGVVGEAL
Trigger: CAGAGCTTCTCCGACTACTCCGTGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS TCA 72 bp TGGGTCTCTTGCCTTTTGGGCCCATTCACGTGGATATaGACGGCCCACCCACCGCTTCTGAAAAGATCCATC +
Preference number: 6 (lower is better)
Translates to: WVSCLLGPFTWI*TAHPPLLKRSI
Trigger: GATGGATCTTTTCAGAAGCGGTGGGTGGGCCGTTCATATCCACGTGAATGGGCCCAAAAGGCAAGAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CCA 72 bp TCTCAGCTTGGGCAACAGAGTGTGATCCAGAGGTGTTaGGAGACTGAGCCTCACAGATGGCCTCTTAGAGCA +
Preference number: 6 (lower is better)
Translates to: SQLGQQSVIQRC*ETEPHRWPLRA
Trigger: TGCTCTAAGAGGCCATCTGTGAGGCTCAGTCTCCCAACACCTCTGGATCACACTCTGTTGCCCAAGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482659.2
CDS CCA 72 bp TCAAGACCTGGACTTGAGAGATGTCTGCTGGAGCCCTaGCTCTGTCAGATGCCAGCTTGGGTGCACTTTTCT +
Preference number: 6 (lower is better)
Translates to: SRPGLERCLLEP*LCQMPAWVHFS
Trigger: AGAAAAGTGCACCCAAGCTGGCATCTGACAGAGCCAGGGCTCCAGCAGACATCTCTCAAGTCCAGGTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS CAA 72 bp GAGGCAGGCAGACAGTTTGAAAGACTGGCTGGCTTCTaGCTGTCTGCAGAGTTGGTTGGTTGGCTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: EAGRQFERLAGF*LSAELVGWLEF
Trigger: GAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp GACAGTTTGAAAGACTGGCTGGCTTCTTGCTGTCTGCAGAGTTGGTaGGTTGGCTGGAGTTCAACGAAGGGGACTGAGGGGTGTCGCTTT +
Preference number: 6 (lower is better)
Translates to: DSLKDWLASCCLQSW*VGWSSTKGTEGCRF
Trigger: AAAGCGACACCCCTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp CACTTACTGCCTAGTGACTGCCTACAGTTATCCACCTaGGACTCACAAGCACGCTGCGCTTTTGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: HLLPSDCLQLST*DSQARCAFAQQ
Trigger: CTGCTGTGCAAAAGCGCAGCGTGCTTGTGAGTCTCAGGTGGATAACTGTAGGCAGTCACTAGGCAGTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 72 bp CATTCACGTGGATATGAACGGCCCACCCACCGCTTCTaGAAAGATCCATCCTACCACGGCTCTCTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: HSRGYERPTHRF*KDPSYHGSLFK
Trigger: CTTGAAGAGAGAGCCGTGGTAGGATGGATCTTTTCAGAAGCGGTGGGTGGGCCGTTCATATCCACGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS TCA 72 bp CTCTGGGCCCTAGTGCATGTTTTGCTGTCCCCACACTaGAAGCCCATTCATCCTATTGTCCCTAGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: LWALVHVLLSPH*KPIHPIVPRKA
Trigger: GGCTTTCCTAGGGACAATAGGATGAATGGGCTTTCAGTGTGGGGACAGCAAAACATGCACTAGGGCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606715.3
CDS GCA 72 bp TGTGGGGGAGTGCCACACTTCTTACCTATTGATTTCTaGCTTCGCATCGTACCTCGAGGGATGCCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: CGGVPHFLPIDF*LRIVPRGMPRN
Trigger: GTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGAAATCAATAGGTAAGAAGTGTGGCACTCCCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409530.5
ENST00000449116.6
CDS CCA 72 bp CTGATTGAACGCAGGCTTAATCGTCCCGTAGACTCTTaGAGTTGGGGACTTGGGGCAGTTGTAAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: LIERRLNRPVDS*SWGLGAVVSGW
