RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3PXD2A (Homo sapiens)

Ensembl gene IDs: ENSG00000107957

Ensembl transcript IDs: ENST00000315994.6, ENST00000355946.6, ENST00000369774.8, ENST00000420222.1

Found 1115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCTCTCGCCCTGGCTAGGGCTAGGAGGCCAGGCGCACAAGGCCTaGTACCCCCTGGCCATGTCGGAGAAGGACTGGCATGCACCCTTC +
Preference number: 1 (lower is better)
Translates to: ALSPWLGLGGQAHKA*YPLAMSEKDWHAPF
Trigger: GAAGGGTGCATGCCAGTCCTTCTCCGACATGGCCAGGGGGTACCAGGCCTTGTGCGCCTGGCCTCCTAGCCCTAGCCAGGGCGAGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp CTCCCTCCTGGCCTGGCTGGCGCACTAGTGACTGAACTGGCTCAGTaGAGACATCTGAGGAGCGAGGCTGCAGGGCCCTCCCCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: LPPGLAGALVTELAQ*RHLRSEAAGPSPWK
Trigger: CTTCCAGGGGGAGGGCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGTCACTAGTGCGCCAGCCAGGCCAGGAGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp GACATGCTCTGCACTCCCTCCTGGCCTGGCTGGCGCACTAGTGACTaGACTGGCTCAGTGCAGACATCTGAGGAGCGAGGCTGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: DMLCTPSWPGWRTSD*TGSVQTSEERGCRA
Trigger: GGCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGTCACTAGTGCGCCAGCCAGGCCAGGAGGGAGTGCAGAGCATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp GGGCAGGAAAGGCAGGCTCTCGGGAGCACTGTGGTCCAGTCCAACTaGGATGCTCTGTGCTTGGCAGACATGCTCTGCACTCCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: GQERQALGSTVVQSN*DALCLADMLCTPSW
Trigger: CCAGGAGGGAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCCTGCCTTTCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp GGAAAGGCAGGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATaGTCTGTGCTTGGCAGACATGCTCTGCACTCCCTCCTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: GKAGSREHCGPVQLR*SVLGRHALHSLLAW
Trigger: CCAGGCCAGGAGGGAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCCTGCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp CTCCAGATGGGTCAGAGCCCTAGGCCCCCTCCCTCCTCTGCCTGCTaGCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAA +
Preference number: 1 (lower is better)
Translates to: LQMGQSPRPPPSSAC*RQYPSASQSSSVAQ
Trigger: TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGAGGAGGGAGGGGGCCTAGGGCTCTGACCCATCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp TTCCTCCAGATGGGTCAGAGCCCTAGGCCCCCTCCCTCCTCTGCCTaGTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCT +
Preference number: 1 (lower is better)
Translates to: FLQMGQSPRPPPSSA*CRQYPSASQSSSVA
Trigger: AGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGAGGAGGGAGGGGGCCTAGGGCTCTGACCCATCTGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp CACCCACCTGTTCCACAGCTAGGATTCCTTCAGCACCCCGCTCCCTaGCTCTTGCTCTCTGAGCGCCACTGGTATTCCCTCCATTGTCCC +
Preference number: 1 (lower is better)
Translates to: HPPVPQLGFLQHPAP*LLLSERHWYSLHCP
Trigger: GGGACAATGGAGGGAATACCAGTGGCGCTCAGAGAGCAAGAGGCAGGGAGCGGGGTGCTGAAGGAATCCTAGCTGTGGAACAGGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp GCCTGGCCCAGAAGCAGGCTTGAGCTCAGAAGACACCCCCAAGCCTaGAAGCCAGTGGTGGCTTCTAATGTACCCACCTGTGGTAGGCGT +
Preference number: 1 (lower is better)
Translates to: AWPRSRLELRRHPQA*KPVVASNVPTCGRR
Trigger: ACGCCTACCACAGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCTTCTGAGCTCAAGCCTGCTTCTGGGCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp CCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCAGGGATTACTaGAGTCTGCCTTGCCCGGGAGTCACTTCCTGCAGACCTCTGAGT +
Preference number: 1 (lower is better)
Translates to: PHPAMQSTCSRFRDY*SLPCPGVTSCRPLS
Trigger: ACTCAGAGGTCTGCAGGAAGTGACTCCCGGGCAAGGCAGACTTCAGTAATCCCTGAAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp GCAGGCTTGAGCTCAGAAGACACCCCCAAGCCTGAAAGCCAGTGGTaGCTTCTAATGTACCCACCTGTGGTAGGCGTGGCAATGCCCAGG +
Preference number: 1 (lower is better)
Translates to: AGLSSEDTPKPESQW*LLMYPPVVGVAMPR
Trigger: CCTGGGCATTGCCACGCCTACCACAGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCTTCTGAGCTCAAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp ACAGCCCGTCTACAGTCATTGGACATAGGGGAAACCCACAGGGCATaGGGCACACCTGCTGCTCAGGGTTGCCCCTTTCCAGCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: TARLQSLDIGETHRA*GTPAAQGCPFPALS
Trigger: AGAGAGAGCTGGAAAGGGGCAACCCTGAGCAGCAGGTGTGCCCCATGCCCTGTGGGTTTCCCCTATGTCCAATGACTGTAGACGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp CAGGCCCTGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTaGGCGGCTCAAGGTTCTCACATCCCCCAAAAAGATCTGGTGACT +
Preference number: 1 (lower is better)
Translates to: QALLQACGNWCLTRV*AAQGSHIPQKDLVT
Trigger: AGTCACCAGATCTTTTTGGGGGATGTGAGAACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCAGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp GAAGCAGGCTTGAGCTCAGAAGACACCCCCAAGCCTGAAAGCCAGTaGTGGCTTCTAATGTACCCACCTGTGGTAGGCGTGGCAATGCCC +
Preference number: 1 (lower is better)
Translates to: EAGLSSEDTPKPESQ*WLLMYPPVVGVAMP
Trigger: GGGCATTGCCACGCCTACCACAGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCTTCTGAGCTCAAGCCTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp GGATCACAGCCCAAATATCAGGACACTGGGGTGAGAGAGGGCTGCTaGGAGTCATTTTTAGGCCAGGTCTCTCTGAGCAGCTGGCTGCAC +
Preference number: 1 (lower is better)
Translates to: GSQPKYQDTGVREGC*ESFLGQVSLSSWLH
Trigger: GTGCAGCCAGCTGCTCAGAGAGACCTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTGGGCTGTGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp GAAGGATCACAGCCCAAATATCAGGACACTGGGGTGAGAGAGGGCTaGTGGGAGTCATTTTTAGGCCAGGTCTCTCTGAGCAGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: EGSQPKYQDTGVREG*WESFLGQVSLSSWL
Trigger: CAGCCAGCTGCTCAGAGAGACCTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTGGGCTGTGATCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp AAGGTTCTGGAGCTCCAGAGACATCCACCAGTCCCCACCCAGCCATaGAGTCCACATGCTCACGCTTCAGGGATTACTGAAGTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: KVLELQRHPPVPTQP*SPHAHASGITEVCL
Trigger: AAGGCAGACTTCAGTAATCCCTGAAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGAGCTCCAGAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp GCTCAGTGCAGACATCTGAGGAGCGAGGCTGCAGGGCCCTCCCCCTaGAAGATAGCTACATTGAAGGTTCTTTACCTGACAGTCACTCTA +
Preference number: 1 (lower is better)
Translates to: AQCRHLRSEAAGPSP*KIATLKVLYLTVTL
Trigger: TAGAGTGACTGTCAGGTAAAGAACCTTCAATGTAGCTATCTTCCAGGGGGAGGGCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp CAGGAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTaGTCTGGCCCTGCAGTTGGGACTAAACTTATATGCACCTGCAGG +
Preference number: 1 (lower is better)
Translates to: QEGLAQPSTHFPGSV*SGPAVGTKLICTCR
Trigger: CCTGCAGGTGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp TTGCATGCTAATCCCAACCTTATAGGCAGGCTGGGATCAAGACCTTaGAAGGTAGGGCTCTCCACCCAGTCTGTAAGCACCAGTGTGCCC +
Preference number: 1 (lower is better)
Translates to: LHANPNLIGRLGSRP*KVGLSTQSVSTSVP
Trigger: GGGCACACTGGTGCTTACAGACTGGGTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAGCCTGCCTATAAGGTTGGGATTAGCATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp AGTGTTTGGTCTGGCCCTGCAGTTGGGACTAAACTTATATGCACCTaGAGGTCTTGTTGGGTGCACCGTGAGCAAGTTCTCACCCCAACC +
Preference number: 1 (lower is better)
Translates to: SVWSGPAVGTKLICT*RSCWVHREQVLTPT
Trigger: GGTTGGGGTGAGAACTTGCTCACGGTGCACCCAACAAGACCTGCAGGTGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACCAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp CAGGCGCACAAGGCCTGGTACCCCCTGGCCATGTCGGAGAAGGACTaGCATGCACCCTTCTTGCTTCAAGTATTAATATTCTCTTTGGGT +
Preference number: 1 (lower is better)
Translates to: QAHKAWYPLAMSEKD*HAPFLLQVLIFSLG
Trigger: ACCCAAAGAGAATATTAATACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCCGACATGGCCAGGGGGTACCAGGCCTTGTGCGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp ACTGGCTTTGGATTGGACAGTCAAAGGGAAGTGGGCAAAACCAGCTaGGAACCCGGGAGCTGGATGCATATATTCTGGAATCAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: TGFGLDSQREVGKTS*EPGSWMHIFWNQGL
Trigger: CAGGCCCTGATTCCAGAATATATGCATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCACTTCCCTTTGACTGTCCAATCCAAAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp CTCTTGCTCTCTGAGCGCCACTGGTATTCCCTCCATTGTCCCCAATaGGCCCTGGCATCCATCTTGGTAATATTGCACTTTTCCTGTCTC +
Preference number: 1 (lower is better)
Translates to: LLLSERHWYSLHCPQ*ALASILVILHFSCL
Trigger: GAGACAGGAAAAGTGCAATATTACCAAGATGGATGCCAGGGCTCATTGGGGACAATGGAGGGAATACCAGTGGCGCTCAGAGAGCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp GCACAAGGCCTGGTACCCCCTGGCCATGTCGGAGAAGGACTGGCATaGACCCTTCTTGCTTCAAGTATTAATATTCTCTTTGGGTTTGCA +
Preference number: 1 (lower is better)
Translates to: AQGLVPPGHVGEGLA*TLLASSINILFGFA
Trigger: TGCAAACCCAAAGAGAATATTAATACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCCGACATGGCCAGGGGGTACCAGGCCTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp CAACAAGACGACAAAGGAGGTTGCCTTCCTCCCAGATGTGCCCAATaGAGTCTGAACTCTGGTTCTAATTTGTGGAGGTGGGTCCCTACT +
Preference number: 1 (lower is better)
Translates to: QQDDKGGCLPPRCAQ*SLNSGSNLWRWVPT
Trigger: AGTAGGGACCCACCTCCACAAATTAGAACCAGAGTTCAGACTCCATTGGGCACATCTGGGAGGAAGGCAACCTCCTTTGTCGTCTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp CAACCCAGAGGAAACTTCCCATTCTGTTGCTTTCTCTACCGGTGCTaGGGAAGGAGGCCAGATTGGTACCTGTTGTGGGAAGTTTTGTCT +
Preference number: 1 (lower is better)
Translates to: QPRGNFPFCCFLYRC*GRRPDWYLLWEVLS
Trigger: AGACAAAACTTCCCACAACAGGTACCAATCTGGCCTCCTTCCTCAGCACCGGTAGAGAAAGCAACAGAATGGGAAGTTTCCTCTGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp ATTCAAACATACACCAGAAGGATCACAGCCCAAATATCAGGACACTaGGGTGAGAGAGGGCTGCTGGGAGTCATTTTTAGGCCAGGTCTC +
Preference number: 1 (lower is better)
Translates to: IQTYTRRITAQISGH*GERGLLGVIFRPGL
Trigger: GAGACCTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTGGGCTGTGATCCTTCTGGTGTATGTTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp GTCAAAGGGAAGTGGGCAAAACCAGCTGAGAACCCGGGAGCTGGATaGATATATTCTGGAATCAGGGCCTGCAAACTCAAAGATTGGTTT +
Preference number: 1 (lower is better)
Translates to: VKGKWAKPAENPGAG*IYSGIRACKLKDWF
Trigger: AAACCAATCTTTGAGTTTGCAGGCCCTGATTCCAGAATATATGCATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCACTTCCCTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp TTGTGGTCACTGCTCTTTGAGCCATACAACTTGAGAGACTGGCTTTaGATTGGACAGTCAAAGGGAAGTGGGCAAAACCAGCTGAGAACC +
Preference number: 1 (lower is better)
Translates to: LWSLLFEPYNLRDWL*IGQSKGSGQNQLRT
Trigger: GGTTCTCAGCTGGTTTTGCCCACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp CTGGTTCTAATTTGTGGAGGTGGGTCCCTACTGTATGACCCATTGTaGTCACTGCTCTTTGAGCCATACAACTTGAGAGACTGGCTTTGG +
Preference number: 1 (lower is better)
Translates to: LVLICGGGSLLYDPL*SLLFEPYNLRDWLW
Trigger: CCAAAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGTCATACAGTAGGGACCCACCTCCACAAATTAGAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp ATACAACTTGAGAGACTGGCTTTGGATTGGACAGTCAAAGGGAAGTaGGCAAAACCAGCTGAGAACCCGGGAGCTGGATGCATATATTCT +
Preference number: 1 (lower is better)
Translates to: IQLERLALDWTVKGK*AKPAENPGAGCIYS
Trigger: AGAATATATGCATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAGTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp CTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTaGGGTCTCTTTCAGTCCTGCATTTTAATGACTCTATTACTTACA +
Preference number: 1 (lower is better)
Translates to: LSLGRSNRKGWDRDL*GLFQSCILMTLLLT
Trigger: TGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAGAGACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp TACTGTATGACCCATTGTGGTCACTGCTCTTTGAGCCATACAACTTaGGAGACTGGCTTTGGATTGGACAGTCAAAGGGAAGTGGGCAAA +
Preference number: 1 (lower is better)
Translates to: YCMTHCGHCSLSHTT*ETGFGLDSQREVGK
Trigger: TTTGCCCACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGTCATACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 90 bp GCTGGATGCATATATTCTGGAATCAGGGCCTGCAAACTCAAAGATTaGTTTGTGGCTGGTGACTTCTCTCTGCTAAGTAAATCAATGACC +
Preference number: 1 (lower is better)
Translates to: AGCIYSGIRACKLKD*FVAGDFSLLSKSMT
Trigger: GGTCATTGATTTACTTAGCAGAGAGAAGTCACCAGCCACAAACCAATCTTTGAGTTTGCAGGCCCTGATTCCAGAATATATGCATCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 90 bp GGAAAGGAAAACAAAGCACCAAATGCTGCATCTTCGGGCATTATATaGACCTCAATAATGACCTCAGAAGGGCTCATTATGGTTAAAGTT +
Preference number: 1 (lower is better)
Translates to: GKENKAPNAASSGII*TSIMTSEGLIMVKV
Trigger: AACTTTAACCATAATGAGCCCTTCTGAGGTCATTATTGAGGTTCATATAATGCCCGAAGATGCAGCATTTGGTGCTTTGTTTTCCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 90 bp AAGAAAAAGGTCTTGAAACGGAAAGGAAAACAAAGCACCAAATGCTaGATCTTCGGGCATTATATGAACCTCAATAATGACCTCAGAAGG +
Preference number: 1 (lower is better)
Translates to: KKKVLKRKGKQSTKC*IFGHYMNLNNDLRR
Trigger: CCTTCTGAGGTCATTATTGAGGTTCATATAATGCCCGAAGATGCAGCATTTGGTGCTTTGTTTTCCTTTCCGTTTCAAGACCTTTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCAGCACCCCGCTCCCTaGCTCTTGCTCTCTGAGCGC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRQHPAP*LLLSER
Trigger: GCGCTCAGAGAGCAAGAGGCAGGGAGCGGGGTGCTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGTGTCCTCCATGGGGTaGCCCACGGAGAGCGGGCTC +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRVSSMG*PTESGL
Trigger: GAGCCCGCTCTCCGTGGGGCACCCCATGGAGGACAC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTCTGGGTCCCAGGCCTaGGACTCCCTGGTCCATTCC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSGSQA*DSLVHS
Trigger: GGAATGGACCAGGGAGTCCCAGGCCTGGGACCCAGA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCAGTCCAGGGACCCTaGCAGCTGAATCGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPVQGP*QLNRWL
Trigger: CAGCCACCGATTCAGCTGCCAGGGTCCCTGGACTGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTCTGCTCCAGGGACTaGGGCCTAGAGGTCAAGGGC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLCSRD*GLEVKG
Trigger: GCCCTTGACCTCTAGGCCCCAGTCCCTGGAGCAGAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCTGAGGAGCGAGGCTaGAGGGCCCTCCCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSEERG*RALPLE
Trigger: TTCCAGGGGGAGGGCCCTGCAGCCTCGCTCCTCAGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCTGAGGAGCGAGGCTaGAGGGCCCTCCCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSEERG*RALPLE
Trigger: TTCCAGGGGGAGGGCCCTGCAGCCTCGCTCCTCAGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCAGCACCCCGCTCCCTaGCTCTTGCTCTCTGAGCGC +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVQHPAP*LLLSER
Trigger: GCGCTCAGAGAGCAAGAGGCAGGGAGCGGGGTGCTG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCGAGGGCCTGCCTCTaGTCCAGGGACTGGGGCCTA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPRACL*SRDWGL
Trigger: TAGGCCCCAGTCCCTGGAGCAGAGGCAGGCCCTCGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGCCCCAGGCCCTGCTaGAGGCTTGTGGGAATTGGT +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSPRPC*RLVGIG
Trigger: ACCAATTCCCACAAGCCTGCAGCAGGGCCTGGGGCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGCATGGGGCACACCTaGTGCTCAGGGTTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGMGHT*CSGLPL
Trigger: AAGGGGCAACCCTGAGCAGCAGGTGTGCCCCATGCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCACCGCTCATCCAGTaGGCGGCCAGAGAGGCACAC +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSPLIQ*AAREAH
Trigger: GTGTGCCTCTCTGGCCGCCCACTGGATGAGCGGTGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCAGCCCTGCCCAGCTaGGGAACACACGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPALPS*GTHAEW
Trigger: CCATTCTGCGTGTGTTCCCCAGCTGGGCAGGGCTGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp GTACTGGAGGTGGAGGGAACAAGCCACAGGGACGTCCCTGTCACCTaGAGGGGCAGAGCTCTGAGGCTCCAACCCAGAGGAAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: VLEVEGTSHRDVPVT*RGRALRLQPRGNFP
Trigger: TGGGAAGTTTCCTCTGGGTTGGAGCCTCAGAGCTCTGCCCCTCAAGGTGACAGGGACGTCCCTGTGGCTTGTTCCCTCCACCTCCAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGACAGGGGGCATCTTTaGGGTCACCCATTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRDRGHL*GHPFCS
Trigger: ACTGCAGAATGGGTGACCTCAAAGATGCCCCCTGTC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTTTCTCTACCGGTGCTaGGGAAGGAGGCCAGATTGG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRFLYRC*GRRPDW
Trigger: CCAATCTGGCCTCCTTCCTCAGCACCGGTAGAGAAA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCCTCCTCTGCCTGCTaGCGGCAGTATCCTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPSSAC*RQYPSA
Trigger: TGCTGAAGGATACTGCCGGCAGCAGGCAGAGGAGGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGGGTGGGAGTCAGCCTaGTCGATGACACGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLGWESA*SMTRLQ
Trigger: CTGCAGACGTGTCATCGAGCAGGCTGACTCCCACCC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCTACCTTCCAGCTGTaGGATGGCTTGGACAGGGGG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPTFQL*DGLDRG
Trigger: CCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTAGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTGGGGTCTCCCACATaGCCTGTCCCAGATGGCATG +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLGSPT*PVPDGM
Trigger: CATGCCATCTGGGACAGGCCATGTGGGAGACCCCAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGTACTGTGTCCTCCATaGGGTGCCCCACGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPVLCPP*GAPRRA
Trigger: CGCTCTCCGTGGGGCACCCCATGGAGGACACAGTAC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCAGGGCCCTCCCCCTaGAAGATAGCTACATTGAAG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRAGPSP*KIATLK
Trigger: CTTCAATGTAGCTATCTTCCAGGGGGAGGGCCCTGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGAAACCCACAGGGCATaGGGCACACCTGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVETHRA*GTPAAQ
Trigger: CTGAGCAGCAGGTGTGCCCCATGCCCTGTGGGTTTC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCCCACCTTATGGCCTaGGGACCCAGGTTTGCAGGA +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAHLMA*GPRFAG
Trigger: TCCTGCAAACCTGGGTCCCCAGGCCATAAGGTGGGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAGACACCCCCAAGCCTaGAAGCCAGTGGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRRHPQA*KPVVAS
Trigger: AGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTGGCAGACATGCTCTaGACTCCCTCCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLADML*TPSWPG
Trigger: GCCAGGCCAGGAGGGAGTGCAGAGCATGTCTGCCAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGGTCAAGGGCCCCATaGCTGAATCCCTTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRRSRAP*LNPFLL
Trigger: CAGAAGAAAGGGATTCAGGCATGGGGCCCTTGACCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTGTCTCACCAGGGTGTaGGCGGCTCAAGGTTCTCAC +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLCLTRV*AAQGSH
Trigger: GTGAGAACCTTGAGCCGCGCACACCCTGGTGAGACA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAGCCCCAGGCCCTGCTaGAGGCTTGTGGGAATTGGT +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPSPRPC*RLVGIG
Trigger: ACCAATTCCCACAAGCCTGCAGCAGGGCCTGGGGCT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCTGGGGTCTCCCACATaGCCTGTCCCAGATGGCATG +
Preference number: 2 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLGSPT*PVPDGM
Trigger: CATGCCATCTGGGACAGGCCATGTGGGAGACCCCAG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCAGGGATACCTGGGGTaGCAAGATGCCAGCAATCAA +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRQGYLG*QDASNQ
Trigger: TTGATTGCTGGCATCTTGCCACCCCAGGTATCCCTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGAGATGCTCTGTGCTTaGCAGACATGCTCTGCACTC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCREMLCA*QTCSAL
Trigger: GAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGAAACCCACAGGGCATaGGGCACACCTGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPETHRA*GTPAAQ
Trigger: CTGAGCAGCAGGTGTGCCCCATGCCCTGTGGGTTTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCAAATATCAGGACACTaGGGTGAGAGAGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRQISGH*GERGLL
Trigger: CAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTTCATTTTGGAGCCTaGGATGACTGCCTAGGCCAC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLHFGA*DDCLGH
Trigger: GTGGCCTAGGCAGTCATCCCAGGCTCCAAAATGAAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp CATGCAGTCCACATGCTCACGCTTCAGGGATTACTGAAGTCTGCCTaGCCCGGGAGTCACTTCCTGCAGACCTCTGAGTACCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: HAVHMLTLQGLLKSA*PGSHFLQTSEYLVG
Trigger: CCCCACCAGGTACTCAGAGGTCTGCAGGAAGTGACTCCCGGGCAAGGCAGACTTCAGTAATCCCTGAAGCGTGAGCATGTGGACTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTGGCGCACTAGTGACTaGACTGGCTCAGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVWRTSD*TGSVQT
Trigger: TGTCTGCACTGAGCCAGTTCAGTCACTAGTGCGCCA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGTGTCCTCCATGGGGTaGCCCACGGAGAGCGGGCTC +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKVSSMG*PTESGL
Trigger: GAGCCCGCTCTCCGTGGGGCACCCCATGGAGGACAC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAACCTCTCCCGAAACATaGAAAGGAACTGCCCGCCCA +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRTSPET*KGTARP
Trigger: TGGGCGGGCAGTTCCTTTGCATGTTTCGGGAGAGGT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAGCCCCAAATTTTTCTaGCAGGCGCCAAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSPKFF*QAPSSS
Trigger: GCTGGAGCTTGGCGCCTGCCAGAAAAATTTGGGGCT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCAGTCCAGGGACCCTaGCAGCTGAATCGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPVQGP*QLNRWL
Trigger: CAGCCACCGATTCAGCTGCCAGGGTCCCTGGACTGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACTCTGCACTCCCTCCTaGCCTGGCTGGCGCACTAGT +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLCTPS*PGWRTS
Trigger: ACTAGTGCGCCAGCCAGGCCAGGAGGGAGTGCAGAG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCTCTCGGGAGCACTGTaGTCCAGTCCAACTGAGATG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLLSGAL*SSPTEM
Trigger: CATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCGAAGACTGGGGCATaGCAATCCCTGTTCACTGCC +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAKTGA*QSLFTA
Trigger: GGCAGTGAACAGGGATTGCCATGCCCCAGTCTTCGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTCTCTGAGCGCCACTaGTATTCCCTCCATTGTCCC +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLSERH*YSLHCP
Trigger: GGGACAATGGAGGGAATACCAGTGGCGCTCAGAGAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTCCCTTTCTTCTGGGTaGATCTGGCAGGGACCCCTA +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSLSSG*IWQGPL
Trigger: TAGGGGTCCCTGCCAGATCCACCCAGAAGAAAGGGA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTTTGTATGGACTCTCTaGGTGTGGAGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLFVWTL*VWSPGR
Trigger: CCTGCCTGGGCTCCACACCCAGAGAGTCCATACAAA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCATGTAATCCATTGGTaGAGTCCCTATGGTGCACAG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRHVIHW*SPYGAQ
Trigger: CTGTGCACCATAGGGACTTCACCAATGGATTACATG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAACTGAACTGGCTCAGTaGAGACATCTGAGGAGCGAG +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRTELAQ*RHLRSE
Trigger: CTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCCACTTTTCCTGGATaGCTGAGCAACTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPTFPG*LSNSQP
Trigger: TGGCTGGGAGTTGCTCAGGCATCCAGGAAAAGTGGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACTTCCTCACTCAGTGTaGGCACCCCCATCCCCTACC +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLPHSV*APPSPT
Trigger: GGTAGGGGATGGGGGTGCCCACACTGAGTGAGGAAG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACAGCTTTCTTGGCTCTaGGTCCCAGGCCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQQLSWL*VPGLGL
Trigger: GAGTCCCAGGCCTGGGACCCAGAGCCAAGAAAGCTG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACAGGGATACCTGGGGTaGCAAGATGCCAGCAATCAA +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRQGYLG*QDASNQ
Trigger: TTGATTGCTGGCATCTTGCCACCCCAGGTATCCCTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAAGCCTGAAAGCCAGTaGTGGCTTCTAATGTACCCA +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRKPESQ*WLLMYP
Trigger: TGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCACAGTGACAATGGCCTaGCCCAGAAGCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVTVTMA*PRSRLE
Trigger: CTCAAGCCTGCTTCTGGGCCAGGCCATTGTCACTGT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGAGATGCTCTGTGCTTaGCAGACATGCTCTGCACTC +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLEMLCA*QTCSAL
Trigger: GAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTACTCCCAGCCATCCTTaGGGCTGGATGTCACAATGT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLTPSHP*GWMSQC
Trigger: ACATTGTGACATCCAGCCCCAAGGATGGCTGGGAGT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCTTCTGGGTGGATCTaGCAGGGACCCCTATCATCT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSSGWI*QGPLSS
Trigger: AGATGATAGGGGTCCCTGCCAGATCCACCCAGAAGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTCTTCTGGGTGGATCTaGCAGGGACCCCTATCATCT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSSGWI*QGPLSS
Trigger: AGATGATAGGGGTCCCTGCCAGATCCACCCAGAAGA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCAAATATCAGGACACTaGGGTGAGAGAGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLQISGH*GERGLL
