RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3RF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154447

Ensembl transcript IDs: ENST00000284637.14, ENST00000502315.1, ENST00000508685.1, ENST00000510806.1, ENST00000511421.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCCAGAGGGGCACTGGCTCGACTGATACTGATGGCAGCAGTGTaGGTGGCTGAGCCTGGCATCAGAGGCGCAGGTTGTGGGGAGGCC +
Preference number: 1 (lower is better)
Translates to: QARGALARLILMAAV*VAEPGIRGAGCGEA
Trigger: GGCCTCCCCACAACCTGCGCCTCTGATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp GACAGGCCCACAGATGCAGGGCTGAGGCCGGCGGCATTCTGTACCTaGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCT +
Preference number: 1 (lower is better)
Translates to: DRPTDAGLRPAAFCT*MGVTAAVGRSWLCA
Trigger: AGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR TCA 90 bp AGGGGCACTGGCTCGACTGATACTGATGGCAGCAGTGTGCGTGGCTaGGCCTGGCATCAGAGGCGCAGGTTGTGGGGAGGCCAGCGAGTG +
Preference number: 1 (lower is better)
Translates to: RGTGSTDTDGSSVRG*AWHQRRRLWGGQRV
Trigger: CACTCGCTGGCCTCCCCACAACCTGCGCCTCTGATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 90 bp ACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTaGCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCC +
Preference number: 1 (lower is better)
Translates to: TPSHAISLELLGRPS*RGRTDHGHSPTCLA
Trigger: GGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 90 bp AGGGCTGAGGCCGGCGGCATTCTGTACCTGGATGGGTGTCACTGCTaGCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGC +
Preference number: 1 (lower is better)
Translates to: RAEAGGILYLDGCHC*RGAFLVVRCNCPHS
Trigger: GCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 90 bp TGCAGGGCTGAGGCCGGCGGCATTCTGTACCTGGATGGGTGTCACTaGTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCAC +
Preference number: 1 (lower is better)
Translates to: CRAEAGGILYLDGCH*CRGAFLVVRCNCPH
Trigger: GTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp GGGACAACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTaGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCC +
Preference number: 1 (lower is better)
Translates to: GTTLGLPATPFPWSF*AGPPAVEGLTMVTP
Trigger: GGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp ACAGCTGCGGGGACAACACTGGGACTCCCAGCCACGCCATTTCCCTaGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATG +
Preference number: 1 (lower is better)
Translates to: TAAGTTLGLPATPFP*SFWAGPPAVEGLTM
Trigger: CATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp TTGTCTGGATGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTaGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: LSGCELLIPQLRGQH*DSQPRHFPGASGQA
Trigger: GGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp CGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCATTGCGGGCCTaGTTGACTGTCATTTGCCCCGTCATGTGCAACAAGACCTTAGCC +
Preference number: 1 (lower is better)
Translates to: RSWLCAATVLTALRA*LTVICPVMCNKTLA
Trigger: GGCTAAGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp TTGCTGAACTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTaGGGAGTCCAGGGAGAACGGTCACTATCCGGCCACTGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: LLNCSHKLMKHCQEM*GVQGERSLSGHWAQ
Trigger: CTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGTTCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 90 bp CCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTaGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTC +
Preference number: 1 (lower is better)
Translates to: PPAVEGLTMVTPRLV*PAVDIGTLAWEAFV
Trigger: GACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR TCA 90 bp CCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATaGCTGCGTGGCACCGTAATGAAATCGGTGGGAGAGGCCAATGAC +
Preference number: 1 (lower is better)
Translates to: PGCLPSFCFPDYPDP*LRGTVMKSVGEAND
Trigger: GTCATTGGCCTCTCCCACCGATTTCATTACGGTGCCACGCAGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 90 bp ACTTGTGTAGTGGCTAATGCATGCCTTAGCCAGAGAGGGAGCGAGTaGACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGGTAGAGAAG +
Preference number: 1 (lower is better)
Translates to: TCVVANACLSQRGSE*TEETLVSSGFGVEK
Trigger: CTTCTCTACCCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCTAAGGCATGCATTAGCCACTACACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 90 bp GCTGGGGTAACTGTGCTGGGGCATCAGAGTCACATACCAATCCTTTaGTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCT +
Preference number: 1 (lower is better)
Translates to: AGVTVLGHQSHIPIL*SSPDHLEVHKCALS
Trigger: AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGGTATGTGACTCTGATGCCCCAGCACAGTTACCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CCA 90 bp TATAAAAAGACAGGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTaGGCAAATTCACTCCCACCAAGCCTTCCAGAGCTCCACAGTCAC +
Preference number: 1 (lower is better)
Translates to: YKKTGSSGSCHNCKV*ANSLPPSLPELHSH
Trigger: GTGACTGTGGAGCTCTGGAAGGCTTGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCCTGTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 90 bp CATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATaGCTTAGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTC +
Preference number: 1 (lower is better)
Translates to: HKRPLSLMTCVVANA*LSQRGSECTEETLV
Trigger: GACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCTAAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 90 bp ATGACATCAAGGAATGGATATAAAAAGACAGGCTCTTCTGGATCCTaGCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAAGCCTT +
Preference number: 1 (lower is better)
Translates to: MTSRNGYKKTGSSGS*HNCKVWANSLPPSL
Trigger: AAGGCTTGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCCTGTCTTTTTATATCCATTCCTTGATGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR GCA 90 bp GTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCTGGGCAGGCCCTCCTaGCGTGGAAGGACTGACCAT +
Preference number: 2 (lower is better)
Translates to: VSLLPWGVPGCALQLSSQLGRPS*RGRTDH
Trigger: ATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAG...CTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR TCA 90 bp AGAGGGGCACTGGCTCGACTGATACTGATGGCAGCAGTGTGCGTGGCTGAGCCTGCATGGATGTCCCTTTaGACCAGCCATCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: RGALARLILMAAVCVAEPAWMSL*TSHPGS
Trigger: GCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGC...AGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR TCA 90 bp GATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAACGGTCACTATCCGGCTGCCGTGGAAGGACTaGCCATGGTCACTCCCCGAC +
Preference number: 2 (lower is better)
Translates to: DEALSGDVGSPGRTVTIRLPWKD*PWSLPD
Trigger: GTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAG...CCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR GCA 90 bp CCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTCACTCGCCCTTGTGACTGGTaGCACATAATTGCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: PWSFWAGPPAVEGLTMVTRPCDW*HIIARE
Trigger: TTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCG...AGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CCA 90 bp TGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACAGCATTGCGGGCCTaGTTGACTGTCATTTGCCCC +
Preference number: 2 (lower is better)
Translates to: CTWMGVTAAVGRSWLCAATALRA*LTVICP
Trigger: GGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGT...TGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR GCA 90 bp AACTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGACAGTGGAGCAGCTGCTaGACAGGCCAGAGGGGCACT +
Preference number: 2 (lower is better)
Translates to: NCSHKLMKHCQEMWGVQGQWSSC*TGQRGT
Trigger: AGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTG...TCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CCA 90 bp GATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAACGGTCACTATCCGGGCGGCATTCTGTACCTaGATGGGTGTCACTGCTGCC +
Preference number: 2 (lower is better)
Translates to: DEALSGDVGSPGRTVTIRAAFCT*MGVTAA
Trigger: GGCAGCAGTGACACCCATCCAGGTACAGAATGCCGC...CCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CCA 90 bp GTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGATAGGGACTTTAGCTTaGGAAGCATTTGTCACCGCC +
Preference number: 2 (lower is better)
Translates to: VSLLPWGVPGCALQLSSQIGTLA*EAFVTA
Trigger: GGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTAT...CTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 90 bp CGCTGCAACTGTCCTCACAGCATTGCGGGCCTGGTTGACTGTCATTaGCCCCGTCATGTGCAACAAGACCTTAGCCTGAGGACTTGTCTG +
Preference number: 2 (lower is better)
Translates to: RCNCPHSIAGLVDCH*PRHVQQDLSLRTCL
Trigger: CAGACAAGTCCTCAGGCTAAGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR GCA 90 bp GATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAACGGTCACTATCCGGCTGGTGCCACATAATTaGCAGGGAAAACCCCTATCT +
Preference number: 2 (lower is better)
Translates to: DEALSGDVGSPGRTVTIRLVPHN*QGKPLS
Trigger: AGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAG...CCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 90 bp CACTCCCCGACTTGTCTGGCCAGCTGTAGACATAGGGACTTTAGCTaGGGAAGCATTTGTCACCGCCCTTGTGACTGGTGCCACATAATT +
Preference number: 2 (lower is better)
Translates to: HSPTCLASCRHRDFS*GSICHRPCDWCHII
Trigger: AATTATGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR GCA 90 bp CTGGTTGACTGTCATTTGCCCCGTCATGTGCAACAAGACCTTAGCCTGAGGACTGGAAAACCCCTATCTTaGTGGTATGCATGGATGTCC +
Preference number: 2 (lower is better)
Translates to: LVDCHLPRHVQQDLSLRTGKPLS*WYAWMS
Trigger: GGACATCCATGCATACCAGCAAGATAGGGGTTTTCC...AGTCCTCAGGCTAAGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CCA 90 bp CTGGTTGACTGTCATTTGCCCCGTCATGTGCAACAAGACCTTAGCCTGAGGACTTTGAACCAGCCATCCTaGCAGCGCTCAAACACTAAA +
Preference number: 2 (lower is better)
Translates to: LVDCHLPRHVQQDLSLRTLNQPS*QRSNTK
Trigger: TTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAA...AGTCCTCAGGCTAAGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 90 bp ACTGTGGTAAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTaGTTTTCCGGACTACCCAGATCCATGACTGCGTGGCACCGTAAT +
Preference number: 2 (lower is better)
Translates to: TVVRILFITRLSSLL*FSGLPRSMTAWHRN
Trigger: ATTACGGTGCCACGCAGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTTACCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CCA 90 bp CGACTTGTCTGGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTCAAACCCCTATCTTGCTaGTATGCATGGATGTCCCTT +
Preference number: 2 (lower is better)
Translates to: RLVWPAVDIGTLAWEAFVKPLSC*YAWMSL
Trigger: AAGGGACATCCATGCATACCAGCAAGATAGGGGTTT...GACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCAGACAAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR TCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGCCTTTGCTCATCTCCTaGCCATCTGGAAGTCCACAA +
Preference number: 2 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVPLLIS*PSGSPQ
Trigger: TTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGG...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CCA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATCTTCATTCTGCTCGCTaGGGTAACTGTGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDLHSAR*GNCAGA
Trigger: TGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAG...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR TCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATTTCCAACCAAACAATTaGGCTGCTTCTGCTATAAAA +
Preference number: 2 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHFQPNN*AASAIK
Trigger: TTTTATAGCAGAAGCAGCTCAATTGTTTGGTTGGAA...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTCATCTCCTGACCATCTaGAAGTCCACAAATGTGCTC +
Preference number: 2 (lower is better)
Translates to: GHKRPLSLMTCVVANACLHLLTI*KSTNVL
Trigger: GAGCACATTTGTGGACTTCCAGATGGTCAGGAGATG...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGTTACACCTCCTGAATTaGTCAATTCTGAGTACAAAC +
Preference number: 2 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMLHLLN*SILSTN
Trigger: GTTTGTACTCAGAATTGACCAATTCAGGAGGTGTAA...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR TCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTCCCACACAATTAAATTaGGGACTAGGTCTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: GHKRPLSLMTCVVANACLPTQLN*GLGLQG
Trigger: ACCCTGAAGACCTAGTCCTCAATTTAATTGTGTGGG...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR GCA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCCTTGTGTCCTGGGCATaGAGGTCAGTTGGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCLVSWA*RSVGVK
Trigger: TTTTACCCCAACTGACCTGCATGCCCAGGACACAAG...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR GCA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCCACATACCAATCCTTTaGTCATCTCCTGACCATCTG +