Trigger: CCAACCACTTACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGATTAAGCCTGCGTTCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp TTGAAAGACTGGCTGGCTTCTTGCTGTCTGCAGAGTTaGTTGGTTGGCTGGAGTTCAACGAAGGGGACTGAG +
Preference number: 6 (lower is better)
Translates to: LKDWLASCCLQS*LVGWSSTKGTE
Trigger: CTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCAGACAGCAAGAAGCCAGCCAGTCTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp GAGGATTGCTTGAGCCACGGAGGTCCATTCAGAAAATaGAAAGCTGAGTGGTCGATGAACCGGAACTGGGAG +
Preference number: 6 (lower is better)
Translates to: EDCLSHGGPFRK*KAEWSMNRNWE
Trigger: CTCCCAGTTCCGGTTCATCGACCACTCAGCTTTCCATTTTCTGAATGGACCTCCGTGGCTCAAGCAATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482659.2
CDS CAA 72 bp ATAACGTTTGCCTTTGGGCCTGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCCCACAACTTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: ITFAFGPERIGL*ISVTSPHNLEV
Trigger: GACCTCCAAGTTGTGGGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAACGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp GCCGGGGCCTCTCGGAAGGGCACAATGTCTGTTTCCTaGTGGTTCTTGATGTATTCTGCCAGCTCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: AGASRKGTMSVS*WFLMYSASSKL
Trigger: CAACTTTGAGCTGGCAGAATACATCAAGAACCACAAGGAAACAGACATTGTGCCCTTCCGAGAGGCCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460048.1
ENST00000601538.6
CDS CAA 90 bp AATTCACTAATAACGTTTGCCTTTGGGCCTGAGAGAATCGGGCTTTaGATCTCTGTGACGTCGCCCCACAACTTGGAGGTCCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: NSLITFAFGPERIGL*ISVTSPHNLEVLGW
Trigger: CCAGCCAAGGACCTCCAAGTTGTGGGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAACGTTATTAGTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp TGGCTTAGGAGGTACTGGGGGTTTGTCAACCATAAATaGTTGCCCATCTGCATAGACTGTGCAGGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: WLRRYWGFVNHK*LPICIDCAGVH
Trigger: GTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTACCTCCTAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp GTGTTTGAAAGCCCAGGGGCAACTTCTGTGGGGGAGTaGCACACTTCTTACCTATTGATTTCTGCCTTCGCA +
Preference number: 6 (lower is better)
Translates to: VFESPGATSVGE*HTSYLLISAFA
Trigger: TGCGAAGGCAGAAATCAATAGGTAAGAAGTGTGGCACTCCCCCACAGAAGTTGCCCCTGGGCTTTCAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409530.5
ENST00000449116.6
CDS GCA 72 bp CCAACCACGTGCCTGTGCCAGTCACATTGTCAAAGATaGAGGGCTCTTTCCACACATCAGACGAACTCAAAC +
Preference number: 6 (lower is better)
Translates to: PTTCLCQSHCQR*RALSTHQTNSN
Trigger: GTTTGAGTTCGTCTGATGTGTGGAAAGAGCCCTGCATCTTTGACAATGTGACTGGCACAGGCACGTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS CCA 72 bp GTCCTTCTGAAGTTTGCAGTCACAATTGACAAGATATaGGTGACATTGATCCTGCTCTGCTGCAGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: VLLKFAVTIDKI*VTLILLCCRPG