Trigger: CAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCAGGCTTGTGGGAATTaGTGTCTCACCAGGGTGTGC +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPQACGN*CLTRVC
Trigger: GCACACCCTGGTGAGACACCAATTCCCACAAGCCTG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCTGCTGCAGGCTTGTaGGAATTGGTGTCTCACCAG +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPAAGL*ELVSHQ
Trigger: CTGGTGAGACACCAATTCCCACAAGCCTGCAGCAGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp GGGCAGAGCTCTGAGGCTCCAACCCAGAGGAAACTTCCCATTCTGTaGCTTTCTCTACCGGTGCTGAGGAAGGAGGCCAGATTGGTACCT +
Preference number: 2 (lower is better)
Translates to: GQSSEAPTQRKLPIL*LSLPVLRKEARLVP
Trigger: AGGTACCAATCTGGCCTCCTTCCTCAGCACCGGTAGAGAAAGCAACAGAATGGGAAGTTTCCTCTGGGTTGGAGCCTCAGAGCTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAGGGACCCTGGCAGCTaGATCGGTGGCTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFRDPGS*IGGCEA
Trigger: GGCCTCACAGCCACCGATTCAGCTGCCAGGGTCCCT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCCAAAAAGATCTGGTaGCTTCTAGGCTTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPKKIW*LLGFLP
Trigger: AGGCAGGAAGCCTAGAAGTCACCAGATCTTTTTGGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCCAGTCCAACTGAGATaGTCTGTGCTTGGCAGACAT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVPVQLR*SVLGRH
Trigger: ATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGTTTGCAGGGTTTGTaGTGTGAGTTAGGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGLQGL*CELGGE
Trigger: CTCACCCCCTAACTCACAGCACAAACCCTGCAAACC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGGAGAAGGACTGGCATaGACCCTTCTTGCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLGEGLA*TLLASS
Trigger: ACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCAGGTCTTGTTGGGTaGACCGTGAGCAAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAGLVG*TVSKFS
Trigger: TGAGAACTTGCTCACGGTGCACCCAACAAGACCTGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAAACTTATATGCACCTaGAGGTCTTGTTGGGTGCAC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRKLICT*RSCWVH
Trigger: GTGCACCCAACAAGACCTGCAGGTGCATATAAGTTT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATCACCGCTCATCCAGTaGGCGGCCAGAGAGGCACAC +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKSPLIQ*AAREAH
Trigger: GTGTGCCTCTCTGGCCGCCCACTGGATGAGCGGTGA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCAATACCAGGGATACCTaGGGTGGCAAGATGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVNTRDT*GGKMPA
Trigger: TGCTGGCATCTTGCCACCCCAGGTATCCCTGGTATT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAATACCAGGGATACCTaGGGTGGCAAGATGCCAGCA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPNTRDT*GGKMPA
Trigger: TGCTGGCATCTTGCCACCCCAGGTATCCCTGGTATT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCTGAAAGCCAGTGGTaGCTTCTAATGTACCCACCT +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPESQW*LLMYPP
Trigger: AGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTATTACTTACAGCACTaGGGGTCAAGGAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVYYLQH*GSRRGG
Trigger: ACCCCCTCTCCTTGACCCCCAGTGCTGTAAGTAATA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGTCTCTCTGAGCAGCTaGCTGCACCACAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVVSLSS*LHHNRN
Trigger: ATTTCTGTTGTGGTGCAGCCAGCTGCTCAGAGAGAC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATGGACTCTCTGGGTGTaGAGCCCAGGCAGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKWTLWV*SPGRAH
Trigger: GTGAGCCCTGCCTGGGCTCCACACCCAGAGAGTCCA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGATTGGTACCTGTTGTaGGAAGTTTTGTCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRDWYLL*EVLSAE
Trigger: CTCTGCAGACAAAACTTCCCACAACAGGTACCAATC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp AGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCAGTaGGGACTAAACTTATATGCACCTGCAGGTCTTGTTGGGTGCACC +
Preference number: 2 (lower is better)
Translates to: SPPHTSQEVFGLALQ*GLNLYAPAGLVGCT
Trigger: GGTGCACCCAACAAGACCTGCAGGTGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCCCAGAAGCAGGCTTaGGCTCAGAAGACACCCCCA +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAQKQA*AQKTPP
Trigger: TGGGGGTGTCTTCTGAGCTCAAGCCTGCTTCTGGGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGTGGTCCAGTCCAACTaGGATGCTCTGTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQVVQSN*DALCLA
Trigger: TGCCAAGCACAGAGCATCTCAGTTGGACTGGACCAC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTCCTGCCTAGAAACTaGACTGAGGGCACCCAGTTT +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPFLPRN*TEGTQF
Trigger: AAACTGGGTGCCCTCAGTTCAGTTTCTAGGCAGGAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCCAAAAAGATCTGGTaGCTTCTAGGCTTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPKKIW*LLGFLP
Trigger: AGGCAGGAAGCCTAGAAGTCACCAGATCTTTTTGGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAACCTCTCCCGAAACATaGAAAGGAACTGCCCGCCCA +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQTSPET*KGTARP
Trigger: TGGGCGGGCAGTTCCTTTGCATGTTTCGGGAGAGGT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACAGCTTTCTTGGCTCTaGGTCCCAGGCCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKQLSWL*VPGLGL
Trigger: GAGTCCCAGGCCTGGGACCCAGAGCCAAGAAAGCTG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATTGGTGAAGTCCCTATaGTGCACAGGATATCTCAGC +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLVKSL*CTGYLS
Trigger: GCTGAGATATCCTGTGCACCATAGGGACTTCACCAA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAAGCCTGAAAGCCAGTaGTGGCTTCTAATGTACCCA +
Preference number: 2 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRKPESQ*WLLMYP
Trigger: TGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGACAGTTATGAAAGATaGTCTTTGCTGGCACCTGGG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLDSYER*SLLAPG
Trigger: CCCAGGTGCCAGCAAAGACCATCTTTCATAACTGTC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGTACTGTGTCCTCCATaGGGTGCCCCACGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFVLCPP*GAPRRA
Trigger: CGCTCTCCGTGGGGCACCCCATGGAGGACACAGTAC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTATTACTTACAGCACTaGGGGTCAAGGAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVYYLQH*GSRRGG
Trigger: ACCCCCTCTCCTTGACCCCCAGTGCTGTAAGTAATA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTAGCTGTGGGATTTTaGAAAAGTTGTTTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLAVGF*KSCFLS
Trigger: GGACAGGAAACAACTTTTCCAAAATCCCACAGCTAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGAAGGAGGCCAGATTaGTACCTGTTGTGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGRRPD*YLLWEV
Trigger: AACTTCCCACAACAGGTACCAATCTGGCCTCCTTCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTTTTCCCCAAAGCTGTaGGTCACTGATCCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLFSPKL*VTDPVF
Trigger: GAAGACAGGATCAGTGACCCACAGCTTTGGGGAAAA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCGCAAACCAAAGGCCTaGCATATAAGCCCCAAATCA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPRKPKA*HISPKS
Trigger: TGATTTGGGGCTTATATGTCAGGCCTTTGGTTTGCG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTGAAGTCGCTGAGATaGATGGGCAGCCCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLKSLR*MGSPGS
Trigger: TGAGCCTGGGCTGCCCATTCATCTCAGCGACTTCAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTTGAGCCATACAACTTaGGAGACTGGCTTTGGATTG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLLSHTT*ETGFGL
Trigger: CAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGTGCCCAATGGAGTCTaGACTCTGGTTCTAATTTGT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLVPNGV*TLVLIC
Trigger: ACAAATTAGAACCAGAGTTCAGACTCCATTGGGCAC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTTGGCAGACATGCTCTaGACTCCCTCCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFLADML*TPSWPG
Trigger: GCCAGGCCAGGAGGGAGTGCAGAGCATGTCTGCCAA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGTTTGCAGGGTTTGTaGTGTGAGTTAGGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGLQGL*CELGGE
Trigger: CTCACCCCCTAACTCACAGCACAAACCCTGCAAACC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTTCCAGCTGTGGGATaGCTTGGACAGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLPAVG*LGQGAS
Trigger: AGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTGGTGAAGTCCCTATaGTGCACAGGATATCTCAGC +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLVKSL*CTGYLS
Trigger: GCTGAGATATCCTGTGCACCATAGGGACTTCACCAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGACAGTTATGAAAGATaGTCTTTGCTGGCACCTGGG +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPDSYER*SLLAPG
Trigger: CCCAGGTGCCAGCAAAGACCATCTTTCATAACTGTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAAGGCACTGAGACACTaGGTCCCATGCTGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFKALRH*VPCCPA
Trigger: GGCAGGGCAGCATGGGACCCAGTGTCTCAGTGCCTT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTAGCCATCCTTGGGGCTaGATGTCACAATGTAAACAT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSHPWG*MSQCKH
Trigger: ATGTTTACATTGTGACATCCAGCCCCAAGGATGGCT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCAAAGATTGGTTTGTaGCTGGTGACTTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSKIGL*LVTSLC
Trigger: GCAGAGAGAAGTCACCAGCCACAAACCAATCTTTGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCTGGTTCTAATTTGTaGAGGTGGGTCCCTACTGTA +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSGSNL*RWVPTV
Trigger: TACAGTAGGGACCCACCTCCACAAATTAGAACCAGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp AACTGGGGTCTCCCACATGGCCTGTCCCAGATGGCATGTAATCCATaGGTGAAGTCCCTATGGTGCACAGGATATCTCAGCTTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: NWGLPHGLSQMACNP*VKSLWCTGYLSFLG
Trigger: GCCAAGAAAGCTGAGATATCCTGTGCACCATAGGGACTTCACCAATGGATTACATGCCATCTGGGACAGGCCATGTGGGAGACCCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTGAATCGGTGGCTGTaGGGCCCAATCTGTCCGAAA +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLNRWL*GPICPK
Trigger: TTTCGGACAGATTGGGCCTCACAGCCACCGATTCAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCACCCAAAATAGTCTGTaGAGATTAGGAAGAGACCGG +
Preference number: 2 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVTQNSL*RLGRDR
Trigger: CCGGTCTCTTCCTAATCTGCACAGACTATTTTGGGT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCAAAGCACCAAATGCTaGATCTTCGGGCATTATATG +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLQSTKC*IFGHYM
Trigger: CATATAATGCCCGAAGATGCAGCATTTGGTGCTTTG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCTGAAAGCCAGTGGTaGCTTCTAATGTACCCACCT +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPESQW*LLMYPP
Trigger: AGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCAGGGCCCTCCCCCTaGAAGATAGCTACATTGAAG +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAGPSP*KIATLK
Trigger: CTTCAATGTAGCTATCTTCCAGGGGGAGGGCCCTGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTCTGCACTCCCTCCTaGCCTGGCTGGCGCACTAGT +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILCTPS*PGWRTS
Trigger: ACTAGTGCGCCAGCCAGGCCAGGAGGGAGTGCAGAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTCTCGGGAGCACTGTaGTCCAGTCCAACTGAGATG +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLSGAL*SSPTEM
Trigger: CATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGACAGGGGGCATCTTTaGGGTCACCCATTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFDRGHL*GHPFCS
Trigger: ACTGCAGAATGGGTGACCTCAAAGATGCCCCCTGTC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCTGAATCGGTGGCTGTaGGGCCCAATCTGTCCGAAA +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFLNRWL*GPICPK
Trigger: TTTCGGACAGATTGGGCCTCACAGCCACCGATTCAG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTCAGTGCAGACATCTaGGGAGCGAGGCTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLSADI*GARLQG
Trigger: GCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCAGAGAGCTCTGCTTTaGGATTCTCAAAGACTAAAT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLQRALL*DSQRLN
Trigger: ATTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGCAATCCCTGTTCACTaGCCAAATCTACATGCTGTC +
Preference number: 2 (lower is better)
Translates to: SACCRQYPSASQSSSVAQAIPVH*PNLHAV
Trigger: GACAGCATGTAGATTTGGGCAGTGAACAGGGATTGC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAAACAAAGCACCAAATaGTGCATCTTCGGGCATTAT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLKQSTK*CIFGHY
Trigger: ATAATGCCCGAAGATGCAGCATTTGGTGCTTTGTTT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAGGTCAAGGGCCCCATaGCTGAATCCCTTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKRSRAP*LNPFLL
Trigger: CAGAAGAAAGGGATTCAGGCATGGGGCCCTTGACCT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCAGGTCTTGTTGGGTaGACCGTGAGCAAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAGLVG*TVSKFS
Trigger: TGAGAACTTGCTCACGGTGCACCCAACAAGACCTGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTTCCTCACTCAGTGTaGGCACCCCCATCCCCTACC +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILPHSV*APPSPT
Trigger: GGTAGGGGATGGGGGTGCCCACACTGAGTGAGGAAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTGGGATAGAGACCTCTaGGGTCTCTTTCAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFWDRDL*GLFQSC
Trigger: GCAGGACTGAAAGAGACCTCAGAGGTCTCTATCCCA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTCTTCGGGCATTATATaGACCTCAATAATGACCTCA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPSSGII*TSIMTS
Trigger: TGAGGTCATTATTGAGGTTCATATAATGCCCGAAGA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCAGAGAGCTCTGCTTTaGGATTCTCAAAGACTAAAT +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPQRALL*DSQRLN
Trigger: ATTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTACTAGGTTTGGACACTaGGGAGATTTTGTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVTRFGH*GDFVFL
Trigger: AAGAAAAACAAAATCTCCGCAGTGTCCAAACCTAGT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTACTAGGTTTGGACACTaGGGAGATTTTGTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLTRFGH*GDFVFL
Trigger: AAGAAAAACAAAATCTCCGCAGTGTCCAAACCTAGT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTTCCAGCTGTGGGATaGCTTGGACAGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILPAVG*LGQGAS
Trigger: AGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAATTCCCCACTTTTCCTaGATGCCTGAGCAACTCCCA +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKIPHFS*MPEQLP
Trigger: TGGGAGTTGCTCAGGCATCCAGGAAAAGTGGGGAAT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTGGCGCACTAGTGACTaGACTGGCTCAGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIWRTSD*TGSVQT
Trigger: TGTCTGCACTGAGCCAGTTCAGTCACTAGTGCGCCA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTTTTCCTGGATGCCTaGGCAACTCCCAGCCATCCT +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILFLDA*ATPSHP
Trigger: AGGATGGCTGGGAGTTGCTCAGGCATCCAGGAAAAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCTGGGGTGGCAAGATaGCAGCAATCAAAACTGGGC +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPGVAR*QQSKLG
Trigger: GCCCAGTTTTGATTGCTGGCATCTTGCCACCCCAGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAATGAAAGATGGTCTTTaGTGGCACCTGGGAACTGCT +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKMKDGL*WHLGTA
Trigger: AGCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCAT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTATAAAAGTAGTAACATaGCTTGCTGAGGAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLIKVVT*LAEESN
Trigger: ATTGCTTTCCTCAGCAAGGCATGTTACTACTTTTAT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAGCTGTGGGATGGCTTaGACAGGGGGCATCTTTGAG +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISCGMA*TGGIFE
Trigger: CTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAAGGCCTGGGACTCCCTaGTCCATTCCCTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGRPGTP*SIPFLT
Trigger: AGTGAGGAAGGGAATGGACCAGGGAGTCCCAGGCCT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAATTATTTAGCAATGTaGACAGTTCTCTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPNYLAM*TVLFPE
Trigger: CTCTGGGAAGAGAACTGTCCACATTGCTAAATAATT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp CTACTGTATGACCCATTGTGGTCACTGCTCTTTGAGCCATACAACTaGAGAGACTGGCTTTGGATTGGACAGTCAAAGGGAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: LLYDPLWSLLFEPYN*RDWLWIGQSKGSGQ
Trigger: TTGCCCACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGTCATACAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp ACTCTGGTTCTAATTTGTGGAGGTGGGTCCCTACTGTATGACCCATaGTGGTCACTGCTCTTTGAGCCATACAACTTGAGAGACTGGCTT +
Preference number: 2 (lower is better)
Translates to: TLVLICGGGSLLYDP*WSLLFEPYNLRDWL
Trigger: AAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGTCATACAGTAGGGACCCACCTCCACAAATTAGAACCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGTGGTCCAGTCCAACTaGGATGCTCTGTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGVVQSN*DALCLA
Trigger: TGCCAAGCACAGAGCATCTCAGTTGGACTGGACCAC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTATGAAAGATGGTCTTTaGTGGCACCTGGGAACTGCT +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFMKDGL*WHLGTA
Trigger: AGCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCAT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTACTGAACTGGCTCAGTaGAGACATCTGAGGAGCGAG +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEITELAQ*RHLRSE
Trigger: CTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGTCTCTTTCAGTCCTaGATTTTAATGACTCTATTA +
Preference number: 2 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGLFQS*ILMTLL
Trigger: TAATAGAGTCATTAAAATGCAGGACTGAAAGAGACC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAACAGTGACAATGGCCTaGCCCAGAAGCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGTVTMA*PRSRLE
Trigger: CTCAAGCCTGCTTCTGGGCCAGGCCATTGTCACTGT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTACTCCCAGCCATCCTTaGGGCTGGATGTCACAATGT +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEITPSHP*GWMSQC
Trigger: ACATTGTGACATCCAGCCCCAAGGATGGCTGGGAGT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp CTACCCCAAACATGCACATGCTCTTCTCACCAACGTGCCTCTCACTaGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATAATTCT +
Preference number: 2 (lower is better)
Translates to: LPQTCTCSSHQRASH*PLTCSSHPFVLNNS
Trigger: AGAATTATTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGAGCATGTGCATGTTTGGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGTGAAGTCCCTATGGTaGACAGGATATCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFVKSLW*TGYLSF
Trigger: AAAGCTGAGATATCCTGTGCACCATAGGGACTTCAC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGAGAAGGACTGGCATaGACCCTTCTTGCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGEGLA*TLLASS
Trigger: ACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAGCCATCCTTGGGGCTaGATGTCACAATGTAAACAT +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSHPWG*MSQCKH
Trigger: ATGTTTACATTGTGACATCCAGCCCCAAGGATGGCT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCAGTCCAACTGAGATaGTCTGTGCTTGGCAGACAT +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPVQLR*SVLGRH
Trigger: ATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATGTTTCTATTCCCAGTaGCATCTCTTTTGCACATCT +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKCFYSQ*HLFCTS
Trigger: AGATGTGCAAAAGAGATGCCACTGGGAATAGAAACA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp TGTGGCCAAATTTGGAGGATTTTCCAACCTGCTATGGCTGGACCCTaGGGTGTTAAATCACTAAATTCCCTTTCTACCTGCTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: CGQIWRIFQPAMAGP*GVKSLNSLSTCSLL
Trigger: AAGAAGAGAGCAGGTAGAAAGGGAATTTAGTGATTTAACACCCAAGGGTCCAGCCATAGCAGGTTGGAAAATCCTCCAAATTTGGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACATGTAATCCATTGGTaGAGTCCCTATGGTGCACAG +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGHVIHW*SPYGAQ
Trigger: CTGTGCACCATAGGGACTTCACCAATGGATTACATG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp TCTCTAACCCCATGTTATTTAGTTCAAGTGGGAAGTTACCAACACTaGCATACACAGACACACACACACACACACACACACACACACTCT +
Preference number: 2 (lower is better)
Translates to: SLTPCYLVQVGSYQH*HTQTHTHTHTHTHS
Trigger: AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATGCAAGTGTTGGTAACTTCCCACTTGAACTAAATAACATGGGGTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGTGAAGTCCCTATGGTaGACAGGATATCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGVKSLW*TGYLSF
Trigger: AAAGCTGAGATATCCTGTGCACCATAGGGACTTCAC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAACCCAAAATAGTCTGTaGAGATTAGGAAGAGACCGG +
Preference number: 2 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGTQNSL*RLGRDR
Trigger: CCGGTCTCTTCCTAATCTGCACAGACTATTTTGGGT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAATAAAAGTAGTAACATaGCTTGCTGAGGAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKIKVVT*LAEESN
Trigger: ATTGCTTTCCTCAGCAAGGCATGTTACTACTTTTAT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGGTCTCTTTCAGTCCTaGATTTTAATGACTCTATTA +
Preference number: 2 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFGLFQS*ILMTLL
Trigger: TAATAGAGTCATTAAAATGCAGGACTGAAAGAGACC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 90 bp AATTATTTAGCAATGTGGACAGTTCTCTTCCCAGAGAGCTCTGCTTaGAGATTCTCAAAGACTAAATATCTAGATGGATATACGCCAAGG +
Preference number: 2 (lower is better)
Translates to: NYLAMWTVLFPESSA*RFSKTKYLDGYTPR
Trigger: CCTTGGCGTATATCCATCTAGATATTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTGGGAAGAGAACTGTCCACATTGCTAAATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp CCCTGGCTAGGGCTAGGAGGCCAGGCGCACAAGGCCTaGTACCCCCTGGCCATGTCGGAGAAGGACTGGCAT +
Preference number: 3 (lower is better)
Translates to: PWLGLGGQAHKA*YPLAMSEKDWH
Trigger: ATGCCAGTCCTTCTCCGACATGGCCAGGGGGTACCAGGCCTTGTGCGCCTGGCCTCCTAGCCCTAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp GGCCTGGCTGGCGCACTAGTGACTGAACTGGCTCAGTaGAGACATCTGAGGAGCGAGGCTGCAGGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: GLAGALVTELAQ*RHLRSEAAGPS
Trigger: GGAGGGCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGTCACTAGTGCGCCAGCCAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCCCGCTCCCTGCCTCTaGCTCTCTGAGCGCCACTGG +
Preference number: 3 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVPAPCL*LSERHW
Trigger: CCAGTGGCGCTCAGAGAGCAAGAGGCAGGGAGCGGG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp TGCACTCCCTCCTGGCCTGGCTGGCGCACTAGTGACTaGACTGGCTCAGTGCAGACATCTGAGGAGCGAGGC +
Preference number: 3 (lower is better)
Translates to: CTPSWPGWRTSD*TGSVQTSEERG
Trigger: GCCTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGTCACTAGTGCGCCAGCCAGGCCAGGAGGGAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp GGTCAGAGCCCTAGGCCCCCTCCCTCCTCTGCCTGCTaGCGGCAGTATCCTTCAGCATCACAAAGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: GQSPRPPPSSAC*RQYPSASQSSS
Trigger: TGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGAGGAGGGAGGGGGCCTAGGGCTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCAGGCTTGTGGGAATaGGTGTCTCACCAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRAGLWE*VSHQGV
Trigger: CACACCCTGGTGAGACACCAATTCCCACAAGCCTGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGAAGCTGTGAGTCCCTaGGGACCTGCCCATTGCCAA +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCREAVSP*GPAHCQ
Trigger: TTGGCAATGGGCAGGTCCCAAGGGACTCACAGCTTC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTTCCCAGGAAGTGTTaGGTCTGGCCCTGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLPRKC*VWPCSW
Trigger: CCAACTGCAGGGCCAGACCAAACACTTCCTGGGAAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGCCCAGAAGCAGGCTaGAGCTCAGAAGACACCCCC +
Preference number: 3 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGPEAG*SSEDTP
Trigger: GGGGGTGTCTTCTGAGCTCAAGCCTGCTTCTGGGCC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTACCTGCTGCTCAGGGTaGCCCCTTTCCAGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLTCCSG*PLSSSL
Trigger: GAGAGAGCTGGAAAGGGGCAACCCTGAGCAGCAGGT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATaGTCTGTGCTTGGCAGACATGCTCTGCACTCCCTC +
Preference number: 3 (lower is better)
Translates to: GSREHCGPVQLR*SVLGRHALHSL
Trigger: GAGGGAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp TTTGGGGCCAGGCTTAGGGTAGACGGGGCTGAGGCCTaGCAAGACAGCCCGTCTACAGTCATTGGACATAGG +
Preference number: 3 (lower is better)
Translates to: FGARLRVDGAEA*QDSPSTVIGHR
Trigger: CCTATGTCCAATGACTGTAGACGGGCTGTCTTGCCAGGCCTCAGCCCCGTCTACCCTAAGCCTGGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp CCGACTCTTCCCGGAGCAGAATTTGTATGGACTCTCTaGGTGTGGAGCCCAGGCAGGGCTCACTTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: PTLPGAEFVWTL*VWSPGRAHFSG
Trigger: GCCTGAGAAGTGAGCCCTGCCTGGGCTCCACACCCAGAGAGTCCATACAAATTCTGCTCCGGGAAGAGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTGGTATTCCCTCCATaGTCCCCAATGAGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLVFPP*SPMSPG
Trigger: GCCAGGGCTCATTGGGGACAATGGAGGGAATACCAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCTGGGATCAAGACCTaGGAAGGTAGGGCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAGIKT*EGRALH