Preference number: 2 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVHIPIL*SSPDHL
Trigger: CAGATGGTCAGGAGATGAGCAAAGGATTGGTATGTG...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CCA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCAATACATGCAAGACGTaGGGAAAGAATCACAATGGA +
Preference number: 2 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVNTCKT*GKNHNG
Trigger: TCCATTGTGATTCTTTCCCCACGTCTTGCATGTATT...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CAA 90 bp TTTGGGGTAGAGAAGAGAACACTGTTTATTTTTACACCTCCTGAATaGGTCAATTCTGAGTACAAACTCATCTTAACAGGAAATCGCAAT +
Preference number: 2 (lower is better)
Translates to: FGVEKRTLFIFTPPE*VNSEYKLILTGNRN
Trigger: ATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGAATTGACCAATTCAGGAGGTGTAAAAATAAACAGTGTTCTCTTCTCTACCCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR GCA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCCTCTTTCTGTTAAACTaGTTTGTGCTACTTTGTTGT +
Preference number: 2 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCLFLLN*FVLLCC
Trigger: ACAACAAAGTAGCACAAAGCAGTTTAACAGAAAGAG...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR TCA 72 bp GGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTaGCCATGGTCACTCCCCGACTTGTCTGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: GASGQALLPWKD*PWSLPDLSGQL
Trigger: CAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 72 bp GAGGCCGGCGGCATTCTGTACCTGGATGGGTGTCACTaGTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAAC +
Preference number: 3 (lower is better)
Translates to: EAGGILYLDGCH*CRGAFLVVRCN
Trigger: GTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCGCCGGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 72 bp GGGACAACACTGGGACTCCCAGCCACGCCATTTCCCTaGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: GTTLGLPATPFP*SFWAGPPAVEG
Trigger: TCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 72 bp ACAGATGCAGGGCTGAGGCCGGCGGCATTCTGTACCTaGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: TDAGLRPAAFCT*MGVTAAVGRSW
Trigger: CCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR TCA 72 bp GGCTCGACTGATACTGATGGCAGCAGTGTGCGTGGCTaGGCCTGGCATCAGAGGCGCAGGTTGTGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: GSTDTDGSSVRG*AWHQRRRLWGG
Trigger: GCCTCCCCACAACCTGCGCCTCTGATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 72 bp CACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTaGCGTGGAAGGACTGACCATGGTCACTCCCCGACT +
Preference number: 3 (lower is better)
Translates to: HAISLELLGRPS*RGRTDHGHSPT
Trigger: AGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 72 bp GCCGGCGGCATTCTGTACCTGGATGGGTGTCACTGCTaGCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGT +
Preference number: 3 (lower is better)
Translates to: AGGILYLDGCHC*RGAFLVVRCNC
Trigger: ACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CAA 90 bp GAGGCGCAGGTTGTGGGGAGGCCAGCGAGTGATGGGACAGGCCCACAGATGCAGTGCATGGATGTCCCTTaGAACCAGCCATCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: EAQVVGRPASDGTGPQMQCMDVP*NQPSWQ
Trigger: CTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCA...CTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 72 bp GGGGCACTGGCTCGACTGATACTGATGGCAGCAGTGTaGGTGGCTGAGCCTGGCATCAGAGGCGCAGGTTGT +
Preference number: 3 (lower is better)
Translates to: GALARLILMAAV*VAEPGIRGAGC
Trigger: ACAACCTGCGCCTCTGATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 72 bp CGGCATTCTGTACCTGGATGGGTGTCACTGCTGCCGTaGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: RHSVPGWVSLLP*GVPGCALQLSS
Trigger: TGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 72 bp TGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTaGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCT +
Preference number: 3 (lower is better)
Translates to: CELLIPQLRGQH*DSQPRHFPGAS
Trigger: AGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CAA 90 bp ACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTCATAGGGACTTTAGCTaGGGAAGCATTTGTCACCGC +
Preference number: 3 (lower is better)
Translates to: TLGLPATPFPWSFWAGPPHRDFS*GSICHR
Trigger: GCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATG...AGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR TCA 72 bp GCGCTGCAACTGTCCTCACAGCATTGCGGGCCTGGTTaGCTGTCATTTGCCCCGTCATGTGCAACAAGACCT +
Preference number: 3 (lower is better)
Translates to: ALQLSSQHCGPG*LSFAPSCATRP
Trigger: AGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CAA 90 bp TGTCTGGTTTGGTTGCTGAACTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGGTGGGGCGTTCCTGGTaGTGCGCTGCAACTGTCCTC +
Preference number: 3 (lower is better)
Translates to: CLVWLLNCSHKLMKHCQEVGRSW*CAATVL
Trigger: GAGGACAGTTGCAGCGCACAACCAGGAACGCCCCAC...CTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 72 bp GTGGCTAATGCATGCCTTAGCCAGAGAGGGAGCGAGTaGACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: VANACLSQRGSE*TEETLVSSGFG
Trigger: CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCTAAGGCATGCATTAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CCA 72 bp TTGTGCGCTGCAACTGTCCTCACAGCATTGCGGGCCTaGTTGACTGTCATTTGCCCCGTCATGTGCAACAAG +
Preference number: 3 (lower is better)
Translates to: LCAATVLTALRA*LTVICPVMCNK
Trigger: CTTGTTGCACATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CCA 72 bp GTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTaGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: VEGLTMVTPRLV*PAVDIGTLAWE
Trigger: TTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CAA 90 bp CTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGACTGGTTGACTGTCATTaGCCCCGTCATGTGCAACAA +
Preference number: 3 (lower is better)
Translates to: LFPQADEALSGDVGSPGRLVDCH*PRHVQQ
Trigger: TTGTTGCACATGACGGGGCAAATGACAGTCAACCAG...TCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR TCA 72 bp CTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATaGCTGCGTGGCACCGTAATGAAATCGGTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: LPSFCFPDYPDP*LRGTVMKSVGE
Trigger: CTCTCCCACCGATTTCATTACGGTGCCACGCAGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CCA 72 bp ACAGGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTaGGCAAATTCACTCCCACCAAGCCTTCCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: TGSSGSCHNCKV*ANSLPPSLPEL
Trigger: GAGCTCTGGAAGGCTTGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 72 bp CCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATaGCTTAGCCAGAGAGGGAGCGAGTGCACTGAAGAG +
Preference number: 3 (lower is better)
Translates to: PLSLMTCVVANA*LSQRGSECTEE
Trigger: CTCTTCAGTGCACTCGCTCCCTCTCTGGCTAAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CCA 72 bp CAAAACCCACACAAACATCTTCTTCATTCTGCTCGCTaGGGTAACTGTGCTGGGGCATCAGAGTCACATACC +
Preference number: 3 (lower is better)
Translates to: QNPHKHLLHSAR*GNCAGASESHT
Trigger: GGTATGTGACTCTGATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR TCA 72 bp AAACCCCTATCTTGCTGGTATGCATGGATGTCCCTTTaGACCAGCCATCCTGGCAGCGCTCAAACACTAAAA +
Preference number: 3 (lower is better)
Translates to: KPLSCWYAWMSL*TSHPGSAQTLK
Trigger: TTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR GCA 72 bp ACTGTGCTGGGGCATCAGAGTCACATACCAATCCTTTaGTCATCTCCTGACCATCTGGAAGTCCACAAATGT +
Preference number: 3 (lower is better)
Translates to: TVLGHQSHIPIL*SSPDHLEVHKC
Trigger: ACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGGTATGTGACTCTGATGCCCCAGCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CCA 72 bp CTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTaGCAGCGCTCAAACACTAAAAACATCTCCCCTTTT +
Preference number: 3 (lower is better)
Translates to: LVCMDVPLNQPS*QRSNTKNISPF
Trigger: AAAAGGGGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR-3UTR CAA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATACCCACACAATTAAATaGAGGACTAGGTCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHTHTIK*RTRSSG
Trigger: CCCTGAAGACCTAGTCCTCAATTTAATTGTGTGGGT...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CAA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGTCACAAATGTTTTACTaGTGTCCTGGGCATGCAGGT +
Preference number: 3 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMSQMFY*CPGHAG
Trigger: ACCTGCATGCCCAGGACACAAGTAAAACATTTGTGA...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR TCA 72 bp GCGTGGCACCGTAATGAAATCGGTGGGAGAGGCCAATaGCATCAAGGAATGGATATAAAAAGACAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: AWHRNEIGGRGQ*HQGMDIKRQAL
Trigger: AAGAGCCTGTCTTTTTATATCCATTCCTTGATGTCATTGGCCTCTCCCACCGATTTCATTACGGTGCCACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 72 bp AGGAATGGATATAAAAAGACAGGCTCTTCTGGATCCTaGCACAATTGTAAGGTGTGGGCAAATTCACTCCCA +
Preference number: 3 (lower is better)
Translates to: RNGYKKTGSSGS*HNCKVWANSLP
Trigger: TGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCCTGTCTTTTTATATCCATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR GCA 72 bp GGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTaGTCTCAACAGGAGATAATCCAGCTTCTCCTTACC +
Preference number: 3 (lower is better)
Translates to: GKCIHSMSKRIS*SQQEIIQLLLT
Trigger: GGTAAGGAGAAGCTGGATTATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CAA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGCTGCTTTGTGCTACTTaGTTGTGTGAAGTGATTTTA +
Preference number: 3 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVLLCAT*LCEVIL
Trigger: TAAAATCACTTCACACAACAAAGTAGCACAAAGCAG...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CAA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGCATTTTGTTCAAGGGTaGTGCTGTATTCTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVHFVQG*CCILSH
Trigger: ATGAGAAAGAATACAGCACAACCCTTGAACAAAATG...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR-3UTR CAA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCTTTCCAACCAAACAATaGAGCTGCTTCTGCTATAAA +
Preference number: 3 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCFPTKQ*SCFCYK
Trigger: TTTATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAA...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp CTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCATTGCGGACAGGCCCACAGATaGAGGGCTGAGGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLPWGVPGCALQLSSQHCGQAHR*RAEAGG
Trigger: GCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCC...GCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp CTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAACTGGGCAGGCCCTCCTaGCGTGGAAGGACTGACCAT +
Preference number: 4 (lower is better)
Translates to: LPATPFPWSFWAGPPAVELGRPS*RGRTDH
Trigger: ATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAG...TTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGAGCGGCTGCGGCGGCTaGTGCAGATGCGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGSGCGG*CRCGPT
Trigger: GGTGGGGCCGCATCTGCATCAGCCGCCGCAGCCGCT...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTCTGCGGGGACAACACTaGGACTCCCAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: TLGLPATPFPWSFWAGPPLRGQH*DSQPRH
Trigger: ATGGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAG...AGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 72 bp TGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTaGTGCGCTGCAACTGTCCTCACAGCATTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: WMGVTAAVGRSW*CAATVLTALRA
Trigger: GGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp ATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTGCCCAGACAGCTCGCTaGTCCGTGCAGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ISLELLGRPSCRGRTDHGAQTAR*SVQQQW
Trigger: CCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGC...ACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp CTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGCATGGATGTCCCTTTaGACCAGCCATCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPATPFPWSFWAGPPAVEAWMSL*TSHPGS
Trigger: GCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGC...TTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp CAACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCGTGGCGGTTCTGGGATaGCTGGGAGGACTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: QHWDSQPRHFPGASGQALVAVLG*LGGLVG
Trigger: GCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCAC...GAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp CCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTCACTGATGGGTGTCACTGCTaGCGTGGGGCGTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PWSFWAGPPAVEGLTMVTDGCHC*RGAFLV
