RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3RF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000172985

Ensembl transcript IDs: ENST00000309415.8

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGTGTaGCGTGGAGCTTCCCAGGCGGCCTCCCCCTCTGTGAGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: GDDLEPLGRHGSLSV*RGASQAASPSVSWV
Trigger: CACCCAGCTCACAGAGGGGGAGGCCGCCTGGGAAGCTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp CACCCTGGGCCAGGGTATCCCCCGCCAGGTGCCTTGGAGATGACCTaGAACCCTTGGGGCGCCATGGCTCCCTCTCTGTGTGCCGTGGAG +
Preference number: 1 (lower is better)
Translates to: HPGPGYPPPGALEMT*NPWGAMAPSLCAVE
Trigger: CTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATACCCTGGCCCAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp CGCGGGAAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTaGCCCCCATGCCACCCACCTCGCCTGCAGACCTCCTGCAACCTC +
Preference number: 1 (lower is better)
Translates to: RGKPRAAQKDDLQRS*PPCHPPRLQTSCNL
Trigger: GAGGTTGCAGGAGGTCTGCAGGCGAGGTGGGTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTTCCCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp CGTGGCCGCCATCCTCTCTGCCTCCCTCTGGGCAGAGGCCCCTGGTaGCCTGCAGTCCTGTCCCCTCGGTGTCCACTGACTTCAGCCATG +
Preference number: 1 (lower is better)
Translates to: RGRHPLCLPLGRGPW*PAVLSPRCPLTSAM
Trigger: CATGGCTGAAGTCAGTGGACACCGAGGGGACAGGACTGCAGGCCACCAGGGGCCTCTGCCCAGAGGGAGGCAGAGAGGATGGCGGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp CCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATaGCACCCACCTCGCCTGCAGACCTCCTGCAACCTCCAACCCTGC +
Preference number: 1 (lower is better)
Translates to: PRAAQKDDLQRSWPP*HPPRLQTSCNLQPC
Trigger: GCAGGGTTGGAGGTTGCAGGAGGTCTGCAGGCGAGGTGGGTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp CCAGGGTATCCCCCGCCAGGTGCCTTGGAGATGACCTGGAACCCTTaGGGCGCCATGGCTCCCTCTCTGTGTGCCGTGGAGCTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: PGYPPPGALEMTWNP*GAMAPSLCAVELPR
Trigger: CCTGGGAAGCTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp CCTCAATGGATCCACCCCGCCAGCCCCCAGAGTACTGGCCAGCGCTaGGGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATAT +
Preference number: 1 (lower is better)
Translates to: PQWIHPASPQSTGQR*GAGWRLLGALPKPY
Trigger: ATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACCTCAGCGCTGGCCAGTACTCTGGGGGCTGGCGGGGTGGATCCATTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp GCATTTCCTCTGCTCTCAGGCAGCCCGGCATTGGCTCCAGAGCTCTaGCCAGACCCACGCATCGCTCTCCTTCCTAAGGTGGCACCAACG +
Preference number: 1 (lower is better)
Translates to: AFPLLSGSPALAPEL*PDPRIALLPKVAPT
Trigger: CGTTGGTGCCACCTTAGGAAGGAGAGCGATGCGTGGGTCTGGCCAGAGCTCTGGAGCCAATGCCGGGCTGCCTGAGAGCAGAGGAAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp GCAGAGGCCCCTGGTGGCCTGCAGTCCTGTCCCCTCGGTGTCCACTaGCTTCAGCCATGGCTGTGGACTCTACCATGCTCCTCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: AEAPGGLQSCPLGVH*LQPWLWTLPCSSKE
Trigger: TTCCTTTGAGGAGCATGGTAGAGTCCACAGCCATGGCTGAAGTCAGTGGACACCGAGGGGACAGGACTGCAGGCCACCAGGGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTaGTGCAACCCCCTGATCTCCTTGTACCTCTGGTCTCCAGCAGAT +
Preference number: 1 (lower is better)
Translates to: PLSPSQLPDLASLQR*CNPLISLYLWSPAD
Trigger: ATCTGCTGGAGACCAGAGGTACAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp TGCACATGGGCCATGCATTTCCTCTGCTCTCAGGCAGCCCGGCATTaGCTCCAGAGCTCTGGCCAGACCCACGCATCGCTCTCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: CTWAMHFLCSQAARH*LQSSGQTHASLSFL
Trigger: TAGGAAGGAGAGCGATGCGTGGGTCTGGCCAGAGCTCTGGAGCCAATGCCGGGCTGCCTGAGAGCAGAGGAAATGCATGGCCCATGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp CGCCTGCAGACCTCCTGCAACCTCCAACCCTGCTTAGGTGGTAAATaGGAACGCTGCCATGGCTGCAAACCACAGCCACAGGCCTGCCTG +
Preference number: 1 (lower is better)
Translates to: RLQTSCNLQPCLGGK*ERCHGCKPQPQACL
Trigger: CAGGCAGGCCTGTGGCTGTGGTTTGCAGCCATGGCAGCGTTCTCATTTACCACCTAAGCAGGGTTGGAGGTTGCAGGAGGTCTGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTaGAACCCCCTGATCTCCTTGTACCTCTGGTCTCCAGCAGATGAA +
Preference number: 1 (lower is better)
Translates to: LSPSQLPDLASLQRC*NPLISLYLWSPADE
Trigger: TTCATCTGCTGGAGACCAGAGGTACAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp AATGAGAACGCTGCCATGGCTGCAAACCACAGCCACAGGCCTGCCTaGGCCGGCACCTGCCTCTCTTCCTCAAGGTGCTTTCTTTGCAGT +
Preference number: 1 (lower is better)
Translates to: NENAAMAANHSHRPA*AGTCLSSSRCFLCS
Trigger: ACTGCAAAGAAAGCACCTTGAGGAAGAGAGGCAGGTGCCGGCGCAGGCAGGCCTGTGGCTGTGGTTTGCAGCCATGGCAGCGTTCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp CGCATCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTaGCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGATA +
Preference number: 1 (lower is better)
Translates to: RIALLPKVAPTPTRL*PESGQLTSSKDMEI
Trigger: TATCTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp ATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAAGCTaGACCTCCTCCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAG +
Preference number: 1 (lower is better)
Translates to: IYIHQPHSGRSQHQS*TSSSLALPTPRSCK
Trigger: CTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGGAGGAGGTGCAGCTTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp ATGCAAGGGACAATGGTGGTGAACAGAAAGTGTTGCTTATACTACTaGCAGGCGACAAGCCCACAGATTCTGCTCTGGTTCCCAACAGGG +
Preference number: 1 (lower is better)
Translates to: MQGTMVVNRKCCLYY*QATSPQILLWFPTG
Trigger: CCCTGTTGGGAACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACCACCATTGTCCCTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 90 bp GAGGGTGAAGCACATTTCTACCTGAAGCACCACGTGGGCCATGCCTaGGAGAGTAAGAACGTTCAGGTTACTCTATTCTGTTGCTTGGTA +
Preference number: 1 (lower is better)
Translates to: EGEAHFYLKHHVGHA*ESKNVQVTLFCCLV
Trigger: TACCAAGCAACAGAATAGAGTAACCTGAACGTTCTTACTCTCCCAGGCATGGCCCACGTGGTGCTTCAGGTAGAAATGTGCTTCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp ACTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTaGTCTGTGCACCTCTTTGGTGACAACGTGAATTTAAACACGCAC +
Preference number: 1 (lower is better)
Translates to: TWSGFPGEHLRHPGC*SVHLFGDNVNLNTH
Trigger: GTGCGTGTTTAAATTCACGTTGTCACCAAAGAGGTGCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp AACAAAATTGTCCCTGAAGGGCTCCTGATCAGTCTTCCTGGGAAGTaGGCCATGGTGCTAATGAATATACATTCATCAGCCCCACTCAGG +
Preference number: 1 (lower is better)
Translates to: NKIVPEGLLISLPGK*AMVLMNIHSSAPLR
Trigger: CCTGAGTGGGGCTGATGAATGTATATTCATTAGCACCATGGCTCACTTCCCAGGAAGACTGATCAGGAGCCCTTCAGGGACAATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp TTTGAGTCTATTAAATCTATTATCATCTTGGGGGAGGGAAAGGCATaGCCCCCGCCGTGTGGTGACCACCTGGAAGTAACAAGTAGCCAA +
Preference number: 1 (lower is better)
Translates to: FESIKSIIILGEGKA*PPPCGDHLEVTSSQ
Trigger: TTGGCTACTTGTTACTTCCAGGTGGTCACCACACGGCGGGGGTCATGCCTTTCCCTCCCCCAAGATGATAATAGATTTAATAGACTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp AGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCACCTCTTTGGTaGCAACGTGAATTTAAACACGCACAGGATTTTGGTGCAGGATGG +
Preference number: 1 (lower is better)
Translates to: RTPASSRLLICAPLW*QREFKHAQDFGAGW
Trigger: CCATCCTGCACCAAAATCCTGTGCGTGTTTAAATTCACGTTGTCACCAAAGAGGTGCACAGATCAACAACCTGGATGACGCAGGTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp CCTGCTCTTCTCTGCGAGCTACATCATCATGAAGGCTGCAGGGCCTaGACGAGTTTAAAATACTCAGAAATGCACATGGGCCATGCATTT +
Preference number: 1 (lower is better)
Translates to: PALLCELHHHEGCRA*TSLKYSEMHMGHAF
Trigger: AAATGCATGGCCCATGTGCATTTCTGAGTATTTTAAACTCGTTCAGGCCCTGCAGCCTTCATGATGATGTAGCTCGCAGAGAAGAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 90 bp AAGAAAGAAGTAATGCAAGGGACAATGGTGGTGAACAGAAAGTGTTaGTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGG +
Preference number: 1 (lower is better)
Translates to: KKEVMQGTMVVNRKC*LYYWQATSPQILLW
Trigger: CCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACCACCATTGTCCCTTGCATTACTTCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 90 bp GCATCATGGTTTGTCATCACTGACAAGTCTTCCAAAATCACACGCTaGCATTTGTGTCTAACAAAAACACTTGGGATAGGGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: ASWFVITDKSSKITR*HLCLTKTLGIGCVC
Trigger: ACACACACACCCTATCCCAAGTGTTTTTGTTAGACACAAATGTCAGCGTGTGATTTTGGAAGACTTGTCAGTGATGACAAACCATGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTCGGCCTCCCCCTCTGTaGGCTGGGTGCAGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSRPPPL*AGCREH
Trigger: GTGCTCCCTGCACCCAGCTCACAGAGGGGGAGGCCG...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp GCCAGGGTATCCCCCGCCAGGTGCCTTGGAGATGACCTGGAACCCTaGGGGCGCCATGGCTCCCTCTCTGTGTGCCGTGGAGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: ARVSPARCLGDDLEP*GRHGSLSVCRGASQ
Trigger: CTGGGAAGCTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATACCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCCTCTCTGTGTGCCGTaGAGCTTCCCAGGCGGCCTC +
Preference number: 2 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHPLCVP*SFPGGL
Trigger: GAGGCCGCCTGGGAAGCTCCACGGCACACAGAGAGG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGGTGACAGAGCAACCTaGGCCCCGCGGGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAGDRAT*APREAQ
Trigger: CTGGGCTTCCCGCGGGGCCCAGGTTGCTCTGTCACC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGGCAGCCCAGAAAGATaGTCTCCAGCGCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTGSPER*SPALLA
Trigger: GGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCGGCTGGGGTTGACCTaGGTGCTCCTTCTACCGCCA +
Preference number: 2 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNRLGLT*VLLLPP
Trigger: TGGCGGTAGAAGGAGCACGCAGGTCAACCCCAGCCG...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCCGCCTGCAGACCTCCTaGAACCTCCAACCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPRLQTS*NLQPCL
Trigger: TAAGCAGGGTTGGAGGTTGCAGGAGGTCTGCAGGCG...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGACCCTTGGGGCGCCATaGCTCCCTCTCTGTGTGCCG +
Preference number: 2 (lower is better)
Translates to: PTRLCPESGQLTSSKDMETLGAP*LPLCVP
Trigger: CGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGT...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGCCTTGGAGATGACCTaGAACCCTTGGGGCGCCATG +
Preference number: 2 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTALEMT*NPWGAM
Trigger: CATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACAGCCGGGCGGCAGGTaGCTGAGGTATATAGAATGG +
Preference number: 2 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTQPGGR*LRYIEW
Trigger: CCATTCTATATACCTCAGTCACCTGCCGCCCGGCTG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp ATGCACATGGGCCATGCATTTCCTCTGCTCTCAGGCAGCCCGGCATaGGCTCCAGAGCTCTGGCCAGACCCACGCATCGCTCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: MHMGHAFPLLSGSPA*APELWPDPRIALLP
Trigger: AGGAAGGAGAGCGATGCGTGGGTCTGGCCAGAGCTCTGGAGCCAATGCCGGGCTGCCTGAGAGCAGAGGAAATGCATGGCCCATGTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCACAGATTCTGCTCTaGTTCCCAACAGGGGCGGTG +
Preference number: 2 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPQILL*FPTGAV
Trigger: CACCGCCCCTGTTGGGAACCAGAGCAGAATCTGTGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp CATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCGTTTGGGGGTTTaGGGAGAAGGCACGACCTCCACAGTCCCTGGCCCCCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: HFLEEHPRCALRLGV*GEGTTSTVPGPHPG
Trigger: CCCAGGGTGGGGGCCAGGGACTGTGGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGAGAGCACACCTGGGATGTTCTTCAAGGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCAGAACATCCCAGGTGTaGTCTCCGTTTGGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPRTSQV*SPFGGF
Trigger: AAAACCCCCAAACGGAGAGCACACCTGGGATGTTCT...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATTGGTCTGGTTTCCCTaGAGAACACCTGCGTCATCC +
Preference number: 2 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTLVWFP*RTPASS
Trigger: GGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAA...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCACGTGGGCCATGCCTaGGAGAGTAAGAACGTTCAG +
Preference number: 2 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAHVGHA*ESKNVQ
Trigger: CTGAACGTTCTTACTCTCCCAGGCATGGCCCACGTG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCGGCTCCCTCTCTGTGTaGCGTGGAGCTTCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCGSLSV*RGASQA
Trigger: CGCCTGGGAAGCTCCACGGCACACAGAGAGGGAGCC...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCGCTCCTGGCCCCCATaGCACCCACCTCGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFRSWPP*HPPRLQ
Trigger: CTGCAGGCGAGGTGGGTGGCATGGGGGCCAGGAGCG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAAGTCTTCCTGGGAAGTaGGCCATGGTGCTAATGAAT +
Preference number: 2 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTSLPGK*AMVLMN
Trigger: ATTCATTAGCACCATGGCTCACTTCCCAGGAAGACT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAATCCCCCTCTGTGAGCTaGGTGCAGGGAGCACCAGTT +
Preference number: 2 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKSPSVS*VQGAPV
Trigger: AACTGGTGCTCCCTGCACCCAGCTCACAGAGGGGGA...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAATCTCCTTGTACCTCTaGTCTCCAGCAGATGAAGGT +
Preference number: 2 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTISLYL*SPADEG
Trigger: ACCTTCATCTGCTGGAGACCAGAGGTACAAGGAGAT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCCTGATCAGTCTTCCTaGGAAGTGAGCCATGGTGCT +
Preference number: 2 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEPDQSS*EVSHGA
Trigger: AGCACCATGGCTCACTTCCCAGGAAGACTGATCAGG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp CCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCCTGATCTCCTaGTACCTCTGGTCTCCAGCAGATGAAGGTTTGCACTGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: PDLASLQRCCNPLIS*YLWSPADEGLHCLK
Trigger: TTTCAGGCAGTGCAAACCTTCATCTGCTGGAGACCAGAGGTACAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp GAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTaGAAGTGCCCGGCCTGGCATCACCCCATGAGGATGCCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: ELCKVQRISQSAEPV*KCPAWHHPMRMPGE
Trigger: CTCTCCTGGCATCCTCATGGGGTGATGCCAGGCCGGGCACTTCAAAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAACACAAACACCCCTGCTaGGCAGCCGGGCGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: GANEYTFISPTQGGPSIKHKHPC*AAGRQV
Trigger: CACCTGCCGCCCGGCTGCTCAGCAGGGGTGTTTGTG...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCAAGGTTTGCACTGCCTaGAATGGGAGCAGTTATTTA +
Preference number: 2 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPKVCTA*NGSSYL
Trigger: TAAATAACTGCTCCCATTTCAGGCAGTGCAAACCTT...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGCCACCCACCTCGCCTaGAGACCTCCTGCAACCTCC +
Preference number: 2 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGATHLA*RPPATS
Trigger: GGAGGTTGCAGGAGGTCTGCAGGCGAGGTGGGTGGC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCCAGGAGAGCACCCGTaGCCGCCATCCTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFPGEHP*PPSSLP
Trigger: AGGCAGAGAGGATGGCGGCCACGGGTGCTCTCCTGG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATAGTACTGGCCAGCGCTaGGGTGCGGGATGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNSTGQR*GAGWRL
Trigger: AAGCCGCCATCCCGCACCTCAGCGCTGGCCAGTACT...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCACCCGACTCTGCCCTaGAAGCGGCCAGCTGACATC +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFHPTLP*KRPADI
Trigger: GATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCGTATCCCCCGCCAGGTaGCTTGGAGATGACCTGGAA +
Preference number: 2 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCVSPAR*LGDDLE
Trigger: TTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATAC...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAATCCGTTTGGGGGTTTTaGGAGAAGGCACGACCTCCA +
Preference number: 2 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKSVWGF*EKARPP