Trigger: GTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCAACGTGCCTCTCACTaGCCTCTAACGTGCTCGAGC +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLQRASH*PLTCSS
Trigger: GCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTAACTCCCAGCCATCCTaGGGGCTGGATGTCACAATG +
Preference number: 3 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVNSQPS*GLDVTM
Trigger: CATTGTGACATCCAGCCCCAAGGATGGCTGGGAGTT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCAGGCTTGTGGGAATaGGTGTCTCACCAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAGLWE*VSHQGV
Trigger: CACACCCTGGTGAGACACCAATTCCCACAAGCCTGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGGTCTGGCCCTGCAGTaGGGACTAAACTTATATGCA +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRGLALQ*GLNLYA
Trigger: TGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGATTGGGGAAGGGGGATaGCATGCTAATCCCAACCTT +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRIGEGG*HANPNL
Trigger: AAGGTTGGGATTAGCATGCAATCCCCCTTCCCCAAT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAGACGACAAAGGAGGTaGCCTTCCTCCCAGATGTGC +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLRRQRR*PSSQMC
Trigger: GCACATCTGGGAGGAAGGCAACCTCCTTTGTCGTCT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp AGGCAGGCTCTCGGGAGCACTGTGGTCCAGTCCAACTaGGATGCTCTGTGCTTGGCAGACATGCTCTGCACT +
Preference number: 3 (lower is better)
Translates to: RQALGSTVVQSN*DALCLADMLCT
Trigger: AGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp CTACAGTCATTGGACATAGGGGAAACCCACAGGGCATaGGGCACACCTGCTGCTCAGGGTTGCCCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: LQSLDIGETHRA*GTPAAQGCPFP
Trigger: TGGAAAGGGGCAACCCTGAGCAGCAGGTGTGCCCCATGCCCTGTGGGTTTCCCCTATGTCCAATGACTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGATATCTCAGCTTTCTaGGCTCTGGGTCCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVDISAF*ALGPRP
Trigger: AGGCCTGGGACCCAGAGCCAAGAAAGCTGAGATATC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCAGATTGGTACCTGTaGTGGGAAGTTTTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPDWYL*WEVLSA
Trigger: TGCAGACAAAACTTCCCACAACAGGTACCAATCTGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp GCCATGCAGTCCACATGCTCACGCTTCAGGGATTACTaGAGTCTGCCTTGCCCGGGAGTCACTTCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: AMQSTCSRFRDY*SLPCPGVTSCR
Trigger: TCTGCAGGAAGTGACTCCCGGGCAAGGCAGACTTCAGTAATCCCTGAAGCGTGAGCATGTGGACTGCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp AACAGAAATCAAAACAAGGAACAGCTCCCGAGGGCCTaGCTCTGCTCCAGGGACTGGGGCCTAGAGGTCAAG +
Preference number: 3 (lower is better)
Translates to: NRNQNKEQLPRA*LCSRDWGLEVK
Trigger: CTTGACCTCTAGGCCCCAGTCCCTGGAGCAGAGGCAGGCCCTCGGGAGCTGTTCCTTGTTTTGATTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp AGCTCAGAAGACACCCCCAAGCCTGAAAGCCAGTGGTaGCTTCTAATGTACCCACCTGTGGTAGGCGTGGCA +
Preference number: 3 (lower is better)
Translates to: SSEDTPKPESQW*LLMYPPVVGVA
Trigger: TGCCACGCCTACCACAGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCTTCTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATATGAAAGATGGTCTTaGCTGGCACCTGGGAACTGC +
Preference number: 3 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRYERWS*LAPGNC
Trigger: GCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCATA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGATATTCTCTTTGGGTTaGCAGGGTTTGTGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRIFSLG*QGLCCE
Trigger: CTCACAGCACAAACCCTGCAAACCCAAAGAGAATAT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp CAGCCCAAATATCAGGACACTGGGGTGAGAGAGGGCTaGTGGGAGTCATTTTTAGGCCAGGTCTCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: QPKYQDTGVREG*WESFLGQVSLS
Trigger: GCTCAGAGAGACCTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp CTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTaGGCGGCTCAAGGTTCTCACATCCCCCAAAAAGAT +
Preference number: 3 (lower is better)
Translates to: LQACGNWCLTRV*AAQGSHIPQKD
Trigger: ATCTTTTTGGGGGATGTGAGAACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp GCTACCCCAAACATGCACATGCTCTTCTCACCAACGTaGCTCTCACTTGCCTCTAACGTGCTCGAGCCATCC +
Preference number: 3 (lower is better)
Translates to: ATPNMHMLFSPT*LSLASNVLEPS
Trigger: GGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGAGCATGTGCATGTTTGGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp AGGGACAGTAGGCCCCAGCTACCCCAAACATGCACATaGTCTTCTCACCAACGTGCCTCTCACTTGCCTCTA +
Preference number: 3 (lower is better)
Translates to: RDSRPQLPQTCT*SSHQRASHLPL
Trigger: TAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGAGCATGTGCATGTTTGGGGTAGCTGGGGCCTACTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp TTGAGCTCAGAAGACACCCCCAAGCCTGAAAGCCAGTaGTGGCTTCTAATGTACCCACCTGTGGTAGGCGTG +
Preference number: 3 (lower is better)
Translates to: LSSEDTPKPESQ*WLLMYPPVVGV
Trigger: CACGCCTACCACAGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCTTCTGAGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp GTCAAGGGCCCCATGCCTGAATCCCTTTCTTCTGGGTaGATCTGGCAGGGACCCCTATCATCTTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: VKGPMPESLSSG*IWQGPLSSSQR
Trigger: TCTTTGGGAAGATGATAGGGGTCCCTGCCAGATCCACCCAGAAGAAAGGGATTCAGGCATGGGGCCCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp CCCAAATATCAGGACACTGGGGTGAGAGAGGGCTGCTaGGAGTCATTTTTAGGCCAGGTCTCTCTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: PKYQDTGVREGC*ESFLGQVSLSS
Trigger: GCTGCTCAGAGAGACCTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTATGGCATGTAATCCATaGGTGAAGTCCCTATGGTGC +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLMACNP*VKSLWC
Trigger: GCACCATAGGGACTTCACCAATGGATTACATGCCAT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCATGGGAAACTAGGTTaGGACACTGCGGAGATTTTG +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLHGKLG*DTAEIL
Trigger: CAAAATCTCCGCAGTGTCCAAACCTAGTTTCCCATG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCAGATTGGTACCTGTaGTGGGAAGTTTTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPDWYL*WEVLSA
Trigger: TGCAGACAAAACTTCCCACAACAGGTACCAATCTGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCTACTGTATGACCCATaGTGGTCACTGCTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLLLYDP*WSLLFE
Trigger: CTCAAAGAGCAGTGACCACAATGGGTCATACAGTAG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAACTCTGGTTCTAATTaGTGGAGGTGGGTCCCTACT +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLNSGSN*WRWVPT
Trigger: AGTAGGGACCCACCTCCACAAATTAGAACCAGAGTT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp AGAAGCAGGCTTGAGCTCAGAAGACACCCCCAAGCCTaGAAGCCAGTGGTGGCTTCTAATGTACCCACCTGT +
Preference number: 3 (lower is better)
Translates to: RSRLELRRHPQA*KPVVASNVPTC
Trigger: ACAGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCTTCTGAGCTCAAGCCTGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp TTCATTATAAGGGGCTTCTCATACCCATGGCATGGCTaGGGGGTGGGAGTCAGCCTGCTCGATGACACGTCT +
Preference number: 3 (lower is better)
Translates to: FIIRGFSYPWHG*GVGVSLLDDTS
Trigger: AGACGTGTCATCGAGCAGGCTGACTCCCACCCCTCAGCCATGCCATGGGTATGAGAAGCCCCTTATAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp AGGTGCGAAGACTGGGGCATGGCAATCCCTGTTCACTaGCCAAATCTACATGCTGTCACCAGATGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: RCEDWGMAIPVH*PNLHAVTRWQH
Trigger: ATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACAGGGATTGCCATGCCCCAGTCTTCGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp AATCCCAACCTTATAGGCAGGCTGGGATCAAGACCTTaGAAGGTAGGGCTCTCCACCCAGTCTGTAAGCACC +
Preference number: 3 (lower is better)
Translates to: NPNLIGRLGSRP*KVGLSTQSVST
Trigger: GGTGCTTACAGACTGGGTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAGCCTGCCTATAAGGTTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp GGACTAAACTTATATGCACCTGCAGGTCTTGTTGGGTaGACCGTGAGCAAGTTCTCACCCCAACCACCTGAC +
Preference number: 3 (lower is better)
Translates to: GLNLYAPAGLVG*TVSKFSPQPPD
Trigger: GTCAGGTGGTTGGGGTGAGAACTTGCTCACGGTGCACCCAACAAGACCTGCAGGTGCATATAAGTTTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp TCTGGCCCTGCAGTTGGGACTAAACTTATATGCACCTaGAGGTCTTGTTGGGTGCACCGTGAGCAAGTTCTC +
Preference number: 3 (lower is better)
Translates to: SGPAVGTKLICT*RSCWVHREQVL
Trigger: GAGAACTTGCTCACGGTGCACCCAACAAGACCTGCAGGTGCATATAAGTTTAGTCCCAACTGCAGGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp GTTGGGACTAAACTTATATGCACCTGCAGGTCTTGTTaGGTGCACCGTGAGCAAGTTCTCACCCCAACCACC +
Preference number: 3 (lower is better)
Translates to: VGTKLICTCRSC*VHREQVLTPTT
Trigger: GGTGGTTGGGGTGAGAACTTGCTCACGGTGCACCCAACAAGACCTGCAGGTGCATATAAGTTTAGTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTGGCATGCACCCTTCTaGCTTCAAGTATTAATATTC +
Preference number: 3 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLWHAPF*LQVLIF
Trigger: GAATATTAATACTTGAAGCAAGAAGGGTGCATGCCA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTCCATCTTGGTAATATaGCACTTTTCCTGTCTCTCA +
Preference number: 3 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSILVI*HFSCLS
Trigger: TGAGAGACAGGAAAAGTGCAATATTACCAAGATGGA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATTTCTCTTTCACCTCTaGAGGCGCAGCCTATTGGCC +
Preference number: 3 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKFLFHL*RRSLLA
Trigger: GGCCAATAGGCTGCGCCTCAAGAGGTGAAAGAGAAA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp AAGGCCTGGTACCCCCTGGCCATGTCGGAGAAGGACTaGCATGCACCCTTCTTGCTTCAAGTATTAATATTC +
Preference number: 3 (lower is better)
Translates to: KAWYPLAMSEKD*HAPFLLQVLIF
Trigger: GAATATTAATACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCCGACATGGCCAGGGGGTACCAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp TACACCAGAAGGATCACAGCCCAAATATCAGGACACTaGGGTGAGAGAGGGCTGCTGGGAGTCATTTTTAGG +
Preference number: 3 (lower is better)
Translates to: YTRRITAQISGH*GERGLLGVIFR
Trigger: CCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTGGGCTGTGATCCTTCTGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp GACAAAGGAGGTTGCCTTCCTCCCAGATGTGCCCAATaGAGTCTGAACTCTGGTTCTAATTTGTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: DKGGCLPPRCAQ*SLNSGSNLWRW
Trigger: CCACCTCCACAAATTAGAACCAGAGTTCAGACTCCATTGGGCACATCTGGGAGGAAGGCAACCTCCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp TCTGAGCGCCACTGGTATTCCCTCCATTGTCCCCAATaGGCCCTGGCATCCATCTTGGTAATATTGCACTTT +
Preference number: 3 (lower is better)
Translates to: SERHWYSLHCPQ*ALASILVILHF
Trigger: AAAGTGCAATATTACCAAGATGGATGCCAGGGCTCATTGGGGACAATGGAGGGAATACCAGTGGCGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp GGATTGGACAGTCAAAGGGAAGTGGGCAAAACCAGCTaGGAACCCGGGAGCTGGATGCATATATTCTGGAAT +
Preference number: 3 (lower is better)
Translates to: GLDSQREVGKTS*EPGSWMHIFWN
Trigger: ATTCCAGAATATATGCATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCACTTCCCTTTGACTGTCCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp AAGTGGGCAAAACCAGCTGAGAACCCGGGAGCTGGATaGATATATTCTGGAATCAGGGCCTGCAAACTCAAA +
Preference number: 3 (lower is better)
Translates to: KWAKPAENPGAG*IYSGIRACKLK
Trigger: TTTGAGTTTGCAGGCCCTGATTCCAGAATATATGCATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAATGGCATGTAATCCATaGGTGAAGTCCCTATGGTGC +
Preference number: 3 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKMACNP*VKSLWC
Trigger: GCACCATAGGGACTTCACCAATGGATTACATGCCAT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAACTCCCAGCCATCCTaGGGGCTGGATGTCACAATG +
Preference number: 3 (lower is better)
Translates to: FTFSVATHGKLGLDTAEINSQPS*GLDVTM
Trigger: CATTGTGACATCCAGCCCCAAGGATGGCTGGGAGTT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTCCTGTCTCTCAGATaGTTTCCATTTTTGATTGAG +
Preference number: 3 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPFLSLR*FPFLIE
Trigger: CTCAATCAAAAATGGAAACAATCTGAGAGACAGGAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCCCTGGCATCCATCTaGGTAATATTGCACTTTTCC +
Preference number: 3 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKALASI*VILHFS
Trigger: GGAAAAGTGCAATATTACCAAGATGGATGCCAGGGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp CTGGTACCCCCTGGCCATGTCGGAGAAGGACTGGCATaGACCCTTCTTGCTTCAAGTATTAATATTCTCTTT +
Preference number: 3 (lower is better)
Translates to: LVPPGHVGEGLA*TLLASSINILF
Trigger: AAAGAGAATATTAATACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCCGACATGGCCAGGGGGTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp CTGCTCTTTGAGCCATACAACTTGAGAGACTGGCTTTaGATTGGACAGTCAAAGGGAAGTGGGCAAAACCAG +
Preference number: 3 (lower is better)
Translates to: LLFEPYNLRDWL*IGQSKGSGQNQ
Trigger: CTGGTTTTGCCCACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp ATTTGTGGAGGTGGGTCCCTACTGTATGACCCATTGTaGTCACTGCTCTTTGAGCCATACAACTTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: ICGGGSLLYDPL*SLLFEPYNLRD
Trigger: GTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGTCATACAGTAGGGACCCACCTCCACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp ACCCATTGTGGTCACTGCTCTTTGAGCCATACAACTTaGGAGACTGGCTTTGGATTGGACAGTCAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: THCGHCSLSHTT*ETGFGLDSQRE
Trigger: TTCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp CATCTCTTTTGCACATCTTCATTTTGGAGCCTGGGATaGCTGCCTAGGCCACTTATGCTAGACCTGTTAATG +
Preference number: 3 (lower is better)
Translates to: HLFCTSSFWSLG*LPRPLMLDLLM
Trigger: CATTAACAGGTCTAGCATAAGTGGCCTAGGCAGTCATCCCAGGCTCCAAAATGAAGATGTGCAAAAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp TCTTCTCACCAACGTGCCTCTCACTTGCCTCTAACGTaGTCGAGCCATCCTTTTGTTCTAAATAATTCTTCC +
Preference number: 3 (lower is better)
Translates to: SSHQRASHLPLT*SSHPFVLNNSS
Trigger: GGAAGAATTATTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR TCA 72 bp AACAAAGCACCAAATGCTGCATCTTCGGGCATTATATaGACCTCAATAATGACCTCAGAAGGGCTCATTATG +
Preference number: 3 (lower is better)
Translates to: NKAPNAASSGII*TSIMTSEGLIM
Trigger: CATAATGAGCCCTTCTGAGGTCATTATTGAGGTTCATATAATGCCCGAAGATGCAGCATTTGGTGCTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CCA 72 bp ATATATTCTGGAATCAGGGCCTGCAAACTCAAAGATTaGTTTGTGGCTGGTGACTTCTCTCTGCTAAGTAAA +
Preference number: 3 (lower is better)
Translates to: IYSGIRACKLKD*FVAGDFSLLSK
Trigger: TTTACTTAGCAGAGAGAAGTCACCAGCCACAAACCAATCTTTGAGTTTGCAGGCCCTGATTCCAGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR GCA 72 bp GTCTTGAAACGGAAAGGAAAACAAAGCACCAAATGCTaGATCTTCGGGCATTATATGAACCTCAATAATGAC +
Preference number: 3 (lower is better)
Translates to: VLKRKGKQSTKC*IFGHYMNLNND
Trigger: GTCATTATTGAGGTTCATATAATGCCCGAAGATGCAGCATTTGGTGCTTTGTTTTCCTTTCCGTTTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCCCCACAAAGCGAGTaGCGCCCCCGGCGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPPQSE*RPRRRH
Trigger: GTGACGCCGCCGGGGGCGCCACTCGCTTTGTGGGGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCCGGACCGATGGCTTaGCCCGGGGACAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRAGPMA*PGDRRS
Trigger: TGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTTGGGCCGGACCGATaGCTTGGCCCGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLGPDR*LGPGTG
Trigger: TCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTAGGCCGCCTCTCCCCTaGGGCTCTGTCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVRPPLP*GSVLHG
Trigger: CCCGTGGAGGACAGAGCCTCAGGGGAGAGGCGGCCT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGGGACCCTGGCAGCTaGATCGGTGGCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRRDPGS*IGGCEA
Trigger: GGCCTCACAGCCACCGATTCAGCTGCCAGGGTCCCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCCTCCTTGGGCTTGCTaGGGGGTGCTGGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVPPWAC*GVLAGA
Trigger: TGCCCCCGCCAGCACCCCCCAGCAAGCCCAAGGAGG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGCCCTCCACGGAGCTaGCCTGTGGGTCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSPPRS*PVGLSW
Trigger: CCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTCAGTGCAGACATCTaGGGAGCGAGGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLSADI*GARLQG
Trigger: GCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATGGGCCGGGTCAGCGTaGTTGTGCGGCGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRWAGSA*LCGGSG
Trigger: ACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAGTGCCGCGGATGCCTaGGTCCGAAGCAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSAADA*VRSRAG
Trigger: CCCCGCTCTGCTTCGGACGCAGGCATCCGCGGCACT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTGCTTCTCCAGCACCTaGACCTCCACGCCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVCFSST*TSTPAG
Trigger: CCCCGCGGGCGTGGAGGTGCAGGTGCTGGAGAAGCA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCACCACCCGCTCTCCTaGTTCTCCAGCACCTGCACC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRHHPLS*FSSTCT
Trigger: GGTGCAGGTGCTGGAGAAGCAGGAGAGCGGGTGGTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACAGCTCCCGAGGGCCTaGCTCTGCTCCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRQLPRA*LCSRDW
Trigger: CCAGTCCCTGGAGCAGAGGCAGGCCCTCGGGAGCTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCCCTCGCCTTCGGCTaGTGGAGTTTCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRALAFG*WSFLVP
Trigger: GGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCTGGCGGGGGCACCTTaGGCCGGGTCAGCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLAGAP*AGSACL
Trigger: CAAGCACGCTGACCCGGCCCAAGGTGCCCCCGCCAG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCTCCTTGGGCTTGCTaGGGGGTGCTGGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPPWAC*GVLAGA
Trigger: TGCCCCCGCCAGCACCCCCCAGCAAGCCCAAGGAGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGACACAAACACCGACTaGGGCCTGACCGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRDTNTD*GLTATC
Trigger: GCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCCCCACAAAGCGAGTaGCGCCCCCGGCGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPPQSE*RPRRRH
Trigger: GTGACGCCGCCGGGGGCGCCACTCGCTTTGTGGGGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAGGCCGCCTCTCCCCTaGGGCTCTGTCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIRPPLP*GSVLHG
Trigger: CCCGTGGAGGACAGAGCCTCAGGGGAGAGGCGGCCT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACACTCTTGGAGCCCTTaGGCCCTCCACGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRHSWSP*ALHGAG
Trigger: GCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGTGGGCAAAACCAGCTaGGAACCCGGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRVGKTS*EPGSWM
Trigger: CATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCAC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCTGCTCCTCAGAAGTaGTCACGAACCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPAPQK*SRTTSR
Trigger: GCGGCTGGTGGTTCGTGAGCACTTCTGAGGAGCAGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGGACAGCGAGGAGCTaGCTGGGGAGTCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGTARS*LGSRCP
Trigger: GGGACAGCGACTCCCCAGGCAGCTCCTCGCTGTCCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGCCTGACCGCCACCTaGCGCACTCCGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGLTAT*RTPFLI
Trigger: GATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCCTCCTCTGCCTGCTaGCGGCAGTATCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPSSAC*RQYPSA
Trigger: TGCTGAAGGATACTGCCGGCAGCAGGCAGAGGAGGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGTCCCCACCCAGCCATaGAGTCCACATGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRVPTQP*SPHAHA
Trigger: AGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGAC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGCAATGGGGGCCTCATaGCCCTCGCCTTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVAMGAS*PSPSAG
Trigger: ACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTTCCGCGGGGAGTCCTaGCTCTCACTGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLFRGES*LSLAPV
Trigger: TACGGGGGCCAGTGAGAGCCAGGACTCCCCGCGGAA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCTTGGGCCGGACCGATaGCTTGGCCCGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLGPDR*LGPGTG
Trigger: TCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAGTCTGAACCCTGGCTaGCAGCCCGTTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSLNPG*QPVRPG
Trigger: GCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGGTGAGTCTGAACCCTaGCTGGCAGCCCGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLGESEP*LAARSA
Trigger: GGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCAGCTTTCTTGGCTCTaGGTCCCAGGCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRQLSWL*VPGLGL
Trigger: GAGTCCCAGGCCTGGGACCCAGAGCCAAGAAAGCTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTGGGGTCTCCCACATaGCCTGTCCCAGATGGCATG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLGSPT*PVPDGM
Trigger: CATGCCATCTGGGACAGGCCATGTGGGAGACCCCAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCAGGCGCACAAGGCCTaGTACCCCCTGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLQAHKA*YPLAMS
Trigger: CGACATGGCCAGGGGGTACCAGGCCTTGTGCGCCTG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAAGGCCCTCTCGCCCTaGCTAGGGCTAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRKALSP*LGLGGQ
Trigger: CTGGCCTCCTAGCCCTAGCCAGGGCGAGAGGGCCTT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCCTATTGGCCAGGATaGAACTGGGAGCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRAYWPG*NWEQGG
Trigger: CCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAAGACTCACCCACCTTaGAGCGGGCCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRKTHPP*SGPAAE
Trigger: CTCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGACACCCCCAAGCCTaGAAGCCAGTGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRRHPQA*KPVVAS
Trigger: AGAAGCCACCACTGGCTTTCAGGCTTGGGGGTGTCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAGGGACCCTGGCAGCTaGATCGGTGGCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPRDPGS*IGGCEA
Trigger: GGCCTCACAGCCACCGATTCAGCTGCCAGGGTCCCT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTCAGTGCAGACATCTaGGGAGCGAGGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLSADI*GARLQG
Trigger: GCCCTGCAGCCTCGCTCCTCAGATGTCTGCACTGAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCAGGCTGGATTCTCTaGGTGGTGGAGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPGWIL*VVEVLS
Trigger: GGACAAGACCTCCACCACGCAGAGAATCCAGCCTGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGGTCAGCGTGCTTGTaGGGCGGCTCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGSACL*GGSGWA
Trigger: AGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTGAAGCGGGCCCGCTaGAGAGAAGAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLKRAR*REEAGE
Trigger: CTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTTCAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAGTGCCGCGGATGCCTaGGTCCGAAGCAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPISAADA*VRSRAG
Trigger: CCCCGCTCTGCTTCGGACGCAGGCATCCGCGGCACT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTGGGAGTGCCGCGGATaGCTGCGTCCGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPWECRG*LRPKQS
Trigger: GCTCTGCTTCGGACGCAGGCATCCGCGGCACTCCCA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCACCACCCGCTCTCCTaGTTCTCCAGCACCTGCACC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLHHPLS*FSSTCT
Trigger: GGTGCAGGTGCTGGAGAAGCAGGAGAGCGGGTGGTG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGAGTGCCTGAGGTCTTaGCGAAGCCCCCGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVECLRS*RSPREV
Trigger: AACCTCCCGGGGGCTTCGGCAAGACCTCAGGCACTC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAACACGGGTATGCTGTTaGGCTGGGCGGGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRTRVCC*AGRAVG
Trigger: CCCTACTGCCCGCCCAGCGCAACAGCATACCCGTGT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCAGGGGACACGGGTATaGTGTTGCGCTGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPQGTRV*CCAGRA
Trigger: TGCCCGCCCAGCGCAACAGCATACCCGTGTCCCCTG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGTGAGGGGGCGAGGTaGGAAGACTGGGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGEGAR*EDWGMA
Trigger: TGCCATGCCCCAGTCTTCGCACCTCGCCCCCTCACC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTCATGGGCTCGGCGGTaGCGTCGGCACCTGTCACGT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPSWARR*RRHLSR
Trigger: ACGTGACAGGTGCCGACGCCACCGCCGAGCCCATGA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTCATGGGCTCGGCGGTaGCGTCGGCACCTGTCACGT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSWARR*RRHLSR
Trigger: ACGTGACAGGTGCCGACGCCACCGCCGAGCCCATGA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTACTGTTCCAGGATCATaGGCTCGGCGGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVTVPGS*ARRWRR
Trigger: CCGACGCCACCGCCGAGCCCATGATCCTGGAACAGT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACTGGCGGGGGCACCTTaGGCCGGGTCAGCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLAGAP*AGSACL
Trigger: CAAGCACGCTGACCCGGCCCAAGGTGCCCCCGCCAG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTCCGCGGGGAGTCCTaGCTCTCACTGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVFRGES*LSLAPV
Trigger: TACGGGGGCCAGTGAGAGCCAGGACTCCCCGCGGAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGGTTTAGGAATGGCTTaGGCCGGACCGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRGLGMA*AGPMAW