Trigger: AACCAGGAACGCCCCACGGCAGCAGTGACACCCATC...AGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CAGAGGCGCAGGTTGTGGGGAGGCCAGCGAGTGATGGGACAGGCCCACAGATGCATGGAGTGGCGGTTCTaGGATGCCTGGGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: QRRRLWGGQRVMGQAHRCMEWRF*DAWEDL
Trigger: CAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCAT...GCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGTGCAATCTGGTCAGTaGATCCTGCCATGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LPATPFPWSFWAGPPAVEVQSGQ*ILPWAS
Trigger: CGAGGCCCATGGCAGGATCCACTGACCAGATTGCAC...TTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp AGGGAGAACGGTCACTATCCGGCCACTGGGCTCAGCCTCCAGAGAAGCACTGGTCCACAGATGCAGGGCTaGGGCCGGCGGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: RENGHYPATGLSLQRSTGPQMQG*GRRHSV
Trigger: TACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGG...ACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp CCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTCAGTTGTCACTGGGCTaGTTGGGGGCGGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: PPAVEGLTMVTPRLVWPAQLSLG*LGAGSQ
Trigger: TTGTGACCCCGCCCCCAAGCAGCCCAGTGACAACTG...AGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTCAGTGGATCCTGCCATaGGCCTCGGTCCCATTCCAG +
Preference number: 4 (lower is better)
Translates to: PPAVEGLTMVTPRLVWPAQWILP*ASVPFQ
Trigger: CTGGAATGGGACCGAGGCCCATGGCAGGATCCACTG...AGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp GAGGCGCAGGTTGTGGGGAGGCCAGCGAGTGATGGGACAGGCCCACAGATGCAGACAGCATTGCGGGCCTaGTTGACTGTCATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: EAQVVGRPASDGTGPQMQTALRA*LTVICP
Trigger: GGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGT...CTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCATTGCGCTTGGGGAAGTCAGTaGAGCAGCTGCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LLPWGVPGCALQLSSQHCAWGSQ*SSCCTG
Trigger: GCCTGTGCAGCAGCTGCTCCACTGACTTCCCCAAGC...GCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp ATTCTGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCCTGGATGTGAGCTGCTaGTACCACAGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: ILYLDGCHCCRGAFLVVRLDVSC*YHSCGD
Trigger: GTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAG...GCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGGATTGCACCCGAGGCTaGTGTCCGCCCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGDCTRG*CPPWEL
Trigger: GAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATC...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AGGGAGAACGGTCACTATCCGGCCACTGGGCTCAGCCTCCAGAGAAGCACTGGTCAGCTCGCTGATCCGTaGAGCAGCAGTGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RENGHYPATGLSLQRSTGQLADP*SSSGVA
Trigger: AGCAACCCCACTGCTGCTGCACGGATCAGCGAGCTG...ACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp ATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTCTGGTCAGTGGATCCTaGCATGGGCCTCGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ISLELLGRPSCRGRTDHGLVSGS*HGPRSH
Trigger: ATGGGACCGAGGCCCATGGCAGGATCCACTGACCAG...ACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp TGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAGGGCGTTCCTGGTTGTaGGCTGCAACTGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: CTWMGVTAAVGRSWLCAAGRSWL*AATVLT
Trigger: TGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCC...TGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp GCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTGTAGACTGGCAGCAGTGTGCGTaGCTGAGCCTGGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: AVEGLTMVTPRLVWPAVDWQQCA*LSLASE
Trigger: CTCTGATGCCAGGCTCAGCCACGCACACTGCTGCCA...GTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCATTGCCACTGTCAGGAGATGTaGGGAGTCCAGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: LLPWGVPGCALQLSSQHCHCQEM*GVQGER
Trigger: CCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTG...GCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp CCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGCAGCGCAGCAGTGTGCGTGGCTaGGCCTGGCATCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PILLVCMDVPLNQPSWQRSSVRG*AWHQRR
Trigger: GCGCCTCTGATGCCAGGCTCAGCCACGCACACTGCT...GCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp TCTGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCCAGAGAAGCACTGGTaGTGCTTGGGGAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SVPGWVSLLPWGVPGCALPEKHW*CLGKSV
Trigger: CACTGACTTCCCCAAGCATCACCAGTGCTTCTCTGG...CAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GCTGCAACTGTCCTCACAGCATTGCGGGCCTGGTTGACTGTCATTTGCCCCGTCGCTGCTCTGGGCTGCTaGCGAGGAACATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AATVLTALRAWLTVICPVAALGC*RGTFSS
Trigger: GCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGC...GACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp AGGGAGAACGGTCACTATCCGGCCACTGGGCTCAGCCTCCAGAGAAGCACTGGTAGTGCTGCTCTGGGCTaGTGCCGAGGAACATTCTCC +
Preference number: 4 (lower is better)
Translates to: RENGHYPATGLSLQRSTGSAALG*CRGTFS
Trigger: GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACT...ACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp TTGGGGAAGTCAGTGGAGCAGCTGCTGCACAGGCCAGAGGGGCACTGGCTCGACCGCCCTTGTGACTGGTaGCACATAATTGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGKSVEQLLHRPEGHWLDRPCDW*HIIARE
Trigger: TTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCG...GTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp TCTGGATGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTGGGACTCCCAGCTGATGGCAGCAGTGTaGGTGGCTGAGCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SGCELLIPQLRGQHWDSQLMAAV*VAEPGI
Trigger: GATGCCAGGCTCAGCCACGCACACTGCTGCCATCAG...CTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp TGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCACGGTTCTGGGATGCCTaGGAGGACTTGTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: CTWMGVTAAVGRSWLCAARFWDA*EDLLAI
Trigger: TATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCG...TGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp TCTGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGACTCCCCGACTTGTCTaGCCAGCTGTAGACATAGGG +
Preference number: 4 (lower is better)
Translates to: SVPGWVSLLPWGVPGCALTPRLV*PAVDIG
Trigger: CCCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGT...CAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp ATTCTGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTCACTATCCGGCCACTaGGCTCAGCCTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ILYLDGCHCCRGAFLVVRSLSGH*AQPPEK
Trigger: CTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGA...GCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp CTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGACTGCCGTGGAAGGACTaGCCATGGTCACTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LFPQADEALSGDVGSPGRLPWKD*PWSLPD
Trigger: GTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAG...TCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp ATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTACACTGGGGCGAGTCTaGGGCCGTAAATGTGCAATC +
Preference number: 4 (lower is better)
Translates to: ISLELLGRPSCRGRTDHGTLGRV*GRKCAI
Trigger: GATTGCACATTTACGGCCGCAGACTCGCCCCAGTGT...ACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAGGCCAGGGCTGCTCCTaGCACTGCAGTCGTGACCGG +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPGQGCS*HCSRDR
Trigger: CCGGTCACGACTGCAGTGGCAGGAGCAGCCCTGGCC...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CAGAGGCGCAGGTTGTGGGGAGGCCAGCGAGTGATGGGACAGGCCCACAGATGCCGTAAATGTGCAATCTaGTCAGTGGATCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: QRRRLWGGQRVMGQAHRCRKCAI*SVDPAM
Trigger: CATGGCAGGATCCACTGACCAGATTGCACATTTACG...GCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp AGGGAGAACGGTCACTATCCGGCCACTGGGCTCAGCCTCCAGAGAAGCACTGGTCACCGCCCTTGTGACTaGTGCCACATAATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RENGHYPATGLSLQRSTGHRPCD*CHIIAR
Trigger: CCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTG...ACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp ATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTTGTGACTGGTGCCACAGCTTTGGGGCAGTGCTaGTCTGGGCTGCTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: IGTLAWEAFVTALVTGATALGQC*SGLLPR
Trigger: CCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGC...TGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp CAACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGGTGCCACATAATTaGCAGGGAAAACCCCTATCT +
Preference number: 4 (lower is better)
Translates to: QHWDSQPRHFPGASGQALLVPHN*QGKPLS
Trigger: AGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAG...GAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp AGAGGGGCACTGGCTCGACTGATACTGATGGCAGCAGTGTGCGTGGCTGAGCCTTCCAGCATCAACTCCTaGCACAGGAGGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: RGALARLILMAAVCVAEPSSINS*HRRLIP
Trigger: TGGGATAAGCCTCCTGTGCCAGGAGTTGATGCTGGA...AGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 72 bp CGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCATaGCGGGCCTGGTTGACTGTCATTTGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: RSWLCAATVLTA*RAWLTVICPVM
Trigger: CATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCACTGCCGTGGAAGGACTaGCCATGGTCACTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPLPWKD*PWSLPD
Trigger: GTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAG...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGCCAGAGAAGCACTGGTaGTGCTTGGGGAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGPEKHW*CLGKSV
Trigger: CACTGACTTCCCCAAGCATCACCAGTGCTTCTCTGG...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTAGTCATAAAGTGCTTTaGACTGAGGTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ISLELLGRPSCRGRTDHGSHKVL*TEVGAE
Trigger: CTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACT...ACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATAGTGCTTTGGGGCAGTaGTGCTCTGGGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHSALGQ*CSGLLP
Trigger: CGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACT...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTTGTGACTGGTGCCACAAGTGCTTTGGGGCAGTaGTGCTCTGGGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IGTLAWEAFVTALVTGATSALGQ*CSGLLP
Trigger: CGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACT...TGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAACGGTCACTATCCGGTTCTTGGTGTCGGAGTaGTTTGGGGCAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DEALSGDVGSPGRTVTIRFLVSE*FGAVLL
Trigger: GAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAA...CCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp ACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTCCTATCTTGCTGGTATaGATGGATGTCCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: TLGLPATPFPWSFWAGPPPILLV*MDVPLN
Trigger: GTTCAAAGGGACATCCATGCATACCAGCAAGATAGG...AGGAGGGCCTGCCCAGAAGCTCCAGGGAAATGGCGTGGCTGGGAGTCCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp TGGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTTCTGGATGGGTGTCACTaGTGCCGTGGGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WPAVDIGTLAWEAFVTALLDGCH*CRGAFL
Trigger: CAGGAACGCCCCACGGCAGCAGTGACACCCATCCAG...AAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGACAGCATTGCGGGCCTaGTTGACTGTCATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGTALRA*LTVICP
Trigger: GGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGT...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGCATTCTGTACCTGGATaGGTGTCACTGCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGHSVPG*VSLLPW
Trigger: CCACGGCAGCAGTGACACCCATCCAGGTACAGAATG...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAGCGGCATTCTGTACCTaGATGGGTGTCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LFPQADEALSGDVGSPGRAAFCT*MGVTAA
Trigger: GGCAGCAGTGACACCCATCCAGGTACAGAATGCCGC...TCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 72 bp TGCGCTGCAACTGTCCTCACAGCATTGCGGGCCTGGTaGACTGTCATTTGCCCCGTCATGTGCAACAAGACC +
Preference number: 4 (lower is better)
Translates to: CAATVLTALRAW*TVICPVMCNKT
Trigger: GGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp AGGGAGAACGGTCACTATCCGGCCACTGGGCTCAGCCTCCAGAGAAGCACTGGTAGCCATGGATTCCATTaGCTTCCCCATGGTACCAAT +
Preference number: 4 (lower is better)
Translates to: RENGHYPATGLSLQRSTGSHGFH*LPHGTN
Trigger: ATTGGTACCATGGGGAAGTCAATGGAATCCATGGCT...ACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGAGCAGTGTGCGTGGCTaGGCCTGGCATCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMSSVRG*AWHQRR
Trigger: GCGCCTCTGATGCCAGGCTCAGCCACGCACACTGCT...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGTTCAAAGTCATAAAGTaGTTTGCACTGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSLLPWGVPGCALQLSSQFKVIK*FALRWG