Trigger: CCCGGGCCTGCAGCAGAGCAGGATCAATGTCACCCATATCTTGTCAATTGTGACTGCAAACTTCAGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS CCA 72 bp GTGATCCAGAGGTGTTGGGAGACTGAGCCTCACAGATaGCCTCTTAGAGCAGGAACTGTCTGTATTCTAGAG +
Preference number: 6 (lower is better)
Translates to: VIQRCWETEPHR*PLRAGTVCILE
Trigger: CTCTAGAATACAGACAGTTCCTGCTCTAAGAGGCCATCTGTGAGGCTCAGTCTCCCAACACCTCTGGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482659.2
CDS CCA 72 bp CTGTGTCAGAGGTGTTGGGAGACTGAGCCTCACAGATaGCCTCTTAGAGCAGGAACTGTCTGTATTCTAGAG +
Preference number: 6 (lower is better)
Translates to: LCQRCWETEPHR*PLRAGTVCILE
Trigger: CTCTAGAATACAGACAGTTCCTGCTCTAAGAGGCCATCTGTGAGGCTCAGTCTCCCAACACCTCTGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CAA 72 bp TTCTCATCGAGACTGGCTTGTTTATACACCCGCTTCTaGTATCGAAACTCCAGGGAAGGAACGCCCGTCACG +
Preference number: 6 (lower is better)
Translates to: FSSRLACLYTRF*YRNSREGTPVT
Trigger: CGTGACGGGCGTTCCTTCCCTGGAGTTTCGATACAAGAAGCGGGTGTATAAACAAGCCAGTCTCGATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS CAA 90 bp AACACACAGTACATTATTTCATTTCGAGACCTGACCCAACCACCCTaGGAAGTACATCTGCTGAGCTCATACTCCAGGCCTGGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: NTQYIISFRDLTQPP*EVHLLSSYSRPGGG
Trigger: GCCACCACCAGGCCTGGAGTATGAGCTCAGCAGATGTACTTCCAAGGGTGGTTGGGTCAGGTCTCGAAATGAAATAATGTACTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 72 bp TGGGTGTACTTGTGGGTATTCACCTTAGAGGCTGAGTaGCTTCCGGTGATCCACAGCCTCAATCAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: WVYLWVFTLEAE*LPVIHSLNQEV
Trigger: GACTTCTTGATTGAGGCTGTGGATCACCGGAAGTCACTCAGCCTCTAAGGTGAATACCCACAAGTACACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS TCA 72 bp GATGTGGGTGTACTTGTGGGTATTCACCTTAGAGGCTaGGTGACTTCCGGTGATCCACAGCCTCAATCAAGA +
Preference number: 6 (lower is better)
Translates to: DVGVLVGIHLRG*VTSGDPQPQSR
Trigger: TCTTGATTGAGGCTGTGGATCACCGGAAGTCACTCAGCCTCTAAGGTGAATACCCACAAGTACACCCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445654.2
CDS GCA 72 bp TACTGGGGGTTTGTCAACCATAAATGCTTGCCCATCTaGATAGACTGTGCAGGTGTCCACATTCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: YWGFVNHKCLPI*IDCAGVHILST
Trigger: GGTGGAGAGAATGTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp GCAGAAAAATCCAACCACGTGCCTGTGCCAGTCACATaGTCAAAGATGCAGGGCTCTTTCCACACATCAGAC +
Preference number: 6 (lower is better)
Translates to: AEKSNHVPVPVT*SKMQGSFHTSD
Trigger: GTCTGATGTGTGGAAAGAGCCCTGCATCTTTGACAATGTGACTGGCACAGGCACGTGGTTGGATTTTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS CAA 90 bp CATTTTTGGCTTAGGAGGTACTGGGGGTTTGTCAACCATAAATGCTaGCCCATCTGCATAGACTGTGCAGGTGTCCACATTCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: HFWLRRYWGFVNHKC*PICIDCAGVHILST
Trigger: GGTGGAGAGAATGTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTACCTCCTAAGCCAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp CTTAGGAGGTACTGGGGGTTTGTCAACCATAAATGCTaGCCCATCTGCATAGACTGTGCAGGTGTCCACATT +
Preference number: 6 (lower is better)
Translates to: LRRYWGFVNHKC*PICIDCAGVHI
Trigger: AATGTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTACCTCCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp GGCATTGCAAAGATGGCTCGTTCAAAGTGTTCTCCATaGACCAGTCACTCTGAGTTGGCTGTCTGGCAATTC +
Preference number: 6 (lower is better)
Translates to: GIAKMARSKCSP*TSHSELAVWQF
Trigger: GAATTGCCAGACAGCCAACTCAGAGTGACTGGTCAATGGAGAACACTTTGAACGAGCCATCTTTGCAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS CAA 90 bp GTGGTTTCTGCAGAAAAATCCAACCACGTGCCTGTGCCAGTCACATaGTCAAAGATGCAGGGCTCTTTCCACACATCAGACGAACTCAAA +
Preference number: 6 (lower is better)
Translates to: VVSAEKSNHVPVPVT*SKMQGSFHTSDELK
Trigger: TTTGAGTTCGTCTGATGTGTGGAAAGAGCCCTGCATCTTTGACAATGTGACTGGCACAGGCACGTGGTTGGATTTTTCTGCAGAAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498519.5
CDS CAA 90 bp GGACATTTTGGCATTGCAAAGATGGCTCGTTCAAAGTGTTCTCCATaGACCAGTCACTCTGAGTTGGCTGTCTGGCAATTCTGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: GHFGIAKMARSKCSP*TSHSELAVWQFCSQ
Trigger: TTGGGAACAGAATTGCCAGACAGCCAACTCAGAGTGACTGGTCAATGGAGAACACTTTGAACGAGCCATCTTTGCAATGCCAAAATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 72 bp AGAGTTCAATTCACTAATAACGTTTGCCTTTGGGCCTaGGAGAATCGGGCTTTTGATCTCTGTGACGTCGCC +
Preference number: 6 (lower is better)
Translates to: RVQFTNNVCLWA*ENRAFDLCDVA
Trigger: GGCGACGTCACAGAGATCAAAAGCCCGATTCTCTCAGGCCCAAAGGCAAACGTTATTAGTGAATTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS TCA 72 bp TTATCTCACAAAGGGACTGTCTCAAAGGGTCAAGTGTaGCCTTGTCTCAAGGTCAAGTGTACCTTTGCCTGC +
Preference number: 6 (lower is better)
Translates to: LSHKGTVSKGQV*PCLKVKCTFAC
Trigger: GCAGGCAAAGGTACACTTGACCTTGAGACAAGGTCACACTTGACCCTTTGAGACAGTCCCTTTGTGAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 72 bp GCATTGCAAAGATGGCTCGTTCAAAGTGTTCTCCATTaGCCAGTCACTCTGAGTTGGCTGTCTGGCAATTCT +
Preference number: 6 (lower is better)
Translates to: ALQRWLVQSVLH*PVTLSWLSGNS
Trigger: AGAATTGCCAGACAGCCAACTCAGAGTGACTGGTCAATGGAGAACACTTTGAACGAGCCATCTTTGCAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS CCA 72 bp GTGAATGATGGGCTTCATTTTTGGCTTAGGAGGTACTaGGGGTTTGTCAACCATAAATGCTTGCCCATCTGC +
Preference number: 6 (lower is better)
Translates to: VNDGLHFWLRRY*GFVNHKCLPIC
Trigger: GCAGATGGGCAAGCATTTATGGTTGACAAACCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATCATTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp TACATTATTTCATTTCGAGACCTGACCCAACCACCCTaGGAAGTACATCTGCTGAGCTCATACTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: YIISFRDLTQPP*EVHLLSSYSRP