Trigger: TGGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGA...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTACCCCCGCCGTGTGGTaGCCACCTGGAAGTAACAAG +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFTPAVW*PPGSNK
Trigger: CTTGTTACTTCCAGGTGGTCACCACACGGCGGGGGT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCCAAGCCCACAGATTCTaGTCTGGTTCCCAACAGGGG +
Preference number: 2 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCQAHRF*SGSQQG
Trigger: CCCCTGTTGGGAACCAGAGCAGAATCTGTGGGCTTG...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTAGCCTGCAGCGGTGCTaGAACCCCCTGATCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFSLQRC*NPLISL
Trigger: CAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTATGACCTGGAACCCTTaGGGCGCCATGGCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFMTWNP*GAMAPS
Trigger: AGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCAT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGAATCTATTATCATCTTaGGGGAGGGAAAGGCATGAC +
Preference number: 2 (lower is better)
Translates to: SLSFLRWHQRPPDSALKANLLSS*GRERHD
Trigger: GTCATGCCTTTCCCTCCCCCAAGATGATAATAGATT...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCTCTATTCTGTTGCTTaGTACCTGCGCGCCTTAAAA +
Preference number: 2 (lower is better)
Translates to: PTRLCPESGQLTSSKDMELYSVA*YLRALK
Trigger: TTTTAAGGCGCGCAGGTACCAAGCAACAGAATAGAG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGAATTGCAGTTCTCTCTaGGGCAATAAAGGGAAGATT +
Preference number: 2 (lower is better)
Translates to: PTRLCPESGQLTSSKDMENCSSL*GNKGKI
Trigger: AATCTTCCCTTTATTGCCTCAGAGAGAACTGCAATT...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCGAGCTACATCATCATaGAGGCTGCAGGGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFRATSS*RLQGLN
Trigger: GTTCAGGCCCTGCAGCCTTCATGATGATGTAGCTCG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATGGGTGGGCATTTCCTTaGAGAACATCCCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNGWAFP*RTSQVC
Trigger: GCACACCTGGGATGTTCTTCAAGGAAATGCCCACCC...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATAGGTATATAGAATGGTaGCAGAGCAACCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNRYIEW*QSNLGP
Trigger: GGGGCCCAGGTTGCTCTGTCACCATTCTATATACCT...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTTTTAAAGAAACCGGCTaGTTCCAAGCTCCCTCCGAC +
Preference number: 2 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFFKETG*FQAPSD
Trigger: GTCGGAGGGAGCTTGGAAGCAGCCGGTTTCTTTAAA...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCAATTGGTTACATCCCTaGAAACCAATGACACCCTAT +
Preference number: 2 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCNWLHP*KPMTPY
Trigger: ATAGGGTGTCATTGGTTTTCAGGGATGTAACCAATT...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAATCAAGGTGCTTTCTTTaGAGTTTCCACAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: GANEYTFISPTQGGPSIKSRCFL*SFHRGG
Trigger: ACCCCCTCTGTGGAAACTGCAAAGAAAGCACCTTGA...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp AACATAAGGGTTAGTTTCATCTTAACCGCCAAACATGTGTACCCTTaGAGGCAAGATGGCCTGAAGAAAGGGCTAATTCTGCTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: NIRVSFILTAKHVYP*RQDGLKKGLILLLL
Trigger: GAGCAGGAGCAGAATTAGCCCTTTCTTCAGGCCATCTTGCCTCAAAGGGTACACATGTTTGGCGGTTAAGATGAAACTAACCCTTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGTGTTGCTTATACTACTaGCAGGCGACAAGCCCACAG +
Preference number: 2 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKCCLYY*QATSPQ
Trigger: CTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACA...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR TCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGGAACAAAATTGTCCCTaGAGGGCTCCTGATCAGTCT +
Preference number: 2 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKEQNCP*RAPDQS
Trigger: AGACTGATCAGGAGCCCTTCAGGGACAATTTTGTTC...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 90 bp GTGCACCTCTTTGGTGACAACGTGAATTTAAACACGCACAGGATTTaGGTGCAGGATGGGCAACTGATGAAGTTTGGCAATAATGGTAAA +
Preference number: 2 (lower is better)
Translates to: VHLFGDNVNLNTHRI*VQDGQLMKFGNNGK
Trigger: TTTACCATTATTGCCAAACTTCATCAGTTGCCCATCCTGCACCAAAATCCTGTGCGTGTTTAAATTCACGTTGTCACCAAAGAGGTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp ATCCACCCCGCCAGCCCCCAGAGTACTGGCCAGCGCTaGGGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: IHPASPQSTGQR*GAGWRLLGALP
Trigger: TGGGAGAGCGCCGAGAAGCCGCCATCCCGCACCTCAGCGCTGGCCAGTACTCTGGGGGCTGGCGGGGTGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 72 bp CTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGTGTaGCGTGGAGCTTCCCAGGCGGCCTCCCCCTCTGTG +
Preference number: 3 (lower is better)
Translates to: LEPLGRHGSLSV*RGASQAASPSV
Trigger: CACAGAGGGGGAGGCCGCCTGGGAAGCTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp ACCCTTGGGGCGCCATGGCTCCCTCTCTGTGTGCCGTaGAGCTTCCCAGGCGGCCTCCCCCTCTGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: TLGAPWLPLCVP*SFPGGLPLCEL
Trigger: CAGCTCACAGAGGGGGAGGCCGCCTGGGAAGCTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp CCCTCAATGGATCCACCCCGCCAGCCCCCAGAGTACTaGCCAGCGCTGAGGTGCGGGATGGCGGCTTCTCGG +
Preference number: 3 (lower is better)
Translates to: PSMDPPRQPPEY*PALRCGMAASR
Trigger: CCGAGAAGCCGCCATCCCGCACCTCAGCGCTGGCCAGTACTCTGGGGGCTGGCGGGGTGGATCCATTGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp CTGGGCCAGGGTATCCCCCGCCAGGTGCCTTGGAGATaGCCTGGAACCCTTGGGGCGCCATGGCTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: LGQGIPRQVPWR*PGTLGAPWLPL
Trigger: GAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATACCCTGGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp CCCCCGCCAGGTGCCTTGGAGATGACCTGGAACCCTTaGGGCGCCATGGCTCCCTCTCTGTGTGCCGTGGAG +
Preference number: 3 (lower is better)
Translates to: PPPGALEMTWNP*GAMAPSLCAVE
Trigger: CTCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCCCCCGCCAGGTGCCTaGGAGATGACCTGGAACCCT +
Preference number: 3 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHPPPGA*EMTWNP
Trigger: AGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp CCAGGGTATCCCCCGCCAGGTGCCTTGGAGATGACCTaGAACCCTTGGGGCGCCATGGCTCCCTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: PGYPPPGALEMT*NPWGAMAPSLC
Trigger: ACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATACCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCCAACTCCCCGATCTaGCAAGCCTGCAGCGGTGCT +
Preference number: 3 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPNSPI*QACSGA
Trigger: AGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCTCCGTTTGGGGGTTTaGGGAGAAGGCACGACCTCC +
Preference number: 3 (lower is better)
Translates to: PTRLCPESGQLTSSKDMELRLGV*GEGTTS
Trigger: GGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGAG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 72 bp CCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTaGTGCAACCCCCTGATCTCCTTGTACCTCTGGTCT +
Preference number: 3 (lower is better)
Translates to: PSQLPDLASLQR*CNPLISLYLWS
Trigger: AGACCAGAGGTACAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp AAGAACATCCCAGGTGTGCTCTCCGTTTGGGGGTTTTaGGAGAAGGCACGACCTCCACAGTCCCTGGCCCCC +
Preference number: 3 (lower is better)
Translates to: KNIPGVLSVWGF*EKARPPQSLAP
Trigger: GGGGGCCAGGGACTGTGGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGAGAGCACACCTGGGATGTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 72 bp CAAAGGATCTCCCAGTCGGCTGAGCCTGTTTTGAAGTaGCCGGCCTGGCATCACCCCATGAGGATGCCAGGA +
Preference number: 3 (lower is better)
Translates to: QRISQSAEPVLK*PAWHHPMRMPG
Trigger: TCCTGGCATCCTCATGGGGTGATGCCAGGCCGGGCACTTCAAAACAGGCTCAGCCGACTGGGAGATCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCGATGACCTGGAACCCTaGGGGCGCCATGGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALDDLEP*GRHGSL
Trigger: GAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATC...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCTGCGTCATCCAGGTaGTTGATCTGTGCACCTCTT +
Preference number: 3 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPASSR*LICAPL
Trigger: AAGAGGTGCACAGATCAACAACCTGGATGACGCAGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACGGTGAACAGAAAGTGTaGCTTATACTACTGGCAGGC +
Preference number: 3 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNGEQKV*LILLAG
Trigger: GCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACC...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGAAGTTACCTGGAGACTaGACTTGGTCTGGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAKLPGD*TWSGFP
Trigger: AGGGAAACCAGACCAAGTCAAGTCTCCAGGTAACTT...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACTCAAGGTGCTTTCTTaGCAGTTTCCACAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKLKVLS*QFPQRG
Trigger: CCCCCTCTGTGGAAACTGCAAAGAAAGCACCTTGAG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp TCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTaGAGAACATCCCAGGTGTGCTCTCCGTTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: SLQFPQRGWAFP*RTSQVCSPFGG
Trigger: ACCCCCAAACGGAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAAGGGGTGGGCATTTCCTaGAAGAACATCCCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: GANEYTFISPTQGGPSIKGVGIS*KNIPGV
Trigger: CACACCTGGGATGTTCTTCAAGGAAATGCCCACCCC...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGCCTTCCCGGCTGGGGTaGACCTGCGTGCTCCTTCTA +
Preference number: 3 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKPSRLG*TCVLLL
Trigger: TAGAAGGAGCACGCAGGTCAACCCCAGCCGGGAAGG...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp GGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTaGTCTGTGCACCTCTTTGGTGACAACGTGAATTTA +
Preference number: 3 (lower is better)
Translates to: GFPGEHLRHPGC*SVHLFGDNVNL
Trigger: TAAATTCACGTTGTCACCAAAGAGGTGCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp CTCTGCGAGCTACATCATCATGAAGGCTGCAGGGCCTaGACGAGTTTAAAATACTCAGAAATGCACATGGGC +
Preference number: 3 (lower is better)
Translates to: LCELHHHEGCRA*TSLKYSEMHMG
Trigger: GCCCATGTGCATTTCTGAGTATTTTAAACTCGTTCAGGCCCTGCAGCCTTCATGATGATGTAGCTCGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp TTCTGCTCCTGCTCTTCTCTGCGAGCTACATCATCATaGAGGCTGCAGGGCCTGAACGAGTTTAAAATACTC +
Preference number: 3 (lower is better)
Translates to: FCSCSSLRATSS*RLQGLNEFKIL
Trigger: GAGTATTTTAAACTCGTTCAGGCCCTGCAGCCTTCATGATGATGTAGCTCGCAGAGAAGAGCAGGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp ACAATGGTGGTGAACAGAAAGTGTTGCTTATACTACTaGCAGGCGACAAGCCCACAGATTCTGCTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: TMVVNRKCCLYY*QATSPQILLWF
Trigger: GAACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACCACCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CCA 72 bp AAAGTTACCTGGAGACTTGACTTGGTCTGGTTTCCCTaGAGAACACCTGCGTCATCCAGGTTGTTGATCTGT +
Preference number: 3 (lower is better)
Translates to: KVTWRLDLVWFP*RTPASSRLLIC
Trigger: ACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAGTCAAGTCTCCAGGTAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGAACCCCCTGATCTCCTaGTACCTCTGGTCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKNPLIS*YLWSPA
Trigger: TGCTGGAGACCAGAGGTACAAGGAGATCAGGGGGTT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCGTAAATAGAGAGCTTTaGGTTGTCATTAACCTGGCA +
Preference number: 3 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCVNREL*VVINLA
Trigger: TGCCAGGTTAATGACAACCAAAAGCTCTCTATTTAC...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTATAGAGAGCTTTTGGTaGTCATTAACCTGGCACACA +
Preference number: 3 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFIESFW*SLTWHT
Trigger: TGTGTGCCAGGTTAATGACAACCAAAAGCTCTCTAT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp AAAACACTTGGGATAGGGTGTGTGTGTTTGTGTGTGTaGACTGTGCAAAGTACAAAGGATCTCCCAGTCGGC +
Preference number: 3 (lower is better)
Translates to: KTLGIGCVCLCV*TVQSTKDLPVG
Trigger: GCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACACAAACACACACACCCTATCCCAAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR GCA 72 bp GTAATGCAAGGGACAATGGTGGTGAACAGAAAGTGTTaGTTATACTACTGGCAGGCGACAAGCCCACAGATT +
Preference number: 3 (lower is better)
Translates to: VMQGTMVVNRKC*LYYWQATSPQI
Trigger: AATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACCACCATTGTCCCTTGCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGAATAAAGGGAAGATTTaGCCTTCCCGGCTGGGGTTG +
Preference number: 3 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKNKGKI*PSRLGL
Trigger: CAACCCCAGCCGGGAAGGCAAAATCTTCCCTTTATT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR TCA 72 bp AGACTCAGAAACACAGGCATCATGGTTTGTCATCACTaGCAAGTCTTCCAAAATCACACGCTGACATTTGTG +
Preference number: 3 (lower is better)
Translates to: RLRNTGIMVCHH*QVFQNHTLTFV
Trigger: CACAAATGTCAGCGTGTGATTTTGGAAGACTTGTCAGTGATGACAAACCATGATGCCTGTGTTTCTGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGCGCGGGGCCGCTaGCGGATGCCGTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNPARGR*RMPSSS
Trigger: ACTGCTGGACGGCATCCGTCAGCGGCCCCGCGCGGG...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCACGCTCCGAGCAGCATaGGGGAGGCGCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPTLRAA*GRRPQR
Trigger: CCGCTGCGGGCGCCTCCCCCATGCTGCTCGGAGCGT...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGGCGCGAGCACACGATaGTCTCCAGGCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPGASTR*SPGSGG
Trigger: GCCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCGCC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGGGGGCTGGTGGCTGTaGTGCGGGGACACCACCGAG +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPGGWWL*CGDTTE
Trigger: CTCGGTGGTGTCCCCGCAGCACAGCCACCAGCCCCC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGGGGATGGCCGGCCGTaGGCACATCTGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSGDGRP*AHLHRG
Trigger: CCCCCGGTGCAGATGTGCCCACGGCCGGCCATCCCC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGGGGACCGGGGGTGCTaGCGGGCACGAAGCTCAACG +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHGDRGC*RARSST
Trigger: CGTTGAGCTTCGTGCCCGGCAGCACCCCCGGTCCCC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCCTGAGCGCAGCGCCTaGGGCTGCGGGCTACACCTG +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHPERSA*GCGLHL
Trigger: CAGGTGTAGCCCGCAGCCGCAGGCGCTGCGCTCAGG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACGGCGGCCGCCTTGGATaGGCACAGCCAGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNGGRLG*AQPGRS
Trigger: GGAGCGTCCTGGCTGTGCGCATCCAAGGCGGCCGCC...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCGCAGCCCACCAGGATaGGGCACTCGGGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHRSPPG*GTRGSA
Trigger: TGCGCTGCCCCGAGTGCCGCATCCTGGTGGGCTGCG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCAGCCAGCATCAGGACTaGGGAGCCGGGCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPSQHQD*GAGLRR
Trigger: ACGGCGGAGCCCGGCTCCCCAGTCCTGATGCTGGCT...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCGGCGCGGTCCTGCTaGTCGCCAGCTCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPARSC*SPAPAD
Trigger: GTCTGCGGGAGCTGGCGACCAGCAGGACCGCGCCGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGACTTGGGGCCACGCTaGCCACAGCGCCGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPDLGPR*PQRRSQ
Trigger: CTGACTCCGGCGCTGTGGCCAGCGTGGCCCCAAGTC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGGGGACACCACCGAGTaGGGCCTGAGGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPGDTTE*GLRLVA
Trigger: TGCCACCAGCCTCAGGCCCCACTCGGTGGTGTCCCC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGGGCCCACTGCACCTTaGAGCAGGGCGTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTGPTAP*SRASTA
Trigger: GGCCGTGGACGCCCTGCTCCAAGGTGCAGTGGGCCC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAAGCCGGGCTCCGCCGTaGCTTTCTTCACCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTSRAPP*LSSPRL