Trigger: CCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCACGGAGCTGGCCTGTaGGTCTCAGCTGGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPHGAGL*VSAGAV
Trigger: TACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGAGGTTTGGAGGGGATaGGGGGCGTGGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGREVWRG*GAWPSC
Trigger: GCAAGAAGGCCACGCCCCCCATCCCCTCCAAACCTC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGTACTGTGTCCTCCATaGGGTGCCCCACGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVVLCPP*GAPRRA
Trigger: CGCTCTCCGTGGGGCACCCCATGGAGGACACAGTAC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCCAGCCCTGCCCAGCTaGGGAACACACGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVPALPS*GTHAEW
Trigger: CCATTCTGCGTGTGTTCCCCAGCTGGGCAGGGCTGG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCCAGTCCAGGGACCCTaGCAGCTGAATCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVPVQGP*QLNRWL
Trigger: CAGCCACCGATTCAGCTGCCAGGGTCCCTGGACTGG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCGAGGTGCGAAGACTaGGGCATGGCAATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRARCED*GMAIPV
Trigger: AACAGGGATTGCCATGCCCCAGTCTTCGCACCTCGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCTGATCTGGGCCCGCTaGGGGGCAATCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILIWAR*GAILAT
Trigger: TGTGGCCAGGATTGCCCCTCAGCGGGCCCAGATCAG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCGCTTATCGATGTATaGTGCGGGGGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPALIDV*CGGPAL
Trigger: GAGGGCTGGGCCCCCGCATCATACATCGATAAGCGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGAGGAGCCTCTGGCTaGCAGGGTGTCCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGGASG*QGVLCI
Trigger: TATGCAGAGGACACCCTGTCAGCCAGAGGCTCCTCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTGAATCGGTGGCTGTaGGGCCCAATCTGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLNRWL*GPICPK
Trigger: TTTCGGACAGATTGGGCCTCACAGCCACCGATTCAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTCCATTGTCCCCAATaGGCCCTGGCATCCATCTTG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLHCPQ*ALASIL
Trigger: CAAGATGGATGCCAGGGCTCATTGGGGACAATGGAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATGGGCCGGGTCAGCGTaGTTGTGCGGCGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQWAGSA*LCGGSG
Trigger: ACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTGAAGCGGGCCCGCTaGAGAGAAGAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILKRAR*REEAGE
Trigger: CTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTTCAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTGCCTTCGTTCTGCCTaGCCTTGGCGGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLCLRSA*PWRALC
Trigger: ACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCAGGCTGTCTGATTTaGCTTCGTTCTGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPGCLI*LRSACP
Trigger: AGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTACACGGGTATGCTGTTaGGCTGGGCGGGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPTRVCC*AGRAVG
Trigger: CCCTACTGCCCGCCCAGCGCAACAGCATACCCGTGT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTCTGAGGAGCGAGGCTaGAGGGCCCTCCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPISEERG*RALPLE
Trigger: TTCCAGGGGGAGGGCCCTGCAGCCTCGCTCCTCAGA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCGCTCCCTGCCTCTTaGTCTCTGAGCGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPLPAS*SLSATG
Trigger: ACCAGTGGCGCTCAGAGAGCAAGAGGCAGGGAGCGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACAGCTCCCGAGGGCCTaGCTCTGCTCCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQQLPRA*LCSRDW
Trigger: CCAGTCCCTGGAGCAGAGGCAGGCCCTCGGGAGCTG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTAGCCCCAGGCCCTGCTaGAGGCTTGTGGGAATTGGT +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSPRPC*RLVGIG
Trigger: ACCAATTCCCACAAGCCTGCAGCAGGGCCTGGGGCT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGTCCCCACCCAGCCATaGAGTCCACATGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVVPTQP*SPHAHA
Trigger: AGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGAC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTGTCACGTCCTTCTTaGGCGACTCAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLSRPS*ATQPSW
Trigger: CCAGCTGGGCTGAGTCGCCCAAGAAGGACGTGACAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCTCCTTCTTGGCAATaGGGGCCTCATGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSPSWQ*GPHGPR
Trigger: GCGAGGGCCATGAGGCCCCCATTGCCAAGAAGGAGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCTGAGGGGCAATCCTaGCCACAGCTGGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAEGQS*PQLESP
Trigger: AGGGCTCTCCAGCTGTGGCCAGGATTGCCCCTCAGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGTTGTTGTCCTTGGGTaGCGGGGACACAAACACCGA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRVVVLG*RGHKHR
Trigger: TCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAAC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGTATGCTGTTGCGCTaGGCGGGCAGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGMLLR*AGSRGE
Trigger: CTCACCCCTACTGCCCGCCCAGCGCAACAGCATACC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCTACCTTCCAGCTGTaGGATGGCTTGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPTFQL*DGLDRG
Trigger: CCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTAGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTCTGGGTCCCAGGCCTaGGACTCCCTGGTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSGSQA*DSLVHS
Trigger: GGAATGGACCAGGGAGTCCCAGGCCTGGGACCCAGA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAAGGCACTGAGACACTaGGTCCCATGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRKALRH*VPCCPA
Trigger: GGCAGGGCAGCATGGGACCCAGTGTCTCAGTGCCTT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTAAGGCACTGAGACACTaGGTCCCATGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVKALRH*VPCCPA
Trigger: GGCAGGGCAGCATGGGACCCAGTGTCTCAGTGCCTT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGAAACCCACAGGGCATaGGGCACACCTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLETHRA*GTPAAQ
Trigger: CTGAGCAGCAGGTGTGCCCCATGCCCTGTGGGTTTC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGACGGGGCTGAGGCCTaGCAAGACAGCCCGTCTACA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPDGAEA*QDSPST
Trigger: TGTAGACGGGCTGTCTTGCCAGGCCTCAGCCCCGTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTGGACTCTCTGGGTGTaGAGCCCAGGCAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVWTLWV*SPGRAH
Trigger: GTGAGCCCTGCCTGGGCTCCACACCCAGAGAGTCCA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATGGCCAGGATGGAACTaGGAGCAAGGCGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRWPGWN*EQGGDL
Trigger: AAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCTCAGCTCAGGCTCTaGGTCAAAGCCGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRAQLRL*VKAECR
Trigger: CCTGCATTCGGCTTTGACTCAGAGCCTGAGCTGAGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCATCCTTCTTTGCCCTaGCCTTGGGAGTGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVHPSLP*PWECRG
Trigger: TCCGCGGCACTCCCAAGGTCAGGGCAAAGAAGGATG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGGTGATGAGGTCGGATaGGCTTCTCCTAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRGDEVG*ASPRPL
Trigger: GAGGGGTCTAGGAGAAGCTCATCCGACCTCATCACC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTTCTCCAGGCTGTCTaGTTTGCCTTCGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLLQAV*FAFVLP
Trigger: AGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGCCATCAGTGGCCGTaGGTGACTCATTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGHQWP*VTHSSA
Trigger: TGCGGAGGAATGAGTCACTCACGGCCACTGATGGCC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGCCATCAGTGGCCGTaGGTGACTCATTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGHQWP*VTHSSA
Trigger: TGCGGAGGAATGAGTCACTCACGGCCACTGATGGCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCCCAGAAGCAGGCTTaGGCTCAGAAGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAQKQA*AQKTPP
Trigger: TGGGGGTGTCTTCTGAGCTCAAGCCTGCTTCTGGGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCTCTTTTGGAGGGTTaGCATCCTCGGGTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPLLEG*HPRVEP
Trigger: AGGCTCGACCCGAGGATGTCAACCCTCCAAAAGAGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCCCTCCTGGAAGCCTaGTGTCTCCTCATCCCCCTC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPLLEA*CLLIPL
Trigger: GAGGGGGATGAGGAGACAGCAGGCTTCCAGGAGGGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCAGCCCCAGGCCCTGCTaGAGGCTTGTGGGAATTGGT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSPRPC*RLVGIG
Trigger: ACCAATTCCCACAAGCCTGCAGCAGGGCCTGGGGCT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCGGGAGTCACTTCCTaGAGACCTCTGAGTACCTGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPGVTS*RPLSTW
Trigger: CCAGGTACTCAGAGGTCTGCAGGAAGTGACTCCCGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTCGCCTTCGGCTGGTaGAGTTTCCTTGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLAFGW*SFLVPR
Trigger: TCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGCCCTCGCCTTCGGCTaGTGGAGTTTCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIALAFG*WSFLVP
Trigger: GGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGTTGGAACCCCAGGCTaGATTCTCTGCGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLVGTPG*ILCVVE
Trigger: CTCCACCACGCAGAGAATCCAGCCTGGGGTTCCAAC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGGCTCTGGTGGCTTTaGCAGTTGGAACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGLWWL*QLEPQA
Trigger: AGCCTGGGGTTCCAACTGCCAAAGCCACCAGAGCCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCCCGGAGGAGCCTCTaGCTGACAGGGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPRRSL*LTGCPL
Trigger: CAGAGGACACCCTGTCAGCCAGAGGCTCCTCCGGGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCTTCAGGTCGCCACTaGTTTTGGACAAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRASGRH*FWTRKR
Trigger: CCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGGTTTAGGAATGGCTTaGGCCGGACCGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLGLGMA*AGPMAW
Trigger: CCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAAGCCCTCCACGGAGCTaGCCTGTGGGTCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSPPRS*PVGLSW
Trigger: CCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCCCATTCCTTCTTGGTaGGACATGGGGGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVPIPSW*DMGEWW
Trigger: CCACCACTCCCCCATGTCCCACCAAGAAGGAATGGG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTACTTCTCGATGGGCTTaGGGCGCACAGGGGACACGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPITSRWA*GAQGTR
Trigger: CCGTGTCCCCTGTGCGCCCCAAGCCCATCGAGAAGT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTACTGAGACTTCTCGATaGGCTTGGGGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPTETSR*AWGAQG
Trigger: CCCCTGTGCGCCCCAAGCCCATCGAGAAGTCTCAGT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTTCCAGCTGTGGGATaGCTTGGACAGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLPAVG*LGQGAS
Trigger: AGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCTACCTTCCAGCTGTaGGATGGCTTGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPTFQL*DGLDRG
Trigger: CCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTAGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCTTCCTCACTCAGTGTaGGCACCCCCATCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLPHSV*APPSPT
Trigger: GGTAGGGGATGGGGGTGCCCACACTGAGTGAGGAAG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAATACCAGGGATACCTaGGGTGGCAAGATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRNTRDT*GGKMPA
Trigger: TGCTGGCATCTTGCCACCCCAGGTATCCCTGGTATT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTGGTTTTCCTCCAGATaGGTCAGAGCCCTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLWFSSR*VRALGP
Trigger: GGGGCCTAGGGCTCTGACCCATCTGGAGGAAAACCA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGAAACCCACAGGGCATaGGGCACACCTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVETHRA*GTPAAQ
Trigger: CTGAGCAGCAGGTGTGCCCCATGCCCTGTGGGTTTC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGCCTATTGGCCAGGATaGAACTGGGAGCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVAYWPG*NWEQGG
Trigger: CCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATGGGGACCCAGCGTGTaGCCCAATGAGTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRWGPSV*PNEWQF
Trigger: AAACTGCCACTCATTGGGCCACACGCTGGGTCCCCA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGTGATAAAGGACACCTaGAAAGTGGCAGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRVIKDT*KVAGQG
Trigger: CCCTTGGCCTGCCACTTTCCAGGTGTCCTTTATCAC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACAGGGCCACATCCTCTaGAGACTCACCCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRQGHIL*RLTHLE
Trigger: TTCAAGGTGGGTGAGTCTTCAGAGGATGTGGCCCTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTACACCGACTGGGGCCTaGCCGCCACCTGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFTPTGA*PPPAAL
Trigger: GAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCTGGACAGCCACACTaGTTTCCTCTTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAGQPH*FPLGTA
Trigger: GGCAGTTCCAAGAGGAAATCAGTGTGGCTGTCCAGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGTGGTCCAGTCCAACTaGGATGCTCTGTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRVVQSN*DALCLA
Trigger: TGCCAAGCACAGAGCATCTCAGTTGGACTGGACCAC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGTGGTCCAGTCCAACTaGGATGCTCTGTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLVVQSN*DALCLA
Trigger: TGCCAAGCACAGAGCATCTCAGTTGGACTGGACCAC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTTTTCCTGGATGCCTaGGCAACTCCCAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLFLDA*ATPSHP
Trigger: AGGATGGCTGGGAGTTGCTCAGGCATCCAGGAAAAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTTCCTGCCTAGAAACTaGACTGAGGGCACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRFLPRN*TEGTQF
Trigger: AAACTGGGTGCCCTCAGTTCAGTTTCTAGGCAGGAA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCAGGCTCAGCAAACTaGACCACCACAGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAGSAN*TTTGVR
Trigger: TCTGACACCTGTGGTGGTTCAGTTTGCTGAGCCTGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTGTAAGGCTGCACGGTaGCATACTTCTCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLCKAAR*HTSPLG
Trigger: GCCGAGAGGAGAAGTATGTCACCGTGCAGCCTTACA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTTCTTCAGGTAGGATaGTGGCGCCCAGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLLQVG*WRPALF
Trigger: AAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGAACGCCCACGGCACTaGCATTGGAGGCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVERPRH*HWRHCR
Trigger: TCTGCAATGCCTCCAATGGCAGTGCCGTGGGCGTTC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCCTTCTCACCGATCTaGACGTACCACCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSFSPI*TYHQPP
Trigger: AGGTGGCTGGTGGTACGTGCAGATCGGTGAGAAGGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGGACAGCGAGGAGCTaGCTGGGGAGTCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGTARS*LGSRCP
Trigger: GGGACAGCGACTCCCCAGGCAGCTCCTCGCTGTCCC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCAGGCTGTCTGATTTaGCTTCGTTCTGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPGCLI*LRSACP
Trigger: AGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCAGTCCAACTGAGATaGTCTGTGCTTGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPVQLR*SVLGRH
Trigger: ATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTATGGGGCACACCTGCTaGTCAGGGTTGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIMGHTC*SGLPLS
Trigger: GGAAAGGGGCAACCCTGAGCAGCAGGTGTGCCCCAT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGCATGGGGCACACCTaGTGCTCAGGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGMGHT*CSGLPL
Trigger: AAGGGGCAACCCTGAGCAGCAGGTGTGCCCCATGCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGGTGGGAGTCAGCCTaGTCGATGACACGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGWESA*SMTRLQ
Trigger: CTGCAGACGTGTCATCGAGCAGGCTGACTCCCACCC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCGGGAGTCACTTCCTaGAGACCTCTGAGTACCTGG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPGVTS*RPLSTW
Trigger: CCAGGTACTCAGAGGTCTGCAGGAAGTGACTCCCGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCCTCTCGGCTGTGCTaGCTGTTGACCATCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSSRLC*LLTIPP
Trigger: GGGCGGGATGGTCAACAGGCAGCACAGCCGAGAGGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTCTCCTCTCGGCTGTaGTGCCTGTTGACCATCCCG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPFSSRL*CLLTIP
Trigger: CGGGATGGTCAACAGGCAGCACAGCCGAGAGGAGAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCCAATGATCTCCACTaGGCCGGCCAGGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPNDLH*AGQVLL
Trigger: AAGAAGAACCTGGCCGGCCCAGTGGAGATCATTGGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGTGGCTTTGGCAGTTaGAACCCCAGGCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGGFGS*NPRLDS
Trigger: AGAATCCAGCCTGGGGTTCCAACTGCCAAAGCCACC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGGTCGCCACTGGTTTTaGACAAGGAAGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRGRHWF*TRKRRR
Trigger: CCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTACGGTGTTCAGTGCTTaGACGCGCCTCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVTVFSA*TRLSIF
Trigger: GAAGATCGAGAGGCGCGTCCAAGCACTGAACACCGT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAACTTCTCGATGGGCTTaGGGCGCACAGGGGACACGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQTSRWA*GAQGTR
Trigger: CCGTGTCCCCTGTGCGCCCCAAGCCCATCGAGAAGT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCACCGCTCATCCAGTaGGCGGCCAGAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSPLIQ*AAREAH
Trigger: GTGTGCCTCTCTGGCCGCCCACTGGATGAGCGGTGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAGCTGTGGGATGGCTTaGACAGGGGGCATCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSCGMA*TGGIFE
Trigger: CTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAACAGTGACAATGGCCTaGCCCAGAAGCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRTVTMA*PRSRLE
Trigger: CTCAAGCCTGCTTCTGGGCCAGGCCATTGTCACTGT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTACAGTGACAATGGCCTaGCCCAGAAGCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVTVTMA*PRSRLE
Trigger: CTCAAGCCTGCTTCTGGGCCAGGCCATTGTCACTGT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAGCCCCAAATTTTTCTaGCAGGCGCCAAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSPKFF*QAPSSS
Trigger: GCTGGAGCTTGGCGCCTGCCAGAAAAATTTGGGGCT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCAGCCCTGCCCAGCTaGGGAACACACGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPALPS*GTHAEW
Trigger: CCATTCTGCGTGTGTTCCCCAGCTGGGCAGGGCTGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGCGACTCAGCCCAGCTaGACAGCCACACTGATTTCC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVATQPS*TATLIS
Trigger: GGAAATCAGTGTGGCTGTCCAGCTGGGCTGAGTCGC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGATTCCCCACTTTTCCTaGATGCCTGAGCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRIPHFS*MPEQLP
Trigger: TGGGAGTTGCTCAGGCATCCAGGAAAAGTGGGGAAT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATTTGTATGGACTCTCTaGGTGTGGAGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRFVWTL*VWSPGR
Trigger: CCTGCCTGGGCTCCACACCCAGAGAGTCCATACAAA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGGAAGGAGGCCAGATTaGTACCTGTTGTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRGRRPD*YLLWEV
Trigger: AACTTCCCACAACAGGTACCAATCTGGCCTCCTTCC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTTCCCAGGAAGTGTTTaGTCTGGCCCTGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVFPGSV*SGPAVG
Trigger: CCCAACTGCAGGGCCAGACCAAACACTTCCTGGGAA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCAGTGTGCCCACCTTATaGCCTGGGGACCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSVPTL*PGDPGL
Trigger: CAAACCTGGGTCCCCAGGCCATAAGGTGGGCACACT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGCTCAGCTCAGGCTCTaGGTCAAAGCCGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIAQLRL*VKAECR
Trigger: CCTGCATTCGGCTTTGACTCAGAGCCTGAGCTGAGC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAAGGCACCCAGCCTTTaGAGGGCTTCACACCATCCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPKAPSL*RASHHP
Trigger: TGGATGGTGTGAAGCCCTTCAAAGGCTGGGTGCCTT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGACAGGGGGCATCTTTaGGGTCACCCATTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPDRGHL*GHPFCS
Trigger: ACTGCAGAATGGGTGACCTCAAAGATGCCCCCTGTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCTGGACAGCCACACTaGTTTCCTCTTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAGQPH*FPLGTA
Trigger: GGCAGTTCCAAGAGGAAATCAGTGTGGCTGTCCAGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCTGAAGTCGCTGAGATaGATGGGCAGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILKSLR*MGSPGS
Trigger: TGAGCCTGGGCTGCCCATTCATCTCAGCGACTTCAG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTTCTCTACCGGTGCTaGGGAAGGAGGCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVFLYRC*GRRPDW
Trigger: CCAATCTGGCCTCCTTCCTCAGCACCGGTAGAGAAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGAACCACAGAGACATaGGACTGCACCAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGTTET*DCTKQG
Trigger: GCCCTGTTTGGTGCAGTCTCATGTCTCTGTGGTTCC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCATTCATTGAGAACTaGTGGGGACCCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPFIEN*WGPSVW
Trigger: CCACACGCTGGGTCCCCATCAGTTCTCAATGAATGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTCAATGACCATTCATTaGGAACTGATGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSMTIH*ELMGTQ
Trigger: CTGGGTCCCCATCAGTTCTCAATGAATGGTCATTGA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCTTCCTGCAGACCTCTaGGTACCTGGTGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILPADL*VPGGET
Trigger: GGTTTCCCCACCAGGTACTCAGAGGTCTGCAGGAAG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGAACGCCCACGGCACTaGCATTGGAGGCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIERPRH*HWRHCR
Trigger: TCTGCAATGCCTCCAATGGCAGTGCCGTGGGCGTTC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCAGGCTGGATTCTCTaGGTGGTGGAGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPGWIL*VVEVLS
Trigger: GGACAAGACCTCCACCACGCAGAGAATCCAGCCTGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTCCTTCTCACCGATCTaGACGTACCACCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPSFSPI*TYHQPP
Trigger: AGGTGGCTGGTGGTACGTGCAGATCGGTGAGAAGGA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTATCAGCATCCTTCTTTaGCCTGACCTTGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVISILL*PDLGSA
Trigger: GGCACTCCCAAGGTCAGGGCAAAGAAGGATGCTGAT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCTTCTGGTAGGCGCTaGATGTCATGTACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPSGRR*MSCTRW
Trigger: CCACCTCGTACATGACATGCAGCGCCTACCAGAAGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTGCTTCTCCAGCACCTaGACCTCCACGCCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFCFSST*TSTPAG
Trigger: CCCCGCGGGCGTGGAGGTGCAGGTGCTGGAGAAGCA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGTTGACGGTGTTCAGTaGTTGGACGCGCCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVVDGVQ*LDAPLD
Trigger: ATCGAGAGGCGCGTCCAAGCACTGAACACCGTCAAC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCTGGGGTGGCAAGATaGCAGCAATCAAAACTGGGC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPGVAR*QQSKLG
Trigger: GCCCAGTTTTGATTGCTGGCATCTTGCCACCCCAGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCTGGGGTGGCAAGATaGCAGCAATCAAAACTGGGC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPGVAR*QQSKLG
Trigger: GCCCAGTTTTGATTGCTGGCATCTTGCCACCCCAGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGTGTCCTCCATGGGGTaGCCCACGGAGAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFVSSMG*PTESGL
Trigger: GAGCCCGCTCTCCGTGGGGCACCCCATGGAGGACAC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCACCTCTCCCGAAACATaGAAAGGAACTGCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVTSPET*KGTARP
Trigger: TGGGCGGGCAGTTCCTTTGCATGTTTCGGGAGAGGT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTACTGAACTGGCTCAGTaGAGACATCTGAGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLTELAQ*RHLRSE
Trigger: CTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTGGCAGACATGCTCTaGACTCCCTCCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLADML*TPSWPG
Trigger: GCCAGGCCAGGAGGGAGTGCAGAGCATGTCTGCCAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCCACTTTTCCTGGATaGCTGAGCAACTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPTFPG*LSNSQP
Trigger: TGGCTGGGAGTTGCTCAGGCATCCAGGAAAAGTGGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGTGAGGGGGCGAGGTaGGAAGACTGGGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGEGAR*EDWGMA