Trigger: CCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAA...CTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp CCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTCACTTATTCCTATTTTGTCTaGCAGCATTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PWSFWAGPPAVEGLTMVTYSYFV*QHSFSP
Trigger: TGGGCTGAAGGAATGCTGGCAGACAAAATAGGAATA...AGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAGCTGCTCTGGGCTGCTaGCGAGGAACATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPAALGC*RGTFSS
Trigger: GCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGC...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATCAGTTGTCACTGGGCTaGTTGGGGGCGGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHQLSLG*LGAGSQ
Trigger: TTGTGACCCCGCCCCCAAGCAGCCCAGTGACAACTG...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TCTGGATGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTGGGACTCCCAGTTCCTGGTTGTGCGCTaGAACTGTCCTCACAGCATT +
Preference number: 4 (lower is better)
Translates to: SGCELLIPQLRGQHWDSQFLVVR*NCPHSI
Trigger: AATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAA...CTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GATGTCCCTTTGAACCAGCCATCCTGGCAGCGCTCAAACACTAAAAACATCTCCCAGTGGAGCAGCTGCTaGACAGGCCAGAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: DVPLNQPSWQRSNTKNISQWSSC*TGQRGT
Trigger: AGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTG...GGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGATGCATTTGTGCAGTTaGTCCCACTTCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGMHLCS*SHFPHQ
Trigger: CTGGTGGGGGAAGTGGGACCAACTGCACAAATGCAT...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CAGAGGCGCAGGTTGTGGGGAGGCCAGCGAGTGATGGGACAGGCCCACAGATGCTCACAATTAACCCGGTaGTACTTATATGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: QRRRLWGGQRVMGQAHRCSQLTR*YLYEPE
Trigger: CTCAGGTTCATATAAGTACCACCGGGTTAATTGTGA...GCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CCTTGTGACTGGTGCCACATAATTGCCAGGGAAAACCCCTATCTTGCTGGTATGGTGTCACTGCTGCCGTaGGGCGTTCCTGGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: PCDWCHIIARENPYLAGMVSLLP*GVPGCA
Trigger: CGCACAACCAGGAACGCCCCACGGCAGCAGTGACAC...CATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGCAGCGCCATTCTGTACCTGGATaGGTGTCACTGCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PILLVCMDVPLNQPSWQRHSVPG*VSLLPW
Trigger: CCACGGCAGCAGTGACACCCATCCAGGTACAGAATG...GCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATTGGCAGCAGTGTGCGTaGCTGAGCCTGGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHWQQCA*LSLASE
Trigger: CTCTGATGCCAGGCTCAGCCACGCACACTGCTGCCA...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGCAGCGCAGCACTGGTGATGCTTaGGGAAGTCAGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PILLVCMDVPLNQPSWQRSTGDA*GSQWSS
Trigger: GCTGCTCCACTGACTTCCCCAAGCATCACCAGTGCT...GCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
3UTR CAA 72 bp TGTCCTCACAGCATTGCGGGCCTGGTTGACTGTCATTaGCCCCGTCATGTGCAACAAGACCTTAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CPHSIAGLVDCH*PRHVQQDLSLR
Trigger: CCTCAGGCTAAGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp CTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGATTGTCACCGCCCTTGTaGCTGGTGCCACATAATTGC +
Preference number: 4 (lower is better)
Translates to: LFPQADEALSGDVGSPGRLSPPL*LVPHNC
Trigger: GCAATTATGTGGCACCAGTCACAAGGGCGGTGACAA...TCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp CCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGCAGCGCGGACTTGTCTGGATGTaGGCTGCTGATACCACAGCT +
Preference number: 4 (lower is better)
Translates to: PILLVCMDVPLNQPSWQRGLVWM*AADTTA
Trigger: AGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCC...GCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp TGGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTTCATTGCGGGCCTGGTTaGCTGTCATTTGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: WPAVDIGTLAWEAFVTALHCGPG*LSFAPS
Trigger: TGACGGGGCAAATGACAGTCAACCAGGCCCGCAATG...AAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCTGCCACTGCAGTCGTaGCCGGTCCGTCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTLPLQS*PVRPRP
Trigger: TGGACGGGGACGGACCGGTCACGACTGCAGTGGCAG...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AGGGAGAACGGTCACTATCCGGCCACTGGGCTCAGCCTCCAGAGAAGCACTGGTTCCCATTCTATCAGCTaGTTAGCAGCCGAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: RENGHYPATGLSLQRSTGSHSIS*LAAELN
Trigger: GTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGA...ACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGGGCAGGAGCCTGCCCTaGCATGGCCACCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVGRSLP*HGHLLV
Trigger: CACCAGGAGGTGGCCATGGCAGGGCAGGCTCCTGCC...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATATGGAGTGGCGGTTCTaGGATGCCTGGGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHMEWRF*DAWEDL
Trigger: CAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCAT...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATTGGCGCCTGGTGGTGTaGAGGCAAGGACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHWRLVV*RQGQWQ
Trigger: CTGCCACTGTCCTTGCCTCCACACCACCAGGCGCCA...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATGCGGCATTCTGTACCTaGATGGGTGTCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHAAFCT*MGVTAA
Trigger: GGCAGCAGTGACACCCATCCAGGTACAGAATGCCGC...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGGCCATGGCCACCTCCTaGTGGCAGTTCGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVAMATS*WQFGPH
Trigger: GTGGGGCCCGAACTGCCACCAGGAGGTGGCCATGGC...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGGAGGAGGTGGAGCGATaGGAACTGCGGAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMEEVER*ELRSPG
Trigger: CCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTC...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTAGGGAGGAACAGGCCTaGCGAGGAGGTGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTREEQA*RGGGAM
Trigger: CATCGCTCCACCTCCTCGCCAGGCCTGTTCCTCCCT...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TTGGGGAAGTCAGTGGAGCAGCTGCTGCACAGGCCAGAGGGGCACTGGCTCGACCAGAACATCATCCTTTaGAAATGGAAGGCAATCTTT +
Preference number: 4 (lower is better)
Translates to: LGKSVEQLLHRPEGHWLDQNIIL*KWKAIF
Trigger: AAAGATTGCCTTCCATTTGCAAAGGATGATGTTCTG...GTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCATTCTTGGTGTCGGAGTaGTTTGGGGCAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPFLVSE*FGAVLL
Trigger: GAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAA...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATGTGGCGGTTCTGGGATaGCTGGGAGGACTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHVAVLG*LGGLVG
Trigger: GCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCAC...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TCTGGATGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTGGGACTCCCAGTCTGCACAAAGTTGGTaGGGAAAAAGCCATGGATTC +
Preference number: 4 (lower is better)
Translates to: SGCELLIPQLRGQHWDSQSAQSW*GKSHGF
Trigger: GAATCCATGGCTTTTTCCCCACCAACTTTGTGCAGA...CTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGTTGAACCAGCCATCCTaGCAGCGCTCAAACACTAAA +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGLNQPS*QRSNTK
Trigger: TTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAA...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TCTGGATGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTGGGACTCCCAGAAACCCCTATCTTGCTaGTATGCATGGATGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SGCELLIPQLRGQHWDSQKPLSC*YAWMSL
Trigger: AAGGGACATCCATGCATACCAGCAAGATAGGGGTTT...CTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp GATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAACGGTCACTATCCGGATAGGGACTTTAGCTTaGGAAGCATTTGTCACCGCC +
Preference number: 4 (lower is better)
Translates to: DEALSGDVGSPGRTVTIRIGTLA*EAFVTA
Trigger: GGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTAT...CCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CCAATCCTTTGCTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCTCTGCGGGGACAACACTaGGACTCCCAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: PILCSSPDHLEVHKCALSLRGQH*DSQPRH
Trigger: ATGGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAG...AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCGGCCTGGCGAGGAGGTaGAGCGATGGGAACTGCGGA +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTGLARR*SDGNCG
Trigger: TCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCC...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATTTGGCACATGGTAACTaGGGTATACCCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHLAHGN*GIPLTG
Trigger: CCCAGTGAGGGGTATACCTCAGTTACCATGTGCCAA...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TTGTGCGCTGCAACTGTCCTCACAGCATTGCGGGCCTGGTTGACTGTCATTTGCTTGGTAGGGAACATCTaGTGGGAAAGTAAACGAGGG +
Preference number: 4 (lower is better)
Translates to: LCAATVLTALRAWLTVICLVGNI*WESKRG
Trigger: CCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAA...GCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATGCATGGATGTCCCTTTaGACCAGCCATCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHAWMSL*TSHPGS
Trigger: GCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGC...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAGGACTTGTCTGGATGTaGGCTGCTGATACCACAGCT +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPGLVWM*AADTTA
Trigger: AGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCC...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATCCGCCCTGGGAGCTCTaGAGATCTTTTGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHPPWEL*RSFELQ
Trigger: TTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGG...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGAACGGTTTAATAATCTaGACAAAGTTGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: VSLLPWGVPGCALQLSSQNGLII*TKLVGK
Trigger: TTTCCCCACCAACTTTGTGCAGATTATTAAACCGTT...CTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGTTCAAAGTCATAAAGTaGTTTGCACTGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQRGSECTEETLVSSGFGFKVIK*FALRWG
Trigger: CCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAA...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGTGCTGCTCTGGGCTaGTGCCGAGGAACATTCTCC +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHSAALG*CRGTFS
Trigger: GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACT...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp CCAATCCTTTGCTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCTCTGGTCAGTGGATCCTaGCATGGGCCTCGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PILCSSPDHLEVHKCALSLVSGS*HGPRSH
Trigger: ATGGGACCGAGGCCCATGGCAGGATCCACTGACCAG...AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGCTGGGCAGGCCCTCCTaGCGTGGAAGGACTGACCAT +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVLGRPS*RGRTDH
Trigger: ATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAG...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTGGGCGTTCCTGGTTGTaGGCTGCAACTGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTGRSWL*AATVLT
Trigger: TGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCC...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGGAGGAAGCTCTGCACTaGCCAGCTCCACTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMEEALH*PAPLLG
Trigger: CCCTAGAAGTGGAGCTGGGCAGTGCAGAGCTTCCTC...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGCTGGAGAGGAAGCTCTaGACTGCCCAGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMLERKL*TAQLHF
Trigger: GAAGTGGAGCTGGGCAGTGCAGAGCTTCCTCTCCAG...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGATTTTGGTGTTCTTCTTaGTGTCGGAGTGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LFPQADEALSGDVGSPGRFWCSS*CRSALG
Trigger: CCCCAAAGCACTCCGACACCAAGAAGAACACCAAAA...TCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGATTGAACCAGCCATCCTaGCAGCGCTCAAACACTAAA +
Preference number: 4 (lower is better)
Translates to: LFPQADEALSGDVGSPGRLNQPS*QRSNTK
Trigger: TTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAA...TCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATGCTCCACTTCTAGGGTaGGCGATGCTGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHAPLLG*AMLEET
Trigger: TGTCTCCTCCAGCATCGCCCACCCTAGAAGTGGAGC...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAAGTCATAAAGTGCTTTaGACTGAGGTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPSHKVL*TEVGAE
Trigger: CTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACT...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGGACAGGCCCACAGATaGAGGGCTGAGGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSGQAHR*RAEAGG