Trigger: CAGCCGGGGTGAAGAAAGTCACGGCGGAGCCCGGCT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGCGCCAGGTACACGTTaGGGGGCAGCTGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPAPGTR*GAAGPW
Trigger: CCAAGGTCCAGCTGCCCCTCAACGTGTACCTGGCGC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCTGGGTGCGCAGGGGTaGCACGGTGGCAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKALGAQG*HGGSWP
Trigger: CGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTCACAAACACCCCTGCTaGGCAGCCGGGCGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSHKHPC*AAGRQV
Trigger: CACCTGCCGCCCGGCTGCTCAGCAGGGGTGTTTGTG...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCCAGGCAGGGATTCTTTaGCGCCGGCGCGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPQAGIL*RRRGPA
Trigger: AGCAGGACCGCGCCGGCGGCAAAGAATCCCTGCCTG...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCGGGAAGAGGCCTGTaGGGCCGTTCCGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPGRGL*GRSAAG
Trigger: CCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACTGTGGCGGTGCGAAGTaGCTCACCGACCGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNCGGAK*LTDRPA
Trigger: CGCAGGCCGGTCGGTGAGCCACTTCGCACCGCCACA...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGGGCAGCGCAGCTCGTaGCGCGAGCACACGATGCTC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTGQRSS*REHTML
Trigger: GAGCATCGTGTGCTCGCGCCACGAGCTGCGCTGCCC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGGTGGGGGCCGCACTCTaGCCTGGGATGGGACGCGCG +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEVGAAL*PGMGRA
Trigger: CGCGCGTCCCATCCCAGGCCAGAGTGCGGCCCCCAC...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACGGGGCAGCTGGACCTTaGGAGGCGTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNGAAGP*EACPAL
Trigger: GAGAGCAGGGCACGCCTCCCAAGGTCCAGCTGCCCC...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGCGTCCACGGCCACCTaGGGGTCGTGGGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHASTAT*GSWVGD
Trigger: GTCTCCAACCCACGACCCCCAGGTGGCCGTGGACGC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGGTGACAGAGCAACCTaGGCCCCGCGGGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHGDRAT*APREAQ
Trigger: CTGGGCTTCCCGCGGGGCCCAGGTTGCTCTGTCACC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCAGCCCCCAGAGTACTaGCCAGCGCTGAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHQPPEY*PALRCG
Trigger: CCCGCACCTCAGCGCTGGCCAGTACTCTGGGGGCTG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACTCTCTGCCTCCCTCTaGGCAGAGGCCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTLSASL*AEAPGG
Trigger: GCCACCAGGGGCCTCTGCCCAGAGGGAGGCAGAGAG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp TCCCCCGCCAGGTGCCTTGGAGATGACCTGGAACCCTaGGGGCGCCATGGCTCCCTCTCTGTGTGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: SPARCLGDDLEP*GRHGSLSVCRG
Trigger: TCCACGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCCATCCACACGCCGCTaGAAGGCACTGACCGCCCCT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHPSTRR*KALTAP
Trigger: AGGGGCGGTCAGTGCCTTTCAGCGGCGTGTGGATGG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGGGGAGGGAAAGGCATaGCCCCCGCCGTGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAGEGKA*PPPCGD
Trigger: GTCACCACACGGCGGGGGTCATGCCTTTCCCTCCCC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGGGGCCGCTGACGGATaGCGTCCAGCAGTCGCACCA +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAGAADG*RPAVAP
Trigger: TGGTGCGACTGCTGGACGGCATCCGTCAGCGGCCCC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGGACCTTGGGAGGCGTaGCCTGCTCTCCAGACACCG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTGPWEA*PALQTP
Trigger: CGGTGTCTGGAGAGCAGGGCACGCCTCCCAAGGTCC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGGCTCCCTCTCTGTGTaGCGTGGAGCTTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSGSLSV*RGASQA
Trigger: CGCCTGGGAAGCTCCACGGCACACAGAGAGGGAGCC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACGCCTGCGCCGGCACCTaGCTCTCTTCCTCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNACAGT*LSSSRC
Trigger: GCACCTTGAGGAAGAGAGGCAGGTGCCGGCGCAGGC...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGGGAGGCATTGCAGCTaGATGCAGCGGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPGRHCS*MQRLGM
Trigger: CATGCCCAGCCGCTGCATCCAGCTGCAATGCCTCCC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTATGGTGCTCCGGGCTTaGCTGGCCGTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSMVLRA*LAVGWA
Trigger: AGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCAT...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGCAGGGGTGACACGGTaGCAGTTGGCCGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTAGVTR*QLAGPE
Trigger: CTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGCCACCTGGGGGTCGTaGGTTGGAGACACAGATGGC +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPATWGS*VGDTDG
Trigger: GCCATCTGTGTCTCCAACCCACGACCCCCAGGTGGC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGATCTCCAGCGCTCCTaGCCCCCATGCCACCCACCT +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSDLQRS*PPCHPP
Trigger: AGGTGGGTGGCATGGGGGCCAGGAGCGCTGGAGATC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCGTGGATGGACAGTaGGGACACTTCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAAVDGQ*GHFGAH
Trigger: GTGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGGCAGCCCAGAAAGATaGTCTCCAGCGCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHGSPER*SPALLA
Trigger: GGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACACCCGACTCTGCCCTaGAAGCGGCCAGCTGACATC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTHPTLP*KRPADI
Trigger: GATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACCCCTCGGTGTCCACTaGCTTCAGCCATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTPLGVH*LQPWLW
Trigger: CCACAGCCATGGCTGAAGTCAGTGGACACCGAGGGG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAAAGCCCTGTGTGCCGTaGAGCTCGCCGTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTKPCVP*SSPWYH
Trigger: GTGGTACCACGGCGAGCTGCACGGCACACAGGGCTT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACTATGGGGCAGGACCCTaGCCTGCCGTGGATGGACAG +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNYGAGP*PAVDGQ
Trigger: CTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATA...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGCAAGCCTGCAGCGGTaGTGCAACCCCCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSASLQR*CNPLIS
Trigger: GGAGATCAGGGGGTTGCAGCACCGCTGCAGGCTTGC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACCGATCTTGCAAGCCTaGAGCGGTGCTGCAACCCCC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTPILQA*SGAATP
Trigger: GGGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGACGCCCACCCGACTCTaGCCTGAAAGCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKATPTRL*PESGQL
Trigger: CAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGT...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTCCGATGCTAGGGCTGTaGCGGTGCGAAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSPMLGL*RCEVAH
Trigger: GTGAGCCACTTCGCACCGCCACAGCCCTAGCATCGG...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCTGGGCAGAGGCCCCTaGTGGCCTGCAGTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMELGRGP*WPAVLS
Trigger: GGACAGGACTGCAGGCCACCAGGGGCCTCTGCCCAG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCTTCCCGGCTGGGGTTaGCCTGCGTGCTCCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKALPGWG*PACSFY
Trigger: GTAGAAGGAGCACGCAGGTCAACCCCAGCCGGGAAG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAACCCCCGCCGTGTGGTaGCCACCTGGAAGTAACAAG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTTPAVW*PPGSNK
Trigger: CTTGTTACTTCCAGGTGGTCACCACACGGCGGGGGT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACAGCCTGCAGCGGTGCTaGAACCCCCTGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHSLQRC*NPLISL
Trigger: CAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCT...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTCTGTGGCTGGCAGCCTaGGAGGATCTGTGCGTCACA +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSLWLAA*EDLCVT
Trigger: TGTGACGCACAGATCCTCCCAGGCTGCCAGCCACAG...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTGGCTGGCCGTTGGCTaGGCTGAGTGCCGTAGACAG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAWLAVG*AECRRQ
Trigger: CTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGACCCTGCCCTGCCGTaGATGGACAGTGAGGACACT +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTDPALP*MDSEDT
Trigger: AGTGTCCTCACTGTCCATCCACGGCAGGGCAGGGTC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGAGGCTCCATCCCCATaGCACCCTGCATCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHEAPSP*HPASRS
Trigger: AGAGCGAGATGCAGGGTGCCATGGGGATGGAGCCTC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCGCCTCACTCTGGGGTaGGTACGAGACCACCACGCG +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMERLTLG*VRDHHA
Trigger: CGCGTGGTGGTCTCGTACCCACCCCAGAGTGAGGCG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTATGACCTGGAACCCTTaGGGCGCCATGGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSMTWNP*GAMAPS
Trigger: AGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCAT...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACGGCCTCCCCCTCTGTaGGCTGGGTGCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKRPPPL*AGCREH
Trigger: GTGCTCCCTGCACCCAGCTCACAGAGGGGGAGGCCG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGTGGCAAGGGCTGGATaGACTGGATATAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPVARAG*TGYSWL
Trigger: CAGCCAGCTATATCCAGTGCATCCAGCCCTTGCCAC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGATGGAGAGTTCTGGGTaGGCAGGGGTGACACGGTGG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAMESSG*AGVTRW
Trigger: CCACCGTGTCACCCCTGCGCACCCAGAACTCTCCAT...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGAGCTCTCGACGAAGCTaGCCGGGAAGAGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMESSRRS*PGRGLC
Trigger: GCACAGGCCTCTTCCCGGGCAGCTTCGTCGAGAGCT...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCAACTCCCCGATCTTaGAAGCCTGCAGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPTPRS*KPAAVL
Trigger: CAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCTGAGCTGCTTAAAGTaGGACTTGGGGCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNLSCLK*DLGPRW
Trigger: CCAGCGTGGCCCCAAGTCCCACTTTAAGCAGCTCAG...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACAGGAGACATCCTGGGTaGGAGCAGCGCACGACAGAT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHRRHPG*EQRTTD
Trigger: ATCTGTCGTGCGCTGCTCCCACCCAGGATGTCTCCT...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCTGGGGGTCGTGGGTTaGAGACACAGATGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMELGVVG*RHRWRG
Trigger: TCCCCGCCATCTGTGTCTCCAACCCACGACCCCCAG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGAGCCCGCCCAGTCCTaGGCGCAGCGCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGEPAQS*AQRLRL
Trigger: CAGCCGCAGGCGCTGCGCTCAGGACTGGGCGGGCTC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGAGAGTGGGCAGCTGTTaGAATGGTGCTCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKARVGSC*NGAPGL
Trigger: CAAGCCCGGAGCACCATTTCAACAGCTGCCCACTCT...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCCCCCACCAGGAGGGTaGAGCACATTTCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHPPPGG*STFLPE
Trigger: TTCAGGTAGAAATGTGCTTCACCCTCCTGGTGGGGG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACTGAAAGCGGCCAGCTaGCATCCTCCAAAGACATGG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTLKAAS*HPPKTW
Trigger: CCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCGAGCTACATCATCATaGAGGCTGCAGGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHRATSS*RLQGLN
Trigger: GTTCAGGCCCTGCAGCCTTCATGATGATGTAGCTCG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCTCCCACTGCCTGGGTaGATGGTTGTGGTTATCCCT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHLPLPG*MVVVIP
Trigger: AGGGATAACCACAACCATGCACCCAGGCAGTGGGAG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGTTGGCTGGGCTGAGTaGCGTAGACAGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAVGWAE*RRQLPV
Trigger: AACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAAC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCGCTCCTGGCCCCCATaGCACCCACCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALRSWPP*HPPRLQ
Trigger: CTGCAGGCGAGGTGGGTGGCATGGGGGCCAGGAGCG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCAGCGGCGGCCGCCTTaGATGCGCACAGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALQRRPP*MRTART
Trigger: CGTCCTGGCTGTGCGCATCCAAGGCGGCCGCCGCTG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGAAAGTGTGTTGGCATaGCAGCACCTTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTESVLA*QHLGRG
Trigger: ACCACGGCCAAGGTGCTGCCATGCCAACACACTTTC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACTCCGTTTGGGGGTTTTaGGAGAAGGCACGACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNSVWGF*EKARPP
Trigger: TGGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGA...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp GAAGAACATCCCAGGTGTGCTCTCCGTTTGGGGGTTTaGGGAGAAGGCACGACCTCCACAGTCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EEHPRCALRLGV*GEGTTSTVPGP
Trigger: GGGGCCAGGGACTGTGGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGAGAGCACACCTGGGATGTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAAAGCACATTTCTACCTaGAGCACCACGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTKHIST*STTWAM
Trigger: CATGGCCCACGTGGTGCTTCAGGTAGAAATGTGCTT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCGCAGCGCCTGCGGCTaGGGGCTACACCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGRSACG*GLHLSR
Trigger: GCGGGACAGGTGTAGCCCGCAGCCGCAGGCGCTGCG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCTAATTTCCATGGAATaGCTGTGGCTGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNLISME*LWLAAW
Trigger: CCAGGCTGCCAGCCACAGGCATTCCATGGAAATTAG...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACTACATCTCTCCCTTGTaGAGCTCCAGCTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHYISPL*SSSSSL
Trigger: GAGTGACGAGCTGGAGCTGCACAAGGGAGAGATGTA...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGGCAGGACCCTGCCCTaGCGTGGATGGACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKGRTLP*RGWTVR
Trigger: CCTCACTGTCCATCCACGGCAGGGCAGGGTCCTGCC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCTCTACCATGCTGCATaGAGTGGGCTGTGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMELYHAA*SGLCPR
Trigger: GCGAGGACACAGCCCACTGCATGCAGCATGGTAGAG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCCGCCGTCGCTCGCCTaGCCTGTCCTCGTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGPPSLA*PVLVAL
Trigger: GAGGGCGACGAGGACAGGCCAGGCGAGCGACGGCGG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCACTCTGGCCTGGGATaGGACGCGCGGGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGHSGLG*DARAGC
Trigger: GCAGCCCGCCCGCGCGTCCCATCCCAGGCCAGAGTG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACAAGGTCTCCAATCCTaGCCGCGGCTCGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKQGLQS*PRLGDR
Trigger: GCGATCCCCGAGCCGCGGCCAGGATTGGAGACCTTG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACAGACTCCCACTGCCTaGGTGCATGGTTGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTQTPTA*VHGCGY
Trigger: ATAACCACAACCATGCACCCAGGCAGTGGGAGTCTG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAATGCTCCGGGCTTGGCTaGCCGTTGGCTGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKCSGLG*PLAGLS
Trigger: ACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCA...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGGCCTGGGCTGCAGAGTaGGCAGCTGTTGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEAWAAE*AAVEMV
Trigger: CACCATTTCAACAGCTGCCCACTCTGCAGCCCAGGC...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCTGGGCTCGGGGCGGATaGCAGCCATGGACAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCWARGG*QPWTAE