Trigger: TGCCATGCCCCAGTCTTCGCACCTCGCCCCCTCACC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCGAGGGCCTGCCTCTaGTCCAGGGACTGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPRACL*SRDWGL
Trigger: TAGGCCCCAGTCCCTGGAGCAGAGGCAGGCCCTCGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGGGTGAGAGAGGGCTaGTGGGAGTCATTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGVREG*WESFLG
Trigger: GCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTGTCTCACCAGGGTGTaGGCGGCTCAAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPICLTRV*AAQGSH
Trigger: GTGAGAACCTTGAGCCGCGCACACCCTGGTGAGACA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGGTGGGAGTCAGCCTaGTCGATGACACGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGWESA*SMTRLQ
Trigger: CTGCAGACGTGTCATCGAGCAGGCTGACTCCCACCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCAGGTCTTGTTGGGTaGACCGTGAGCAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAGLVG*TVSKFS
Trigger: TGAGAACTTGCTCACGGTGCACCCAACAAGACCTGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTGGGGACCCAGGTTTaGAGGAGGGAAGTTAACAGT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLGTQV*RREVNS
Trigger: ACTGTTAACTTCCCTCCTGCAAACCTGGGTCCCCAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGAGGATTTTCCAACCTaGTATGGCTGGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVEDFPT*YGWTLG
Trigger: CCCAAGGGTCCAGCCATAGCAGGTTGGAAAATCCTC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCTCTTATGGGGAGTGTaGCTTGGTTATAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLLWGV*LGYKAT
Trigger: CGTTGCCTTATAACCAAGGCACACTCCCCATAAGAG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAACAGAAGGGGGCTCTaGTGGCTTTGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLNRRGL*WLWQLE
Trigger: TTCCAACTGCCAAAGCCACCAGAGCCCCCTTCTGTT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGTGTCCTCTGCATATaGCCGGAAGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGVLCI*PEALIL
Trigger: GAGAATGAGGGCTTCCGGCCATATGCAGAGGACACC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGAGTGATGATGACTTaGGGGAGCCTGATTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGVMMT*GSLIWG
Trigger: CCCCCAAATCAGGCTCCCCCAAGTCATCATCACTCC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAAGGAGGCTGAGGAGTaGTTCTTCCCCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLKEAEE*FFPISA
Trigger: GGCAGAAATGGGGAAGAACCACTCCTCAGCCTCCTT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTATGTCATGTACGAGGTaGCTGGCCCTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLMSCTR*LALPIP
Trigger: AGGAATGGGAAGGGCCAGCCACCTCGTACATGACAT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTACGGTGTTCAGTGCTTaGACGCGCCTCTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPTVFSA*TRLSIF
Trigger: GAAGATCGAGAGGCGCGTCCAAGCACTGAACACCGT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTACAGGTTGTTGTCCTTaGGTGGCGGGGACACAAACA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVTGCCP*VAGTQT
Trigger: TGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAGTCTGAACCCTGGCTaGCAGCCCGTTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKSLNPG*QPVRPG
Trigger: GCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTATGGACACCCCCTCCTaGAAGCCTGCTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIMDTPS*KPAVSS
Trigger: TGAGGAGACAGCAGGCTTCCAGGAGGGGGTGTCCAT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGACAGTTATGAAAGATaGTCTTTGCTGGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRDSYER*SLLAPG
Trigger: CCCAGGTGCCAGCAAAGACCATCTTTCATAACTGTC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCCATAGTCCTCTTTTaGAGGGTTGACATCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRAIVLF*RVDILG
Trigger: CCCGAGGATGTCAACCCTCCAAAAGAGGACTATGGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCTCTCGGGAGCACTGTaGTCCAGTCCAACTGAGATG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLSGAL*SSPTEM
Trigger: CATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCTCTCTGAGCGCCACTaGTATTCCCTCCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLSERH*YSLHCP
Trigger: GGGACAATGGAGGGAATACCAGTGGCGCTCAGAGAG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTCCCTTTCTTCTGGGTaGATCTGGCAGGGACCCCTA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSLSSG*IWQGPL
Trigger: TAGGGGTCCCTGCCAGATCCACCCAGAAGAAAGGGA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCTGGGATCAAGACCTTaGAAGGTAGGGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLGSRP*KVGLST
Trigger: GGTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGAGCCCACTAAGAGCTaGGAGGGGAATTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPEPTKS*EGNSMR
Trigger: CCTCATGGAATTCCCCTCCCAGCTCTTAGTGGGCTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGTACCACCAGCCACCTaGGTTCTTATCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLVPPAT*VLINDL
Trigger: GAGGTCATTGATAAGAACTCAGGTGGCTGGTGGTAC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCGCTTATCGATGTATaGTGCGGGGGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKALIDV*CGGPAL
Trigger: GAGGGCTGGGCCCCCGCATCATACATCGATAAGCGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAAGACTCACCCACCTTaGAGCGGGCCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKKTHPP*SGPAAE
Trigger: CTCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTACACCGACTGGGGCCTaGCCGCCACCTGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEITPTGA*PPPAAL
Trigger: GAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTGGGATAGAGACCTCTaGGGTCTCTTTCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVWDRDL*GLFQSC
Trigger: GCAGGACTGAAAGAGACCTCAGAGGTCTCTATCCCA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTTTGGAGCCTGGGATaGCTGCCTAGGCCACTTATG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVFWSLG*LPRPLM
Trigger: CATAAGTGGCCTAGGCAGTCATCCCAGGCTCCAAAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATACCCATGGCATGGCTaGGGGGTGGGAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKYPWHG*GVGVSL
Trigger: CAGGCTGACTCCCACCCCTCAGCCATGCCATGGGTA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAAAGCTGTGGGTCACTaGTCCTGTCTTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPKAVGH*SCLLTG
Trigger: GCCAGTGAGAAGACAGGATCAGTGACCCACAGCTTT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTCAGGTTGGGCTTCTTaGGCTTATCGATGTATGATG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSGWAS*AYRCMM
Trigger: CATCATACATCGATAAGCGCAAGAAGCCCAACCTGA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCATCAGCATCCTTCTTTaGCCTGACCTTGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVISILL*PDLGSA
Trigger: GGCACTCCCAAGGTCAGGGCAAAGAAGGATGCTGAT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGAGTGCCTGAGGTCTTaGCGAAGCCCCCGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKECLRS*RSPREV
Trigger: AACCTCCCGGGGGCTTCGGCAAGACCTCAGGCACTC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCTTCACCGCTGGAGTaGCTGAGGTCTTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSSPLE*LRSCRS
Trigger: GCTTCGGCAAGACCTCAGGCACTCCAGCGGTGAAGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCAGGGGACACGGGTATaGTGTTGCGCTGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFQGTRV*CCAGRA
Trigger: TGCCCGCCCAGCGCAACAGCATACCCGTGTCCCCTG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGACCCAAAATAGTCTGTaGAGATTAGGAAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRTQNSL*RLGRDR
Trigger: CCGGTCTCTTCCTAATCTGCACAGACTATTTTGGGT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCTGAGGAGCGAGGCTaGAGGGCCCTCCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSEERG*RALPLE
Trigger: TTCCAGGGGGAGGGCCCTGCAGCCTCGCTCCTCAGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTACTGAACTGGCTCAGTaGAGACATCTGAGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPTELAQ*RHLRSE
Trigger: CTCGCTCCTCAGATGTCTGCACTGAGCCAGTTCAGT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCAGTCCAACTGAGATaGTCTGTGCTTGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPVQLR*SVLGRH
Trigger: ATGTCTGCCAAGCACAGAGCATCTCAGTTGGACTGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTGCCCAAATCTACATaGTGTCACCAGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLPKST*CHQMAA
Trigger: TGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAGGTCAAGGGCCCCATaGCTGAATCCCTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPRSRAP*LNPFLL
Trigger: CAGAAGAAAGGGATTCAGGCATGGGGCCCTTGACCT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATGTCTCACCAGGGTGTaGGCGGCTCAAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQCLTRV*AAQGSH
Trigger: GTGAGAACCTTGAGCCGCGCACACCCTGGTGAGACA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGAGTCCCTTGGGACCTaGCCATTGCCAAGGACTTGT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIESLGT*PLPRTC
Trigger: ACAAGTCCTTGGCAATGGGCAGGTCCCAAGGGACTC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTACCACCTCCCCGGCCTaGAGGCTCAGCTCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFTTSPA*RLSSEF
Trigger: GAACTCGGAGCTGAGCCTCCAGGCCGGGGAGGTGGT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATTGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLAGHP*PSSGRM
Trigger: CATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGCAATGGGGGCCTCATaGCCCTCGCCTTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFAMGAS*PSPSAG
Trigger: ACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGTGGCTTTGGCAGTTaGAACCCCAGGCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGGFGS*NPRLDS
Trigger: AGAATCCAGCCTGGGGTTCCAACTGCCAAAGCCACC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCTCATTCTCATAGATaGTCTCCTCTTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPHSHR*SPLPGP
Trigger: TGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTTCCCCATTTCTGCCTaGGCATTCTTCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLFPISA*AFFSAL
Trigger: CAAGGCAGAGAAGAATGCCCAGGCAGAAATGGGGAA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGTCGCCACTGGTTTTaGACAAGGAAGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGRHWF*TRKRRR
Trigger: CCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCACGGAGCTGGCCTGTaGGTCTCAGCTGGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFHGAGL*VSAGAV
Trigger: TACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGTGGCCTTCTTGCTCTaGTTGACGGTGTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPVAFLL*LTVFSA
Trigger: AGCACTGAACACCGTCAACCAGAGCAAGAAGGCCAC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAACACCATCCAGGATCTaGCAGTACCACCAGCCATTA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRTPSRI*QYHQPL
Trigger: TAATGGCTGGTGGTACTGCCAGATCCTGGATGGTGT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATGTATACGTAGTGCTTaGAGGGGTTCCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRCIRSA*RGSSAS
Trigger: AGAAGCGGAGGAACCCCTCCAAGCACTACGTATACA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGCAGGGCCCTCCCCCTaGAAGATAGCTACATTGAAG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIAGPSP*KIATLK
Trigger: CTTCAATGTAGCTATCTTCCAGGGGGAGGGCCCTGC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGAGATGCTCTGTGCTTaGCAGACATGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPEMLCA*QTCSAL
Trigger: GAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTATGTCGGAGAAGGACTaGCATGCACCCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLMSEKD*HAPFLL
Trigger: AAGCAAGAAGGGTGCATGCCAGTCCTTCTCCGACAT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCAGGCGCACAAGGCCTaGTACCCCCTGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFQAHKA*YPLAMS
Trigger: CGACATGGCCAGGGGGTACCAGGCCTTGTGCGCCTG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAAGGCCCTCTCGCCCTaGCTAGGGCTAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFKALSP*LGLGGQ
Trigger: CTGGCCTCCTAGCCCTAGCCAGGGCGAGAGGGCCTT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGACGGGGCTGAGGCCTaGCAAGACAGCCCGTCTACA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKDGAEA*QDSPST
Trigger: TGTAGACGGGCTGTCTTGCCAGGCCTCAGCCCCGTC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGTCTCTCTGAGCAGCTaGCTGCACCACAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLVSLSS*LHHNRN
Trigger: ATTTCTGTTGTGGTGCAGCCAGCTGCTCAGAGAGAC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGTGAGAGAGGGCTGCTaGGAGTCATTTTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVVREGC*ESFLGQ
Trigger: CTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCAC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCAGGCTTGTGGGAATTaGTGTCTCACCAGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIQACGN*CLTRVC
Trigger: GCACACCCTGGTGAGACACCAATTCCCACAAGCCTG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGGAGCAGAATTTGTATaGACTCTCTGGGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRGAEFV*TLWVWS
Trigger: GCTCCACACCCAGAGAGTCCATACAAATTCTGCTCC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCTTCATTTTGGAGCCTaGGATGACTGCCTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLHFGA*DDCLGH
Trigger: GTGGCCTAGGCAGTCATCCCAGGCTCCAAAATGAAG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCCAGATGTGCCCAATaGAGTCTGAACTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPRCAQ*SLNSGS
Trigger: AGAACCAGAGTTCAGACTCCATTGGGCACATCTGGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp CACATGCTCACGCTTCAGGGATTACTGAAGTCTGCCTaGCCCGGGAGTCACTTCCTGCAGACCTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: HMLTLQGLLKSA*PGSHFLQTSEY
Trigger: GTACTCAGAGGTCTGCAGGAAGTGACTCCCGGGCAAGGCAGACTTCAGTAATCCCTGAAGCGTGAGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGTACCACCAGCCACCTaGGTTCTTATCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPVPPAT*VLINDL
Trigger: GAGGTCATTGATAAGAACTCAGGTGGCTGGTGGTAC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGCGCCGTAAAGTGCTaGTGTCCATCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGAVKC*CPSSLG
Trigger: GCCAAGAGAAGATGGACATCAGCACTTTACGGCGCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCTTCTTGCTCTGGTTaGCGGTGTTCAGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPSCSG*RCSVLG
Trigger: TCCAAGCACTGAACACCGTCAACCAGAGCAAGAAGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCATGTAATCCATTGGTaGAGTCCCTATGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVHVIHW*SPYGAQ
Trigger: CTGTGCACCATAGGGACTTCACCAATGGATTACATG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCGCAAACCAAAGGCCTaGCATATAAGCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVRKPKA*HISPKS
Trigger: TGATTTGGGGCTTATATGTCAGGCCTTTGGTTTGCG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTTCTCTACCGGTGCTaGGGAAGGAGGCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQFLYRC*GRRPDW
Trigger: CCAATCTGGCCTCCTTCCTCAGCACCGGTAGAGAAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGCAGGCTCAGCAAACTaGACCACCACAGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQAGSAN*TTTGVR
Trigger: TCTGACACCTGTGGTGGTTCAGTTTGCTGAGCCTGC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATGCCTTCGTTCTGCCTaGCCTTGGCGGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKCLRSA*PWRALC
Trigger: ACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCATCCCCCTCGTAGTCTaGGATAGAGACGTACACATC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVIPLVV*DRDVHI
Trigger: GATGTGTACGTCTCTATCGCAGACTACGAGGGGGAT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCCCTCCTGGAAGCCTaGTGTCTCCTCATCCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPLLEA*CLLIPL
Trigger: GAGGGGGATGAGGAGACAGCAGGCTTCCAGGAGGGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATTGGCAGACATGCTCTaGACTCCCTCCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLADML*TPSWPG
Trigger: GCCAGGCCAGGAGGGAGTGCAGAGCATGTCTGCCAA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCAATCCCTGTTCACTaGCCAAATCTACATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAIPVH*PNLHAV
Trigger: GACAGCATGTAGATTTGGGCAGTGAACAGGGATTGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCGCTCCCTGCCTCTTaGTCTCTGAGCGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPLPAS*SLSATG
Trigger: ACCAGTGGCGCTCAGAGAGCAAGAGGCAGGGAGCGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAGGTCAAGGGCCCCATaGCTGAATCCCTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIRSRAP*LNPFLL
Trigger: CAGAAGAAAGGGATTCAGGCATGGGGCCCTTGACCT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCAGTGGCATCTCTTTTaGACATCTTCATTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRQWHLF*TSSFWS
Trigger: GCTCCAAAATGAAGATGTGCAAAAGAGATGCCACTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACAGCTACCCCAAACATaGACATGCTCTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRQLPQT*TCSSHQ
Trigger: TTGGTGAGAAGAGCATGTGCATGTTTGGGGTAGCTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTCTGGAATCAGGGCCTaGAAACTCAAAGATTGGTTT +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSGIRA*KLKDWF
Trigger: AAACCAATCTTTGAGTTTGCAGGCCCTGATTCCAGA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCTCTTATGGGGAGTGTaGCTTGGTTATAAGGCAACG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLLLWGV*LGYKAT
Trigger: CGTTGCCTTATAACCAAGGCACACTCCCCATAAGAG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTGTCACGTCCTTCTTaGGCGACTCAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLSRPS*ATQPSW
Trigger: CCAGCTGGGCTGAGTCGCCCAAGAAGGACGTGACAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGTTCTTCTTCCGGGTTaGCAGGTCATCCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIVLLPG*QVILGL
Trigger: AAGGCCAAGGATGACCTGCCAACCCGGAAGAAGAAC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGGCTCTGGTGGCTTTaGCAGTTGGAACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGLWWL*QLEPQA
Trigger: AGCCTGGGGTTCCAACTGCCAAAGCCACCAGAGCCC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCTCATTCTCATAGATaGTCTCCTCTTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPHSHR*SPLPGP
Trigger: TGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTCCCCATTTCTGCCTaGGCATTCTTCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPFPISA*AFFSAL
Trigger: CAAGGCAGAGAAGAATGCCCAGGCAGAAATGGGGAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGCCGGACCGATGGCTTaGCCCGGGGACAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIAGPMA*PGDRRS
Trigger: TGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGAGGTTTGGAGGGGATaGGGGGCGTGGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFEVWRG*GAWPSC
Trigger: GCAAGAAGGCCACGCCCCCCATCCCCTCCAAACCTC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGTTGTTGTCCTTGGGTaGCGGGGACACAAACACCGA +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQVVVLG*RGHKHR
Trigger: TCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAAC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCTGGGTCCCAGGCCTaGGACTCCCTGGTCCATTCC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSGSQA*DSLVHS
Trigger: GGAATGGACCAGGGAGTCCCAGGCCTGGGACCCAGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCACGTCCACCACGGTaGCATCCTGCACGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPRPPR*HPARSR
Trigger: CCTACTGCGTGCAGGATGCCACCGTGGTGGACGTGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTGTATACGTAGTGCTTaGAGGGGTTCCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVCIRSA*RGSSAS
Trigger: AGAAGCGGAGGAACCCCTCCAAGCACTACGTATACA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCATTCCCCACTTTTCCTaGATGCCTGAGCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVIPHFS*MPEQLP
Trigger: TGGGAGTTGCTCAGGCATCCAGGAAAAGTGGGGAAT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTAGAATGCAAGGTATTTaGAGGGGTAGGGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVRMQGI*RGRGSE
Trigger: CTCACTTCCCCTACCCCTCCAAATACCTTGCATTCT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCAAATATCAGGACACTaGGGTGAGAGAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIQISGH*GERGLL
Trigger: CAGCAGCCCTCTCTCACCCCAGTGTCCTGATATTTG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCTGCTGCAGGCTTGTaGGAATTGGTGTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPAAGL*ELVSHQ
Trigger: CTGGTGAGACACCAATTCCCACAAGCCTGCAGCAGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTTGTATGGACTCTCTaGGTGTGGAGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQFVWTL*VWSPGR
Trigger: CCTGCCTGGGCTCCACACCCAGAGAGTCCATACAAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTCTGATCATGCAGCTTaGGAACCACAGAGACATGAG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSDHAA*EPQRHE
Trigger: CTCATGTCTCTGTGGTTCCCAAGCTGCATGATCAGA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCTGATCATGCAGCTTaGGAACCACAGAGACATGAG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSDHAA*EPQRHE
Trigger: CTCATGTCTCTGTGGTTCCCAAGCTGCATGATCAGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCCCACCTTATGGCCTaGGGACCCAGGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAHLMA*GPRFAG
Trigger: TCCTGCAAACCTGGGTCCCCAGGCCATAAGGTGGGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGAAGACATCCGCTTCTaGAAGCCTCCTTCCCTAATG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPEDIRF*KPPSLM
Trigger: CATTAGGGAAGGAGGCTTCCAGAAGCGGATGTCTTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCCAGATGTGCCCAATaGAGTCTGAACTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPRCAQ*SLNSGS
Trigger: AGAACCAGAGTTCAGACTCCATTGGGCACATCTGGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGCAGGCCAAGGGGCTaGTCCCTTCCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGRPRG*SLPQGH
Trigger: GTGCCCTTGGGGAAGGGACCAGCCCCTTGGCCTGCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGTGATAAAGGACACCTaGAAAGTGGCAGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIVIKDT*KVAGQG
Trigger: CCCTTGGCCTGCCACTTTCCAGGTGTCCTTTATCAC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATGGGATAGAGACCTCTaGGGTCTCTTTCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQWDRDL*GLFQSC
Trigger: GCAGGACTGAAAGAGACCTCAGAGGTCTCTATCCCA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCCAAAAAGATCTGGTaGCTTCTAGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPKKIW*LLGFLP
Trigger: AGGCAGGAAGCCTAGAAGTCACCAGATCTTTTTGGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTCTCTTTCACCTCTTaGGGCGCAGCCTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQFSFTS*GAAYWP
Trigger: TGGCCAATAGGCTGCGCCTCAAGAGGTGAAAGAGAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGTGGGCAAAACCAGCTaGGAACCCGGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFVGKTS*EPGSWM
Trigger: CATCCAGCTCCCGGGTTCTCAGCTGGTTTTGCCCAC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGTGGTCACTGCTCTTTaGGCCATACAACTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPVVTAL*AIQLER
Trigger: TCTCTCAAGTTGTATGGCTCAAAGAGCAGTGACCAC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATGGGTCCCTACTGTATaGCCCATTGTGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQWVPTV*PIVVTA
Trigger: AGCAGTGACCACAATGGGTCATACAGTAGGGACCCA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGTGCCCAATGGAGTCTaGACTCTGGTTCTAATTTGT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRVPNGV*TLVLIC
Trigger: ACAAATTAGAACCAGAGTTCAGACTCCATTGGGCAC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGGGTATATCCATGGATaGATGTTCATCACACCCAGT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRGYIHG*MFITPS
Trigger: ACTGGGTGTGATGAACATTCATCCATGGATATACCC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACGCTTCAGGGATTACTaGAGTCTGCCTTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKRFRDY*SLPCPG
Trigger: TCCCGGGCAAGGCAGACTTCAGTAATCCCTGAAGCG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGGCTGTGCTGCCTGTTaGCCATCCCGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGGCAAC*PSRPGS
Trigger: GGACCCTGGGCGGGATGGTCAACAGGCAGCACAGCC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCTTATCAATGACCTCTaGCTTCTGTCCACCCCGAAA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLINDL*LLSTPK
Trigger: TTTCGGGGTGGACAGAAGGCAGAGGTCATTGATAAG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTTCAGGTTGGGCTTCTTaGGCTTATCGATGTATGATG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLSGWAS*AYRCMM
Trigger: CATCATACATCGATAAGCGCAAGAAGCCCAACCTGA...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGGTCAGCGTGCTTGTaGGGCGGCTCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGSACL*GGSGWA
Trigger: AGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTGGGAGTGCCGCGGATaGCTGCGTCCGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIWECRG*LRPKQS
Trigger: GCTCTGCTTCGGACGCAGGCATCCGCGGCACTCCCA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGATTTGCCTTCGTTCTaGCTGCCCTTGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKDLPSF*LPLAGT
Trigger: AGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCATGAAAGATGGTCTTTaGTGGCACCTGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVMKDGL*WHLGTA
Trigger: AGCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCAT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCCTCCTCTGCCTGCTaGCGGCAGTATCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPSSAC*RQYPSA