Trigger: GCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCC...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATCTTGTGTCCTGGGCATaGAGGTCAGTTGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHLVSWA*RSVGVK
Trigger: TTTTACCCCAACTGACCTGCATGCCCAGGACACAAG...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGAACGGTCACTATCCGGCCATTGACTTCCCCATaGTACCAATTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: DEALSGDVGSPGRTVTIRPLTSP*YQFSST
Trigger: AGTGGATGAAAATTGGTACCATGGGGAAGTCAATGG...CCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCCAGCAGCAGCGGCGGTaGCGCCTGGTGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVQQQRR*RLVVWR
Trigger: CCTCCACACCACCAGGCGCCACCGCCGCTGCTGCTG...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATATGGCCACCTCCTGGTaGCAGTTCGGGCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYMATSW*QFGPHR
Trigger: GCGGTGGGGCCCGAACTGCCACCAGGAGGTGGCCAT...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATAGCCATGGATTCCATTaGCTTCCCCATGGTACCAAT +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHSHGFH*LPHGTN
Trigger: ATTGGTACCATGGGGAAGTCAATGGAATCCATGGCT...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAGGTGGGAGAGGCCAATaGCATCAAGGAATGGATATA +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPGGRGQ*HQGMDI
Trigger: TATATCCATTCCTTGATGTCATTGGCCTCTCCCACC...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCACCAGCAAACATCGCTTaGAAAACGTATGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPPANIA*KTYAGK
Trigger: CTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGG...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAACCTTAATGCATTTGTaGAGTTGGTCCCACTTCCCC +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPTLMHL*SWSHFP
Trigger: GGGGAAGTGGGACCAACTGCACAAATGCATTAAGGT...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTCTGGATGGGTGTCACTaGTGCCGTGGGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLLDGCH*CRGAFL
Trigger: CAGGAACGCCCCACGGCAGCAGTGACACCCATCCAG...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATCAGTGGAGCAGCTGCTaGACAGGCCAGAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDQWSSC*TGQRGT
Trigger: AGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTG...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATGGCTGCTCCTGCCACTaGAGTCGTGACCGGTCCGTC +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNGCSCH*SRDRSV
Trigger: GACGGACCGGTCACGACTGCAGTGGCAGGAGCAGCC...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAGGAGTCCAGGGAACTTaGCTTCCTATGAAAAGCATC +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPGVQGT*LPMKSI
Trigger: GATGCTTTTCATAGGAAGGCAAGTTCCCTGGACTCC...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TATGAACTTTTCACAGTGTTTCTTATAGCCTTTGACTTAACACGAGTGCATCACAGCGGCGGTGGCGCCTaGTGGTGTGGAGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: YELFTVFLIAFDLTRVHHSGGGA*WCGGKD
Trigger: GTCCTTGCCTCCACACCACCAGGCGCCACCGCCGCT...GTGATGCACTCGTGTTAAGTCAAAGGCTATAAGAAACACTGTGAAAAGTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCGTGCAATCTGGTCAGTaGATCCTGCCATGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTVQSGQ*ILPWAS
Trigger: CGAGGCCCATGGCAGGATCCACTGACCAGATTGCAC...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTGTGTCACTGCTGCCGTaGGGCGTTCCTGGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLVSLLP*GVPGCA
Trigger: CGCACAACCAGGAACGCCCCACGGCAGCAGTGACAC...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CCAATCCTTTGCTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCTAGCACTGGTGATGCTTaGGGAAGTCAGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PILCSSPDHLEVHKCALSSTGDA*GSQWSS
Trigger: GCTGCTCCACTGACTTCCCCAAGCATCACCAGTGCT...AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGCCCAGACAGCTCGCTaGTCCGTGCAGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSAQTAR*SVQQQW
Trigger: CCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGC...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATCTGGATGTGAGCTGCTaGTACCACAGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDLDVSC*YHSCGD
Trigger: GTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAG...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGCGCTTGCAAAACGTATaGTGGCAAGGCAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMRLQNV*WQGKTF
Trigger: GAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCG...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCATCCCATTCTATCAGCTaGTTAGCAGCCGAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPSHSIS*LAAELN
Trigger: GTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGA...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCGCTTTGGGGCAGTGCTaGTCTGGGCTGCTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVALGQC*SGLLPR
Trigger: CCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGC...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TGTCTGGTTTGGTTGCTGAACTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGGGAAAACCCCTATCTTaGTGGTATGCATGGATGTCC +
Preference number: 4 (lower is better)
Translates to: CLVWLLNCSHKLMKHCQEGKPLS*WYAWMS
Trigger: GGACATCCATGCATACCAGCAAGATAGGGGTTTTCC...CTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR GCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTGATGGGTGTCACTGCTaGCGTGGGGCGTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLDGCHC*RGAFLV
Trigger: AACCAGGAACGCCCCACGGCAGCAGTGACACCCATC...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCCAGCAAGATGTTACTaGGAAGCTCCTCGACACCCG +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTPARCY*EAPRHP
Trigger: CGGGTGTCGAGGAGCTTCCCAGTAACATCTTGCTGG...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATTCTGCACAAAGTTGGTaGGGAAAAAGCCATGGATTC +
Preference number: 4 (lower is better)
Translates to: THTNIFFILLAGVTVLGHSAQSW*GKSHGF
Trigger: GAATCCATGGCTTTTTCCCCACCAACTTTGTGCAGA...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGGCGGTGGCGCCTGGTaGTGTGGAGGCAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSGGGAW*CGGKDS
Trigger: ACTGTCCTTGCCTCCACACCACCAGGCGCCACCGCC...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTACAGTGGATCCTGCCATaGGCCTCGGTCCCATTCCAG +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLQWILP*ASVPFQ
Trigger: CTGGAATGGGACCGAGGCCCATGGCAGGATCCACTG...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGCACCGCCCTTGTGACTaGTGCCACATAATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVHRPCD*CHIIAR
Trigger: CCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTG...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCACTCCCCGACTTGTCTaGCCAGCTGTAGACATAGGG +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTTPRLV*PAVDIG
Trigger: CCCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGT...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATGCTTGGGGAAGTCAGTaGAGCAGCTGCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDAWGSQ*SSCCTG
Trigger: GCCTGTGCAGCAGCTGCTCCACTGACTTCCCCAAGC...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CAA 72 bp CACAGTCACAGGAGTAGTCTCCTGGTTAACTCATCCTaGATGTCTGTCTGCTGGGAGGACATAAAAGACCAC +
Preference number: 4 (lower is better)
Translates to: HSHRSSLLVNSS*MSVCWEDIKDH
Trigger: GTGGTCTTTTATGTCCTCCCAGCAGACAGACATCAAGGATGAGTTAACCAGGAGACTACTCCTGTGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CAA 72 bp AGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTaGTTTTCCGGACTACCCAGATCCATGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RILFITRLSSLL*FSGLPRSMTAW
Trigger: CCACGCAGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CAA 72 bp AAAACCCCTATCTTGCTGGTATGCATGGATGTCCCTTaGAACCAGCCATCCTGGCAGCGCTCAAACACTAAA +
Preference number: 4 (lower is better)
Translates to: KTPILLVCMDVP*NQPSWQRSNTK
Trigger: TTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR TCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCTTGTCACCGCCCTTGTaGCTGGTGCCACATAATTGC +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTLSPPL*LVPHNC
Trigger: GCAATTATGTGGCACCAGTCACAAGGGCGGTGACAA...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCCCACAGATGCAGGGCTaGGGCCGGCGGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVPQMQG*GRRHSV
Trigger: TACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGG...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCGAACTTGCCTTCCTATaGAAAGCATCCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTELAFL*KASWAR
Trigger: CCTGGCCCAGGATGCTTTTCATAGGAAGGCAAGTTC...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATCAGCTCGCTGATCCGTaGAGCAGCAGTGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNQLADP*SSSGVA
Trigger: AGCAACCCCACTGCTGCTGCACGGATCAGCGAGCTG...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATGGAAAACCCCTATCTTaGTGGTATGCATGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHGKPLS*WYAWMS
Trigger: GGACATCCATGCATACCAGCAAGATAGGGGTTTTCC...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATCTGATGGCAGCAGTGTaGGTGGCTGAGCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNLMAAV*VAEPGI
Trigger: GATGCCAGGCTCAGCCACGCACACTGCTGCCATCAG...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCATCCTGGGCCAGGGCTaGTCCTGCCACTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCILGQG*SCHCSR
Trigger: ACGACTGCAGTGGCAGGAGCAGCCCTGGCCCAGGAT...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTAAGGTATACCCCTCACTaGGGGGCTCCAGGATTGCAC +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLRYTPH*GAPGLH
Trigger: GTGCAATCCTGGAGCCCCCCAGTGAGGGGTATACCT...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AACTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAATCATCCTTTGCAAATaGAAGGCAATCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: NCSHKLMKHCQEMWGVQGIILCK*KAIFVC
Trigger: GCAGACAAAGATTGCCTTCCATTTGCAAAGGATGAT...TCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGTCCAGCATCAACTCCTaGCACAGGAGGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVSSINS*HRRLIP
Trigger: TGGGATAAGCCTCCTGTGCCAGGAGTTGATGCTGGA...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATCGTAAATGTGCAATCTaGTCAGTGGATCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHRKCAI*SVDPAM
Trigger: CATGGCAGGATCCACTGACCAGATTGCACATTTACG...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTACACTGTCAGGAGATGTaGGGAGTCCAGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLHCQEM*GVQGER
Trigger: CCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTG...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTCATCTCCTGACCATCTaGAAGTCCACAAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTHLLTI*KSTNVL
Trigger: GAGCACATTTGTGGACTTCCAGATGGTCAGGAGATG...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGATCCATGACTGCGTaGCACCGTAATGAAATCGGT +
Preference number: 4 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHRSMTA*HRNEIG
Trigger: ACCGATTTCATTACGGTGCCACGCAGTCATGGATCT...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp CCAATCCTTTGCTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCTTGCACTCGGGACATCTaGGTTCATTTCGAGAACCTA +
Preference number: 4 (lower is better)
Translates to: PILCSSPDHLEVHKCALSCTRDI*VHFENL
Trigger: TAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCA...AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATCATTGCGGGCCTGGTTaGCTGTCATTTGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNHCGPG*LSFAPS
Trigger: TGACGGGGCAAATGACAGTCAACCAGGCCCGCAATG...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGTGGTTAACTCATCCTTaGTGTCTGTCTGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVWLTHP*CLSAGR
Trigger: CCTCCCAGCAGACAGACATCAAGGATGAGTTAACCA...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTACACTGGGGCGAGTCTaGGGCCGTAAATGTGCAATC +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLTLGRV*GRKCAI
Trigger: GATTGCACATTTACGGCCGCAGACTCGCCCCAGTGT...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp CCAATCCTTTGCTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCTCTGGTGCCACATAATTaGCAGGGAAAACCCCTATCT +
Preference number: 4 (lower is better)
Translates to: PILCSSPDHLEVHKCALSLVPHN*QGKPLS
Trigger: AGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAG...AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTACAGAGAGGGAGCGAGTaGACTGAAGAGACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLQRGSE*TEETLV
Trigger: GACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTG...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATGGCTGCTGTCCGCCCTaGGAGCTCTGCAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYGCCPP*ELCRSF
Trigger: AAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCC...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTCGGTTCTGGGATGCCTaGGAGGACTTGTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLRFWDA*EDLLAI