Trigger: CTCCGCTGTCCATGGCTGCCATCCGCCCCGAGCCCA...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCTCCGACCCCCTCAATaGATCCACCCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALLRPPQ*IHPASP
Trigger: GGGGCTGGCGGGGTGGATCCATTGAGGGGGTCGGAG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACCAGGAGAGCACCCGTaGCCGCCATCCTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKPGEHP*PPSSLP
Trigger: AGGCAGAGAGGATGGCGGCCACGGGTGCTCTCCTGG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGAATCTCGTCCTTGGTaGAGGTCAGACAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHESRPW*RSDSPC
Trigger: ACAAGGACTGTCTGACCTTCACCAAGGACGAGATTC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTCTCATCCACTCTCCTaGGCACCGTCAGAATCTCGT +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKASHPLS*APSESR
Trigger: ACGAGATTCTGACGGTGCTCAGGAGAGTGGATGAGA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCTTGTCCATCTCAATaGGCTGCTTGGCGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAACPSQ*AAWRSH
Trigger: ATGACTCCGCCAAGCAGCTCATTGAGATGGACAAGC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGCCGCTGAAAGGCACTaGCCGCCCCTGAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKAAERH*PPLSCL
Trigger: TAAGCAGCTCAGGGGCGGTCAGTGCCTTTCAGCGGC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACAGGTGCCTTGGAGATaGCCTGGAACCCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKQVPWR*PGTLGA
Trigger: CGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCGTCATCCAGGTTGTTaGTCTGTGCACCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHRHPGC*SVHLFG
Trigger: ACCAAAGAGGTGCACAGATCAACAACCTGGATGACG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTAGTTACCTGGAGACTTaGCTTGGTCTGGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSSYLET*LGLVSL
Trigger: CAGGGAAACCAGACCAAGTCAAGTCTCCAGGTAACT...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAAGCGGGGGACCGGGGGTaGTGCCGGGCACGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKAGDRG*CRARSS
Trigger: TGAGCTTCGTGCCCGGCAGCACCCCCGGTCCCCCGC...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCGGAGGAAGCCCTGTGTaGCGTGCAGCTCGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALGGSPV*RAARRG
Trigger: ACCACGGCGAGCTGCACGGCACACAGGGCTTCCTCC...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAAGGGCAGGGAGGCATTaGAGCTGGATGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKRAGRH*SWMQRL
Trigger: CAGCCGCTGCATCCAGCTGCAATGCCTCCCTGCCCT...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGCCTGGGAGGATCTGTaGGTCACACTGAGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKAWEDL*VTLSAV
Trigger: CACCGCGCTCAGTGTGACGCACAGATCCTCCCAGGC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCACTTCGGGGCCCACTaGACCTTGGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALHFGAH*TLEQGV
Trigger: GACGCCCTGCTCCAAGGTGCAGTGGGCCCCGAAGTG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCCTGGAGAACACCTaGGTCATCCAGGTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTSLENT*VIQVVD
Trigger: ATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGA...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTGCAGGGCGGGCCTGGTaGCAGTGGCCAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFAGRAW*QWPGCS
Trigger: TGAGCAGCCTGGCCACTGCCACCAGGCCCGCCCTGC...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACGGGATGGAGAGTTCTaGGTGCGCAGGGGTGACACG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKRDGEF*VRRGDT
Trigger: CGTGTCACCCCTGCGCACCCAGAACTCTCCATCCCG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACAGCGTGACTTCTTCTTaGTGGATGCTCCGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNSVTSS*WMLRLE
Trigger: TTCTAGCCGGAGCATCCACCAAGAAGAAGTCACGCT...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCTCTGGGCAACAGCTTaGGCTCGGGGCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALLWATA*ARGGWQ
Trigger: CTGCCATCCGCCCCGAGCCCAAGCTGTTGCCCAGAG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCACGTGGGCCATGCCTaGGAGAGTAAGAACGTTCAG +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEHVGHA*ESKNVQ
Trigger: CTGAACGTTCTTACTCTCCCAGGCATGGCCCACGTG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGCAGTTGGCCGGTCCTaGGCCTGGGCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGAVGRS*AWAAEW
Trigger: CCACTCTGCAGCCCAGGCTCAGGACCGGCCAACTGC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGAGGTATATAGAATGGTaGCAGAGCAACCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMERYIEW*QSNLGP
Trigger: GGGGCCCAGGTTGCTCTGTCACCATTCTATATACCT...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCGGCTGAGCCTGTTTTaGAGTGCCCGGCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALRLSLF*SARPGI
Trigger: GATGCCAGGCCGGGCACTTCAAAACAGGCTCAGCCG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGTCTTGTCTCCCAGCATaGCTTCCGCCCAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMESCLPA*LPPSSH
Trigger: ATGAGAACTGGGCGGAAGGCATGCTGGGAGACAAGA...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACAGCTGTTGAAATGGTaGTCCGGGCTTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKQLLKW*SGLGWP
Trigger: CGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAAGGCCGTGGGCACATCTaGACCGGGGGCTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKGRGHI*TGGWWL
Trigger: CAGCCACCAGCCCCCGGTGCAGATGTGCCCACGGCC...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTCCTCACGCTTCTTGTaGACAAAGACGATGTCGCCT +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKASSRFL*TKTMSP
Trigger: AGGCGACATCGTCTTTGTGCACAAGAAGCGTGAGGA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTTGGCCAGCGCTGAGGTaGGGGATGGCGGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGWPALR*GMAASR
Trigger: CCGAGAAGCCGCCATCCCGCACCTCAGCGCTGGCCA...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTTTAAAGAAACCGGCTaGTTCCAAGCTCCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAFKETG*FQAPSD
Trigger: GTCGGAGGGAGCTTGGAAGCAGCCGGTTTCTTTAAA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACAGGTTGTTGATCTGTaGACCTCTTTGGTGACAACG +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTQVVDL*TSLVTT
Trigger: CGTTGTCACCAAAGAGGTGCACAGATCAACAACCTG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACGTTACTCTATTCTGTTaGTTGGTACCTGCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHVTLFC*LVPARL
Trigger: AAGGCGCGCAGGTACCAAGCAACAGAATAGAGTAAC...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGCTCCTGCTCTTCTCTaGGAGCTACATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTAPALL*ELHHHE
Trigger: TTCATGATGATGTAGCTCGCAGAGAAGAGCAGGAGC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTAGGCCCCTGGTGGCCTaGAGTCCTGTCCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGRPLVA*SPVPSV
Trigger: CACCGAGGGGACAGGACTGCAGGCCACCAGGGGCCT...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGAGCCTGTTTTGAAGTaGCCGGCCTGGCATCACCCC +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKEPVLK*PAWHHP
Trigger: GGGGTGATGCCAGGCCGGGCACTTCAAAACAGGCTC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAATTTCTTCACCCCGGCTaGTGGCCCGATGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKFLHPG*WPDARA
Trigger: AGCCCTAGCATCGGGCCACCAGCCGGGGTGAAGAAA...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGCACCAGCAAGATGTTaGCGGGCAGTTCGTCCACGC +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKAPARC*RAVRPR
Trigger: GCGTGGACGAACTGCCCGCCAACATCTTGCTGGTGC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCTGGGGCGGGGCGTGTaGCAAGGGCTGGATGCACTG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGLGRGV*QGLDAL
Trigger: CAGTGCATCCAGCCCTTGCCACACGCCCCGCCCCAG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTATCCCTTTGGCCAGTaGAGACCCTCCGACTACATT +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAYPFGQ*RPSDYI
Trigger: AATGTAGTCGGAGGGTCTCCACTGGCCAAAGGGATA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCACTGCCTGGGTGCATaGTTGTGGTTATCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEHCLGA*LWLSLW
Trigger: CCAAAGGGATAACCACAACCATGCACCCAGGCAGTG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTATCTGCACCGGGGGCTaGTGGCTGTGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFICTGG*WLCCGD
Trigger: GTCCCCGCAGCACAGCCACCAGCCCCCGGTGCAGAT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGGCGGATGGCAGCCATaGACAGCGGAGCTTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPGGWQP*TAELAG
Trigger: CCCGGCAAGCTCCGCTGTCCATGGCTGCCATCCGCC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCGCGGTACCTCTCTCTaGGCAACAGCTTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALRGTSL*ATAWAR
Trigger: CCGAGCCCAAGCTGTTGCCCAGAGAGAGGTACCGCG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACACCCTTTGAGGCAAGATaGCCTGAAGAAAGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTPFEAR*PEERAN
Trigger: ATTAGCCCTTTCTTCAGGCCATCTTGCCTCAAAGGG...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp GCAAGCCTGCAGCGGTGCTGCAACCCCCTGATCTCCTaGTACCTCTGGTCTCCAGCAGATGAAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ASLQRCCNPLIS*YLWSPADEGLH
Trigger: GTGCAAACCTTCATCTGCTGGAGACCAGAGGTACAAGGAGATCAGGGGGTTGCAGCACCGCTGCAGGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTAGTACTGGCCAGCGCTaGGGTGCGGGATGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGSTGQR*GAGWRL
Trigger: AAGCCGCCATCCCGCACCTCAGCGCTGGCCAGTACT...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCTGTGCACCTCTTTGGTaGCAACGTGAATTTAAACAC +
Preference number: 4 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPCAPLW*QREFKH
Trigger: GTGTTTAAATTCACGTTGTCACCAAAGAGGTGCACA...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACATCATGGGGCCAGGATaGAACATAAGGGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNIMGPG*NIRVSF
Trigger: GAAACTAACCCTTATGTTTCATCCTGGCCCCATGAT...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAAGGCTGGTGGCTGTGCTaGGGGGACACCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKGWWLC*GDTTEW
Trigger: CCACTCGGTGGTGTCCCCGCAGCACAGCCACCAGCC...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAATCCCCATGGCACCCTaGATCTCGCTCTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKIPMAP*ISLSMG
Trigger: CCCCATAGAGAGCGAGATGCAGGGTGCCATGGGGAT...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGCCACCCACCTCGCCTaGAGACCTCCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPATHLA*RPPATS
Trigger: GGAGGTTGCAGGAGGTCTGCAGGCGAGGTGGGTGGC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCTTCACCCCGGCTGGTaGCCCGATGCTAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGLHPGW*PDARAV
Trigger: CACAGCCCTAGCATCGGGCCACCAGCCGGGGTGAAG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGCAGCACCTTGGCCGTaGTGTCCAGGCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPAAPWP*CPGAPD
Trigger: GTCTGGAGCGCCTGGACACCACGGCCAAGGTGCTGC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCACGTTGAGGGGCAGCTaGACCTTGGGAGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPTLRGS*TLGGVP
Trigger: GGGCACGCCTCCCAAGGTCCAGCTGCCCCTCAACGT...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTGGCAGGCAGGCGGGATaGAGAGTTCTGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFGRQAG*RVLGAQ
Trigger: CTGCGCACCCAGAACTCTCCATCCCGCCTGCCTGCC...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCTGGTGGGGCTGGATGTaGACAGAACACCGATGGGCC +
Preference number: 4 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCWWGWM*TEHRWA
Trigger: GGCCCATCGGTGTTCTGTCCACATCCAGCCCCACCA...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCCTGCCCTGCCGTGGATaGACAGTGAGGACACTTCGG +
Preference number: 4 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCLPCRG*TVRTLR
Trigger: CCGAAGTGTCCTCACTGTCCATCCACGGCAGGGCAG...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCTCCCCCTCTGTGAGCTaGGTGCAGGGAGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCSPSVS*VQGAPV
Trigger: AACTGGTGCTCCCTGCACCCAGCTCACAGAGGGGGA...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCCTCTCTGTGTGCCGTaGAGCTTCCCAGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFPLCVP*SFPGGL
Trigger: GAGGCCGCCTGGGAAGCTCCACGGCACACAGAGAGG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTACCCTTGGGGCGCCATaGCTCCCTCTCTGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFTLGAP*LPLCVP
Trigger: CGGCACACAGAGAGGGAGCCATGGCGCCCCAAGGGT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGATTTTGGTGCAGGATaGGCAACTGATGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSDFGAG*ATDEVW
Trigger: CCAAACTTCATCAGTTGCCCATCCTGCACCAAAATC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCTCTATTCTGTTGCTTaGTACCTGCGCGCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNLYSVA*YLRALK
Trigger: TTTTAAGGCGCGCAGGTACCAAGCAACAGAATAGAG...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCCTCTCCTTCCTAAGGTaGCACCAACGCCCACCCGAC +
Preference number: 4 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCLSFLR*HQRPPD
Trigger: GTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAG...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACAAGGTTTGCACTGCCTaGAATGGGAGCAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHKVCTA*NGSSYL
Trigger: TAAATAACTGCTCCCATTTCAGGCAGTGCAAACCTT...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCGGTGCTGCAACCCCCTaGTCTCCTTGTACCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCGAATP*SPCTSG
Trigger: ACCAGAGGTACAAGGAGATCAGGGGGTTGCAGCACC...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATCTAGGGCTGTGGCGGTaGGAAGTGGCTCACCGACCG +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNLGLWR*EVAHRP
Trigger: CGGTCGGTGAGCCACTTCGCACCGCCACAGCCCTAG...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAATGGACAGCGGAGCTTaGCGGGAAGGAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKMDSGA*REGDVK
Trigger: CTTCACATCTCCTTCCCGGCAAGCTCCGCTGTCCAT...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAAGTGCGGCCGTTCCGCTaGAGGGTCCCCTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKVRPFR*RVPLYQ
Trigger: CTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCAC...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACAAGCCCACAGATTCTaGTCTGGTTCCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKQAHRF*SGSQQG
Trigger: CCCCTGTTGGGAACCAGAGCAGAATCTGTGGGCTTG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCGGCTGGGGTTGACCTaGGTGCTCCTTCTACCGCCA +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFRLGLT*VLLLPP
Trigger: TGGCGGTAGAAGGAGCACGCAGGTCAACCCCAGCCG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATGTGTGTGTGAACTGTaGAAAGTACAAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTCVCEL*KVQRIS
Trigger: GGAGATCCTTTGTACTTTGCACAGTTCACACACACA...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATGGCATGGCAGCACCTTaGCCGTGGTGTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNGMAAP*PWCPGA
Trigger: AGCGCCTGGACACCACGGCCAAGGTGCTGCCATGCC...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCCACAGATTCTGCTCTaGTTCCCAACAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALPQILL*FPTGAV
Trigger: CACCGCCCCTGTTGGGAACCAGAGCAGAATCTGTGG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGAAACACAGGCATCATaGTTTGTCATCACTGACAAG +
Preference number: 4 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSETQAS*FVITDK
Trigger: CTTGTCAGTGATGACAAACCATGATGCCTGTGTTTC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp AAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTaGAAGTGCCCGGCCTGGCATCACCCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: KVQRISQSAEPV*KCPAWHHPMRM
Trigger: CATCCTCATGGGGTGATGCCAGGCCGGGCACTTCAAAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATCCTGGCATCACCCCATaGGGATGCCAGGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNPGITP*GCQEST
Trigger: GGTGCTCTCCTGGCATCCTCATGGGGTGATGCCAGG...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATTTGGGAGGCGTGCCCTaGTCTCCAGACACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNLGGVP*SPDTEA