Trigger: TGCTGAAGGATACTGCCGGCAGCAGGCAGAGGAGGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCTCCCTCCTCTGCCTaGTGCCGGCAGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPPSSA*CRQYPS
Trigger: TGAAGGATACTGCCGGCAGCAGGCAGAGGAGGGAGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCAGCACCCCGCTCCCTaGCTCTTGCTCTCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIQHPAP*LLLSER
Trigger: GCGCTCAGAGAGCAAGAGGCAGGGAGCGGGGTGCTG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGAGATCTGTGTCTGTaGAGAAATTCACCAAATAGG +
Preference number: 4 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRRDLCL*RNSPNR
Trigger: CCTATTTGGTGAATTTCTGCACAGACACAGATCTCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCAACCCGGGAGCTGGATaGATATATTCTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVNPGAG*IYSGIR
Trigger: CCTGATTCCAGAATATATGCATCCAGCTCCCGGGTT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGAGGGTGGCTGTTTTaGTGTTCTTTCTCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGGWLF*CSFSAV
Trigger: TACTGCAGAGAAAGAACAGCAAAACAGCCACCCTCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGGATTACTGAAGTCTaGCTTGCCCGGGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGITEV*LARESL
Trigger: AAGTGACTCCCGGGCAAGGCAGACTTCAGTAATCCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCTGCTTCTTATAGTTaGACACCACCACGTACTGTT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPASYS*TPPRTV
Trigger: AACAGTACGTGGTGGTGTCCAACTATAAGAAGCAGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGTTCTTCTTCCGGGTTaGCAGGTCATCCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQVLLPG*QVILGL
Trigger: AAGGCCAAGGATGACCTGCCAACCCGGAAGAAGAAC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGTTGGAACCCCAGGCTaGATTCTCTGCGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKVGTPG*ILCVVE
Trigger: CTCCACCACGCAGAGAATCCAGCCTGGGGTTCCAAC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAAACAGAAGGGGGCTCTaGTGGCTTTGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQNRRGL*WLWQLE
Trigger: TTCCAACTGCCAAAGCCACCAGAGCCCCCTTCTGTT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATGCGGCGGCTCAGGTTaGGCTTCTTGCGCTTATCGA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKCGGSG*ASCAYR
Trigger: TCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGTGAGTCTGAACCCTaGCTGGCAGCCCGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGESEP*LAARSA
Trigger: GGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAGGCCTGGGACTCCCTaGTCCATTCCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKRPGTP*SIPFLT
Trigger: AGTGAGGAAGGGAATGGACCAGGGAGTCCCAGGCCT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTATTACTTACAGCACTaGGGGTCAAGGAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIYYLQH*GSRRGG
Trigger: ACCCCCTCTCCTTGACCCCCAGTGCTGTAAGTAATA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTATGTCGGAGAAGGACTaGCATGCACCCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIMSEKD*HAPFLL
Trigger: AAGCAAGAAGGGTGCATGCCAGTCCTTCTCCGACAT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCTTCTGGGTGGATCTaGCAGGGACCCCTATCATCT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSSGWI*QGPLSS
Trigger: AGATGATAGGGGTCCCTGCCAGATCCACCCAGAAGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGATTGGTACCTGTTGTaGGAAGTTTTGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVDWYLL*EVLSAE
Trigger: CTCTGCAGACAAAACTTCCCACAACAGGTACCAATC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGAAGGAGGCCAGATTaGTACCTGTTGTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGRRPD*YLLWEV
Trigger: AACTTCCCACAACAGGTACCAATCTGGCCTCCTTCC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACTTCATTTTGGAGCCTaGGATGACTGCCTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLHFGA*DDCLGH
Trigger: GTGGCCTAGGCAGTCATCCCAGGCTCCAAAATGAAG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAACCTGCAGGTCTTGTTaGGTGCACCGTGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQTCRSC*VHREQV
Trigger: AACTTGCTCACGGTGCACCCAACAAGACCTGCAGGT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATTGAGAGACTGGCTTTaGATTGGACAGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLRDWL*IGQSKG
Trigger: TCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCTGTATGACCCATTGTaGTCACTGCTCTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLYDPL*SLLFEP
Trigger: TGGCTCAAAGAGCAGTGACCACAATGGGTCATACAG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGGCAGGCCAAGGGGCTaGTCCCTTCCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGGRPRG*SLPQGH
Trigger: GTGCCCTTGGGGAAGGGACCAGCCCCTTGGCCTGCC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp CTCCCACATGGCCTGTCCCAGATGGCATGTAATCCATaGGTGAAGTCCCTATGGTGCACAGGATATCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPHGLSQMACNP*VKSLWCTGYLS
Trigger: GCTGAGATATCCTGTGCACCATAGGGACTTCACCAATGGATTACATGCCATCTGGGACAGGCCATGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTGATCTGGGCCCGCTaGGGGGCAATCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLIWAR*GAILAT
Trigger: TGTGGCCAGGATTGCCCCTCAGCGGGCCCAGATCAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACACTCTTGGAGCCCTTaGGCCCTCCACGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGHSWSP*ALHGAG
Trigger: GCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGGTGATGAGGTCGGATaGGCTTCTCCTAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFGDEVG*ASPRPL
Trigger: GAGGGGTCTAGGAGAAGCTCATCCGACCTCATCACC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTATTGTGGATGAACTaGGACTTCTCGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLLWMN*DFSMGL
Trigger: CAAGCCCATCGAGAAGTCTCAGTTCATCCACAATAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCATGTAATCCATTGGTaGAGTCCCTATGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIHVIHW*SPYGAQ
Trigger: CTGTGCACCATAGGGACTTCACCAATGGATTACATG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACAGACCAGGTCACATTaGTTATGTATACGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRQTRSH*LCIRSA
Trigger: AGCACTACGTATACATAATCAATGTGACCTGGTCTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCTGCCTCTTGCTCTCTaGGCGCCACTGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFLPLAL*APLVFP
Trigger: AGGGAATACCAGTGGCGCTCAGAGAGCAAGAGGCAG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATTGTTGGGTGCACCGTaGGCAAGTTCTCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLLGAP*ASSHPN
Trigger: GTTGGGGTGAGAACTTGCTCACGGTGCACCCAACAA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGTGCCCAATGGAGTCTaGACTCTGGTTCTAATTTGT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPVPNGV*TLVLIC
Trigger: ACAAATTAGAACCAGAGTTCAGACTCCATTGGGCAC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCGCTTCAGGGATTACTaGAGTCTGCCTTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFRFRDY*SLPCPG
Trigger: TCCCGGGCAAGGCAGACTTCAGTAATCCCTGAAGCG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAAGCCAATCTCGTCCTTaGTTTGGCTGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSQSRP*FGWCKA
Trigger: AGCCTTACACCAGCCAAAGCAAGGACGAGATTGGCT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTTCTTCAGGTAGGATaGTGGCGCCCAGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLLQVG*WRPALF
Trigger: AAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACCTTCTGGTAGGCGCTaGATGTCATGTACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKPSGRR*MSCTRW
Trigger: CCACCTCGTACATGACATGCAGCGCCTACCAGAAGG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCAGAGGGGTCAGGTTaGTCGTTCTCATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPEGSG*SFSSST
Trigger: GGTGCTGGATGAGAACGAGCAACCTGACCCCTCTGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGGCCTGACCGCCACCTaGCGCACTCCGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGGLTAT*RTPFLI
Trigger: GATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTATTTCCTCTTGGAACTaGCATAGTCCTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLISSWN*HSPLLE
Trigger: CTCCAAAAGAGGACTATGGCAGTTCCAAGAGGAAAT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTATTTCCTCTTGGAACTaGCATAGTCCTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVISSWN*HSPLLE
Trigger: CTCCAAAAGAGGACTATGGCAGTTCCAAGAGGAAAT...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGAGAAGGACTGGCATaGACCCTTCTTGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGEGLA*TLLASS
Trigger: ACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGCATGGGGCACACCTaGTGCTCAGGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGMGHT*CSGLPL
Trigger: AAGGGGCAACCCTGAGCAGCAGGTGTGCCCCATGCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACAGCACCCCGCTCCCTaGCTCTTGCTCTCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGQHPAP*LLLSER
Trigger: GCGCTCAGAGAGCAAGAGGCAGGGAGCGGGGTGCTG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGAGGGTGGCTGTTTTaGTGTTCTTTCTCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGGWLF*CSFSAV
Trigger: TACTGCAGAGAAAGAACAGCAAAACAGCCACCCTCC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCCCGGAGGAGCCTCTaGCTGACAGGGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPRRSL*LTGCPL
Trigger: CAGAGGACACCCTGTCAGCCAGAGGCTCCTCCGGGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGAGTGATGATGACTTaGGGGAGCCTGATTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGVMMT*GSLIWG
Trigger: CCCCCAAATCAGGCTCCCCCAAGTCATCATCACTCC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGTATGCTGTTGCGCTaGGCGGGCAGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGMLLR*AGSRGE
Trigger: CTCACCCCTACTGCCCGCCCAGCGCAACAGCATACC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTATGGACACCCCCTCCTaGAAGCCTGCTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFMDTPS*KPAVSS
Trigger: TGAGGAGACAGCAGGCTTCCAGGAGGGGGTGTCCAT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTGGTGAAGTCCCTATaGTGCACAGGATATCTCAGC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILVKSL*CTGYLS
Trigger: GCTGAGATATCCTGTGCACCATAGGGACTTCACCAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCAGTCCAGGGACCCTaGCAGCTGAATCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPVQGP*QLNRWL
Trigger: CAGCCACCGATTCAGCTGCCAGGGTCCCTGGACTGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCTGGCCACCTTCAATaGGAAACTTATCCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSGHLQ*ETYPKA
Trigger: AGCTTTTGGATAAGTTTCCCATTGAAGGTGGCCAGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCTAGCTGTGGGATTTTaGAAAAGTTGTTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLLAVGF*KSCFLS
Trigger: GGACAGGAAACAACTTTTCCAAAATCCCACAGCTAG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCAGCCATCCTTGGGGCTaGATGTCACAATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSHPWG*MSQCKH
Trigger: ATGTTTACATTGTGACATCCAGCCCCAAGGATGGCT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGCGAAGACTGGGGCATaGCAATCCCTGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFAKTGA*QSLFTA
Trigger: GGCAGTGAACAGGGATTGCCATGCCCCAGTCTTCGC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTCAGTCGCAACTCATaGGAAACTAGGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPFSRNS*ETRFGH
Trigger: GTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTCTGCTCCAGGGACTaGGGCCTAGAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILCSRD*GLEVKG
Trigger: GCCCTTGACCTCTAGGCCCCAGTCCCTGGAGCAGAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGTCTCTCTGAGCAGCTaGCTGCACCACAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQVSLSS*LHHNRN
Trigger: ATTTCTGTTGTGGTGCAGCCAGCTGCTCAGAGAGAC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGAGCAGAATTTGTATaGACTCTCTGGGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGAEFV*TLWVWS
Trigger: GCTCCACACCCAGAGAGTCCATACAAATTCTGCTCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTAAAAAGACAGGATTaGGGAAGGGGGATTGCATGC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLKRQD*GRGIAC
Trigger: GCATGCAATCCCCCTTCCCCAATCCTGTCTTTTTAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGAAGACATCCGCTTCTaGAAGCCTCCTTCCCTAATG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQEDIRF*KPPSLM
Trigger: CATTAGGGAAGGAGGCTTCCAGAAGCGGATGTCTTC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTTTCCAACCTGCTATaGCTGGACCCTTGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIFSNLL*LDPWVL
Trigger: TAACACCCAAGGGTCCAGCCATAGCAGGTTGGAAAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTGGGGACCCAGCGTGTaGCCCAATGAGTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFWGPSV*PNEWQF
Trigger: AAACTGCCACTCATTGGGCCACACGCTGGGTCCCCA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTGAGAGACTGGCTTTaGATTGGACAGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLRDWL*IGQSKG
Trigger: TCCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGGTAGGGTATATCCATaGATGAATGTTCATCACACC +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRGRVYP*MNVHHT
Trigger: GGTGTGATGAACATTCATCCATGGATATACCCTACC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGTAGGGTATATCCATaGATGAATGTTCATCACACC +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGRVYP*MNVHHT
Trigger: GGTGTGATGAACATTCATCCATGGATATACCCTACC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAATTCTCCAAGGTTCTaGAGCTCCAGAGACATCCAC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPINSPRF*SSRDIH
Trigger: GTGGATGTCTCTGGAGCTCCAGAACCTTGGAGAATT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCAGGGCCACATCCTCTaGAGACTCACCCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFQGHIL*RLTHLE
Trigger: TTCAAGGTGGGTGAGTCTTCAGAGGATGTGGCCCTG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGGCGCCGTAAAGTGCTaGTGTCCATCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFGAVKC*CPSSLG
Trigger: GCCAAGAGAAGATGGACATCAGCACTTTACGGCGCC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTATTGTGGATGAACTaGGACTTCTCGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILLWMN*DFSMGL
Trigger: CAAGCCCATCGAGAAGTCTCAGTTCATCCACAATAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCTTCGGGCATTATATaGACCTCAATAATGACCTCA +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSSGII*TSIMTS
Trigger: TGAGGTCATTATTGAGGTTCATATAATGCCCGAAGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACAGAGAGCTCTGCTTTaGGATTCTCAAAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRQRALL*DSQRLN
Trigger: ATTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATACCCATGGCATGGCTaGGGGGTGGGAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGYPWHG*GVGVSL
Trigger: CAGGCTGACTCCCACCCCTCAGCCATGCCATGGGTA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCAATGACCATTCATTaGGAACTGATGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSMTIH*ELMGTQ
Trigger: CTGGGTCCCCATCAGTTCTCAATGAATGGTCATTGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTGAGCCATACAACTTaGGAGACTGGCTTTGGATTG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILSHTT*ETGFGL
Trigger: CAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGTTGACGGTGTTCAGTaGTTGGACGCGCCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFVDGVQ*LDAPLD
Trigger: ATCGAGAGGCGCGTCCAAGCACTGAACACCGTCAAC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGTGAAGTCCCTATGGTaGACAGGATATCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIVKSLW*TGYLSF
Trigger: AAAGCTGAGATATCCTGTGCACCATAGGGACTTCAC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAATGAAAGATGGTCTTTaGTGGCACCTGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQMKDGL*WHLGTA
Trigger: AGCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCAT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAAACAAAGCACCAAATaGTGCATCTTCGGGCATTAT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRKQSTK*CIFGHY
Trigger: ATAATGCCCGAAGATGCAGCATTTGGTGCTTTGTTT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTATGGGGCACACCTGCTaGTCAGGGTTGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIMGHTC*SGLPLS
Trigger: GGAAAGGGGCAACCCTGAGCAGCAGGTGTGCCCCAT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGGGGTGAGAGAGGGCTaGTGGGAGTCATTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFGVREG*WESFLG
Trigger: GCCTAAAAATGACTCCCAGCAGCCCTCTCTCACCCC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTGGGGACCCAGGTTTaGAGGAGGGAAGTTAACAGT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLGTQV*RREVNS
Trigger: ACTGTTAACTTCCCTCCTGCAAACCTGGGTCCCCAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGAGGATTTTCCAACCTaGTATGGCTGGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKEDFPT*YGWTLG
Trigger: CCCAAGGGTCCAGCCATAGCAGGTTGGAAAATCCTC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAAACCCGGGAGCTGGATaGATATATTCTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQNPGAG*IYSGIR
Trigger: CCTGATTCCAGAATATATGCATCCAGCTCCCGGGTT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTTGCTGTTCTTTCTCTaGAGTAAACTCTTATGGGGA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLLFFL*SKLLWG
Trigger: TCCCCATAAGAGTTTACTGCAGAGAAAGAACAGCAA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGGATTACTGAAGTCTaGCTTGCCCGGGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGITEV*LARESL
Trigger: AAGTGACTCCCGGGCAAGGCAGACTTCAGTAATCCC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAGCACTCAAATCGACTaGACTGAGTTTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSTQID*TEFNVL
Trigger: AAGGACATTAAACTCAGTGCAGTCGATTTGAGTGCT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCCAATGATCTCCACTaGGCCGGCCAGGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPNDLH*AGQVLL
Trigger: AAGAAGAACCTGGCCGGCCCAGTGGAGATCATTGGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTCTCCTTCTTGGCAATaGGGGCCTCATGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISPSWQ*GPHGPR
Trigger: GCGAGGGCCATGAGGCCCCCATTGCCAAGAAGGAGA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCTGAGGGGCAATCCTaGCCACAGCTGGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGAEGQS*PQLESP
Trigger: AGGGCTCTCCAGCTGTGGCCAGGATTGCCCCTCAGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAATGTCATGTACGAGGTaGCTGGCCCTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKMSCTR*LALPIP
Trigger: AGGAATGGGAAGGGCCAGCCACCTCGTACATGACAT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGTGGCCTTCTTGCTCTaGTTGACGGTGTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKVAFLL*LTVFSA
Trigger: AGCACTGAACACCGTCAACCAGAGCAAGAAGGCCAC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGACACAAACACCGACTaGGGCCTGACCGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGDTNTD*GLTATC
Trigger: GCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAACAGGTTGTTGTCCTTaGGTGGCGGGGACACAAACA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKTGCCP*VAGTQT
Trigger: TGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCAGCTTTCTTGGCTCTaGGTCCCAGGCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIQLSWL*VPGLGL
Trigger: GAGTCCCAGGCCTGGGACCCAGAGCCAAGAAAGCTG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGTACTGTGTCCTCCATaGGGTGCCCCACGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGVLCPP*GAPRRA
Trigger: CGCTCTCCGTGGGGCACCCCATGGAGGACACAGTAC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAGCCCCAAATTTTTCTaGCAGGCGCCAAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSPKFF*QAPSSS
Trigger: GCTGGAGCTTGGCGCCTGCCAGAAAAATTTGGGGCT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTCTGGCCACCTTCAATaGGAAACTTATCCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSGHLQ*ETYPKA
Trigger: AGCTTTTGGATAAGTTTCCCATTGAAGGTGGCCAGA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGCAGTATTCATCGATaGGCTTCAGTCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGSIHR*ASVSSQ
Trigger: CTGTGAAGAGACTGAAGCCCATCGATGAATACTGCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGAGATGCTCTGTGCTTaGCAGACATGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKEMLCA*QTCSAL
Trigger: GAGTGCAGAGCATGTCTGCCAAGCACAGAGCATCTC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTCAGTCGCAACTCATaGGAAACTAGGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIFSRNS*ETRFGH
Trigger: GTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCCCTTTCTTCTGGGTaGATCTGGCAGGGACCCCTA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSLSSG*IWQGPL
Trigger: TAGGGGTCCCTGCCAGATCCACCCAGAAGAAAGGGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTCTGCTCCAGGGACTaGGGCCTAGAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLCSRD*GLEVKG
Trigger: GCCCTTGACCTCTAGGCCCCAGTCCCTGGAGCAGAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGTGAGAGAGGGCTGCTaGGAGTCATTTTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKVREGC*ESFLGQ
Trigger: CTGGCCTAAAAATGACTCCCAGCAGCCCTCTCTCAC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCTGCTGCAGGCTTGTaGGAATTGGTGTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPAAGL*ELVSHQ
Trigger: CTGGTGAGACACCAATTCCCACAAGCCTGCAGCAGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATGTTTCTATTCCCAGTaGCATCTCTTTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRCFYSQ*HLFCTS
Trigger: AGATGTGCAAAAGAGATGCCACTGGGAATAGAAACA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTTTCCCCAAAGCTGTaGGTCACTGATCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQFSPKL*VTDPVF
Trigger: GAAGACAGGATCAGTGACCCACAGCTTTGGGGAAAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCTAGCCAGTTTCTGTaGCCAAATTTGGAGGATTTT +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPSQFL*PNLEDF
Trigger: AAAATCCTCCAAATTTGGCCACAGAAACTGGCTAGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTGCAAACTCAAAGATTaGTTTGTGGCTGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVCKLKD*FVAGDF
Trigger: GAAGTCACCAGCCACAAACCAATCTTTGAGTTTGCA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTGGATGCATATATTCTaGAATCAGGGCCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPWMHIF*NQGLQT
Trigger: AGTTTGCAGGCCCTGATTCCAGAATATATGCATCCA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGAGCCCACTAAGAGCTaGGAGGGGAATTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFEPTKS*EGNSMR
Trigger: CCTCATGGAATTCCCCTCCCAGCTCTTAGTGGGCTC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACATCCTTCTTTGCCCTaGCCTTGGGAGTGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGHPSLP*PWECRG
Trigger: TCCGCGGCACTCCCAAGGTCAGGGCAAAGAAGGATG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCCCAGAAGCAGGCTTaGGCTCAGAAGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGAQKQA*AQKTPP
Trigger: TGGGGGTGTCTTCTGAGCTCAAGCCTGCTTCTGGGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCTCTTTTGGAGGGTTaGCATCCTCGGGTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPLLEG*HPRVEP
Trigger: AGGCTCGACCCGAGGATGTCAACCCTCCAAAAGAGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTGCCTCTTGCTCTCTaGGCGCCACTGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILPLAL*APLVFP
Trigger: AGGGAATACCAGTGGCGCTCAGAGAGCAAGAGGCAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCTTCTCACTGGCTCTaGTCATGCAGCTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSSHWL*SCSLGT
Trigger: GGTTCCCAAGCTGCATGATCAGAGCCAGTGAGAAGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTGAGCCATACAACTTaGGAGACTGGCTTTGGATTG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLSHTT*ETGFGL
Trigger: CAATCCAAAGCCAGTCTCTCAAGTTGTATGGCTCAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGGTATATCCATGGATaGATGTTCATCACACCCAGT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGYIHG*MFITPS
Trigger: ACTGGGTGTGATGAACATTCATCCATGGATATACCC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCAGAGGGGTCAGGTTaGTCGTTCTCATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPEGSG*SFSSST
Trigger: GGTGCTGGATGAGAACGAGCAACCTGACCCCTCTGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAATCCCCCTCGTAGTCTaGGATAGAGACGTACACATC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKIPLVV*DRDVHI
Trigger: GATGTGTACGTCTCTATCGCAGACTACGAGGGGGAT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGTGAAGTCCCTATGGTaGACAGGATATCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQVKSLW*TGYLSF
Trigger: AAAGCTGAGATATCCTGTGCACCATAGGGACTTCAC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGAGAAGGACTGGCATaGACCCTTCTTGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGEGLA*TLLASS
Trigger: ACTTGAAGCAAGAAGGGTGCATGCCAGTCCTTCTCC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCTCCCTCCTCTGCCTaGTGCCGGCAGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPPSSA*CRQYPS
Trigger: TGAAGGATACTGCCGGCAGCAGGCAGAGGAGGGAGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCAAAGCACCAAATGCTaGATCTTCGGGCATTATATG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIQSTKC*IFGHYM
Trigger: CATATAATGCCCGAAGATGCAGCATTTGGTGCTTTG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTCTTCTCACCAACGTaGCTCTCACTTGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLFSPT*LSLASN
Trigger: GTTAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCCCAAACATGCACATaGTCTTCTCACCAACGTGCC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPQTCT*SSHQRA
Trigger: GGCACGTTGGTGAGAAGAGCATGTGCATGTTTGGGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCTTCCTCCCAGATGTaGCCAATGGAGTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPSSQM*PMESEL