Trigger: TATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCG...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATGACTACCCAGATCCATaGCTGCGTGGCACCGTAATG +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNDYPDP*LRGTVM
Trigger: CATTACGGTGCCACGCAGTCATGGATCTGGGTAGTC...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTACGCCCTTGTGACTGGTaGCACATAATTGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLRPCDW*HIIARE
Trigger: TTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCG...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCTGGAGCGATGGGAACTaGGGAGTCCAGGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSWSDGN*GVQGTC
Trigger: GCAAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCA...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTGTAGTGGCTAATGCATaGCTTAGCCAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLVVANA*LSQRGS
Trigger: GCTCCCTCTCTGGCTAAGGCATGCATTAGCCACTAC...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TATGAACTTTTCACAGTGTTTCTTATAGCCTTTGACTTAACACGAGTGCATCACTCACTATCCGGCCACTaGGCTCAGCCTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: YELFTVFLIAFDLTRVHHSLSGH*AQPPEK
Trigger: CTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGA...GTGATGCACTCGTGTTAAGTCAAAGGCTATAAGAAACACTGTGAAAAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATCTTCATTCTGCTCGCTaGGGTAACTGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNLHSAR*GNCAGA
Trigger: TGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAG...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTGCCACAGTGCTGCTCTaGGACCTTAATGCATTTGTG +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLATVLL*DLNAFV
Trigger: CACAAATGCATTAAGGTCTCAGAGCAGCACTGTGGC...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCCCACACAATTAAATTaGGGACTAGGTCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTPTQLN*GLGLQG
Trigger: ACCCTGAAGACCTAGTCCTCAATTTAATTGTGTGGG...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCCTATCTTGCTGGTATaGATGGATGTCCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTPILLV*MDVPLN
Trigger: GTTCAAAGGGACATCCATGCATACCAGCAAGATAGG...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTTTCCTGGTTGTGCGCTaGAACTGTCCTCACAGCATT +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLFLVVR*NCPHSI
Trigger: AATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAA...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGAAGATCCAACAAGGCTaGTTCATCCATCTTTATCTA +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMKIQQG*FIHLYL
Trigger: TAGATAAAGATGGATGAATCAGCCTTGTTGGATCTT...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTATTGGTAGGGAACATCTaGTGGGAAAGTAAACGAGGG +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLLVGNI*WESKRG
Trigger: CCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAA...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATCCTTTGCTCATCTCCTaGCCATCTGGAAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYPLLIS*PSGSPQ
Trigger: TTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGG...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTTTCCAACCAAACAATTaGGCTGCTTCTGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTFQPNN*AASAIK
Trigger: TTTTATAGCAGAAGCAGCTCAATTGTTTGGTTGGAA...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGAGTTGTATAATGCTTTaGCACATGGTAACTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMSCIML*HMVTEV
Trigger: TACCTCAGTTACCATGTGCCAAAGCATTATACAACT...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATTTTTGGTGTTCTTCTTaGTGTCGGAGTGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDFWCSS*CRSALG
Trigger: CCCCAAAGCACTCCGACACCAAGAAGAACACCAAAA...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTATTCCACAAAGCTTCCTaGGAAAAGGCCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLFHKAS*EKASFP
Trigger: GGGAAAACTGGCCTTTTCCCAGGAAGCTTTGTGGAA...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGCACTGAAGAGACCTTaGTCAGTAGTGGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSALKRP*SVVALG
Trigger: CCCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGC...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCTGCCATCCAGAAGTCTaGCCAGCAAGATGTTACTGG +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSCHPEV*PARCYW
Trigger: CCAGTAACATCTTGCTGGTCAGACTTCTGGATGGCA...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATGTTGTAATGTGCCTTTaGACCAGCCATCCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNVVMCL*TSHPLV
Trigger: AACGAGAGGATGGCTGGTTCAAAGGCACATTACAAC...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCTTTAAGTTCAAGTTCTaGCTCACTCTGAGGAGGATA +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTFKFKF*LTLRRI
Trigger: TATCCTCCTCAGAGTGAGGCAGAACTTGAACTTAAA...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGGAATCCAGTAATACATaGAAGACGTGGGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVESSNT*KTWGKN
Trigger: ATTCTTTCCCCACGTCTTGCATGTATTACTGGATTC...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTAAACCCCTATCTTGCTaGTATGCATGGATGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLKPLSC*YAWMSL
Trigger: AAGGGACATCCATGCATACCAGCAAGATAGGGGTTT...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTATTGATGTCTGTCTGCTaGGAGGACATAAAAGACCAC +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLLMSVC*EDIKDH
Trigger: GTGGTCTTTTATGTCCTCCCAGCAGACAGACATCAA...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CAA 72 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTaGCTCTCAACAGGAGATAATCCAGCTTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GKMHSLYVKTNL*LSTGDNPASPY
Trigger: GTAAGGAGAAGCTGGATTATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATGCTCTGCAGATCTTTTaGGCTACAATTAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYALQIF*ATISHS
Trigger: ACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGC...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTATACACAGATGAAAGCTaGTGCCAGCTTTTTCCTAAC +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLYTDES*CQLFPN
Trigger: GTTAGGAAAAAGCTGGCATCAGCTTTCATCTGTGTA...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTAGTCAACTTACACAGATaGAAGCTGATGCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLVNLHR*KLMPAF
Trigger: AAAAGCTGGCATCAGCTTTCATCTGTGTAAGTTGAC...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCTATACCAGGAAACTATaGACAGAGGTACTTCAATCA +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTYTRKL*TEVLQS
Trigger: TGATTGAAGTACCTCTGTTCATAGTTTCCTGGTATA...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCAACGGTTTAATAATCTaGACAAAGTTGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTNGLII*TKLVGK
Trigger: TTTCCCCACCAACTTTGTGCAGATTATTAAACCGTT...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TATGAACTTTTCACAGTGTTTCTTATAGCCTTTGACTTAACACGAGTGCATCACTTGCAAAACGTATGCTaGCAAGGCAAGACCTTCGCA +
Preference number: 4 (lower is better)
Translates to: YELFTVFLIAFDLTRVHHLQNVC*QGKTFA
Trigger: TGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAA...GTGATGCACTCGTGTTAAGTCAAAGGCTATAAGAAACACTGTGAAAAGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCATAGGGACTTTAGCTTaGGAAGCATTTGTCACCGCC +
Preference number: 4 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSIGTLA*EAFVTA
Trigger: GGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTAT...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp ATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAGAATCACAATCACAATTGTAAGGTGTaGGCAAATTCACTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ILLWESSNTCKTWGKNHNHNCKV*ANSLPP
Trigger: TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTG...ATTGTGATTCTTTCCCCACGTCTTGCATGTATTACTGGATTCCCACAGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATTATTCCTATTTTGTCTaGCAGCATTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYYSYFV*QHSFSP
Trigger: TGGGCTGAAGGAATGCTGGCAGACAAAATAGGAATA...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGCTCTTTCTGTTAAACTaGTTTGTGCTACTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVLFLLN*FVLLCC
Trigger: ACAACAAAGTAGCACAAAGCAGTTTAACAGAAAGAG...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTTCACAATTAACCCGGTaGTACTTATATGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: GHKRPLSLMTCVVANACLSQLTR*YLYEPE
Trigger: CTCAGGTTCATATAAGTACCACCGGGTTAATTGTGA...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TATGAACTTTTCACAGTGTTTCTTATAGCCTTTGACTTAACACGAGTGCATCACCCATTGACTTCCCCATaGTACCAATTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: YELFTVFLIAFDLTRVHHPLTSP*YQFSST
Trigger: AGTGGATGAAAATTGGTACCATGGGGAAGTCAATGG...GTGATGCACTCGTGTTAAGTCAAAGGCTATAAGAAACACTGTGAAAAGTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR TCA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCGTTTCTTATAGCCTTTaGCTTAACACGAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCVSYSL*LNTSAS
Trigger: TGATGCACTCGTGTTAAGTCAAAGGCTATAAGAAAC...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CCA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCATCATCCTTTGCAAATaGAAGGCAATCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCIILCK*KAIFVC
Trigger: GCAGACAAAGATTGCCTTCCATTTGCAAAGGATGAT...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR GCA 90 bp TATGAACTTTTCACAGTGTTTCTTATAGCCTTTGACTTAACACGAGTGCATCACCAGAACATCATCCTTTaGAAATGGAAGGCAATCTTT +
Preference number: 4 (lower is better)
Translates to: YELFTVFLIAFDLTRVHHQNIIL*KWKAIF
Trigger: AAAGATTGCCTTCCATTTGCAAAGGATGATGTTCTG...GTGATGCACTCGTGTTAAGTCAAAGGCTATAAGAAACACTGTGAAAAGTTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
3UTR CAA 72 bp GAGAAGAGAACACTGTTTATTTTTACACCTCCTGAATaGGTCAATTCTGAGTACAAACTCATCTTAACAGGA +
Preference number: 4 (lower is better)
Translates to: EKRTLFIFTPPE*VNSEYKLILTG
Trigger: TCCTGTTAAGATGAGTTTGTACTCAGAATTGACCAATTCAGGAGGTGTAAAAATAAACAGTGTTCTCTTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 90 bp CACTGCAGTCGTGACCGGTCCGTCCCCGTCCACAGGGCAGGAGCCTaGCCTGCCATGGCCACCTCCTGGTGGCAGTTCGGGCCCCACCGC +
Preference number: 5 (lower is better)
Translates to: HCSRDRSVPVHRAGA*PAMATSWWQFGPHR
Trigger: GCGGTGGGGCCCGAACTGCCACCAGGAGGTGGCCATGGCAGGGCAGGCTCCTGCCCTGTGGACGGGGACGGACCGGTCACGACTGCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 90 bp CTGCCATGGCCACCTCCTGGTGGCAGTTCGGGCCCCACCGCTCCCTaGAGAGGAAGCTCTGCACTGCCCAGCTCCACTTCTAGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LPWPPPGGSSGPTAP*RGSSALPSSTSRVG
Trigger: GCCCACCCTAGAAGTGGAGCTGGGCAGTGCAGAGCTTCCTCTCCAGGGAGCGGTGGGGCCCGAACTGCCACCAGGAGGTGGCCATGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 90 bp TGCCTTCCTATGAAAAGCATCCTGGGCCAGGGCTGCTCCTGCCACTaGAGTCGTGACCGGTCCGTCCCCGTCCACAGGGCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CLPMKSILGQGCSCH*SRDRSVPVHRAGAC
Trigger: GCAGGCTCCTGCCCTGTGGACGGGGACGGACCGGTCACGACTGCAGTGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCATAGGAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 90 bp GGAACTTGCCTTCCTATGAAAAGCATCCTGGGCCAGGGCTGCTCCTaGCACTGCAGTCGTGACCGGTCCGTCCCCGTCCACAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GTCLPMKSILGQGCS*HCSRDRSVPVHRAG
Trigger: TCCTGCCCTGTGGACGGGGACGGACCGGTCACGACTGCAGTGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCATAGGAAGGCAAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 90 bp GTCCAGGGAACTTGCCTTCCTATGAAAAGCATCCTGGGCCAGGGCTaGTCCTGCCACTGCAGTCGTGACCGGTCCGTCCCCGTCCACAGG +
Preference number: 5 (lower is better)
Translates to: VQGTCLPMKSILGQG*SCHCSRDRSVPVHR
Trigger: CCTGTGGACGGGGACGGACCGGTCACGACTGCAGTGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCATAGGAAGGCAAGTTCCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTGTGGGGCGTTCCTGGTaGTGCGCTGCAACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PPAVEGLTMVTPRLVWPAVGRSW*CAATVL
Trigger: GAGGACAGTTGCAGCGCACAACCAGGAACGCCCCAC...AGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp TCTGTACCTGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGGCATTGCGGGCCTGGTaGACTGTCATTTGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: SVPGWVSLLPWGVPGCALALRAW*TVICPV
Trigger: GACGGGGCAAATGACAGTCAACCAGGCCCGCAATGC...CAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCAGGTACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS TCA 90 bp CAGCAGCGGCGGTGGCGCTCCAAGGGCAGCTTGGTAGGGAACATCTaGTGGGAAAGTAAACGAGGGGCCAGTTGTCACTGGGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: QQRRWRSKGSLVGNI*WESKRGASCHWAAW
Trigger: CCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAGCGCCACCGCCGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS CCA 90 bp CTCATTCAAGACAGGACCCAGGGAGGAACAGGCCTGGCGAGGAGGTaGAGCGATGGGAACTGCGGAGTCCAGGGAACTTGCCTTCCTATG +