Trigger: TGCCTCGGTGTCTGGAGAGCAGGGCACGCCTCCCAA...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGAACGCTGCCATGGCTaGAAACCACAGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPERCHG*KPQPQA
Trigger: GGCCTGTGGCTGTGGTTTGCAGCCATGGCAGCGTTC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCAGCTCTCTACCATGCTaGATGCAGTGGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALSSLPC*MQWAVS
Trigger: GGACACAGCCCACTGCATGCAGCATGGTAGAGAGCT...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCTGCACTGGATATAGCTaGCTGGGAGGAAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALCTGYS*LGGSPV
Trigger: CACAGGGCTTCCTCCCAGCCAGCTATATCCAGTGCA...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCTGCAGCGGCTGGGCATaGCTTGTCCATCTCAATGAG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALCSGWA*LVHLNE
Trigger: CTCATTGAGATGGACAAGCCATGCCCAGCCGCTGCA...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATGCATCTCGCTCTCTATaGGGCAGGACCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNASRSL*GRTLPC
Trigger: GCAGGGCAGGGTCCTGCCCCATAGAGAGCGAGATGC...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTATCTCCGCCTCACTCTaGGGTGGGTACGAGACCACC +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFISASL*GGYETT
Trigger: GGTGGTCTCGTACCCACCCCAGAGTGAGGCGGAGAT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGCCCAAGGCCACTACATaGCTAAGATGTGTACATCAT +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEPKATT*LRCVHH
Trigger: ATGATGTACACATCTTAGCCATGTAGTGGCCTTGGG...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp TTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTaGAAGAACATCCCAGGTGTGCTCTCCGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FFAVSTEGVGIS*KNIPGVLSVWG
Trigger: CCCCCAAACGGAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTGCAGCGCACGACAGATaGGCAAGGTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFAAHDR*ARSPIL
Trigger: CAGGATTGGAGACCTTGCTCATCTGTCGTGCGCTGC...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTAGATGGCGGGGAGCGTaGCTTCTTCTTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFRWRGA*LLLGGC
Trigger: GCATCCACCAAGAAGAAGTCACGCTCCCCGCCATCT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCAGCCGGGCGGCAGGTaGCTGAGGTATATAGAATGG +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFQPGGR*LRYIEW
Trigger: CCATTCTATATACCTCAGTCACCTGCCGCCCGGCTG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGATCCCTGAAAACCAATaGCACCCTATGTTACCAAAG +
Preference number: 4 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEIPENQ*HPMLPK
Trigger: CTTTGGTAACATAGGGTGTCATTGGTTTTCAGGGAT...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGATCTCCCAGTCGGCTaGGCCTGTTTTGAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGDLPVG*ACFEVP
Trigger: GGGCACTTCAAAACAGGCTCAGCCGACTGGGAGATC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGCTGTAGAGGGCCTTaGCATAGGGAAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPSCRGP*HREAGR
Trigger: CCTGCCTGCTTCCCTATGGCAAGGCCCTCTACAGCT...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATGGCATTGCAGCTGGATaGAGCGGCTGGGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNGIAAG*SGWAWL
Trigger: AAGCCATGCCCAGCCGCTGCATCCAGCTGCAATGCC...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATCTCCCCGTTGAGGTTTaGGGCACTGACGTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNLPVEV*GTDVGR
Trigger: CCTCCCAACGTCAGTGCCGCAAACCTCAACGGGGAG...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCGCCTGCAGACCTCCTaGAACCTCCAACCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGRLQTS*NLQPCL
Trigger: TAAGCAGGGTTGGAGGTTGCAGGAGGTCTGCAGGCG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGCCATGCATTTCCTCTaGTCTCAGGCAGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPAMHFL*SQAARH
Trigger: ATGCCGGGCTGCCTGAGAGCAGAGGAAATGCATGGC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCCGGCAGAAAGTGTGTTaGCATGGCAGCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPRQKVC*HGSTLA
Trigger: GGCCAAGGTGCTGCCATGCCAACACACTTTCTGCCG...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATCCGTGCAGCTCGCCGTaGTACCACTGTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNPCSSP*YHCSST
Trigger: GGTGGATGAACAGTGGTACCACGGCGAGCTGCACGG...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGCACCGAGGCAGCCCGTaGGACAGCCGTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKHRGSP*DSRGGR
Trigger: TCTACCCCCACGGCTGTCCCACGGGCTGCCTCGGTG...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCCTCCTGCAGGCACCCTaGAAACGGGTGTCACGTAGT +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPLLQAP*KRVSRS
Trigger: ACTACGTGACACCCGTTTCCAGGGTGCCTGCAGGAG...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAACATCCTCCAAAGACATaGAGATATTCGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKHPPKT*RYSPQL
Trigger: GAGCTGGGGCGAATATCTCCATGTCTTTGGAGGATG...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAATTGGCTCCAGAGCTCTaGCCAGACCCACGCATCGCT +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKLAPEL*PDPRIA
Trigger: AGCGATGCGTGGGTCTGGCCAGAGCTCTGGAGCCAA...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCTTCAGCCATGGCTGTaGACTCTACCATGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALLQPWL*TLPCSS
Trigger: TGAGGAGCATGGTAGAGTCCACAGCCATGGCTGAAG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTTTGAAGTGCCCGGCCTaGCATCACCCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFLKCPA*HHPMRM
Trigger: CATCCTCATGGGGTGATGCCAGGCCGGGCACTTCAA...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAATTGAACCAGCCATCCTaGCACTTCTCGAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKLNQPS*HFSRTR
Trigger: CCGGGTCCTCGAGAAGTGTCAGGATGGCTGGTTCAA...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAAGTCTTCCTGGGAAGTaGGCCATGGTGCTAATGAAT +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKSLPGK*AMVLMN
Trigger: ATTCATTAGCACCATGGCTCACTTCCCAGGAAGACT...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTCCAAAATCACACGCTaGCATTTGTGTCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKASKITR*HLCLTK
Trigger: TTTTGTTAGACACAAATGTCAGCGTGTGATTTTGGA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATGTATCCCCCGCCAGGTaGCTTGGAGATGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNVSPAR*LGDDLE
Trigger: TTCCAGGTCATCTCCAAGGCACCTGGCGGGGGATAC...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATTCCCAGCATCAAAGCTaGACCTCCTCCTCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNSQHQS*TSSSLA
Trigger: GGCGAGAGAGGAGGAGGTGCAGCTTTGATGCTGGGA...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAACTGGATATAGCTGGCTaGGAGGAAGCCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKLDIAG*EEALCA
Trigger: GGCACACAGGGCTTCCTCCCAGCCAGCTATATCCAG...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATTGGAATGCCTGTGGCTaGCAGCCTGGGAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNWNACG*QPGRIC
Trigger: ACAGATCCTCCCAGGCTGCCAGCCACAGGCATTCCA...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAATCCATGGAATGCCTGTaGCTGGCAGCCTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKSMECL*LAAWED
Trigger: ATCCTCCCAGGCTGCCAGCCACAGGCATTCCATGGA...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGTTTGCATCCCGTGTTaGTGGGGCTGGATGTGGACA +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPVCIPC*WGWMWT
Trigger: TGTCCACATCCAGCCCCACCAACACGGGATGCAAAC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCTGTTGCTTATACTACTaGCAGGCGACAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALCCLYY*QATSPQ
Trigger: CTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACA...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAATCTCCTTGTACCTCTaGTCTCCAGCAGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKISLYL*SPADEG
Trigger: ACCTTCATCTGCTGGAGACCAGAGGTACAAGGAGAT...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGTCTAACAAAAACACTTaGGATAGGGTGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLSFLRWHQRPPDSALKASNKNT*DRVCVF
Trigger: AAACACACACACCCTATCCCAAGTGTTTTTGTTAGA...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGCCGGGAAGGAGATGTaGAGTTTAGATCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPAGKEM*SLDPRS
Trigger: GCTCCTTGGATCTAAACTTCACATCTCCTTCCCGGC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGTGGCAGTGGCCAGGCTaGTCAGACTCCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKWQWPG*SDSHCL
Trigger: CAGGCAGTGGGAGTCTGAGCAGCCTGGCCACTGCCA...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGATGAAGGTTTGCACTaGCTGAAATGGGAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKDEGLH*LKWEQL
Trigger: TAACTGCTCCCATTTCAGGCAGTGCAAACCTTCATC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTTTGTGGTTATCCCTTTaGCCAGTGGAGACCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFLWLSL*PVETLR
Trigger: TCGGAGGGTCTCCACTGGCCAAAGGGATAACCACAA...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCCTGATCAGTCTTCCTaGGAAGTGAGCCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGPDQSS*EVSHGA
Trigger: AGCACCATGGCTCACTTCCCAGGAAGACTGATCAGG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCTTGGTCTGGTTTCCCTaGAGAACACCTGCGTCATCC +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPLVWFP*RTPASS
Trigger: GGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAA...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCAGACTTGACTTGGTCTaGTTTCCCTGGAGAACACCT +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALRLDLV*FPWRTP
Trigger: AGGTGTTCTCCAGGGAAACCAGACCAAGTCAAGTCT...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCAAAATTCTGCCCCTTTaGTGTCGCCTCAGACATCTT +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALKILPL*CRLRHL
Trigger: AAGATGTCTGAGGCGACATCAAAGGGGCAGAATTTT...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAATCTTCTCGTCTAGTTTaGATCCCGTGTTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKSSRLV*IPCWWG
Trigger: GCCCCACCAACACGGGATGCAAACTAGACGAGAAGA...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTAGAACATCCCAGGTGTaGTCTCCGTTTGGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGRTSQV*SPFGGF
Trigger: AAAACCCCCAAACGGAGAGCACACCTGGGATGTTCT...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGGGGCAGCTGTTGAAATaGTGCTCCGGGCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKGQLLK*CSGLGW
Trigger: CCAGCCAAGCCCGGAGCACCATTTCAACAGCTGCCC...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGTGACTTCTTCTTGGTaGATGCTCCGGCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGVTSSW*MLRLEA
Trigger: AGCTTCTAGCCGGAGCATCCACCAAGAAGAAGTCAC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGTCAGAGACGCCCCCTTaGACCAGCCATCCTGACACT +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKSETPP*TSHPDT
Trigger: AGTGTCAGGATGGCTGGTTCAAGGGGGCGTCTCTGA...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCAAGGGACAATGGTGGTaGACAGAAAGTGTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALKGQWW*TESVAY
Trigger: ATAAGCAACACTTTCTGTTCACCACCATTGTCCCTT...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCGAACAAAATTGTCCCTaGAGGGCTCCTGATCAGTCT +
Preference number: 4 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPEQNCP*RAPDQS
Trigger: AGACTGATCAGGAGCCCTTCAGGGACAATTTTGTTC...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGGGGTGGGCATTTCCTTaGAGAACATCCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKGWAFP*RTSQVC
Trigger: GCACACCTGGGATGTTCTTCAAGGAAATGCCCACCC...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGTCCCTGAAGGGCTCCTaGTCAGTCTTCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKSLKGS*SVFLGS
Trigger: ACTTCCCAGGAAGACTGATCAGGAGCCCTTCAGGGA...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAATGTGTTCCTAAGGTGTaGATCTTGAGAACAAAATTG +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKCVPKV*ILRTKL
Trigger: CAATTTTGTTCTCAAGATTCACACCTTAGGAACACA...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATTCAAGGTGCTTTCTTTaGAGTTTCCACAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNSRCFL*SFHRGG
Trigger: ACCCCCTCTGTGGAAACTGCAAAGAAAGCACCTTGA...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGTGAACAGAAAGTGTTaGTTATACTACTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGVNRKC*LYYWQA
Trigger: CGCCTGCCAGTAGTATAAGCAACACTTTCTGTTCAC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTAGACAGTCCTTGTCTTaGTCTTTGTCCTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFRQSLS*SLSFIS
Trigger: CGAGATGAAGGACAAAGACCAAGACAAGGACTGTCT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTGGAGCTGATCAACACTaGAGCACTAATTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGGADQH*STNFHG
Trigger: TCCATGGAAATTAGTGCTCCAGTGTTGATCAGCTCC...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGTGCATCCCGTGTTGGTaGGGCTGGATGTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKCIPCW*GWMWTE
Trigger: TTCTGTCCACATCCAGCCCCACCAACACGGGATGCA...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGCTGGTCTCCAGCAGATaGAGGTTTGCACTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKLVSSR*RFALPE
Trigger: TTCAGGCAGTGCAAACCTTCATCTGCTGGAGACCAG...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGTTTCAAAGTCTTCATaGCAGGCAAAAGAATGTATT +
Preference number: 4 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKVSKSS*QAKECI
Trigger: AATACATTCTTTTGCCTGGCATGAAGACTTTGAAAC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAACTGTGGACTCTACCATaGTCCTCAAAGGAAATCTCT +
Preference number: 4 (lower is better)
Translates to: GANEYTFISPTQGGPSIKLWTLP*SSKEIS
Trigger: AGAGATTTCCTTTGAGGAGCATGGTAGAGTCCACAG...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGCTGGGTGCATGGTTGTaGTTATCCCTTTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKLGAWL*LSLWPV
Trigger: CACTGGCCAAAGGGATAACCACAACCATGCACCCAG...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTAATCTATTATCATCTTaGGGGAGGGAAAGGCATGAC +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFNLLSS*GRERHD
Trigger: GTCATGCCTTTCCCTCCCCCAAGATGATAATAGATT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp AGTAATGCAAGGGACAATGGTGGTGAACAGAAAGTGTaGCTTATACTACTGGCAGGCGACAAGCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: SNARDNGGEQKV*LILLAGDKPTD
Trigger: ATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACCACCATTGTCCCTTGCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTAATTGCAGTTCTCTCTaGGGCAATAAAGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFNCSSL*GNKGKI
Trigger: AATCTTCCCTTTATTGCCTCAGAGAGAACTGCAATT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR GCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGTCCATCTCAATGAGCTaGTTGGCGGAGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKSISMS*LAESLS
Trigger: GCTCAATGACTCCGCCAAGCAGCTCATTGAGATGGA...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp TTTGGTGACAACGTGAATTTAAACACGCACAGGATTTaGGTGCAGGATGGGCAACTGATGAAGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FGDNVNLNTHRI*VQDGQLMKFGN
Trigger: ATTGCCAAACTTCATCAGTTGCCCATCCTGCACCAAAATCCTGTGCGTGTTTAAATTCACGTTGTCACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR TCA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGAATTGGTTACATCCCTaGAAACCAATGACACCCTAT +
Preference number: 4 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKNWLHP*KPMTPY
Trigger: ATAGGGTGTCATTGGTTTTCAGGGATGTAACCAATT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
3UTR CAA 72 bp AGTCTTCATGCCAGGCAAAAGAATGTATTTCTGGAATaGGTTACATCCCTGAAAACCAATGACACCCTATGT +
Preference number: 4 (lower is better)
Translates to: SLHARQKNVFLE*VTSLKTNDTLC
Trigger: ACATAGGGTGTCATTGGTTTTCAGGGATGTAACCAATTCCAGAAATACATTCTTTTGCCTGGCATGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp GCGGGGACCGGCCAGCCGAGCCCGCCCAGTCCTGAGCGCAGCGCCTaGGGCTGCGGGCTACACCTGTCCCGCCGCAAGTCCGCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: AGTGQPSPPSPERSA*GCGLHLSRRKSAPR