Trigger: GAGTTCAGACTCCATTGGGCACATCTGGGAGGAAGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTTGCTGTTCTTTCTCTaGAGTAAACTCTTATGGGGA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLLFFL*SKLLWG
Trigger: TCCCCATAAGAGTTTACTGCAGAGAAAGAACAGCAA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGCCATGCAGTCCACATaGTCACGCTTCAGGGATTAC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFAMQST*SRFRDY
Trigger: GTAATCCCTGAAGCGTGAGCATGTGGACTGCATGGC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAGCACTCAAATCGACTaGACTGAGTTTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPSTQID*TEFNVL
Trigger: AAGGACATTAAACTCAGTGCAGTCGATTTGAGTGCT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTCGCCTTCGGCTGGTaGAGTTTCCTTGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILAFGW*SFLVPR
Trigger: TCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTGCGGCGGCTCAGGTTaGGCTTCTTGCGCTTATCGA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEICGGSG*ASCAYR
Trigger: TCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCTGTGGGTCTCAGCTaGCGCCGTAAAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPVGLS*RRKVLM
Trigger: CATCAGCACTTTACGGCGCCAGCTGAGACCCACAGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACCTGAAAGCCAGTGGTaGCTTCTAATGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKPESQW*LLMYPP
Trigger: AGGTGGGTACATTAGAAGCCACCACTGGCTTTCAGG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGCCATAGTCCTCTTTTaGAGGGTTGACATCCTCGGG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFAIVLF*RVDILG
Trigger: CCCGAGGATGTCAACCCTCCAAAAGAGGACTATGGC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTGGTTTTCCTCCAGATaGGTCAGAGCCCTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIWFSSR*VRALGP
Trigger: GGGGCCTAGGGCTCTGACCCATCTGGAGGAAAACCA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGATTGGTACCTGTTGTaGGAAGTTTTGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQDWYLL*EVLSAE
Trigger: CTCTGCAGACAAAACTTCCCACAACAGGTACCAATC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAATTATTTAGCAATGTaGACAGTTCTCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRNYLAM*TVLFPE
Trigger: CTCTGGGAAGAGAACTGTCCACATTGCTAAATAATT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTACCTGCAGGTCTTGTTaGGTGCACCGTGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFTCRSC*VHREQV
Trigger: AACTTGCTCACGGTGCACCCAACAAGACCTGCAGGT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCCCACCTTATGGCCTaGGGACCCAGGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGAHLMA*GPRFAG
Trigger: TCCTGCAAACCTGGGTCCCCAGGCCATAAGGTGGGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAGTGTGCCCACCTTATaGCCTGGGGACCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISVPTL*PGDPGL
Trigger: CAAACCTGGGTCCCCAGGCCATAAGGTGGGCACACT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTAAAAAGACAGGATTaGGGAAGGGGGATTGCATGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLKRQD*GRGIAC
Trigger: GCATGCAATCCCCCTTCCCCAATCCTGTCTTTTTAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATGGCCAGGATGGAACTaGGAGCAAGGCGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGWPGWN*EQGGDL
Trigger: AAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCAAAGATTGGTTTGTaGCTGGTGACTTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSKIGL*LVTSLC
Trigger: GCAGAGAGAAGTCACCAGCCACAAACCAATCTTTGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTGCAGTAAACTCTTATaGGGAGTGTGCCTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPICSKLL*GVCLGY
Trigger: ATAACCAAGGCACACTCCCCATAAGAGTTTACTGCA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp CTAGCTGTGGGATTTTGGAAAAGTTGTTTCCTGTCCTaGGGCCGCAGTAACAGGAAGGGATGGGATAGAGAC +
Preference number: 4 (lower is better)
Translates to: LAVGFWKSCFLS*GRSNRKGWDRD
Trigger: GTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGAAACAACTTTTCCAAAATCCCACAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp CACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCAGTaGGGACTAAACTTATATGCACCTGCAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HTSQEVFGLALQ*GLNLYAPAGLV
Trigger: AACAAGACCTGCAGGTGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACCAAACACTTCCTGGGAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp ACATGCACATGCTCTTCTCACCAACGTGCCTCTCACTaGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: TCTCSSHQRASH*PLTCSSHPFVL
Trigger: TAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGAGCATGTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTGTAAGGCTGCACGGTaGCATACTTCTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFCKAAR*HTSPLL
Trigger: GAGAAGAGGAGAAGTATGTCACCGTGCAGCCTTACA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355946.6
CDS-3UTR TCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTCTTCGGGCATTATATaGACCTCAATAATGACCTCA +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPISSGII*TSIMTS
Trigger: TGAGGTCATTATTGAGGTTCATATAATGCCCGAAGA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCCAAAAAGATCTGGTaGCTTCTAGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPKKIW*LLGFLP
Trigger: AGGCAGGAAGCCTAGAAGTCACCAGATCTTTTTGGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTGAAGTCGCTGAGATaGATGGGCAGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLKSLR*MGSPGS
Trigger: TGAGCCTGGGCTGCCCATTCATCTCAGCGACTTCAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGAACCACAGAGACATaGGACTGCACCAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGTTET*DCTKQG
Trigger: GCCCTGTTTGGTGCAGTCTCATGTCTCTGTGGTTCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAGCCAATCTCGTCCTTaGTTTGGCTGGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSQSRP*FGWCKA
Trigger: AGCCTTACACCAGCCAAAGCAAGGACGAGATTGGCT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTGTGTCCAGCTCTTTaGCAGAGGGGTCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILCPAL*QRGQVA
Trigger: AGCAACCTGACCCCTCTGGCAAAGAGCTGGACACAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATCTTCACCGCTGGAGTaGCTGAGGTCTTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGSSPLE*LRSCRS
Trigger: GCTTCGGCAAGACCTCAGGCACTCCAGCGGTGAAGA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGTCTCTTTCAGTCCTaGATTTTAATGACTCTATTA +
Preference number: 4 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGLFQS*ILMTLL
Trigger: TAATAGAGTCATTAAAATGCAGGACTGAAAGAGACC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCCACTTTTCCTGGATaGCTGAGCAACTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPTFPG*LSNSQP
Trigger: TGGCTGGGAGTTGCTCAGGCATCCAGGAAAAGTGGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCTGCCCAAATCTACATaGTGTCACCAGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFLPKST*CHQMAA
Trigger: TGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTACTAGGTTTGGACACTaGGGAGATTTTGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPTRFGH*GDFVFL
Trigger: AAGAAAAACAAAATCTCCGCAGTGTCCAAACCTAGT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAGAGATCTGTGTCTGTaGAGAAATTCACCAAATAGG +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIRDLCL*RNSPNR
Trigger: CCTATTTGGTGAATTTCTGCACAGACACAGATCTCT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGAGTCCCTTGGGACCTaGCCATTGCCAAGGACTTGT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIESLGT*PLPRTC
Trigger: ACAAGTCCTTGGCAATGGGCAGGTCCCAAGGGACTC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACAGTGGCATCTCTTTTaGACATCTTCATTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQQWHLF*TSSFWS
Trigger: GCTCCAAAATGAAGATGTGCAAAAGAGATGCCACTG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCTGTGGGTCTCAGCTaGCGCCGTAAAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPVGLS*RRKVLM
Trigger: CATCAGCACTTTACGGCGCCAGCTGAGACCCACAGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCCATTCCTTCTTGGTaGGACATGGGGGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPIPSW*DMGEWW
Trigger: CCACCACTCCCCCATGTCCCACCAAGAAGGAATGGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTTCCCATTCCTTCTTaGTGGGACATGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILPIPS*WDMGEW
Trigger: CCACTCCCCCATGTCCCACCAAGAAGGAATGGGAAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTTCCAGCTGTGGGATaGCTTGGACAGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLPAVG*LGQGAS
Trigger: AGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCGACTCAGCCCAGCTaGACAGCCACACTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGATQPS*TATLIS
Trigger: GGAAATCAGTGTGGCTGTCCAGCTGGGCTGAGTCGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTATTACTTACAGCACTaGGGGTCAAGGAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFYYLQH*GSRRGG
Trigger: ACCCCCTCTCCTTGACCCCCAGTGCTGTAAGTAATA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCGAGGTGCGAAGACTaGGGCATGGCAATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGARCED*GMAIPV
Trigger: AACAGGGATTGCCATGCCCCAGTCTTCGCACCTCGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCAGAAGGGCTCATTATaGTTAAAGTTGCAGTATACA +
Preference number: 4 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPQKGSL*LKLQYT
Trigger: TGTATACTGCAACTTTAACCATAATGAGCCCTTCTG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCAGAAGGGCTCATTATaGTTAAAGTTGCAGTATACA +
Preference number: 4 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVQKGSL*LKLQYT
Trigger: TGTATACTGCAACTTTAACCATAATGAGCCCTTCTG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTGTTTCTATTCCCAGTaGCATCTCTTTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: YLPAVGWLGQGASLRSPICFYSQ*HLFCTS
Trigger: AGATGTGCAAAAGAGATGCCACTGGGAATAGAAACA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTTCCCAGGAAGTGTTTaGTCTGGCCCTGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIFPGSV*SGPAVG
Trigger: CCCAACTGCAGGGCCAGACCAAACACTTCCTGGGAA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATTTTCCCCAAAGCTGTaGGTCACTGATCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKFSPKL*VTDPVF
Trigger: GAAGACAGGATCAGTGACCCACAGCTTTGGGGAAAA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACATTCTTCTCTGCCTTaGGCTTTAGGAGTGATGATG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKHSSLP*ALGVMM
Trigger: CATCATCACTCCTAAAGCTCAAGGCAGAGAAGAATG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAAAGGCACCCAGCCTTTaGAGGGCTTCACACCATCCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGKAPSL*RASHHP
Trigger: TGGATGGTGTGAAGCCCTTCAAAGGCTGGGTGCCTT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTCCATTGTCCCCAATaGGCCCTGGCATCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLHCPQ*ALASIL
Trigger: CAAGATGGATGCCAGGGCTCATTGGGGACAATGGAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAATGATGTGTGTGAATaGCACACTTGCTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKNDVCE*HTCCQK
Trigger: CTTCTGGCAGCAAGTGTGTCATTCACACACATCATT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTTTTGGAGCCTGGGATaGCTGCCTAGGCCACTTATG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIFWSLG*LPRPLM
Trigger: CATAAGTGGCCTAGGCAGTCATCCCAGGCTCCAAAA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATTGTTGGGTGCACCGTaGGCAAGTTCTCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLLGAP*ASSHPN
Trigger: GTTGGGGTGAGAACTTGCTCACGGTGCACCCAACAA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCATTCATTGAGAACTaGTGGGGACCCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPFIEN*WGPSVW
Trigger: CCACACGCTGGGTCCCCATCAGTTCTCAATGAATGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTGGGTCCCTACTGTATaGCCCATTGTGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIWVPTV*PIVVTA
Trigger: AGCAGTGACCACAATGGGTCATACAGTAGGGACCCA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCTTATCAATGACCTCTaGCTTCTGTCCACCCCGAAA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFLINDL*LLSTPK
Trigger: TTTCGGGGTGGACAGAAGGCAGAGGTCATTGATAAG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTGTGTCCAGCTCTTTaGCAGAGGGGTCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLCPAL*QRGQVA
Trigger: AGCAACCTGACCCCTCTGGCAAAGAGCTGGACACAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCACTTGCCTCTAACGTaGTCGAGCCATCCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFHLPLT*SSHPFV
Trigger: AACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAACTGGAATTCGGCAATaGTGTAGTACTCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKTGIRQ*CSTPPQ
Trigger: TTGAGGTGGAGTACTACACCATTGCCGAATTCCAGT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGGTGTCCTCTGCATATaGCCGGAAGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGGVLCI*PEALIL
Trigger: GAGAATGAGGGCTTCCGGCCATATGCAGAGGACACC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTTCCCATTCCTTCTTaGTGGGACATGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLPIPS*WDMGEW
Trigger: CCACTCCCCCATGTCCCACCAAGAAGGAATGGGAAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTCTCGGGAGCACTGTaGTCCAGTCCAACTGAGATG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLSGAL*SSPTEM
Trigger: CATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTCTTCTGGGTGGATCTaGCAGGGACCCCTATCATCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISSGWI*QGPLSS
Trigger: AGATGATAGGGGTCCCTGCCAGATCCACCCAGAAGA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACAGGCTTGTGGGAATTaGTGTCTCACCAGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGQACGN*CLTRVC
Trigger: GCACACCCTGGTGAGACACCAATTCCCACAAGCCTG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTGGGATCAAGACCTTaGAAGGTAGGGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLGSRP*KVGLST
Trigger: GGTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAATTCTCCAAGGTTCTaGAGCTCCAGAGACATCCAC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFNSPRF*SSRDIH
Trigger: GTGGATGTCTCTGGAGCTCCAGAACCTTGGAGAATT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCATTCTTCTCTGCCTTaGGCTTTAGGAGTGATGATG +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFHSSLP*ALGVMM
Trigger: CATCATCACTCCTAAAGCTCAAGGCAGAGAAGAATG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTTCTCCAGGCTGTCTaGTTTGCCTTCGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLLQAV*FAFVLP
Trigger: AGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATTCTCTTTCACCTCTTaGGGCGCAGCCTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGFSFTS*GAAYWP
Trigger: TGGCCAATAGGCTGCGCCTCAAGAGGTGAAAGAGAA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGGTTTGCAGGGTTTGTaGTGTGAGTTAGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGGLQGL*CELGGE
Trigger: CTCACCCCCTAACTCACAGCACAAACCCTGCAAACC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAACTAGGTTTGGACACTaGGGAGATTTTGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQTRFGH*GDFVFL
Trigger: AAGAAAAACAAAATCTCCGCAGTGTCCAAACCTAGT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACAAAGCACCAAATGCTaGATCTTCGGGCATTATATG +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKQSTKC*IFGHYM
Trigger: CATATAATGCCCGAAGATGCAGCATTTGGTGCTTTG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCAGGTCTTGTTGGGTaGACCGTGAGCAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGAGLVG*TVSKFS
Trigger: TGAGAACTTGCTCACGGTGCACCCAACAAGACCTGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAAACTTATATGCACCTaGAGGTCTTGTTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFKLICT*RSCWVH
Trigger: GTGCACCCAACAAGACCTGCAGGTGCATATAAGTTT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCCCAAACATGCACATaGTCTTCTCACCAACGTGCC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPQTCT*SSHQRA
Trigger: GGCACGTTGGTGAGAAGAGCATGTGCATGTTTGGGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACCTTCCTCCCAGATGTaGCCAATGGAGTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGPSSQM*PMESEL
Trigger: GAGTTCAGACTCCATTGGGCACATCTGGGAGGAAGG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCCATGCAGTCCACATaGTCACGCTTCAGGGATTAC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGAMQST*SRFRDY
Trigger: GTAATCCCTGAAGCGTGAGCATGTGGACTGCATGGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAAAGGAGGCTGAGGAGTaGTTCTTCCCCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGKEAEE*FFPISA
Trigger: GGCAGAAATGGGGAAGAACCACTCCTCAGCCTCCTT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGCTTCAGGTCGCCACTaGTTTTGGACAAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGASGRH*FWTRKR
Trigger: CCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACAGGGATACCTGGGGTaGCAAGATGCCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGQGYLG*QDASNQ
Trigger: TTGATTGCTGGCATCTTGCCACCCCAGGTATCCCTG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACCTAGCCAGTTTCTGTaGCCAAATTTGGAGGATTTT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKPSQFL*PNLEDF
Trigger: AAAATCCTCCAAATTTGGCCACAGAAACTGGCTAGG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCAAAGATTGGTTTGTaGCTGGTGACTTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSKIGL*LVTSLC
Trigger: GCAGAGAGAAGTCACCAGCCACAAACCAATCTTTGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATGCAGTAAACTCTTATaGGGAGTGTGCCTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKCSKLL*GVCLGY
Trigger: ATAACCAAGGCACACTCCCCATAAGAGTTTACTGCA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp CCCTTCTTGCTTCAAGTATTAATATTCTCTTTGGGTTaGCAGGGTTTGTGCTGTGAGTTAGGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PFLLQVLIFSLG*QGLCCELGGEG
Trigger: CCCCTCACCCCCTAACTCACAGCACAAACCCTGCAAACCCAAAGAGAATATTAATACTTGAAGCAAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp CTAATTTGTGGAGGTGGGTCCCTACTGTATGACCCATaGTGGTCACTGCTCTTTGAGCCATACAACTTGAGA +
Preference number: 4 (lower is better)
Translates to: LICGGGSLLYDP*WSLLFEPYNLR
Trigger: TCTCAAGTTGTATGGCTCAAAGAGCAGTGACCACAATGGGTCATACAGTAGGGACCCACCTCCACAAATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAATAAAAGTAGTAACATaGCTTGCTGAGGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SACCRQYPSASQSSSVAQIKVVT*LAEESN
Trigger: ATTGCTTTCCTCAGCAAGGCATGTTACTACTTTTAT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTCTTCTCACCAACGTaGCTCTCACTTGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLFSPT*LSLASN
Trigger: GTTAGAGGCAAGTGAGAGGCACGTTGGTGAGAAGAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATTGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLAGHP*PSSGRM
Trigger: CATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAAGCCTGAAAGCCAGTaGTGGCTTCTAATGTACCCA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIKPESQ*WLLMYP
Trigger: TGGGTACATTAGAAGCCACCACTGGCTTTCAGGCTT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACGCAAACCAAAGGCCTaGCATATAAGCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGRKPKA*HISPKS
Trigger: TGATTTGGGGCTTATATGTCAGGCCTTTGGTTTGCG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTACCCAAAATAGTCTGTaGAGATTAGGAAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEITQNSL*RLGRDR
Trigger: CCGGTCTCTTCCTAATCTGCACAGACTATTTTGGGT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACACTTGCCTCTAACGTaGTCGAGCCATCCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGHLPLT*SSHPFV
Trigger: AACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACAGCTACCCCAAACATaGACATGCTCTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGQLPQT*TCSSHQ
Trigger: TTGGTGAGAAGAGCATGTGCATGTTTGGGGTAGCTG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCCTGCTTCTTATAGTTaGACACCACCACGTACTGTT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIPASYS*TPPRTV
Trigger: AACAGTACGTGGTGGTGTCCAACTATAAGAAGCAGG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTACTGGAATTCGGCAATaGTGTAGTACTCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEITGIRQ*CSTPPQ
Trigger: TTGAGGTGGAGTACTACACCATTGCCGAATTCCAGT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAAGAATGCAAGGTATTTaGAGGGGTAGGGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGRMQGI*RGRGSE
Trigger: CTCACTTCCCCTACCCCTCCAAATACCTTGCATTCT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATTTTCCAACCTGCTATaGCTGGACCCTTGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGFSNLL*LDPWVL
Trigger: TAACACCCAAGGGTCCAGCCATAGCAGGTTGGAAAA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACTGTATGACCCATTGTaGTCACTGCTCTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGLYDPL*SLLFEP
Trigger: TGGCTCAAAGAGCAGTGACCACAATGGGTCATACAG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTCTGGTTCTAATTTGTaGAGGTGGGTCCCTACTGTA +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISGSNL*RWVPTV
Trigger: TACAGTAGGGACCCACCTCCACAAATTAGAACCAGA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp ATTTGGAGGATTTTCCAACCTGCTATGGCTGGACCCTaGGGTGTTAAATCACTAAATTCCCTTTCTACCTGC +
Preference number: 4 (lower is better)
Translates to: IWRIFQPAMAGP*GVKSLNSLSTC
Trigger: GCAGGTAGAAAGGGAATTTAGTGATTTAACACCCAAGGGTCCAGCCATAGCAGGTTGGAAAATCCTCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCAGACCAGGTCACATTaGTTATGTATACGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIQTRSH*LCIRSA
Trigger: AGCACTACGTATACATAATCAATGTGACCTGGTCTG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR TCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAAATGATGTGTGTGAATaGCACACTTGCTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGNDVCE*HTCCQK
Trigger: CTTCTGGCAGCAAGTGTGTCATTCACACACATCATT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTCTGGAATCAGGGCCTaGAAACTCAAAGATTGGTTT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISGIRA*KLKDWF
Trigger: AAACCAATCTTTGAGTTTGCAGGCCCTGATTCCAGA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTGCAAACTCAAAGATTaGTTTGTGGCTGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEICKLKD*FVAGDF
Trigger: GAAGTCACCAGCCACAAACCAATCTTTGAGTTTGCA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATCTGGTTCTAATTTGTaGAGGTGGGTCCCTACTGTA +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGSGSNL*RWVPTV
Trigger: TACAGTAGGGACCCACCTCCACAAATTAGAACCAGA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTATACTTGAGAATGACTaGTACCAACAAGACGACAAA +
Preference number: 4 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFILEND*YQQDDK
Trigger: TTTGTCGTCTTGTTGGTACCAGTCATTCTCAAGTAT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp TCTTTCTCTGCAGTAAACTCTTATGGGGAGTGTGCCTaGGTTATAAGGCAACGCAAAATGGTAGGGTATATC +
Preference number: 4 (lower is better)
Translates to: SFSAVNSYGECA*VIRQRKMVGYI
Trigger: GATATACCCTACCATTTTGCGTTGCCTTATAACCAAGGCACACTCCCCATAAGAGTTTACTGCAGAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR GCA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTATAAAAGTAGTAACATaGCTTGCTGAGGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIIKVVT*LAEESN
Trigger: ATTGCTTTCCTCAGCAAGGCATGTTACTACTTTTAT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CCA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAAATTATTTAGCAATGTaGACAGTTCTCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGNYLAM*TVLFPE
Trigger: CTCTGGGAAGAGAACTGTCCACATTGCTAAATAATT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
3UTR CAA 72 bp GCAATGTGGACAGTTCTCTTCCCAGAGAGCTCTGCTTaGAGATTCTCAAAGACTAAATATCTAGATGGATAT +
Preference number: 4 (lower is better)
Translates to: AMWTVLFPESSA*RFSKTKYLDGY
Trigger: ATATCCATCTAGATATTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTGGGAAGAGAACTGTCCACATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS CCA 90 bp AAGCGGGCCCGCTGCAGAGAAGAGGCCGGCGAGGGCCGGTGGGGCTaGGCAGGCCGCCTCTCCCCTGAGGCTCTGTCCTCCACGGGCTCC +
Preference number: 5 (lower is better)
Translates to: KRARCREEAGEGRWG*AGRLSPEALSSTGS
Trigger: GGAGCCCGTGGAGGACAGAGCCTCAGGGGAGAGGCGGCCTGCCCAGCCCCACCGGCCCTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp TGCTGTTGCGCTGGGCGGGCAGTAGGGGTGAGTCTGAACCCTGGCTaGCAGCCCGTTCGGCCAGGCGGCCCTTGGCCTCGGCGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: CCCAGRAVGVSLNPG*QPVRPGGPWPRRQR
Trigger: CCGCTGCCGCCGAGGCCAAGGGCCGCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACCCCTACTGCCCGCCCAGCGCAACAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GGTATGCTGTTGCGCTGGGCGGGCAGTAGGGGTGAGTCTGAACCCTaGCTGGCAGCCCGTTCGGCCAGGCGGCCCTTGGCCTCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: GMLLRWAGSRGESEP*LAARSARRPLASAA
Trigger: TGCCGCCGAGGCCAAGGGCCGCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACCCCTACTGCCCGCCCAGCGCAACAGCATACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GCCTTGGCGGGGAAGGGCGAGGCAGGTTCTCCTCACTTCCCAAACTaGGAAACTGACGCTCCGGGATGGCGCTCGCCGGAACCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: ALAGKGEAGSPHFPN*ETDAPGWRSPEPGP
Trigger: GGGGCCGGGTTCCGGCGAGCGCCATCCCGGAGCGTCAGTTTCCCAGTTTGGGAAGTGAGGAGAACCTGCCTCGCCCTTCCCCGCCAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315994.6
CDS TCA 90 bp AGGCCGTCTGCGGGGGCAGCTCCGAATCCTCACTCTTGGAGCCCTTaGGCCCTCCACGGAGCTGGCCTGTGGGTCTCAGCTGGCGCCGTA +
Preference number: 5 (lower is better)
Translates to: RPSAGAAPNPHSWSP*ALHGAGLWVSAGAV
Trigger: TACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGAGGATTCGGAGCTGCCCCCGCAGACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGGCCGGACCGATGGCTaGGCCCGGGGACAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRGRTDG*ARGQEV