Trigger: AGGCCTGGAGTATGAGCTCAGCAGATGTACTTCCAAGGGTGGTTGGGTCAGGTCTCGAAATGAAATAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS CAA 72 bp CGTTCAAAGTGTTCTCCATTGACCAGTCACTCTGAGTaGGCTGTCTGGCAATTCTGTTCCCAAGGAGTACTA +
Preference number: 6 (lower is better)
Translates to: RSKCSPLTSHSE*AVWQFCSQGVL
Trigger: TAGTACTCCTTGGGAACAGAATTGCCAGACAGCCAACTCAGAGTGACTGGTCAATGGAGAACACTTTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS GCA 72 bp ATTCCTGATAGAAAGATTCTGCTGTCTATTGATTTCTaGCTTCGCATCGTACCTCGAGGGATGCCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: IPDRKILLSIDF*LRIVPRGMPRN
Trigger: GTTTCTGGGCATCCCTCGAGGTACGATGCGAAGGCAGAAATCAATAGACAGCAGAATCTTTCTATCAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp GCCGCTCTTCCTCTGTTATTCCTGATAGAAAGATTCTaGTGTCTATTGATTTCTGCCTTCGCATCGTACCTC +
Preference number: 6 (lower is better)
Translates to: AALPLLFLIERF*CLLISAFASYL
Trigger: GAGGTACGATGCGAAGGCAGAAATCAATAGACAGCAGAATCTTTCTATCAGGAATAACAGAGGAAGAGCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000656230.1
ENST00000659264.1
CDS GCA 72 bp CATCTCCAAACCAAATCCCAACACAGTTTCTCCACGTaGCTACTCACCAATGTCTGTTTCCTTGTGGTTCTT +
Preference number: 6 (lower is better)
Translates to: HLQTKSQHSFST*LLTNVCFLVVL
Trigger: AAGAACCACAAGGAAACAGACATTGGTGAGTAGGCACGTGGAGAAACTGTGTTGGGATTTGGTTTGGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618363.4
CDS CCA 72 bp AACTGTCTGTATTCTAGAGGGCCAAAGCAGGGTGCCTaGAGAGATTTCCAGACATTTCTCATCAGAAACTGT +
Preference number: 6 (lower is better)
Translates to: NCLYSRGPKQGA*RDFQTFLIRNC
Trigger: ACAGTTTCTGATGAGAAATGTCTGGAAATCTCTCCAGGCACCCTGCTTTGGCCCTCTAGAATACAGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608988.5
CDS CCA 72 bp CCATGCATTTCTTCAGATTGGTCTTCGTGTGGAGCTTaGCCAACTGTTTCTCATCGAGACTGGCTTGTTTAT +
Preference number: 6 (lower is better)
Translates to: PCISSDWSSCGA*PTVSHRDWLVY
Trigger: ATAAACAAGCCAGTCTCGATGAGAAACAGTTGGCCAAGCTCCACACGAAGACCAATCTGAAGAAATGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601538.6
ENST00000608988.5
CDS CAA 90 bp TTCTTGGTGAAGGCATTTAACAAAGACTTCATTTTCCCTCTGACTTaGGCAGCGGTCCGCTCATTATATAACCTTCCTGGATGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: FLVKAFNKDFIFPLT*AAVRSLYNLPGWEE
Trigger: TTCCTCCCATCCAGGAAGGTTATATAATGAGCGGACCGCTGCCAAAGTCAGAGGGAAAATGAAGTCTTTGTTAAATGCCTTCACCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468619.6
ENST00000656230.1
CDS TCA 72 bp CTCTCACAGGGCAAGGGCCTTAGCTTCTACCAGAATTaGCACAGTAAAGGCAATGCTGAATTATCTCACAAA +
Preference number: 6 (lower is better)
Translates to: LSQGKGLSFYQN*HSKGNAELSHK
Trigger: TTTGTGAGATAATTCAGCATTGCCTTTACTGTGTCAATTCTGGTAGAAGCTAAGGCCCTTGCCCTGTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS GCA 72 bp GTTGCCTGCTATTATGGCCACCTATATGTGATGCTATaGAAACTTCTGGACACTCCCTTAACTGCAGTGATT +
Preference number: 6 (lower is better)
Translates to: VACYYGHLYVML*KLLDTPLTAVI