Trigger: GCGCGGGGCGGACTTGCGGCGGGACAGGTGTAGCCCGCAGCCGCAGGCGCTGCGCTCAGGACTGGGCGGGCTCGGCTGGCCGGTCCCCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp ACCGGCCTGCGTGGCGGGGACCGGCCAGCCGAGCCCGCCCAGTCCTaGGCGCAGCGCCTGCGGCTGCGGGCTACACCTGTCCCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: TGLRGGDRPAEPAQS*AQRLRLRATPVPPQ
Trigger: TTGCGGCGGGACAGGTGTAGCCCGCAGCCGCAGGCGCTGCGCTCAGGACTGGGCGGGCTCGGCTGGCCGGTCCCCGCCACGCAGGCCGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp CGACGCCGCCGTCGCTCGCCTGGCCTGTCCTCGTCGCCCTCGCTCTaGGCAGCAGCGGCGGCCGCCTTGGATGCGCACAGCCAGGACGCT +
Preference number: 5 (lower is better)
Translates to: RRRRRSPGLSSSPSL*AAAAAALDAHSQDA
Trigger: AGCGTCCTGGCTGTGCGCATCCAAGGCGGCCGCCGCTGCTGCGCAGAGCGAGGGCGACGAGGACAGGCCAGGCGAGCGACGGCGGCGTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp GCGGGCTGCCGCCGGGGCTGGTGCCCGCGCGGGGCCGCTGACGGATaGCGTCCAGCAGTCGCACCAGCAAGATGTTGGCGGGCAGTTCGT +
Preference number: 5 (lower is better)
Translates to: AGCRRGWCPRGAADG*RPAVAPARCWRAVR
Trigger: ACGAACTGCCCGCCAACATCTTGCTGGTGCGACTGCTGGACGGCATCCGTCAGCGGCCCCGCGCGGGCACCAGCCCCGGCGGCAGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp CATAGGGAAGCAGGCAGGGATTCTTTGCCGCCGGCGCGGTCCTGCTaGTCGCCAGCTCCCGCAGACTGCCGGCGGTGCTGCCCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: HREAGRDSLPPARSC*SPAPADCRRCCPRP
Trigger: CGGCCGCGGGCAGCACCGCCGGCAGTCTGCGGGAGCTGGCGACCAGCAGGACCGCGCCGGCGGCAAAGAATCCCTGCCTGCTTCCCTATG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp ACTTTCTTCACCCCGGCTGGTGGCCCGATGCTAGGGCTGTGGCGGTaGGAAGTGGCTCACCGACCGGCCTGCGTGGCGGGGACCGGCCTG +
Preference number: 5 (lower is better)
Translates to: TFFTPAGGPMLGLWR*EVAHRPACVAGTGL
Trigger: CAGGCCGGTCCCCGCCACGCAGGCCGGTCGGTGAGCCACTTCGCACCGCCACAGCCCTAGCATCGGGCCACCAGCCGGGGTGAAGAAAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp ACGCCGCAGCCCACCAGGATGCGGCACTCGGGGCAGCGCAGCTCGTaGCGCGAGCACACGATGCTCTCCAGGCAGCGGCGGCAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: TPQPTRMRHSGQRSS*REHTMLSRQRRQKV
Trigger: CACTTTCTGCCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCGCCACGAGCTGCGCTGCCCCGAGTGCCGCATCCTGGTGGGCTGCGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp CAGGACTGGGGAGCCGGGCTCCGCCGTGACTTTCTTCACCCCGGCTaGTGGCCCGATGCTAGGGCTGTGGCGGTGCGAAGTGGCTCACCG +
Preference number: 5 (lower is better)
Translates to: QDWGAGLRRDFLHPG*WPDARAVAVRSGSP
Trigger: CGGTGAGCCACTTCGCACCGCCACAGCCCTAGCATCGGGCCACCAGCCGGGGTGAAGAAAGTCACGGCGGAGCCCGGCTCCCCAGTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp GCTGGTGGCAGGCAGGCGGGATGGAGAGTTCTGGGTGCGCAGGGGTaGCACGGTGGCAGTTGGCCGGTCCTGAGCCTGGGCTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: AGGRQAGWRVLGAQG*HGGSWPVLSLGCRV
Trigger: CACTCTGCAGCCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAGAACTCTCCATCCCGCCTGCCTGCCACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp GCCAGGTACACGTTGAGGGGCAGCTGGACCTTGGGAGGCGTGCCCTaGTCTCCAGACACCGAGGCAGCCCGTGGGACAGCCGTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: ARYTLRGSWTLGGVP*SPDTEAARGTAVGV
Trigger: TACCCCCACGGCTGTCCCACGGGCTGCCTCGGTGTCTGGAGAGCAGGGCACGCCTCCCAAGGTCCAGCTGCCCCTCAACGTGTACCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp CCCGCCGAGGAGGAGACATCCTGGGTGGGAGCAGCGCACGACAGATaGGCAAGGTCTCCAATCCTGGCCGCGGCTCGGGGATCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PAEEETSWVGAAHDR*ARSPILAAARGSLE
Trigger: CTCCAGCGATCCCCGAGCCGCGGCCAGGATTGGAGACCTTGCTCATCTGTCGTGCGCTGCTCCCACCCAGGATGTCTCCTCCTCGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp GGATGCGGCACTCGGGGCAGCGCAGCTCGTGGCGCGAGCACACGATaGTCTCCAGGCAGCGGCGGCAGAAAGTGTGTTGGCATGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GCGTRGSAARGASTR*SPGSGGRKCVGMAA
Trigger: TGCTGCCATGCCAACACACTTTCTGCCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCGCCACGAGCTGCGCTGCCCCGAGTGCCGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp CTGCCGTGGATGGACAGTGAGGACACTTCGGGGCCCACTGCACCTTaGAGCAGGGCGTCCACGGCCACCTGGGGGTCGTGGGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LPWMDSEDTSGPTAP*SRASTATWGSWVGD
Trigger: GTCTCCAACCCACGACCCCCAGGTGGCCGTGGACGCCCTGCTCCAAGGTGCAGTGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGCAGGCAGGGATTCTTaGCCGCCGGCGCGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTAGRDS*PPARSC
Trigger: GCAGGACCGCGCCGGCGGCAAAGAATCCCTGCCTGC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp CTCGCTCTCTATGGGGCAGGACCCTGCCCTGCCGTGGATGGACAGTaGGGACACTTCGGGGCCCACTGCACCTTGGAGCAGGGCGTCCAC +
Preference number: 5 (lower is better)
Translates to: LALYGAGPCPAVDGQ*GHFGAHCTLEQGVH
Trigger: GTGGACGCCCTGCTCCAAGGTGCAGTGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp AGCTGGGTGCAGGGAGCACCAGTTCTCAGAAGCTCTCGACGAAGCTaGCCGGGAAGAGGCCTGTGCGGCCGTTCCGCTGCAGGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SWVQGAPVLRSSRRS*PGRGLCGRSAAGSP
Trigger: AGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAGCTTCGTCGAGAGCTTCTGAGAACTGGTGCTCCCTGCACCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTTGGCATGGCAGCACCTaGGCCGTGGTGTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSWHGST*AVVSRR
Trigger: GCGCCTGGACACCACGGCCAAGGTGCTGCCATGCCA...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGGGCTTGGCTGGCCGTaGGCTGGGCTGAGTGCCGTA +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSGLGWP*AGLSAV
Trigger: TACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGTGACACGGTGGCAGTaGGCCGGTCCTGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTVTRWQ*AGPEPG
Trigger: CCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCAC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp GAGTTCTGGGTGCGCAGGGGTGACACGGTGGCAGTTGGCCGGTCCTaGGCCTGGGCTGCAGAGTGGGCAGCTGTTGAAATGGTGCTCCGG +
Preference number: 5 (lower is better)
Translates to: EFWVRRGDTVAVGRS*AWAAEWAAVEMVLR
Trigger: CCGGAGCACCATTTCAACAGCTGCCCACTCTGCAGCCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp CTCTCGACGAAGCTGCCCGGGAAGAGGCCTGTGCGGCCGTTCCGCTaGAGGGTCCCCTTGTACCAGCCGTCCTCACGCTTCTTGTGCACA +
Preference number: 5 (lower is better)
Translates to: LSTKLPGKRPVRPFR*RVPLYQPSSRFLCT
Trigger: TGTGCACAAGAAGCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAGCTTCGTCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp CCAGTTCTCAGAAGCTCTCGACGAAGCTGCCCGGGAAGAGGCCTGTaGGGCCGTTCCGCTGCAGGGTCCCCTTGTACCAGCCGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PVLRSSRRSCPGRGL*GRSAAGSPCTSRPH
Trigger: GTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAGCTTCGTCGAGAGCTTCTGAGAACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp CGCGAGCACACGATGCTCTCCAGGCAGCGGCGGCAGAAAGTGTGTTaGCATGGCAGCACCTTGGCCGTGGTGTCCAGGCGCTCCAGACAC +
Preference number: 5 (lower is better)
Translates to: REHTMLSRQRRQKVC*HGSTLAVVSRRSRH
Trigger: GTGTCTGGAGCGCCTGGACACCACGGCCAAGGTGCTGCCATGCCAACACACTTTCTGCCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp TGGGCAGCTGTTGAAATGGTGCTCCGGGCTTGGCTGGCCGTTGGCTaGGCTGAGTGCCGTAGACAGCTGCCTGTTGGGGGCGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: WAAVEMVLRAWLAVG*AECRRQLPVGGEAV
Trigger: CACAGCCTCGCCCCCAACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp GGGCTGCAGAGTGGGCAGCTGTTGAAATGGTGCTCCGGGCTTGGCTaGCCGTTGGCTGGGCTGAGTGCCGTAGACAGCTGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLQSGQLLKWCSGLG*PLAGLSAVDSCLLG
Trigger: CCCCAACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTGCCCACTCTGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGAGGGCAGGGAGGCATaGCAGCTGGATGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSEGREA*QLDAAA
Trigger: AGCCGCTGCATCCAGCTGCAATGCCTCCCTGCCCTC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCAGCGCCAGGTACACGTaGAGGGGCAGCTGGACCTTG +
Preference number: 5 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPSARYT*RGSWTL
Trigger: CAAGGTCCAGCTGCCCCTCAACGTGTACCTGGCGCT...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACCCTCCAGCCTCCCCGTaGAGGTTTGCGGCACTGACG +
Preference number: 5 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHPPASP*RFAALT
Trigger: CGTCAGTGCCGCAAACCTCAACGGGGAGGCTGGAGG...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp CCCTCTCTGTGTGCCGTGGAGCTTCCCAGGCGGCCTCCCCCTCTGTaGGCTGGGTGCAGGGAGCACCAGTTCTCAGAAGCTCTCGACGAA +
Preference number: 5 (lower is better)
Translates to: PSLCAVELPRRPPPL*AGCREHQFSEALDE
Trigger: TTCGTCGAGAGCTTCTGAGAACTGGTGCTCCCTGCACCCAGCTCACAGAGGGGGAGGCCGCCTGGGAAGCTCCACGGCACACAGAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp CCATGGCACCCTGCATCTCGCTCTCTATGGGGCAGGACCCTGCCCTaGCGTGGATGGACAGTGAGGACACTTCGGGGCCCACTGCACCTT +
Preference number: 5 (lower is better)
Translates to: PWHPASRSLWGRTLP*RGWTVRTLRGPLHL
Trigger: AAGGTGCAGTGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCGAGATGCAGGGTGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp AAGGAGCCTGCCTTCCTGTGCAGAGGCTCCATCCCCATGGCACCCTaGATCTCGCTCTCTATGGGGCAGGACCCTGCCCTGCCGTGGATG +
Preference number: 5 (lower is better)
Translates to: KEPAFLCRGSIPMAP*ISLSMGQDPALPWM
Trigger: CATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCGAGATGCAGGGTGCCATGGGGATGGAGCCTCTGCACAGGAAGGCAGGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCTGCTTGGCGGAGTCATaGAGCTCCACGTACAGGAGC +
Preference number: 5 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPCLAES*SSTYRS
Trigger: GCTCCTGTACGTGGAGCTCAATGACTCCGCCAAGCA...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGCGGCTGGGCATGGCTaGTCCATCTCAATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSAAGHG*SISMSC
Trigger: GCAGCTCATTGAGATGGACAAGCCATGCCCAGCCGC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGGTAGACAGCTGCCTGTaGGGGGCGAGGCTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEVDSCL*GARLWG
Trigger: ACCCCACAGCCTCGCCCCCAACAGGCAGCTGTCTAC...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTTCGGCTGAGCCTGTTTaGAAGTGCCCGGCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSSAEPV*KCPAWH
Trigger: ATGCCAGGCCGGGCACTTCAAAACAGGCTCAGCCGA...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp AGGGCTGGATGCACTGGATATAGCTGGCTGGGAGGAAGCCCTGTGTaGCGTGCAGCTCGCCGTGGTACCACTGTTCATCCACCTTGCGCC +
Preference number: 5 (lower is better)
Translates to: RAGCTGYSWLGGSPV*RAARRGTTVHPPCA
Trigger: GGCGCAAGGTGGATGAACAGTGGTACCACGGCGAGCTGCACGGCACACAGGGCTTCCTCCCAGCCAGCTATATCCAGTGCATCCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCATGGACAGCGGAGCTaGCCGGGAAGGAGATGTGAA +
Preference number: 5 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNHGQRS*PGRRCE
Trigger: TTCACATCTCCTTCCCGGCAAGCTCCGCTGTCCATG...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCCTCAAGGTGCTTTCTTaGCAGTTTCCACAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPLKVLS*QFPQRG
Trigger: CCCCCTCTGTGGAAACTGCAAAGAAAGCACCTTGAG...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACCCCGGTTACTCTATTCTGTaGCTTGGTACCTGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: LSPSQLPDLASLQRCCNPGYSIL*LGTCAP
Trigger: AGGCGCGCAGGTACCAAGCAACAGAATAGAGTAACC...GGGGTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp AACAGCTTGGGCTCGGGGCGGATGGCAGCCATGGACAGCGGAGCTTaGCGGGAAGGAGATGTGAAGTTTAGATCCAAGGAGCCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: NSLGSGRMAAMDSGA*REGDVKFRSKEPAF
Trigger: GAAGGCAGGCTCCTTGGATCTAAACTTCACATCTCCTTCCCGGCAAGCTCCGCTGTCCATGGCTGCCATCCGCCCCGAGCCCAAGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp TGCTCAGACTCCCACTGCCTGGGTGCATGGTTGTGGTTATCCCTTTaGCCAGTGGAGACCCTCCGACTACATTATTCCGGGGCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: CSDSHCLGAWLWLSL*PVETLRLHYSGAAL
Trigger: CAGGGCCGCCCCGGAATAATGTAGTCGGAGGGTCTCCACTGGCCAAAGGGATAACCACAACCATGCACCCAGGCAGTGGGAGTCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTGTCAGAATCTCGTCCTaGGTGAAGGTCAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSVRISS*VKVRQS
Trigger: GGACTGTCTGACCTTCACCAAGGACGAGATTCTGAC...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCAGGGGCAGCTGGACCTaGGGAGGCGTGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALRGSWT*GGVPCS
Trigger: AGAGCAGGGCACGCCTCCCAAGGTCCAGCTGCCCCT...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACATCCTCCAAAGACATGGAGGTTGTGGTTATCCCTTaGGCCAGTGGAGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: PTRLCPESGQLTSSKDMEVVVIP*ASGDPP
Trigger: CGGAGGGTCTCCACTGGCCAAAGGGATAACCACAAC...CTCCATGTCTTTGGAGGATGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGAGCGTGACTTCTTCTaGGTGGATGCTCCGGCTAGA +
Preference number: 5 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAERDFF*VDAPAR
Trigger: TCTAGCCGGAGCATCCACCAAGAAGAAGTCACGCTC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGCCGTCCTCACGCTTCTaGTGCACAAAGACGATGTCG +
Preference number: 5 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAPSSRF*CTKTMS
Trigger: CGACATCGTCTTTGTGCACAAGAAGCGTGAGGACGG...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAATCAGGCAGCCCGGCATaGGCTCCAGAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKSGSPA*APELWP
Trigger: TGGCCAGAGCTCTGGAGCCAATGCCGGGCTGCCTGA...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 90 bp GTTTCTTGGTGTTCTTCTTGCCATCCACACGCCGCTGAAAGGCACTaGCCGCCCCTGAGCTGCTTAAAGTGGGACTTGGGGCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: VSWCSSCHPHAAERH*PPLSCLKWDLGPRW
Trigger: CCAGCGTGGCCCCAAGTCCCACTTTAAGCAGCTCAGGGGCGGTCAGTGCCTTTCAGCGGCGTGTGGATGGCAAGAAGAACACCAAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 90 bp TTCCGCTGCAGGGTCCCCTTGTACCAGCCGTCCTCACGCTTCTTGTaGACAAAGACGATGTCGCCTTCCTTCAGCTCGATCTCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: FRCRVPLYQPSSRFL*TKTMSPSFSSISAS
Trigger: TGAGGCGGAGATCGAGCTGAAGGAAGGCGACATCGTCTTTGTGCACAAGAAGCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACACGATGATGTCCCCCTaGTTGAACTTGAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNTMMSP*LNLRSP
Trigger: TGGTGACCTCAAGTTCAACAAGGGGGACATCATCGT...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCGATGACCTGGAACCCTaGGGGCGCCATGGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCDDLEP*GRHGSL
Trigger: GAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATC...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp TCGCTCTCCTTCCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCGTCATCCAGGTTGTaGATCTGTGCACCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SLSFLRWHQRPPDSALKAASSRL*ICAPLW
Trigger: CCAAAGAGGTGCACAGATCAACAACCTGGATGACGC...CGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGGAAGGAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 90 bp CAGTGGCCAGGCTGCTCAGACTCCCACTGCCTGGGTGCATGGTTGTaGTTATCCCTTTGGCCAGTGGAGACCCTCCGACTACATTATTCC +
Preference number: 5 (lower is better)
Translates to: QWPGCSDSHCLGAWL*LSLWPVETLRLHYS
Trigger: GGAATAATGTAGTCGGAGGGTCTCCACTGGCCAAAGGGATAACCACAACCATGCACCCAGGCAGTGGGAGTCTGAGCAGCCTGGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAAAGGTCAGACAGTCCTaGTCTTGGTCTTTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTKVRQS*SWSLSF
Trigger: GAAGGACAAAGACCAAGACAAGGACTGTCTGACCTT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCCCCAACTCCCCGATCTaGCAAGCCTGCAGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCPNSPI*QACSGA
Trigger: AGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGG...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAAAGTTACCTGGAGACTaGACTTGGTCTGGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTKLPGD*TWSGFP
Trigger: AGGGAAACCAGACCAAGTCAAGTCTCCAGGTAACTT...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp AAGCCCAGGGCAGCCCAGAAAGATGATCTCCAGCGCTCCTGGCCCCCATGCCACAAACATGTGTACCCTTaGAGGCAAGATGGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: KPRAAQKDDLQRSWPPCHKHVYP*RQDGLK
Trigger: CTTCAGGCCATCTTGCCTCAAAGGGTACACATGTTT...GTGGCATGGGGGCCAGGAGCGCTGGAGATCATCTTTCTGGGCTGCCCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTTCTCTGGGCAACAGCTaGGGCTCGGGGCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGSLGNS*GSGRMA