Preference number: 5 (lower is better)
Translates to: LIQDRTQGGTGLARR*SDGNCGVQGTCLPM
Trigger: CATAGGAAGGCAAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCCTGTTCCTCCCTGGGTCCTGTCTTGAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCACTCGGCTCCTCCTCTTaGTTCGCGGCCCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPLGSSS*FAAPQR
Trigger: CCGCTGCGGGGCCGCGAACAAAGAGGAGGAGCCGAG...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCTCACAGCATTGCTGCATGGATGTCCCTTaGAACCAGCCATCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPWGVPGCALQLSSQHCCMDVP*NQPSWQ
Trigger: CTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCA...GCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS GCA 90 bp GTTCTTCTTGGTGTCGGAGTGCTTTGGGGCAGTGCTGCTCTGGGCTaGTGCCGAGGAACATTCTCCAGCATCAACTCCTGGCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: VLLGVGVLWGSAALG*CRGTFSSINSWHRR
Trigger: CCTCCTGTGCCAGGAGTTGATGCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS CCA 90 bp TGGTGGTGTGGAGGCAAGGACAGTGGCAGCCAGGAGAGGGGGTGGTaGAAGAGGAGGATTCAAAGTTCCAAGGGCAGCTTGGTAGGGAAC +
Preference number: 5 (lower is better)
Translates to: WWCGGKDSGSQERGW*KRRIQSSKGSLVGN
Trigger: GTTCCCTACCAAGCTGCCCTTGGAACTTTGAATCCTCCTCTTCCACCACCCCCTCTCCTGGCTGCCACTGTCCTTGCCTCCACACCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS CCA 90 bp AGACAGGACCCAGGGAGGAACAGGCCTGGCGAGGAGGTGGAGCGATaGGAACTGCGGAGTCCAGGGAACTTGCCTTCCTATGAAAAGCAT +
Preference number: 5 (lower is better)
Translates to: RQDPGRNRPGEEVER*ELRSPGNLPSYEKH
Trigger: ATGCTTTTCATAGGAAGGCAAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCCTGTTCCTCCCTGGGTCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 90 bp ACAGGTCTAGACTCATTCAAGACAGGACCCAGGGAGGAACAGGCCTaGCGAGGAGGTGGAGCGATGGGAACTGCGGAGTCCAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: TGLDSFKTGPREEQA*RGGGAMGTAESREL
Trigger: AAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCCTGTTCCTCCCTGGGTCCTGTCTTGAATGAGTCTAGACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CAGAGGCGCAGGTTGTGGGGAGGCCAGCGAGTGATGGGACAGGCCCACAGATGCTTTTTGGTGTTCTTCTaGGTGTCGGAGTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: QRRRLWGGQRVMGQAHRCFLVFF*VSECFG
Trigger: CCCAAAGCACTCCGACACCAAGAAGAACACCAAAAA...GCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp TGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTGTAGAGCCTGGGAGGACTTGTaGGCCATAGTGAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: CRGRTDHGHSPTCLASCRAWEDL*AIVREV
Trigger: CACTTCCCTCACTATGGCCAACAAGTCCTCCCAGGC...TCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp AGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGGCATTGCGGGCCTGGTaGACTGTCATTTGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: SQRGSECTEETLVSSGFGALRAW*TVICPV
Trigger: GACGGGGCAAATGACAGTCAACCAGGCCCGCAATGC...CCCAAAGCCACTACTGACCAAGGTCTCTTCAGTGCACTCGCTCCCTCTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TGGATGGGTGTCACTGCTGCCGTGGGGCGTTCCTGGTTGTGCGCTGCAACTGTCCATAGGGACTTTAGCTaGGGAAGCATTTGTCACCGC +
Preference number: 5 (lower is better)
Translates to: WMGVTAAVGRSWLCAATVHRDFS*GSICHR
Trigger: GCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATG...GACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACACCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS GCA 90 bp GCCGCTTTTTGGTGTTCTTCTTGGTGTCGGAGTGCTTTGGGGCAGTaGTGCTCTGGGCTGCTGCCGAGGAACATTCTCCAGCATCAACTC +
Preference number: 5 (lower is better)
Translates to: AAFWCSSWCRSALGQ*CSGLLPRNILQHQL
Trigger: GAGTTGATGCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAAAAAGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS CCA 90 bp GCTGCTCTGGGCTGCTGCCGAGGAACATTCTCCAGCATCAACTCCTaGCACAGGAGGCTTATCCCATTCTATCAGCTGCTTAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: AALGCCRGTFSSINS*HRRLIPFYQLLSSR
Trigger: TCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGTTGATGCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS CCA 90 bp TTGGTGTTCTTCTTGGTGTCGGAGTGCTTTGGGGCAGTGCTGCTCTaGGCTGCTGCCGAGGAACATTCTCCAGCATCAACTCCTGGCACA +
Preference number: 5 (lower is better)
Translates to: LVFFLVSECFGAVLL*AAAEEHSPASTPGT
Trigger: TGTGCCAGGAGTTGATGCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS-3UTR CAA 90 bp GCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTGTAGACCTGGTTGACTGTCATTaGCCCCGTCATGTGCAACAA +
Preference number: 5 (lower is better)
Translates to: AVEGLTMVTPRLVWPAVDLVDCH*PRHVQQ
Trigger: TTGTTGCACATGACGGGGCAAATGACAGTCAACCAG...GTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS TCA 90 bp GCTCCTCGACACCCGAGCCAACAAGAGTCCTGCACTCGGGACATCTaGGTTCATTTCGAGAACCTACGATCCCCAGCAAACATCGCTTGC +
Preference number: 5 (lower is better)
Translates to: APRHPSQQESCTRDI*VHFENLRSPANIAC
Trigger: GCAAGCGATGTTTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTGTCGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS-3UTR CAA 90 bp TGGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTTTTGTCACTGGGCTGCTaGGGGGCGGGGTCACAATTA +
Preference number: 5 (lower is better)
Translates to: WPAVDIGTLAWEAFVTALLSLGC*GAGSQL
Trigger: TAATTGTGACCCCGCCCCCAAGCAGCCCAGTGACAA...AAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS CCA 90 bp CGAGAACCTACGATCCCCAGCAAACATCGCTTGCAAAACGTATGCTaGCAAGGCAAGACCTTCGCAGAAGCATCAAGGCGCTCTAGACAC +
Preference number: 5 (lower is better)
Translates to: REPTIPSKHRLQNVC*QGKTFAEASRRSRH
Trigger: GTGTCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGTAGGTTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS-3UTR CAA 90 bp CCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTTCAGAACATCATCCTTaGCAAATGGAAGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: PPAVEGLTMVTPRLVWPASEHHP*QMEGNL
Trigger: AAGATTGCCTTCCATTTGCAAAGGATGATGTTCTGA...AGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAGATGCCTGGGAGGACTaGTTGGCCATAGTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPDAWED*LAIVRE
Trigger: TTCCCTCACTATGGCCAACAAGTCCTCCCAGGCATC...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS TCA 90 bp AAGAGGAGGATTCAAAGTTCCAAGGGCAGCTTGGTAGGGAACATCTaGTGGGAAAGTAAACGAGGGGCCAGTTGTCACTGGGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: KRRIQSSKGSLVGNI*WESKRGASCHWAAW
Trigger: CCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAATCCTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS-3UTR CAA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCAAATGCATTTGTGCAGTaGGTCCCACTTCCCCCACCA +
Preference number: 5 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPNAFVQ*VPLPPP
Trigger: TGGTGGGGGAAGTGGGACCAACTGCACAAATGCATT...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATGCCTGGGAGGACTTGTaGGCCATAGTGAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHAWEDL*AIVREV
Trigger: CACTTCCCTCACTATGGCCAACAAGTCCTCCCAGGC...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAAACCCCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGGATGCCTGGGAGGACTaGTTGGCCATAGTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: KTPILLVCMDVPLNQPSWDAWED*LAIVRE
Trigger: TTCCCTCACTATGGCCAACAAGTCCTCCCAGGCATC...CCAGGATGGCTGGTTCAAAGGGACATCCATGCATACCAGCAAGATAGGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS GCA 90 bp TTTCGAGAACCTACGATCCCCAGCAAACATCGCTTGCAAAACGTATaGTGGCAAGGCAAGACCTTCGCAGAAGCATCAAGGCGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: FREPTIPSKHRLQNV*WQGKTFAEASRRSR
Trigger: TCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGTAGGTTCTCGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS-3UTR CAA 90 bp CCAATCCTTTGCTCATCTCCTGACCATCTGGAAGTCCACAAATGTGCTCTTTCTCATCCATTTCAGACTTaGCTCTCGCGCCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: PILCSSPDHLEVHKCALSHPFQT*LSRLGS
Trigger: GGAGCCGAGGCGCGAGAGCAAAGTCTGAAATGGATG...AGAAAGAGCACATTTGTGGACTTCCAGATGGTCAGGAGATGAGCAAAGGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CTGGTTGACTGTCATTTGCCCCGTCATGTGCAACAAGACCTTAGCCTGAGGACTCCTTGTCTGGTTTGGTaGCTGAACTGTTCCCACAAG +
Preference number: 5 (lower is better)
Translates to: LVDCHLPRHVQQDLSLRTPCLVW*LNCSHK
Trigger: CTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGG...AGTCCTCAGGCTAAGGTCTTGTTGCACATGACGGGGCAAATGACAGTCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS TCA 90 bp GAGCTCTGCAGATCTTTTGAGCTACAATTAGCCACAGTGCTGCTCTaGGACCTTAATGCATTTGTGCAGTTGGTCCCACTTCCCCCACCA +
Preference number: 5 (lower is better)
Translates to: ELCRSFELQLATVLL*DLNAFVQLVPLPPP
Trigger: TGGTGGGGGAAGTGGGACCAACTGCACAAATGCATTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS-3UTR CAA 90 bp GGCTCTTCTGGATCCTGCCACAATTGTAAGGTGTGGGCAAATTCACTCCCACCATTTTTGGTGTTCTTCTaGGTGTCGGAGTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GSSGSCHNCKVWANSLPPFLVFF*VSECFG
Trigger: CCCAAAGCACTCCGACACCAAGAAGAACACCAAAAA...TGGTGGGAGTGAATTTGCCCACACCTTACAATTGTGGCAGGATCCAGAAGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TGGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTTCTATCCTTGTCTGGTTaGGTTGCTGAACTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: WPAVDIGTLAWEAFVTALLSLSG*VAELFP
Trigger: TGGGAACAGTTCAGCAACCAAACCAGACAAGGATAG...AAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATGTCTACAGCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTCATAGGGACTTTAGCTaGGGAAGCATTTGTCACCGC +
Preference number: 5 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTHRDFS*GSICHR
Trigger: GCGGTGACAAATGCTTCCCAAGCTAAAGTCCCTATG...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AACTGTTCCCACAAGCTGATGAAGCACTGTCAGGAGATGTGGGGAGTCCAGGGAGGAAATATTCCTATTTaGTCTGCCAGCATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: NCSHKLMKHCQEMWGVQGGNIPI*SASIPS
Trigger: TGAAGGAATGCTGGCAGACAAAATAGGAATATTTCC...TCCCTGGACTCCCCACATCTCCTGACAGTGCTTCATCAGCTTGTGGGAACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTTTGTCACTGGGCTGCTaGGGGGCGGGGTCACAATTA +
Preference number: 5 (lower is better)
Translates to: GHKRPLSLMTCVVANACLLSLGC*GAGSQL
Trigger: TAATTGTGACCCCGCCCCCAAGCAGCCCAGTGACAA...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCGTGGGGCGTTCCTGGTaGTGCGCTGCAACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCVGRSW*CAATVL
Trigger: GAGGACAGTTGCAGCGCACAACCAGGAACGCCCCAC...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CTTGTGTCCTGGGCATGCAGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATCTATCCTTGTCTGGTTaGGTTGCTGAACTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: LVSWACRSVGVKCEMTLHLSLSG*VAELFP
Trigger: TGGGAACAGTTCAGCAACCAAACCAGACAAGGATAG...ATGAAGCGTCATTTCACATTTTACCCCAACTGACCTGCATGCCCAGGACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp GATGTCCCTTTGAACCAGCCATCCTGGCAGCGCTCAAACACTAAAAACATCTCCAATGGAAGGCAATCTTaGTCTGCTTCCTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: DVPLNQPSWQRSNTKNISNGRQS*SASLSF
Trigger: GAAAGACAAGGAAGCAGACAAAGATTGCCTTCCATT...GGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp ACCCACACAAACATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTGGGGCATGGAAATATTCCTATTTaGTCTGCCAGCATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: THTNIFFILLAGVTVLGHGNIPI*SASIPS
Trigger: TGAAGGAATGCTGGCAGACAAAATAGGAATATTTCC...ATGCCCCAGCACAGTTACCCCAGCGAGCAGAATGAAGAAGATGTTTGTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATTGCATGGATGTCCCTTaGAACCAGCCATCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDCMDVP*NQPSWQ
Trigger: CTGCCAGGATGGCTGGTTCAAAGGGACATCCATGCA...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCCTTGTCTGGTTTGGTaGCTGAACTGTTCCCACAAG +
Preference number: 5 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTPCLVW*LNCSHK
Trigger: CTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGG...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCTGTCTTCCCTCCTTTaGTTTTCCGGACTACCCAGA +
Preference number: 5 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTLSSLL*FSGLPR
Trigger: TCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAG...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AGGTCAGTTGGGGTAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGGAGACCTTAATGCATTaGTGCAGTTGGTCCCACTTC +
Preference number: 5 (lower is better)
Translates to: RSVGVKCEMTLHSHSQTVETLMH*CSWSHF
Trigger: GAAGTGGGACCAACTGCACAAATGCATTAAGGTCTC...CACTGTCTGAGAATGGCTATGAAGCGTCATTTCACATTTTACCCCAACTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp CCTTGTGACTGGTGCCACATAATTGCCAGGGAAAACCCCTATCTTGCTGGTATGATGATGATGTCACCTTaGCTGAATTTAAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PCDWCHIIARENPYLAGMMMMSP*LNLRSP