Trigger: AATCACTGCAGTTAAGGGAGTGTCCAGAAGTTTGCATAGCATCACATATAGGTGGCCATAATAGCAGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460048.1
CDS CAA 72 bp GTCAAGTGTGACCTTGTCTCAAGGTCAAGTGTACCTTaGCCTGCAACAGGGTCAATAGGAATAATTGTGACA +
Preference number: 6 (lower is better)
Translates to: VKCDLVSRSSVP*PATGSIGIIVT
Trigger: TGTCACAATTATTCCTATTGACCCTGTTGCAGGCAAAGGTACACTTGACCTTGAGACAAGGTCACACTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 72 bp ATCTGTGCCAAGGGGGCTGAACATTTGTCTCCTCTGTaGGATAACTTTCTTCTAAGACACAGTTTCCTATGT +
Preference number: 6 (lower is better)
Translates to: ICAKGAEHLSPL*DNFLLRHSFLC
Trigger: ACATAGGAAACTGTGTCTTAGAAGAAAGTTATCTCACAGAGGAGACAAATGTTCAGCCCCCTTGGCACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470759.5
CDS GCA 72 bp CCTTCCCCCGGCTTTGCCAATTTCTCTCGGTTCATTTaGTGTAGGATAGAGTTCAATTCACTAATAACGTTT +
Preference number: 6 (lower is better)
Translates to: PSPGFANFSRFI*CRIEFNSLITF
Trigger: AAACGTTATTAGTGAATTGAACTCTATCCTACAGCAAATGAACCGAGAGAAATTGGCAAAGCCGGGGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 90 bp TCTCAAAGGGTCAAGTGTGACCTTGTCTCAAGGTCAAGTGTACCTTaGCCTGCAACAGGGTCAATAGGAATAATTGTGACATTAAGAAGA +
Preference number: 6 (lower is better)
Translates to: SQRVKCDLVSRSSVP*PATGSIGIIVTLRR
Trigger: TCTTCTTAATGTCACAATTATTCCTATTGACCCTGTTGCAGGCAAAGGTACACTTGACCTTGAGACAAGGTCACACTTGACCCTTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409530.5
CDS TCA 72 bp AAATTTGACTTCTGGGGACTGAACATCCAAATCAGCTaGAAATTCGCTTCTTTGACACAAGTTGTAAGCCCC +
Preference number: 6 (lower is better)
Translates to: KFDFWGLNIQIS*KFASLTQVVSP
Trigger: GGGGCTTACAACTTGTGTCAAAGAAGCGAATTTTCAGCTGATTTGGATGTTCAGTCCCCAGAAGTCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659264.1
CDS GCA 72 bp ATCTACATCTTCTTCCACGAGCGCGTCTTGATAAAGTaGATTGCTTTTGTGAATGATGGGCTTCATTTTTGG +
Preference number: 6 (lower is better)
Translates to: IYIFFHERVLIK*IAFVNDGLHFW
Trigger: CCAAAAATGAAGCCCATCATTCACAAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAAGAAGATGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CAA 72 bp AACAAAGCTATCTACATCTTCTTCCACGAGCGCGTCTaGATAAAGTGCATTGCTTTTGTGAATGATGGGCTT +
Preference number: 6 (lower is better)
Translates to: NKAIYIFFHERV*IKCIAFVNDGL
Trigger: AAGCCCATCATTCACAAAAGCAATGCACTTTATCAAGACGCGCTCGTGGAAGAAGATGTAGATAGCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338508.8
ENST00000409161.5
ENST00000424924.5
ENST00000449833.6
ENST00000601538.6
ENST00000654939.1
ENST00000656230.1
ENST00000659264.1
CDS CCA 72 bp CTGGAGAGATTTCCAGACATTTCTCATCAGAAACTGTaGAGACCAAAAGAAAGTGGCACAGTAATTTTCAAG +
Preference number: 6 (lower is better)
Translates to: LERFPDISHQKL*RPKESGTVIFK
Trigger: CTTGAAAATTACTGTGCCACTTTCTTTTGGTCTCCACAGTTTCTGATGAGAAATGTCTGGAAATCTCTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608988.5