Trigger: TGCCATCCGCCCCGAGCCCAAGCTGTTGCCCAGAGA...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAACGCTGCAGGGTCCCCTaGTACCAGCCGTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: GANEYTFISPTQGGPSIKRCRVP*YQPSSR
Trigger: GCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCG...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCCCCCCGCCAGGTGCCTaGGAGATGACCTGGAACCCT +
Preference number: 5 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPPPPGA*EMTWNP
Trigger: AGGGTTCCAGGTCATCTCCAAGGCACCTGGCGGGGG...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GCCAGGTGCCTTGGAGATGACCTGGAACCCTTGGGGCGCCATGGCTCCCTCTCTCACAGGCATCATGGTTaGTCATCACTGACAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ARCLGDDLEPLGRHGSLSHRHHG*SSLTSL
Trigger: AAGACTTGTCAGTGATGACAAACCATGATGCCTGTG...AGAGAGGGAGCCATGGCGCCCCAAGGGTTCCAGGTCATCTCCAAGGCACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGGCAGCGGCGGCCGCCTaGGATGCGCACAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKAAAAA*DAHSQD
Trigger: GTCCTGGCTGTGCGCATCCAAGGCGGCCGCCGCTGC...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCCACTGTTCATCCACCTaGCGCCGCAGGACGATGATG +
Preference number: 5 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALHCSST*RRRTMM
Trigger: CATCATCGTCCTGCGGCGCAAGGTGGATGAACAGTG...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACTCCTTGTCTTGGTCTTaGTCCTTCATCTCGAAATCA +
Preference number: 5 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNSLSWS*SFISKS
Trigger: TGATTTCGAGATGAAGGACAAAGACCAAGACAAGGA...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GGTGCGGGATGGCGGCTTCTCGGCGCTCTCCCAAAGCCATATGGGAAATATAAAGGGGTGGGCATTTCCTaGAAGAACATCCCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GAGWRLLGALPKPYGKYKGVGIS*KNIPGV
Trigger: CACACCTGGGATGTTCTTCAAGGAAATGCCCACCCC...TTTATATTTCCCATATGGCTTTGGGAGAGCGCCGAGAAGCCGCCATCCCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTCTCTCGCCCTCCCAACTCCCCGATCTTGCAAGCCTGCAGCGGTGCTGCAACATAGAGAGCTTTTGGTaGTCATTAACCTGGCACACA +
Preference number: 5 (lower is better)
Translates to: PLSPSQLPDLASLQRCCNIESFW*SLTWHT
Trigger: TGTGTGCCAGGTTAATGACAACCAAAAGCTCTCTAT...GTTGCAGCACCGCTGCAGGCTTGCAAGATCGGGGAGTTGGGAGGGCGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATCGCACCAGCAAGATGTaGGCGGGCAGTTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNRTSKM*AGSSST
Trigger: CGTGGACGAACTGCCCGCCAACATCTTGCTGGTGCG...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTCTCCGTTTGGGGGTTTaGGGAGAAGGCACGACCTCC +
Preference number: 5 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFLRLGV*GEGTTS
Trigger: GGAGGTCGTGCCTTCTCCCAAAACCCCCAAACGGAG...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCAACCCCCTGATCTCCTaGTACCTCTGGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCNPLIS*YLWSPA
Trigger: TGCTGGAGACCAGAGGTACAAGGAGATCAGGGGGTT...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CCTAAGGTGGCACCAACGCCCACCCGACTCTGCCCTGAAAGCGGCCAGCTGACAGTAAATAGAGAGCTTTaGGTTGTCATTAACCTGGCA +
Preference number: 5 (lower is better)
Translates to: PKVAPTPTRLCPESGQLTVNREL*VVINLA
Trigger: TGCCAGGTTAATGACAACCAAAAGCTCTCTATTTAC...TGTCAGCTGGCCGCTTTCAGGGCAGAGTCGGGTGGGCGTTGGTGCCACCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCATCTCAATGAGCTGCTaGGCGGAGTCATTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCISMSC*AESLSS
Trigger: GGAGCTCAATGACTCCGCCAAGCAGCTCATTGAGAT...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAATGCTTAAAGTGGGACTaGGGGCCACGCTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GANEYTFISPTQGGPSIKCLKWD*GPRWPQ
Trigger: CTGTGGCCAGCGTGGCCCCAAGTCCCACTTTAAGCA...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGAATGGTGCTCCGGGCTaGGCTGGCCGTTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKNGAPG*AGRWLG
Trigger: GCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCTTCTTCTCGTCTAGTTaGCATCCCGTGTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCFFSSS*HPVLVG
Trigger: CCCCACCAACACGGGATGCAAACTAGACGAGAAGAA...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp AGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAGGTGTGCTCTCACCTGGAGACTTGACTaGGTCTGGTTTCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SFHRGGGHFLEEHPRCALTWRLD*VWFPWR
Trigger: TCTCCAGGGAAACCAGACCAAGTCAAGTCTCCAGGT...GAGAGCACACCTGGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATGGGAAGATCCCGATCTaGTCTCCCAGCATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNGKIPI*SPSMPS
Trigger: GGAAGGCATGCTGGGAGACAAGATCGGGATCTTCCC...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATCGGTACATCTCTCCCTaGTGCAGCTCCAGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNRYISP*CSSSSS
Trigger: TGACGAGCTGGAGCTGCACAAGGGAGAGATGTACCG...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GGTGCTAATGAATATACATTCATCAGCCCCACTCAGGGAGGTCCCAGCATCAAACAGAGTGGGCAGCTGTaGAAATGGTGCTCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: GANEYTFISPTQGGPSIKQSGQL*KWCSGL
Trigger: AAGCCCGGAGCACCATTTCAACAGCTGCCCACTCTG...TTTGATGCTGGGACCTCCCTGAGTGGGGCTGATGAATGTATATTCATTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATAGTTTGCATCCCGTGTaGGTGGGGCTGGATGTGGAC +
Preference number: 5 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNSLHPV*VGLDVD
Trigger: GTCCACATCCAGCCCCACCAACACGGGATGCAAACT...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTTCCCCCTTGTTGAACTaGAGGTCACCAGGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGSPLLN*RSPGSF
Trigger: GAAGGAACCTGGTGACCTCAAGTTCAACAAGGGGGA...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATTGCCTGGGTGCATGGTaGTGGTTATCCCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNCLGAW*WLSLWP
Trigger: TGGCCAAAGGGATAACCACAACCATGCACCCAGGCA...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGCTCCTTCTACCGCCACACAAAAGGACAATTATAGTGGCCCTTCCTCGAAATTTTGCGGCACTGACGTaGGGAGGTGTGATGGCTGAT +
Preference number: 5 (lower is better)
Translates to: VLLLPPHKRTIIVALPRNFAALT*GGVMAD
Trigger: ATCAGCCATCACACCTCCCAACGTCAGTGCCGCAAA...ATTTCGAGGAAGGGCCACTATAATTGTCCTTTTGTGTGGCGGTAGAAGGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTTGGTCTGGTTTCCCTGGAGAACACCTGCGTCATCCAGGTTGTTGATCTGTGCGGTGAACAGAAAGTGTaGCTTATACTACTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: LGLVSLENTCVIQVVDLCGEQKV*LILLAG
Trigger: GCCTGCCAGTAGTATAAGCAACACTTTCTGTTCACC...GCACAGATCAACAACCTGGATGACGCAGGTGTTCTCCAGGGAAACCAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GTGTGTGTGAACTGTGCAAAGTACAAAGGATCTCCCAGTCGGCTGAGCCTGTTTAACACGCACAGGATTTaGGTGCAGGATGGGCAACTG +
Preference number: 5 (lower is better)
Translates to: VCVNCAKYKGSPSRLSLFNTHRI*VQDGQL
Trigger: CAGTTGCCCATCCTGCACCAAAATCCTGTGCGTGTT...AAACAGGCTCAGCCGACTGGGAGATCCTTTGTACTTTGCACAGTTCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCCCTGCGTCATCCAGGTaGTTGATCTGTGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPPASSR*LICAPL
Trigger: AAGAGGTGCACAGATCAACAACCTGGATGACGCAGG...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp TGCTTTCTTTGCAGTTTCCACAGAGGGGGTGGGCATTTCCTTGAAGAACATCCCAATAAAGGGAAGATTTaGCCTTCCCGGCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: CFLCSFHRGGGHFLEEHPNKGKI*PSRLGL
Trigger: CAACCCCAGCCGGGAAGGCAAAATCTTCCCTTTATT...GGGATGTTCTTCAAGGAAATGCCCACCCCCTCTGTGGAAACTGCAAAGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp GAAAGTGTTGCTTATACTACTGGCAGGCGACAAGCCCACAGATTCTGCTCTGGTCAGACAGTCCTTGTCTaGGTCTTTGTCCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: ESVAYTTGRRQAHRFCSGQTVLV*VFVLHL
Trigger: GAGATGAAGGACAAAGACCAAGACAAGGACTGTCTG...ACCAGAGCAGAATCTGTGGGCTTGTCGCCTGCCAGTAGTATAAGCAACACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGATGATGTCCCCCTTGTaGAACTTGAGGTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKMMSPL*NLRSPG
Trigger: ACCTGGTGACCTCAAGTTCAACAAGGGGGACATCAT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGACTCTATTCTGTTGCTaGGTACCTGCGCGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKTLFCC*VPARLK
Trigger: TTTAAGGCGCGCAGGTACCAAGCAACAGAATAGAGT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS-3UTR CAA 90 bp CTGGAAGTAACAAGTAGCCAAGTCACGTCCCAAAACAGGAACTCTGAAAATAAGAATGTATTTCTGGAATaGGTTACATCCCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: LEVTSSQVTSQNRNSENKNVFLE*VTSLKT
Trigger: GGTTTTCAGGGATGTAACCAATTCCAGAAATACATT...CTTATTTTCAGAGTTCCTGTTTTGGGACGTGACTTGGCTACTTGTTACTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GGGCTGTGGCGGTGCGAAGTGGCTCACCGACCGGCCTaGGTGGCGGGGACCGGCCTGCGTGGCGGGGACCGG +
Preference number: 6 (lower is better)
Translates to: GLWRCEVAHRPA*VAGTGLRGGDR
Trigger: CCGGTCCCCGCCACGCAGGCCGGTCCCCGCCACGCAGGCCGGTCGGTGAGCCACTTCGCACCGCCACAGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 72 bp CGTGGCGGGGACCGGCCAGCCGAGCCCGCCCAGTCCTaGGCGCAGCGCCTGCGGCTGCGGGCTACACCTGTC +
Preference number: 6 (lower is better)
Translates to: RGGDRPAEPAQS*AQRLRLRATPV
Trigger: GACAGGTGTAGCCCGCAGCCGCAGGCGCTGCGCTCAGGACTGGGCGGGCTCGGCTGGCCGGTCCCCGCCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CCGAGCCCGCCCAGTCCTGAGCGCAGCGCCTGCGGCTaGGGGCTACACCTGTCCCGCCGCAAGTCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: PSPPSPERSACG*GLHLSRRKSAP
Trigger: CGGGGCGGACTTGCGGCGGGACAGGTGTAGCCCGCAGCCGCAGGCGCTGCGCTCAGGACTGGGCGGGCTCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GGCCAGCCGAGCCCGCCCAGTCCTGAGCGCAGCGCCTaGGGCTGCGGGCTACACCTGTCCCGCCGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: GQPSPPSPERSA*GCGLHLSRRKS
Trigger: GGACTTGCGGCGGGACAGGTGTAGCCCGCAGCCGCAGGCGCTGCGCTCAGGACTGGGCGGGCTCGGCTGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CCGGCGCGGTCCTGCTGGTCGCCAGCTCCCGCAGACTaGCGGCGGTGCTGCCCGCGGCCGCGGAGAGGAAAA +
Preference number: 6 (lower is better)
Translates to: PARSCWSPAPAD*RRCCPRPRRGK
Trigger: TTTTCCTCTCCGCGGCCGCGGGCAGCACCGCCGGCAGTCTGCGGGAGCTGGCGACCAGCAGGACCGCGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp ACCCCGGCTGGTGGCCCGATGCTAGGGCTGTGGCGGTaGGAAGTGGCTCACCGACCGGCCTGCGTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: TPAGGPMLGLWR*EVAHRPACVAG
Trigger: CCCCGCCACGCAGGCCGGTCGGTGAGCCACTTCGCACCGCCACAGCCCTAGCATCGGGCCACCAGCCGGGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CGTCGCTCGCCTGGCCTGTCCTCGTCGCCCTCGCTCTaGGCAGCAGCGGCGGCCGCCTTGGATGCGCACAGC +
Preference number: 6 (lower is better)
Translates to: RRSPGLSSSPSL*AAAAAALDAHS
Trigger: GCTGTGCGCATCCAAGGCGGCCGCCGCTGCTGCGCAGAGCGAGGGCGACGAGGACAGGCCAGGCGAGCGACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CGCCGGGGCTGGTGCCCGCGCGGGGCCGCTGACGGATaGCGTCCAGCAGTCGCACCAGCAAGATGTTGGCGG +
Preference number: 6 (lower is better)
Translates to: RRGWCPRGAADG*RPAVAPARCWR
Trigger: CCGCCAACATCTTGCTGGTGCGACTGCTGGACGGCATCCGTCAGCGGCCCCGCGCGGGCACCAGCCCCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GCCCTCGCTCTGCGCAGCAGCGGCGGCCGCCTTGGATaGGCACAGCCAGGACGCTCCGAGCAGCATGGGGGA +
Preference number: 6 (lower is better)
Translates to: ALALRSSGGRLG*AQPGRSEQHGG
Trigger: TCCCCCATGCTGCTCGGAGCGTCCTGGCTGTGCGCATCCAAGGCGGCCGCCGCTGCTGCGCAGAGCGAGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CCCACCAGGATGCGGCACTCGGGGCAGCGCAGCTCGTaGCGCGAGCACACGATGCTCTCCAGGCAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PTRMRHSGQRSS*REHTMLSRQRR
Trigger: CCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCGCCACGAGCTGCGCTGCCCCGAGTGCCGCATCCTGGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GCAGGCAGGGATTCTTTGCCGCCGGCGCGGTCCTGCTaGTCGCCAGCTCCCGCAGACTGCCGGCGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: AGRDSLPPARSC*SPAPADCRRCC
Trigger: GCAGCACCGCCGGCAGTCTGCGGGAGCTGGCGACCAGCAGGACCGCGCCGGCGGCAAAGAATCCCTGCCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GAAGCAGGCAGGGATTCTTTGCCGCCGGCGCGGTCCTaGTGGTCGCCAGCTCCCGCAGACTGCCGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: EAGRDSLPPARS*WSPAPADCRRC
Trigger: GCACCGCCGGCAGTCTGCGGGAGCTGGCGACCAGCAGGACCGCGCCGGCGGCAAAGAATCCCTGCCTGCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GGCGTGGAGCCCGCCACCGGCAGCCAGCATCAGGACTaGGGAGCCGGGCTCCGCCGTGACTTTCTTCACCCC +
Preference number: 6 (lower is better)
Translates to: GVEPATGSQHQD*GAGLRRDFLHP
Trigger: GGGGTGAAGAAAGTCACGGCGGAGCCCGGCTCCCCAGTCCTGATGCTGGCTGCCGGTGGCGGGCTCCACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GCCGGGCTCCGCCGTGACTTTCTTCACCCCGGCTGGTaGCCCGATGCTAGGGCTGTGGCGGTGCGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: AGLRRDFLHPGW*PDARAVAVRSG
Trigger: GCCACTTCGCACCGCCACAGCCCTAGCATCGGGCCACCAGCCGGGGTGAAGAAAGTCACGGCGGAGCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 72 bp AGGCAGGCGGGATGGAGAGTTCTGGGTGCGCAGGGGTaGCACGGTGGCAGTTGGCCGGTCCTGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: RQAGWRVLGAQG*HGGSWPVLSLG
Trigger: GCCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAGAACTCTCCATCCCGCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp ACGTTGAGGGGCAGCTGGACCTTGGGAGGCGTGCCCTaGTCTCCAGACACCGAGGCAGCCCGTGGGACAGCC +
Preference number: 6 (lower is better)
Translates to: TLRGSWTLGGVP*SPDTEAARGTA
Trigger: GGCTGTCCCACGGGCTGCCTCGGTGTCTGGAGAGCAGGGCACGCCTCCCAAGGTCCAGCTGCCCCTCAACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GTGCTCCGGGCTTGGCTGGCCGTTGGCTGGGCTGAGTaGCGTAGACAGCTGCCTGTTGGGGGCGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: VLRAWLAVGWAE*RRQLPVGGEAV
Trigger: CACAGCCTCGCCCCCAACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GGAGCCGGGCTCCGCCGTGACTTTCTTCACCCCGGCTaGTGGCCCGATGCTAGGGCTGTGGCGGTGCGAAGT +
Preference number: 6 (lower is better)
Translates to: GAGLRRDFLHPG*WPDARAVAVRS
Trigger: ACTTCGCACCGCCACAGCCCTAGCATCGGGCCACCAGCCGGGGTGAAGAAAGTCACGGCGGAGCCCGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CTGAGGCTGGTGGCAGGCAGGCGGGATGGAGAGTTCTaGGTGCGCAGGGGTGACACGGTGGCAGTTGGCCGG +
Preference number: 6 (lower is better)
Translates to: LRLVAGRRDGEF*VRRGDTVAVGR
Trigger: CCGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAGAACTCTCCATCCCGCCTGCCTGCCACCAGCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CCCACTGCACCTTGGAGCAGGGCGTCCACGGCCACCTaGGGGTCGTGGGTTGGAGACACAGATGGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: PTAPWSRASTAT*GSWVGDTDGGE
Trigger: CTCCCCGCCATCTGTGTCTCCAACCCACGACCCCCAGGTGGCCGTGGACGCCCTGCTCCAAGGTGCAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp ACTCGGGGCAGCGCAGCTCGTGGCGCGAGCACACGATaGTCTCCAGGCAGCGGCGGCAGAAAGTGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: TRGSAARGASTR*SPGSGGRKCVG
Trigger: GCCAACACACTTTCTGCCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCGCCACGAGCTGCGCTGCCCCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp AAGCTGCCCGGGAAGAGGCCTGTGCGGCCGTTCCGCTaGAGGGTCCCCTTGTACCAGCCGTCCTCACGCTTC +
Preference number: 6 (lower is better)
Translates to: KLPGKRPVRPFR*RVPLYQPSSRF
Trigger: GAAGCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CCTTGGAGCAGGGCGTCCACGGCCACCTGGGGGTCGTaGGTTGGAGACACAGATGGCGGGGAGCGTGACTTC +
Preference number: 6 (lower is better)
Translates to: PWSRASTATWGS*VGDTDGGERDF
Trigger: GAAGTCACGCTCCCCGCCATCTGTGTCTCCAACCCACGACCCCCAGGTGGCCGTGGACGCCCTGCTCCAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp ATGGACAGTGAGGACACTTCGGGGCCCACTGCACCTTaGAGCAGGGCGTCCACGGCCACCTGGGGGTCGTGG +
Preference number: 6 (lower is better)
Translates to: MDSEDTSGPTAP*SRASTATWGSW
Trigger: CCACGACCCCCAGGTGGCCGTGGACGCCCTGCTCCAAGGTGCAGTGGGCCCCGAAGTGTCCTCACTGTCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp AGAAGCTCTCGACGAAGCTGCCCGGGAAGAGGCCTGTaGGGCCGTTCCGCTGCAGGGTCCCCTTGTACCAGC +
Preference number: 6 (lower is better)
Translates to: RSSRRSCPGRGL*GRSAAGSPCTS
Trigger: GCTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAGCTTCGTCGAGAGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GCTGGGAGGAAGCCCTGTGTGCCGTGCAGCTCGCCGTaGTACCACTGTTCATCCACCTTGCGCCGCAGGACG +