Trigger: TGGAGACCTTAAATTCAGCAAAGGTGACATCATCAT...CATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp CCTTGTGACTGGTGCCACATAATTGCCAGGGAAAACCCCTATCTTGCTGGTATGTCTTTGTCTGCTTCCTaGTCTTTCACTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PCDWCHIIARENPYLAGMSLSAS*SFTSKS
Trigger: TGACTTTGAAGTGAAAGACAAGGAAGCAGACAAAGA...CATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS-3UTR CAA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTCTGTGTAACAAGCCCTaGTTACAAAATCTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTLCNKP*LQNLPL
Trigger: TAGAGGGAGATTTTGTAACAAGGGCTTGTTACACAG...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTATTCCAAGGCCTCTGTTaGATGCCATCCAGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: CVVNQTVQGTPYTSESRLFQGLC*MPSRSL
Trigger: CAGACTTCTGGATGGCATCAAACAGAGGCCTTGGAA...TAGTCTGGATTCGGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp ATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTTCTTTGTCTGCTTCCTaGTCTTTCACTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ITRLSSLLLFSGLPRSMTSLSAS*SFTSKS
Trigger: TGACTTTGAAGTGAAAGACAAGGAAGCAGACAAAGA...AGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp GGGAAAATGCATTCACTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATCTGGTTGACTGTCATTaGCCCCGTCATGTGCAACAA +
Preference number: 5 (lower is better)
Translates to: GKMHSLYVKTNLLLSTGDLVDCH*PRHVQQ
Trigger: TTGTTGCACATGACGGGGCAAATGACAGTCAACCAG...ATCTCCTGTTGAGAGCAAGAGATTCGTTTTGACATAGAGTGAATGCATTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGTTTCCAACCAAACAATaGAGCTGCTTCTGCTATAAA +
Preference number: 5 (lower is better)
Translates to: FITRLSSLLLFSGLPRSMFPTKQ*SCFCYK
Trigger: TTTATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAA...CATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCCCCAGCAAACATCGCTaGCAAAACGTATGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCPSKHR*QNVCWQ
Trigger: TTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGG...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCCGGAGTCCAGGGAACTaGCCTTCCTATGAAAAGCAT +
Preference number: 5 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSRSPGN*PSYEKH
Trigger: ATGCTTTTCATAGGAAGGCAAGTTCCCTGGACTCCG...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCCGTTGTAATGTGCCTTaGAACCAGCCATCCTCTCGT +
Preference number: 5 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSRCNVP*NQPSSR
Trigger: ACGAGAGGATGGCTGGTTCAAAGGCACATTACAACG...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCCTGGTTAACTCATCCTaGATGTCTGTCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVLVNSS*MSVCWE
Trigger: CTCCCAGCAGACAGACATCAAGGATGAGTTAACCAG...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp GGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTAATGGAAGGCAATCTTaGTCTGCTTCCTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: GHKRPLSLMTCVVANACLNGRQS*SASLSF
Trigger: GAAAGACAAGGAAGCAGACAAAGATTGCCTTCCATT...AAGGCATGCATTAGCCACTACACAAGTCATTAGTGAAAGTGGTCTTTTATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATTCACAAATGTTTTACTaGTGTCCTGGGCATGCAGGT +
Preference number: 5 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYSQMFY*CPGHAG
Trigger: ACCTGCATGCCCAGGACACAAGTAAAACATTTGTGA...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCTTTACACCTCCTGAATaGGTCAATTCTGAGTACAAA +
Preference number: 5 (lower is better)
Translates to: KDLIHYQAVFPPFVFRTTFTPPE*VNSEYK
Trigger: TTTGTACTCAGAATTGACCAATTCAGGAGGTGTAAA...GGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCCTGGTAATGAATAAGATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATATGATGATGTCACCTTaGCTGAATTTAAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYMMMSP*LNLRSP
Trigger: TGGAGACCTTAAATTCAGCAAAGGTGACATCATCAT...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TACAACTTCAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATTCAGAACATCATCCTTaGCAAATGGAAGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: YNFNFPYFPTKQLSCFCYSEHHP*QMEGNL
Trigger: AAGATTGCCTTCCATTTGCAAAGGATGATGTTCTGA...ATAGCAGAAGCAGCTCAATTGTTTGGTTGGAAAGTAGGGGAAATTGAAGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCGTCAAAACGAATCTCTaGCTCTCAACAGGAGATAAT +
Preference number: 5 (lower is better)
Translates to: YKLILTGNRNEIYTPCTVVKTNL*LSTGDN
Trigger: ATTATCTCCTGTTGAGAGCAAGAGATTCGTTTTGAC...GACTGTGCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp AAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCCTGCTTTGTGCTACTTaGTTGTGTGAAGTGATTTTA +
Preference number: 5 (lower is better)
Translates to: KKFLCVVNQTVQGTPYTSLLCAT*LCEVIL
Trigger: TAAAATCACTTCACACAACAAAGTAGCACAAAGCAG...GGATGTATAAGGTGTGCCTTGTACTGTCTGATTTACTACACAGAGAAACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS-3UTR CAA 90 bp TCTGAGTACAAACTCATCTTAACAGGAAATCGCAATGAAATATACACACCATGCCATTTTGTTCAAGGGTaGTGCTGTATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SEYKLILTGNRNEIYTPCHFVQG*CCILSH
Trigger: ATGAGAAAGAATACAGCACAACCCTTGAACAAAATG...GCATGGTGTGTATATTTCATTGCGATTTCCTGTTAAGATGAGTTTGTACTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 72 bp CCACCTCCTGGTGGCAGTTCGGGCCCCACCGCTCCCTaGAGAGGAAGCTCTGCACTGCCCAGCTCCACTTCT +
Preference number: 6 (lower is better)
Translates to: PPPGGSSGPTAP*RGSSALPSSTS
Trigger: AGAAGTGGAGCTGGGCAGTGCAGAGCTTCCTCTCCAGGGAGCGGTGGGGCCCGAACTGCCACCAGGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 72 bp ATGAAAAGCATCCTGGGCCAGGGCTGCTCCTGCCACTaGAGTCGTGACCGGTCCGTCCCCGTCCACAGGGCA +
Preference number: 6 (lower is better)
Translates to: MKSILGQGCSCH*SRDRSVPVHRA
Trigger: TGCCCTGTGGACGGGGACGGACCGGTCACGACTGCAGTGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 72 bp GAGGAAGCTCTGCACTGCCCAGCTCCACTTCTAGGGTaGGCGATGCTGGAGGAGACACGCGGGGCTTCCGTT +
Preference number: 6 (lower is better)
Translates to: EEALHCPAPLLG*AMLEETRGASV
Trigger: AACGGAAGCCCCGCGTGTCTCCTCCAGCATCGCCCACCCTAGAAGTGGAGCTGGGCAGTGCAGAGCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CAA 90 bp CCTGGCGAGGAGGTGGAGCGATGGGAACTGCGGAGTCCAGGGAACTaGCCTTCCTATGAAAAGCATCCTGGGCCAGGGCTGCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PGEEVERWELRSPGN*PSYEKHPGPGLLLP
Trigger: TGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCATAGGAAGGCAAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 72 bp ACTTGCCTTCCTATGAAAAGCATCCTGGGCCAGGGCTaGTCCTGCCACTGCAGTCGTGACCGGTCCGTCCCC +
Preference number: 6 (lower is better)
Translates to: TCLPMKSILGQG*SCHCSRDRSVP
Trigger: GGGGACGGACCGGTCACGACTGCAGTGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCATAGGAAGGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 72 bp CCAGGGAGGAACAGGCCTGGCGAGGAGGTGGAGCGATaGGAACTGCGGAGTCCAGGGAACTTGCCTTCCTAT +
Preference number: 6 (lower is better)
Translates to: PGRNRPGEEVER*ELRSPGNLPSY
Trigger: ATAGGAAGGCAAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCCTGTTCCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 72 bp GACTCATTCAAGACAGGACCCAGGGAGGAACAGGCCTaGCGAGGAGGTGGAGCGATGGGAACTGCGGAGTCC +
Preference number: 6 (lower is better)
Translates to: DSFKTGPREEQA*RGGGAMGTAES
Trigger: GGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCCTGTTCCTCCCTGGGTCCTGTCTTGAATGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS GCA 72 bp GGAACAGGCCTGGCGAGGAGGTGGAGCGATGGGAACTaGGGAGTCCAGGGAACTTGCCTTCCTATGAAAAGC +
Preference number: 6 (lower is better)
Translates to: GTGLARRWSDGN*GVQGTCLPMKS
Trigger: GCTTTTCATAGGAAGGCAAGTTCCCTGGACTCCGCAGTTCCCATCGCTCCACCTCCTCGCCAGGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS CCA 72 bp GGGCTCCAGGATTGCACCCGAGGCTGCTGTCCGCCCTaGGAGCTCTGCAGATCTTTTGAGCTACAATTAGCC +
Preference number: 6 (lower is better)
Translates to: GLQDCTRGCCPP*ELCRSFELQLA
Trigger: GGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS CCA 72 bp ACACTGGGGCGAGTCTGCGGCCGTAAATGTGCAATCTaGTCAGTGGATCCTGCCATGGGCCTCGGTCCCATT +
Preference number: 6 (lower is better)
Translates to: TLGRVCGRKCAI*SVDPAMGLGPI
Trigger: AATGGGACCGAGGCCCATGGCAGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS TCA 72 bp ATGGGAACTGCGGAGTCCAGGGAACTTGCCTTCCTATaGAAAGCATCCTGGGCCAGGGCTGCTCCTGCCACT +
Preference number: 6 (lower is better)
Translates to: MGTAESRELAFL*KASWARAAPAT
Trigger: AGTGGCAGGAGCAGCCCTGGCCCAGGATGCTTTTCATAGGAAGGCAAGTTCCCTGGACTCCGCAGTTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284637.14
CDS TCA 72 bp CGGTGGCGCTCCAAGGGCAGCTTGGTAGGGAACATCTaGTGGGAAAGTAAACGAGGGGCCAGTTGTCACTGG +
Preference number: 6 (lower is better)
Translates to: RWRSKGSLVGNI*WESKRGASCHW
Trigger: CCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAGCGCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511421.5
CDS GCA 72 bp TGGTGTTCTTCTTGGTGTCGGAGTGCTTTGGGGCAGTaGTGCTCTGGGCTGCTGCCGAGGAACATTCTCCAG +
Preference number: 6 (lower is better)
Translates to: WCSSWCRSALGQ*CSGLLPRNILQ
Trigger: CTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS GCA 72 bp GATTGCACCCGAGGCTGCTGTCCGCCCTGGGAGCTCTaGAGATCTTTTGAGCTACAATTAGCCACAGTGCTG +
Preference number: 6 (lower is better)
Translates to: DCTRGCCPPWEL*RSFELQLATVL
Trigger: CAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS CCA 72 bp TTCTTGGTGTCGGAGTGCTTTGGGGCAGTGCTGCTCTaGGCTGCTGCCGAGGAACATTCTCCAGCATCAACT +
Preference number: 6 (lower is better)
Translates to: FLVSECFGAVLL*AAAEEHSPAST
Trigger: AGTTGATGCTGGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS TCA 72 bp AGGCTGCTGTCCGCCCTGGGAGCTCTGCAGATCTTTTaGGCTACAATTAGCCACAGTGCTGCTCTGAGACCT +
Preference number: 6 (lower is better)
Translates to: RLLSALGALQIF*ATISHSAALRP
Trigger: AGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS TCA 72 bp CACCCGAGCCAACAAGAGTCCTGCACTCGGGACATCTaGGTTCATTTCGAGAACCTACGATCCCCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: HPSQQESCTRDI*VHFENLRSPAN
Trigger: GTTTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS CCA 72 bp ACGATCCCCAGCAAACATCGCTTGCAAAACGTATGCTaGCAAGGCAAGACCTTCGCAGAAGCATCAAGGCGC +
Preference number: 6 (lower is better)
Translates to: TIPSKHRLQNVC*QGKTFAEASRR
Trigger: GCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS GCA 72 bp CCTACGATCCCCAGCAAACATCGCTTGCAAAACGTATaGTGGCAAGGCAAGACCTTCGCAGAAGCATCAAGG +
Preference number: 6 (lower is better)
Translates to: PTIPSKHRLQNV*WQGKTFAEASR
Trigger: CCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS GCA 72 bp CATTTCGAGAACCTACGATCCCCAGCAAACATCGCTTaGAAAACGTATGCTGGCAAGGCAAGACCTTCGCAG +
Preference number: 6 (lower is better)
Translates to: HFENLRSPANIA*KTYAGKARPSQ
Trigger: CTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGTAGGTTCTCGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS TCA 72 bp ATTCAAAGTTCCAAGGGCAGCTTGGTAGGGAACATCTaGTGGGAAAGTAAACGAGGGGCCAGTTGTCACTGG +
Preference number: 6 (lower is better)
Translates to: IQSSKGSLVGNI*WESKRGASCHW
Trigger: CCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS CAA 72 bp TCATTTCGAGAACCTACGATCCCCAGCAAACATCGCTaGCAAAACGTATGCTGGCAAGGCAAGACCTTCGCA +
Preference number: 6 (lower is better)
Translates to: SFREPTIPSKHR*QNVCWQGKTFA
Trigger: TGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGTAGGTTCTCGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS CAA 90 bp CATCTGAGTTCATTTCGAGAACCTACGATCCCCAGCAAACATCGCTaGCAAAACGTATGCTGGCAAGGCAAGACCTTCGCAGAAGCATCA +
Preference number: 6 (lower is better)
Translates to: HLSSFREPTIPSKHR*QNVCWQGKTFAEAS
Trigger: TGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGTTTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000502315.1
ENST00000510806.1
CDS GCA 72 bp TATGGATATATAGCAACATACACACTGGGGCGAGTCTaGGGCCGTAAATGTGCAATCTGGTCAGTGGATCCT +
Preference number: 6 (lower is better)
Translates to: YGYIATYTLGRV*GRKCAIWSVDP
Trigger: AGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGTGTATGTTGCTATATATCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS TCA 72 bp AGATCTTTTGAGCTACAATTAGCCACAGTGCTGCTCTaGGACCTTAATGCATTTGTGCAGTTGGTCCCACTT +
Preference number: 6 (lower is better)
Translates to: RSFELQLATVLL*DLNAFVQLVPL
Trigger: AAGTGGGACCAACTGCACAAATGCATTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284637.14
ENST00000508685.1
CDS GCA 72 bp ACTCCTGGCACAGGAGGCTTATCCCATTCTATCAGCTaGTTAGCAGCCGAGTTAAACTCAACATATGAAATT +
Preference number: 6 (lower is better)
Translates to: TPGTGGLSHSIS*LAAELNSTYEI
Trigger: AATTTCATATGTTGAGTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5
CDS CAA 72 bp TCATCCACTTGTCTTCGCAAAATGATGATGTCACCTTaGCTGAATTTAAGGTCTCCAGGCTCTTTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SSTCLRKMMMSP*LNLRSPGSFPS
Trigger: TGAAGGAAAAGAGCCTGGAGACCTTAAATTCAGCAAAGGTGACATCATCATTTTGCGAAGACAAGTGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284637.14
ENST00000508685.1
ENST00000511421.5