Preference number: 6 (lower is better)
Translates to: AGRKPCVPCSSP*YHCSSTLRRRT
Trigger: CGTCCTGCGGCGCAAGGTGGATGAACAGTGGTACCACGGCGAGCTGCACGGCACACAGGGCTTCCTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GGGATGGAGAGTTCTGGGTGCGCAGGGGTGACACGGTaGCAGTTGGCCGGTCCTGAGCCTGGGCTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: GMESSGCAGVTR*QLAGPEPGLQS
Trigger: ACTCTGCAGCCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAGAACTCTCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp ACCTCTCTCTGGGCAACAGCTTGGGCTCGGGGCGGATaGCAGCCATGGACAGCGGAGCTTGCCGGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: TSLWATAWARGG*QPWTAELAGKE
Trigger: CTCCTTCCCGGCAAGCTCCGCTGTCCATGGCTGCCATCCGCCCCGAGCCCAAGCTGTTGCCCAGAGAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp AGACCACCACGCGGTACCTCTCTCTGGGCAACAGCTTaGGCTCGGGGCGGATGGCAGCCATGGACAGCGGAG +
Preference number: 6 (lower is better)
Translates to: RPPRGTSLWATA*ARGGWQPWTAE
Trigger: CTCCGCTGTCCATGGCTGCCATCCGCCCCGAGCCCAAGCTGTTGCCCAGAGAGAGGTACCGCGTGGTGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp GAGACCACCACGCGGTACCTCTCTCTGGGCAACAGCTaGGGCTCGGGGCGGATGGCAGCCATGGACAGCGGA +
Preference number: 6 (lower is better)
Translates to: ETTTRYLSLGNS*GSGRMAAMDSG
Trigger: TCCGCTGTCCATGGCTGCCATCCGCCCCGAGCCCAAGCTGTTGCCCAGAGAGAGGTACCGCGTGGTGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp GCGCGAGCACACGATGCTCTCCAGGCAGCGGCGGCAGAAAGTGTGTaGGCATGGCAGCACCTTGGCCGTGGTGTCCAGGCGCTCCAGACA +
Preference number: 6 (lower is better)
Translates to: ARAHDALQAAAAESV*AWQHLGRGVQALQT
Trigger: TGTCTGGAGCGCCTGGACACCACGGCCAAGGTGCTGCCATGCCAACACACTTTCTGCCGCCGCTGCCTGGAGAGCATCGTGTGCTCGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp CAGAGTGGGCAGCTGTTGAAATGGTGCTCCGGGCTTGGCTGGCCGTaGGCTGGGCTGAGTGCCGTAGACAGCTGCCTGTTGGGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: QSGQLLKWCSGLGWP*AGLSAVDSCLLGAR
Trigger: CCTCGCCCCCAACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTGCCCACTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp GGCGGGATGGAGAGTTCTGGGTGCGCAGGGGTGACACGGTGGCAGTaGGCCGGTCCTGAGCCTGGGCTGCAGAGTGGGCAGCTGTTGAAA +
Preference number: 6 (lower is better)
Translates to: GGMESSGCAGVTRWQ*AGPEPGLQSGQLLK
Trigger: TTTCAACAGCTGCCCACTCTGCAGCCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGCGCACCCAGAACTCTCCATCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 72 bp GTGCGCAGGGGTGACACGGTGGCAGTTGGCCGGTCCTaGGCCTGGGCTGCAGAGTGGGCAGCTGTTGAAATG +
Preference number: 6 (lower is better)
Translates to: VRRGDTVAVGRS*AWAAEWAAVEM
Trigger: CATTTCAACAGCTGCCCACTCTGCAGCCCAGGCTCAGGACCGGCCAACTGCCACCGTGTCACCCCTGCGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp TGGAGACCCTCCGACTACATTATTCCGGGGCGGCCCTaGCCCTCCTGCAGGCACCCTGGAAACGGGTGTCAC +
Preference number: 6 (lower is better)
Translates to: WRPSDYIIPGRP*PSCRHPGNGCH
Trigger: GTGACACCCGTTTCCAGGGTGCCTGCAGGAGGGGCAGGGCCGCCCCGGAATAATGTAGTCGGAGGGTCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CCTGCATCTCGCTCTCTATGGGGCAGGACCCTGCCCTaGCGTGGATGGACAGTGAGGACACTTCGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PASRSLWGRTLP*RGWTVRTLRGP
Trigger: TGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCGAGATGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GCCTTCCTGTGCAGAGGCTCCATCCCCATGGCACCCTaGATCTCGCTCTCTATGGGGCAGGACCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: AFLCRGSIPMAP*ISLSMGQDPAL
Trigger: CAGGGCAGGGTCCTGCCCCATAGAGAGCGAGATGCAGGGTGCCATGGGGATGGAGCCTCTGCACAGGAAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CAGGGAGCACCAGTTCTCAGAAGCTCTCGACGAAGCTaGCCGGGAAGAGGCCTGTGCGGCCGTTCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: QGAPVLRSSRRS*PGRGLCGRSAA
Trigger: TGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAGCTTCGTCGAGAGCTTCTGAGAACTGGTGCTCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp AGCGGCGGCAGAAAGTGTGTTGGCATGGCAGCACCTTaGCCGTGGTGTCCAGGCGCTCCAGACACACGGAGC +
Preference number: 6 (lower is better)
Translates to: SGGRKCVGMAAP*PWCPGAPDTRS
Trigger: GCTCCGTGTGTCTGGAGCGCCTGGACACCACGGCCAAGGTGCTGCCATGCCAACACACTTTCTGCCGCCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp ACGATGCTCTCCAGGCAGCGGCGGCAGAAAGTGTGTTaGCATGGCAGCACCTTGGCCGTGGTGTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: TMLSRQRRQKVC*HGSTLAVVSRR
Trigger: GCGCCTGGACACCACGGCCAAGGTGCTGCCATGCCAACACACTTTCTGCCGCCGCTGCCTGGAGAGCATCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GTTGAAATGGTGCTCCGGGCTTGGCTGGCCGTTGGCTaGGCTGAGTGCCGTAGACAGCTGCCTGTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: VEMVLRAWLAVG*AECRRQLPVGG
Trigger: GCCCCCAACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CGCTCTCTATGGGGCAGGACCCTGCCCTGCCGTGGATaGACAGTGAGGACACTTCGGGGCCCACTGCACCTT +
Preference number: 6 (lower is better)
Translates to: RSLWGRTLPCRG*TVRTLRGPLHL
Trigger: AAGGTGCAGTGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GCTCCATCCCCATGGCACCCTGCATCTCGCTCTCTATaGGGCAGGACCCTGCCCTGCCGTGGATGGACAGTG +
Preference number: 6 (lower is better)
Translates to: APSPWHPASRSL*GRTLPCRGWTV
Trigger: CACTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCGAGATGCAGGGTGCCATGGGGATGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CGTGGAGCTTCCCAGGCGGCCTCCCCCTCTGTGAGCTaGGTGCAGGGAGCACCAGTTCTCAGAAGCTCTCGA +
Preference number: 6 (lower is better)
Translates to: RGASQAASPSVS*VQGAPVLRSSR
Trigger: TCGAGAGCTTCTGAGAACTGGTGCTCCCTGCACCCAGCTCACAGAGGGGGAGGCCGCCTGGGAAGCTCCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp CAGCGGCGGCAGAAAGTGTGTTGGCATGGCAGCACCTaGGCCGTGGTGTCCAGGCGCTCCAGACACACGGAG +
Preference number: 6 (lower is better)
Translates to: QRRQKVCWHGST*AVVSRRSRHTE
Trigger: CTCCGTGTGTCTGGAGCGCCTGGACACCACGGCCAAGGTGCTGCCATGCCAACACACTTTCTGCCGCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp CTGCCCGGGAAGAGGCCTGTGCGGCCGTTCCGCTGCAGGGTCCCCTaGTACCAGCCGTCCTCACGCTTCTTGTGCACAAAGACGATGTCG +
Preference number: 6 (lower is better)
Translates to: LPGKRPVRPFRCRVP*YQPSSRFLCTKTMS
Trigger: CGACATCGTCTTTGTGCACAAGAAGCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTTCCCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp AGTGGGCAGCTGTTGAAATGGTGCTCCGGGCTTGGCTaGCCGTTGGCTGGGCTGAGTGCCGTAGACAGCTGC +
Preference number: 6 (lower is better)
Translates to: SGQLLKWCSGLG*PLAGLSAVDSC
Trigger: GCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTGCCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GCAGAGTGGGCAGCTGTTGAAATGGTGCTCCGGGCTTaGCTGGCCGTTGGCTGGGCTGAGTGCCGTAGACAG +
Preference number: 6 (lower is better)
Translates to: AEWAAVEMVLRA*LAVGWAECRRQ
Trigger: CTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTGCCCACTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp ATCTCGCTCTCTATGGGGCAGGACCCTGCCCTGCCGTaGATGGACAGTGAGGACACTTCGGGGCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: ISLSMGQDPALP*MDSEDTSGPTA
Trigger: TGCAGTGGGCCCCGAAGTGTCCTCACTGTCCATCCACGGCAGGGCAGGGTCCTGCCCCATAGAGAGCGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp AGGAGCCTGCCTTCCTGTGCAGAGGCTCCATCCCCATaGCACCCTGCATCTCGCTCTCTATGGGGCAGGACC +
Preference number: 6 (lower is better)
Translates to: RSLPSCAEAPSP*HPASRSLWGRT
Trigger: GGTCCTGCCCCATAGAGAGCGAGATGCAGGGTGCCATGGGGATGGAGCCTCTGCACAGGAAGGCAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp CAGCTGTTGAAATGGTGCTCCGGGCTTGGCTGGCCGTaGGCTGGGCTGAGTGCCGTAGACAGCTGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: QLLKWCSGLGWP*AGLSAVDSCLL
Trigger: CAACAGGCAGCTGTCTACGGCACTCAGCCCAGCCAACGGCCAGCCAAGCCCGGAGCACCATTTCAACAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp AAGAGGCCTGTGCGGCCGTTCCGCTGCAGGGTCCCCTaGTACCAGCCGTCCTCACGCTTCTTGTGCACAAAG +
Preference number: 6 (lower is better)
Translates to: KRPVRPFRCRVP*YQPSSRFLCTK
Trigger: CTTTGTGCACAAGAAGCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAACGGCCGCACAGGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp GAGGGCAGGGAGGCATTGCAGCTGGATGCAGCGGCTGGGCATGGCTaGTCCATCTCAATGAGCTGCTTGGCGGAGTCATTGAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: EGREALQLDAAAGHG*SISMSCLAESLSST
Trigger: CGTGGAGCTCAATGACTCCGCCAAGCAGCTCATTGAGATGGACAAGCCATGCCCAGCCGCTGCATCCAGCTGCAATGCCTCCCTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp CCGTTCCGCTGCAGGGTCCCCTTGTACCAGCCGTCCTCACGCTTCTaGTGCACAAAGACGATGTCGCCTTCCTTCAGCTCGATCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PFRCRVPLYQPSSRF*CTKTMSPSFSSISA
Trigger: GGCGGAGATCGAGCTGAAGGAAGGCGACATCGTCTTTGTGCACAAGAAGCGTGAGGACGGCTGGTACAAGGGGACCCTGCAGCGGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 72 bp CCGGTCCTCAGAGACGCCCCCTTGAACCAGCCATCCTaGCACTTCTCGAGGACCCGGTACATCTCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: PVLRDAPLNQPS*HFSRTRYISPL
Trigger: CAAGGGAGAGATGTACCGGGTCCTCGAGAAGTGTCAGGATGGCTGGTTCAAGGGGGCGTCTCTGAGGACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp CACCAGGTTCCTTCCCCTCGTAGCTGTAGAGGGCCTTaGCATAGGGAAGCAGGCAGGGATTCTTTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: HQVPSPRSCRGP*HREAGRDSLPP
Trigger: CGGCGGCAAAGAATCCCTGCCTGCTTCCCTATGGCAAGGCCCTCTACAGCTACGAGGGGAAGGAACCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GGCCGCGGCTCGGGGATCGCTGGAGCTGATCAACACTaGAGCACTAATTTCCATGGAATGCCTGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GRGSGIAGADQH*STNFHGMPVAG
Trigger: GCCAGCCACAGGCATTCCATGGAAATTAGTGCTCCAGTGTTGATCAGCTCCAGCGATCCCCGAGCCGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp ATGTCGCCTTCCTTCAGCTCGATCTCCGCCTCACTCTaGGGTGGGTACGAGACCACCACGCGGTACCTCTCT +
Preference number: 6 (lower is better)
Translates to: MSPSFSSISASL*GGYETTTRYLS
Trigger: AGAGAGGTACCGCGTGGTGGTCTCGTACCCACCCCAGAGTGAGGCGGAGATCGAGCTGAAGGAAGGCGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp CCGTGCAGCTCGCCGTGGTACCACTGTTCATCCACCTaGCGCCGCAGGACGATGATGTCCCCCTTGTTGAAC +
Preference number: 6 (lower is better)
Translates to: PCSSPWYHCSST*RRRTMMSPLLN
Trigger: GTTCAACAAGGGGGACATCATCGTCCTGCGGCGCAAGGTGGATGAACAGTGGTACCACGGCGAGCTGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp GCGGCTGGGCATGGCTTGTCCATCTCAATGAGCTGCTaGGCGGAGTCATTGAGCTCCACGTACAGGAGCGGG +
Preference number: 6 (lower is better)
Translates to: AAGHGLSISMSC*AESLSSTYRSG
Trigger: CCCGCTCCTGTACGTGGAGCTCAATGACTCCGCCAAGCAGCTCATTGAGATGGACAAGCCATGCCCAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp CCTCCAGCCTCCCCGTTGAGGTTTGCGGCACTGACGTaGGGAGGTGTGATGGCTGATGCTGCTGATGTGAGG +
Preference number: 6 (lower is better)
Translates to: PPASPLRFAALT*GGVMADAADVR
Trigger: CCTCACATCAGCAGCATCAGCCATCACACCTCCCAACGTCAGTGCCGCAAACCTCAACGGGGAGGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp CCCTGTGTGCCGTGCAGCTCGCCGTGGTACCACTGTTCATCCACCTaGCGCCGCAGGACGATGATGTCCCCCTTGTTGAACTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: PCVPCSSPWYHCSST*RRRTMMSPLLNLRS
Trigger: TGACCTCAAGTTCAACAAGGGGGACATCATCGTCCTGCGGCGCAAGGTGGATGAACAGTGGTACCACGGCGAGCTGCACGGCACACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp CTGCTCAGACTCCCACTGCCTGGGTGCATGGTTGTGGTTATCCCTTaGGCCAGTGGAGACCCTCCGACTACATTATTCCGGGGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: LLRLPLPGCMVVVIP*ASGDPPTTLFRGGP
Trigger: AGGGCCGCCCCGGAATAATGTAGTCGGAGGGTCTCCACTGGCCAAAGGGATAACCACAACCATGCACCCAGGCAGTGGGAGTCTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp TGCACTGGATATAGCTGGCTGGGAGGAAGCCCTGTGTaGCGTGCAGCTCGCCGTGGTACCACTGTTCATCCA +
Preference number: 6 (lower is better)
Translates to: CTGYSWLGGSPV*RAARRGTTVHP
Trigger: TGGATGAACAGTGGTACCACGGCGAGCTGCACGGCACACAGGGCTTCCTCCCAGCCAGCTATATCCAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GCAGCGGCTGGGCATGGCTTGTCCATCTCAATGAGCTaGTTGGCGGAGTCATTGAGCTCCACGTACAGGAGC +
Preference number: 6 (lower is better)
Translates to: AAAGHGLSISMS*LAESLSSTYRS
Trigger: GCTCCTGTACGTGGAGCTCAATGACTCCGCCAAGCAGCTCATTGAGATGGACAAGCCATGCCCAGCCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 90 bp GGGTCGTGGGTTGGAGACACAGATGGCGGGGAGCGTGACTTCTTCTaGGTGGATGCTCCGGCTAGAAGCTTCAGGAGCCCACTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GSWVGDTDGGERDFF*VDAPARSFRSPLFF
Trigger: GAAGAAGAGTGGGCTCCTGAAGCTTCTAGCCGGAGCATCCACCAAGAAGAAGTCACGCTCCCCGCCATCTGTGTCTCCAACCCACGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 72 bp TGTTCTTCTTGCCATCCACACGCCGCTGAAAGGCACTaGCCGCCCCTGAGCTGCTTAAAGTGGGACTTGGGG +
Preference number: 6 (lower is better)
Translates to: CSSCHPHAAERH*PPLSCLKWDLG
Trigger: CCCCAAGTCCCACTTTAAGCAGCTCAGGGGCGGTCAGTGCCTTTCAGCGGCGTGTGGATGGCAAGAAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GCACTAATTTCCATGGAATGCCTGTGGCTGGCAGCCTaGGAGGATCTGTGCGTCACACTGAGCGCGGTGAAG +
Preference number: 6 (lower is better)
Translates to: ALISMECLWLAA*EDLCVTLSAVK
Trigger: CTTCACCGCGCTCAGTGTGACGCACAGATCCTCCCAGGCTGCCAGCCACAGGCATTCCATGGAAATTAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp GAGACACAGATGGCGGGGAGCGTGACTTCTTCTTGGTaGATGCTCCGGCTAGAAGCTTCAGGAGCCCACTCT +
Preference number: 6 (lower is better)
Translates to: ETQMAGSVTSSW*MLRLEASGAHS
Trigger: AGAGTGGGCTCCTGAAGCTTCTAGCCGGAGCATCCACCAAGAAGAAGTCACGCTCCCCGCCATCTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp TTGGAGACACAGATGGCGGGGAGCGTGACTTCTTCTTaGTGGATGCTCCGGCTAGAAGCTTCAGGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: LETQMAGSVTSS*WMLRLEASGAH
Trigger: GTGGGCTCCTGAAGCTTCTAGCCGGAGCATCCACCAAGAAGAAGTCACGCTCCCCGCCATCTGTGTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp GTTGGAGACACAGATGGCGGGGAGCGTGACTTCTTCTaGGTGGATGCTCCGGCTAGAAGCTTCAGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: VGDTDGGERDFF*VDAPARSFRSP
Trigger: TGGGCTCCTGAAGCTTCTAGCCGGAGCATCCACCAAGAAGAAGTCACGCTCCCCGCCATCTGTGTCTCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp AGGGTCCCCTTGTACCAGCCGTCCTCACGCTTCTTGTaGACAAAGACGATGTCGCCTTCCTTCAGCTCGATC +
Preference number: 6 (lower is better)
Translates to: RVPLYQPSSRFL*TKTMSPSFSSI
Trigger: GATCGAGCTGAAGGAAGGCGACATCGTCTTTGTGCACAAGAAGCGTGAGGACGGCTGGTACAAGGGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp TCCCACTGCCTGGGTGCATGGTTGTGGTTATCCCTTTaGCCAGTGGAGACCCTCCGACTACATTATTCCGGG +
Preference number: 6 (lower is better)
Translates to: SHCLGAWLWLSL*PVETLRLHYSG
Trigger: CCCGGAATAATGTAGTCGGAGGGTCTCCACTGGCCAAAGGGATAACCACAACCATGCACCCAGGCAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp CACTTTTCTTCTCGTCTAGTTTGCATCCCGTGTTGGTaGGGCTGGATGTGGACAGAACACCGATGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: HFSSRLVCIPCW*GWMWTEHRWAP
Trigger: GGGGGCCCATCGGTGTTCTGTCCACATCCAGCCCCACCAACACGGGATGCAAACTAGACGAGAAGAAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CAA 72 bp CTCCCACTGCCTGGGTGCATGGTTGTGGTTATCCCTTaGGCCAGTGGAGACCCTCCGACTACATTATTCCGG +
Preference number: 6 (lower is better)
Translates to: LPLPGCMVVVIP*ASGDPPTTLFR
Trigger: CCGGAATAATGTAGTCGGAGGGTCTCCACTGGCCAAAGGGATAACCACAACCATGCACCCAGGCAGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS TCA 72 bp CGTTTCTTGGTGTTCTTCTTGCCATCCACACGCCGCTaGAAGGCACTGACCGCCCCTGAGCTGCTTAAAGTG +
Preference number: 6 (lower is better)
Translates to: RFLVFFLPSTRR*KALTAPELLKV
Trigger: CACTTTAAGCAGCTCAGGGGCGGTCAGTGCCTTTCAGCGGCGTGTGGATGGCAAGAAGAACACCAAGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS GCA 72 bp GAGCTGATCAACACTGGAGCACTAATTTCCATGGAATaGCTGTGGCTGGCAGCCTGGGAGGATCTGTGCGTC +
Preference number: 6 (lower is better)
Translates to: ELINTGALISME*LWLAAWEDLCV
Trigger: GACGCACAGATCCTCCCAGGCTGCCAGCCACAGGCATTCCATGGAAATTAGTGCTCCAGTGTTGATCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309415.8
CDS CCA 72 bp TTTCACTTTTCTTCTCGTCTAGTTTGCATCCCGTGTTaGTGGGGCTGGATGTGGACAGAACACCGATGGGCC +
Preference number: 6 (lower is better)
Translates to: FHFSSRLVCIPC*WGWMWTEHRWA
Trigger: GGCCCATCGGTGTTCTGTCCACATCCAGCCCCACCAACACGGGATGCAAACTAGACGAGAAGAAAAGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309415.8