Trigger: GACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS TCA 90 bp TGGTCTCCTCTTCCAGGGCCACATCCTCTGAAGACTCACCCACCTTaGAGCGGGCCCGCTGCAGAGAAGAGGCCGGCGAGGGCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: WSPLPGPHPLKTHPP*SGPAAEKRPARAGG
Trigger: CCCACCGGCCCTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTCAGAGGATGTGGCCCTGGAAGAGGAGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GGGGCACCTTGGGCCGGGTCAGCGTGCTTGTGCGGCGGCTCAGGTTaGGCTTCTTGCGCTTATCGATGTATGATGCGGGGGCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GAPWAGSACLCGGSG*ASCAYRCMMRGPSP
Trigger: AGGGCTGGGCCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCAAGGTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 90 bp TTGGGTGGCGGGGACACAAACACCGACTGGGGCCTGACCGCCACCTaGCGCACTCCGTTCCTCATCTTCACCGCTGGAGTGCCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: LGGGDTNTDWGLTAT*RTPFLIFTAGVPEV
Trigger: GACCTCAGGCACTCCAGCGGTGAAGATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCCGCTCCCTGCCTCTaGCTCTCTGAGCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPAPCL*LSERHW
Trigger: CCAGTGGCGCTCAGAGAGCAAGAGGCAGGGAGCGGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS TCA 90 bp GGTTGTTGTCCTTGGGTGGCGGGGACACAAACACCGACTGGGGCCTaGCCGCCACCTGCCGCACTCCGTTCCTCATCTTCACCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GCCPWVAGTQTPTGA*PPPAALRSSSSPLE
Trigger: CTCCAGCGGTGAAGATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 90 bp GGAGGAGTTCCGTCGGACGCCTCGGAGGCCATCAGTGGCCGTGAGTaGCTCATTCCTCCGCAGGGCGCAGGACAGGTTGTTGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: GGVPSDASEAISGRE*LIPPQGAGQVVVLG
Trigger: CCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCACGGCCACTGATGGCCTCCGAGGCGTCCGACGGAACTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 90 bp TGGGCCGGGTCAGCGTGCTTGTGCGGCGGCTCAGGTTGGGCTTCTTaGGCTTATCGATGTATGATGCGGGGGCCCAGCCCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: WAGSACLCGGSGWAS*AYRCMMRGPSPPSH
Trigger: GTGAGAAGGAGGGCTGGGCCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 90 bp CCGGGGACAGGAGGTCAGCCCAGCGTTCGCATCAGCATCCTTCTTTaGCCTGACCTTGGGAGTGCCGCGGATGCCTGCGTCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: PGTGGQPSVRISILL*PDLGSAADACVRSR
Trigger: TCTGCTTCGGACGCAGGCATCCGCGGCACTCCCAAGGTCAGGGCAAAGAAGGATGCTGATGCGAACGCTGGGCTGACCTCCTGTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp ATGTCATACTCAGGCTCCTCATACTTGAGCTTCCGCGGGGAGTCCTaGCTCTCACTGGCCCCCGTAGGGCCCTCCTCGGCCTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: MSYSGSSYLSFRGES*LSLAPVGPSSASLG
Trigger: GCCCAAGGAGGCCGAGGAGGGCCCTACGGGGGCCAGTGAGAGCCAGGACTCCCCGCGGAAGCTCAAGTATGAGGAGCCTGAGTATGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GCGACTCTGCTCGGTTTAGGAATGGCTTGGGCCGGACCGATGGCTTaGCCCGGGGACAGGAGGTCAGCCCAGCGTTCGCATCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: ATLLGLGMAWAGPMA*PGDRRSAQRSHQHP
Trigger: AGGATGCTGATGCGAACGCTGGGCTGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAGCAGAGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCCGGGTCAGCGTGCTaGTGCGGCGGCTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAGSAC*CGGSGW
Trigger: CCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGCTGGCGGGGGCACCTaGGGCCGGGTCAGCGTGCTT +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVAGGGT*GRVSVL
Trigger: AAGCACGCTGACCCGGCCCAAGGTGCCCCCGCCAGC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTCGTTCTGCCTGCCCTaGGCGGGCACTGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSFCLP*AGTVSS
Trigger: GCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS CCA 90 bp CCACTGGGCCGGCCAGGTTCTTCTTCCGGGTTGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGATGCTGGCGCCCAGCCCTCTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PLGRPGSSSGLAGHP*PSSGRMLAPSPLCP
Trigger: TGGGCAAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACCCGGAAGAAGAACCTGGCCGGCCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CGCGGATGCCTGCGTCCGAAGCAGAGCGGGGCTTCAGGTCGCCACTaGTTTTGGACAAGGAAGAGGAGGAGGAGGAAGAGGAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RGCLRPKQSGASGRH*FWTRKRRRRKRRSS
Trigger: GCTGCTCCTCCTCTTCCTCCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGCCCCGCTCTGCTTCGGACGCAGGCATCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CCATCTTCTCTTGGCTCTGCGACTCTGCTCGGTTTAGGAATGGCTTaGGCCGGACCGATGGCTTGGCCCGGGGACAGGAGGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PSSLGSATLLGLGMA*AGPMAWPGDRRSAQ
Trigger: CTGGGCTGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAGCAGAGTCGCAGAGCCAAGAGAAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CAGGACAGGTTGTTGTCCTTGGGTGGCGGGGACACAAACACCGACTaGGGCCTGACCGCCACCTGCCGCACTCCGTTCCTCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: QDRLLSLGGGDTNTD*GLTATCRTPFLIFT
Trigger: GGTGAAGATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCCGGGTCAGCGTGCTaGTGCGGCGGCTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAGSAC*CGGSGW
Trigger: CCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGCCGGACCGATGGCTaGGCCCGGGGACAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGRTDG*ARGQEV
Trigger: GACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGAGTGCCTGAGGTCTaGCCGAAGCCCCCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGVPEV*PKPPGG
Trigger: ACCTCCCGGGGGCTTCGGCAAGACCTCAGGCACTCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGGAGTGCCTGAGGTCTaGCCGAAGCCCCCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLGVPEV*PKPPGG
Trigger: ACCTCCCGGGGGCTTCGGCAAGACCTCAGGCACTCC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCCGCTCCCTGCCTCTaGCTCTCTGAGCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPAPCL*LSERHW
Trigger: CCAGTGGCGCTCAGAGAGCAAGAGGCAGGGAGCGGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACGGCTGTGCTGCCTGTaGACCATCCCGCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRRLCCL*TIPPRV
Trigger: GACCCTGGGCGGGATGGTCAACAGGCAGCACAGCCG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS CCA 90 bp CGTAGTGCTTGGAGGGGTTCCTCCGCTTCTCCACGTCCACCACGGTaGCATCCTGCACGCAGTAGGCGAGCATCTTCCCCCACAAAGCGA +
Preference number: 5 (lower is better)
Translates to: RSAWRGSSASPRPPR*HPARSRRASSPTKR
Trigger: TCGCTTTGTGGGGGAAGATGCTCGCCTACTGCGTGCAGGATGCCACCGTGGTGGACGTGGAGAAGCGGAGGAACCCCTCCAAGCACTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGGGCTCTGGTGGCTTaGGCAGTTGGAACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGALVA*AVGTPG
Trigger: GCCTGGGGTTCCAACTGCCAAAGCCACCAGAGCCCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTCAGGCTCCTCATACTaGAGCTTCCGCGGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRSGSSY*SFRGES
Trigger: GGACTCCCCGCGGAAGCTCAAGTATGAGGAGCCTGA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGCCAGAGGGGTCAGGTaGCTCGTTCTCATCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRARGVR*LVLIQH
Trigger: GTGCTGGATGAGAACGAGCAACCTGACCCCTCTGGC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCGCAGGACAGGTTGTaGTCCTTGGGTGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRAQDRL*SLGGGD
Trigger: GTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTAGGGCGCAGGACAGGTaGTTGTCCTTGGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLRAQDR*LSLGGG
Trigger: CCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCT...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGACCTGCTGCTCAGGGTaGCCCCTTTCCAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRTCCSG*PLSSSL
Trigger: GAGAGAGCTGGAAAGGGGCAACCCTGAGCAGCAGGT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS GCA 90 bp ATCAGCATCCTTCTTTGCCCTGACCTTGGGAGTGCCGCGGATGCCTaGGTCCGAAGCAGAGCGGGGCTTCAGGTCGCCACTGGTTTTGGA +
Preference number: 5 (lower is better)
Translates to: ISILLCPDLGSAADA*VRSRAGLQVATGFG
Trigger: TCCAAAACCAGTGGCGACCTGAAGCCCCGCTCTGCTTCGGACGCAGGCATCCGCGGCACTCCCAAGGTCAGGGCAAAGAAGGATGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 90 bp ACGCGCCTCTCGATCTTCTCCAGGCTGTCTGATTTGCCTTCGTTCTaGCTGCCCTTGGCGGGCACTGTGTCCAGCTCTTTGCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: TRLSIFSRLSDLPSF*LPLAGTVSSSLPEG
Trigger: CCCCTCTGGCAAAGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGAGAGGCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp TGCCTGCGTCCGAAGCAGAGCGGGGCTTCAGGTCGCCACTGGTTTTaGACAAGGAAGAGGAGGAGGAGGAAGAGGAGGAGCAGCAAGTGG +
Preference number: 5 (lower is better)
Translates to: CLRPKQSGASGRHWF*TRKRRRRKRRSSKW
Trigger: CCACTTGCTGCTCCTCCTCTTCCTCCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGCCCCGCTCTGCTTCGGACGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp TTGGAGCCCTTGAGCCCTCCACGGAGCTGGCCTGTGGGTCTCAGCTaGCGCCGTAAAGTGCTGATGTCCATCTTCTCTTGGCTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: LEPLSPPRSWPVGLS*RRKVLMSIFSWLCD
Trigger: GTCGCAGAGCCAAGAGAAGATGGACATCAGCACTTTACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp AGCTCCGAATCCTCACTCTTGGAGCCCTTGAGCCCTCCACGGAGCTaGCCTGTGGGTCTCAGCTGGCGCCGTAAAGTGCTGATGTCCATC +
Preference number: 5 (lower is better)
Translates to: SSESSLLEPLSPPRS*PVGLSWRRKVLMSI
Trigger: GATGGACATCAGCACTTTACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGAGGATTCGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GTCCTGGACCTTCTGGTAGGCGCTGCATGTCATGTACGAGGTGGCTaGCCCTTCCCATTCCTTCTTGGTGGGACATGGGGGAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: VLDLLVGAACHVRGG*PFPFLLGGTWGSGG
Trigger: GCCACCACTCCCCCATGTCCCACCAAGAAGGAATGGGAAGGGCCAGCCACCTCGTACATGACATGCAGCGCCTACCAGAAGGTCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CCGAGTCCTGGACCTTCTGGTAGGCGCTGCATGTCATGTACGAGGTaGCTGGCCCTTCCCATTCCTTCTTGGTGGGACATGGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PSPGPSGRRCMSCTR*LALPIPSWWDMGEW
Trigger: CCACTCCCCCATGTCCCACCAAGAAGGAATGGGAAGGGCCAGCCACCTCGTACATGACATGCAGCGCCTACCAGAAGGTCCAGGACTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTCCTGTCACGTCCTTCTaGGGCGACTCAGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLPVTSF*GDSAQL
Trigger: CAGCTGGGCTGAGTCGCCCAAGAAGGACGTGACAGG...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGTGCGGCGGCTCAGGTaGGGCTTCTTGCGCTTATCG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLVRRLR*GFLRLS
Trigger: CGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCAC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGAAGACTCACCCACCTaGAAGCGGGCCCGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVEDSPT*KRARCR
Trigger: TCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGGACGGTGTTCAGTGCTaGGACGCGCCTCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRDGVQC*DAPLDL
Trigger: AAGATCGAGAGGCGCGTCCAAGCACTGAACACCGTC...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGACACGGGTATGCTGTaGCGCTGGGCGGGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVDTGML*RWAGSR
Trigger: CCTACTGCCCGCCCAGCGCAACAGCATACCCGTGTC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGACTTCTCGATGGGCTaGGGGCGCACAGGGGACACG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVDFSMG*GRTGDT
Trigger: CGTGTCCCCTGTGCGCCCCAAGCCCATCGAGAAGTC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGGCCCAGAAGCAGGCTaGAGCTCAGAAGACACCCCC +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLGPEAG*SSEDTP
Trigger: GGGGGTGTCTTCTGAGCTCAAGCCTGCTTCTGGGCC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCAACGTGCCTCTCACTaGCCTCTAACGTGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRQRASH*PLTCSS
Trigger: GCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS TCA 90 bp GGTGTTCAGTGCTTGGACGCGCCTCTCGATCTTCTCCAGGCTGTCTaGTTTGCCTTCGTTCTGCCTGCCCTTGGCGGGCACTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: GVQCLDAPLDLLQAV*FAFVLPALGGHCVQ
Trigger: CTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGAGAGGCGCGTCCAAGCACTGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 90 bp GCCTCTCGATCTTCTCCAGGCTGTCTGATTTGCCTTCGTTCTGCCTaGCCTTGGCGGGCACTGTGTCCAGCTCTTTGCCAGAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: ASRSSPGCLICLRSA*PWRALCPALCQRGQ
Trigger: CTGACCCCTCTGGCAAAGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CCTGCTTCTTATAGTTGGACACCACCACGTACTGTTCCAGGATCATaGGCTCGGCGGTGGCGTCGGCACCTGTCACGTCCTTCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: PASYSWTPPRTVPGS*ARRWRRHLSRPSWA
Trigger: CGCCCAAGAAGGACGTGACAGGTGCCGACGCCACCGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATAAGAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GTTCCCAATGATCTCCACTGGGCCGGCCAGGTTCTTCTTCCGGGTTaGCAGGTCATCCTTGGCCTTCTTCAGGTAGGATGCTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: VPNDLHWAGQVLLPG*QVILGLLQVGCWRP
Trigger: TGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACCCGGAAGAAGAACCTGGCCGGCCCAGTGGAGATCATTGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CTCCTTCTTGGCAATGGGGGCCTCATGGCCCTCGCCTTCGGCTGGTaGAGTTTCCTTGTCCCCAGACGCCTTCTTGTTCAGCAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LLLGNGGLMALAFGW*SFLVPRRLLVQQVA
Trigger: AGCAACCTGCTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGCCAAGAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCTGTCACGTCCTTCTaGGGCGACTCAGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPVTSF*GDSAQL
Trigger: CAGCTGGGCTGAGTCGCCCAAGAAGGACGTGACAGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCTGGCGGGGGCACCTaGGGCCGGGTCAGCGTGCTT +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAGGGT*GRVSVL
Trigger: AAGCACGCTGACCCGGCCCAAGGTGCCCCCGCCAGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGAAGACTCACCCACCTaGAAGCGGGCCCGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPEDSPT*KRARCR
Trigger: TCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGGAGTGATGATGACTaGGGGGAGCCTGATTTGGGG +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRRSDDD*GEPDLG
Trigger: CCCCAAATCAGGCTCCCCCAAGTCATCATCACTCCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAGGTCGCCACTGGTTTaGGACAAGGAAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRRSPLV*DKEEEE
Trigger: CTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACGGTTTAGGAATGGCTaGGGCCGGACCGATGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRRFRNG*GRTDGL
Trigger: CAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTCACTCTTGGAGCCCTaGAGCCCTCCACGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVSLLEP*SPPRSW
Trigger: CCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCCAGAGGGGTCAGGTaGCTCGTTCTCATCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRARGVR*LVLIQH
Trigger: GTGCTGGATGAGAACGAGCAACCTGACCCCTCTGGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGGGGCGTGGCCTTCTaGCTCTGGTTGACGGTGTTC +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGGVAF*LWLTVF
Trigger: GAACACCGTCAACCAGAGCAAGAAGGCCACGCCCCC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTGCGGAAGAGGATCTaGCCTGGGAGGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLRKRI*PGRKGM
Trigger: CATCCCCTTCCTCCCAGGCAAGATCCTCTTCCGCAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAACCTGCTGCTCAGGGTaGCCCCTTTCCAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRTCCSG*PLSSSL
Trigger: GAGAGAGCTGGAAAGGGGCAACCCTGAGCAGCAGGT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS TCA 90 bp CTCCACGGAGCTGGCCTGTGGGTCTCAGCTGGCGCCGTAAAGTGCTaGTGTCCATCTTCTCTTGGCTCTGCGACTCTGCTCGGTTTAGGA +
Preference number: 5 (lower is better)
Translates to: LHGAGLWVSAGAVKC*CPSSLGSATLLGLG
Trigger: TCCTAAACCGAGCAGAGTCGCAGAGCCAAGAGAAGATGGACATCAGCACTTTACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 90 bp TCAGTGCTTGGACGCGCCTCTCGATCTTCTCCAGGCTGTCTGATTTaGCTTCGTTCTGCCTGCCCTTGGCGGGCACTGTGTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SVLGRASRSSPGCLI*LRSACPWRALCPAL
Trigger: AAGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGAGAGGCGCGTCCAAGCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp CTTCCGGGTTGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGATGCTaGCGCCCAGCCCTCTTTGCCCAGGTATCTGATATACCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LPGWQVILGLLQVGC*RPALFAQVSDIPPA
Trigger: GGCTGGTGGTATATCAGATACCTGGGCAAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACCCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GATCTCCTTCTTGGCAATGGGGGCCTCATGGCCCTCGCCTTCGGCTaGTGGAGTTTCCTTGTCCCCAGACGCCTTCTTGTTCAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: DLLLGNGGLMALAFG*WSFLVPRRLLVQQV
Trigger: AACCTGCTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGCCAAGAAGGAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGCGCCCAGCCCTCTTaGCCCAGGTATCTGATATAC +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGAQPS*PRYLIY
Trigger: GTATATCAGATACCTGGGCAAAGAGGGCTGGGCGCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGCTGGTGGAGTTTCCTaGTCCCCAGACGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVAGGVS*SPDAFL
Trigger: CAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGCTGGTGGAGTTTCCTaGTCCCCAGACGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLAGGVS*SPDAFL
Trigger: CAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTGCGTGGTGGAGGTCTaGTCCGTAGGTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPICVVEV*SVGSGS
Trigger: GCTCCCCGAACCTACGGACAAGACCTCCACCACGCA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTGGTGGCTTTGGCAGTaGGAACCCCAGGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVWWLWQ*EPQAGF
Trigger: GAATCCAGCCTGGGGTTCCAACTGCCAAAGCCACCA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTCTTTGCCCTGACCTaGGGAGTGCCGCGGATGCCT +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPFFALT*GVPRMP
Trigger: AGGCATCCGCGGCACTCCCAAGGTCAGGGCAAAGAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTCCAGGCTGTCTGATTaGCCTTCGTTCTGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSRLSD*PSFCLP
Trigger: GGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGGGGGCGTGGCCTTCTaGCTCTGGTTGACGGTGTTC +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIGGVAF*LWLTVF
Trigger: GAACACCGTCAACCAGAGCAAGAAGGCCACGCCCCC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGACTTCTCGATGGGCTaGGGGCGCACAGGGGACACG +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQDFSMG*GRTGDT
Trigger: CGTGTCCCCTGTGCGCCCCAAGCCCATCGAGAAGTC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGAAGGCACCCAGCCTTaGAAGGGCTTCACACCATCC +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLEGTQP*KGFTPS
Trigger: GGATGGTGTGAAGCCCTTCAAAGGCTGGGTGCCTTC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCCTCTTTTGGAGGGTaGACATCCTCGGGTCGAGCC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSSFGG*TSSGRA
Trigger: GGCTCGACCCGAGGATGTCAACCCTCCAAAAGAGGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGAAGCTGTGAGTCCCTaGGGACCTGCCCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLEAVSP*GPAHCQ
Trigger: TTGGCAATGGGCAGGTCCCAAGGGACTCACAGCTTC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTTTCTCTTTCACCTCTaGAGGCGCAGCCTATTGGCC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRFLFHL*RRSLLA
Trigger: GGCCAATAGGCTGCGCCTCAAGAGGTGAAAGAGAAA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS GCA 90 bp TGCCTTCGTTCTGCCTGCCCTTGGCGGGCACTGTGTCCAGCTCTTTaGCAGAGGGGTCAGGTTGCTCGTTCTCATCCAGCACCAAATAGT +
Preference number: 5 (lower is better)
Translates to: CLRSACPWRALCPAL*QRGQVARSHPAPNS
Trigger: ACTATTTGGTGCTGGATGAGAACGAGCAACCTGACCCCTCTGGCAAAGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGGTTCTTCTTCCGGGTaGGCAGGTCATCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPGSSSG*AGHPWP
Trigger: AGGCCAAGGATGACCTGCCAACCCGGAAGAAGAACC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTCCCCAGACGCCTTCTaGTTCAGCAGGTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVSPDAF*FSRLLI
Trigger: GATCAGCAACCTGCTGAACAAGAAGGCGTCTGGGGA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCCACGGCACTGCCATaGGAGGCATTGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPTALP*EALQRM
Trigger: CATCCTCTGCAATGCCTCCAATGGCAGTGCCGTGGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGTGCGGCGGCTCAGGTaGGGCTTCTTGCGCTTATCG +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQVRRLR*GFLRLS
Trigger: CGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCAC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCACTCTTGGAGCCCTaGAGCCCTCCACGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSLLEP*SPPRSW
Trigger: CCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCTTCCCATTCCTTCTaGGTGGGACATGGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPSHSF*VGHGGV
Trigger: CACTCCCCCATGTCCCACCAAGAAGGAATGGGAAGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGCCTTCTTGCTCTGGTaGACGGTGTTCAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVAFLLW*TVFSAW
Trigger: CCAAGCACTGAACACCGTCAACCAGAGCAAGAAGGC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGACAGGTTGTTGTCCTaGGGTGGCGGGGACACAAAC +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPDRLLS*GGGDTN
Trigger: GTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCTGGTATTCCCTCCATaGTCCCCAATGAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVLVFPP*SPMSPG
Trigger: GCCAGGGCTCATTGGGGACAATGGAGGGAATACCAG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCTGGTATTCCCTCCATaGTCCCCAATGAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLVFPP*SPMSPG
Trigger: GCCAGGGCTCATTGGGGACAATGGAGGGAATACCAG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTTGCACATCTTCATTTaGGAGCCTGGGATGACTGCC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRLHIFI*EPGMTA
Trigger: GGCAGTCATCCCAGGCTCCAAAATGAAGATGTGCAA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCTGGGATCAAGACCTaGGAAGGTAGGGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAGIKT*EGRALH
Trigger: GTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTGAGGCGCAGCCTATaGGCCAGGATGGAACTGGGA +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLRRSL*ARMELG
Trigger: TCCCAGTTCCATCCTGGCCAATAGGCTGCGCCTCAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS GCA 90 bp CTTCTTCCGGGTTGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGATaGTGGCGCCCAGCCCTCTTTGCCCAGGTATCTGATATACCACCA +
Preference number: 5 (lower is better)
Translates to: LLPGWQVILGLLQVG*WRPALFAQVSDIPP
Trigger: TGGTGGTATATCAGATACCTGGGCAAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACCCGGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp GTTCAGCAGGTTGCTGATCTCCATGATGTTCCCAATGATCTCCACTaGGCCGGCCAGGTTCTTCTTCCGGGTTGGCAGGTCATCCTTGGC +
Preference number: 5 (lower is better)
Translates to: VQQVADLHDVPNDLH*AGQVLLPGWQVILG
Trigger: GCCAAGGATGACCTGCCAACCCGGAAGAAGAACCTGGCCGGCCCAGTGGAGATCATTGGGAACATCATGGAGATCAGCAACCTGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACCAGTCTTAGAGGTGTaGATGTCGGAGTCATCCCGA +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRPVLEV*MSESSR
Trigger: TCGGGATGACTCCGACATCAACACCTCTAAGACTGG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAGGCTGATCTCCTTCTaGGCAATGGGGGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIRLISF*AMGASW
Trigger: CCATGAGGCCCCCATTGCCAAGAAGGAGATCAGCCT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCAGGAGTGATGATGACTaGGGGGAGCCTGATTTGGGG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVRSDDD*GEPDLG
Trigger: CCCCAAATCAGGCTCCCCCAAGTCATCATCACTCCT...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGATGTCCATCTTCTCTaGGCTCTGCGACTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVDVHLL*ALRLCS
Trigger: CGAGCAGAGTCGCAGAGCCAAGAGAAGATGGACATC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTCCTTCCCATTCCTTCTaGGTGGGACATGGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIPSHSF*VGHGGV
Trigger: CACTCCCCCATGTCCCACCAAGAAGGAATGGGAAGG...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATCGTTCTGCCTGCCCTaGGCGGGCACTGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKSFCLP*AGTVSS
Trigger: GCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGCCTTCTTGCTCTGGTaGACGGTGTTCAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPAFLLW*TVFSAW
Trigger: CCAAGCACTGAACACCGTCAACCAGAGCAAGAAGGC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTAACTCCCAGCCATCCTaGGGGCTGGATGTCACAATG +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPNSQPS*GLDVTM
Trigger: CATTGTGACATCCAGCCCCAAGGATGGCTGGGAGTT...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGAAGCTGTGAGTCCCTaGGGACCTGCCCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIEAVSP*GPAHCQ
Trigger: TTGGCAATGGGCAGGTCCCAAGGGACTCACAGCTTC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTTACTGAAGTCTGCCTaGCCCGGGAGTCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPLLKSA*PGSHFL
Trigger: CAGGAAGTGACTCCCGGGCAAGGCAGACTTCAGTAA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS CCA 90 bp ACAGGGTGTCCTCTGCATATGGCCGGAAGCCCTCATTCTCATAGATaGTCTCCTCTTCCAGGGCCACATCCTCTGAAGACTCACCCACCT +
Preference number: 5 (lower is better)
Translates to: TGCPLHMAGSPHSHR*SPLPGPHPLKTHPP
Trigger: AGGTGGGTGAGTCTTCAGAGGATGTGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGGGCTTCCGGCCATATGCAGAGGACACCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 90 bp TTGGAAGGCACCCAGCCTTTGAAGGGCTTCACACCATCCAGGATCTaGCAGTACCACCAGCCATTAGGGTTCCTCTCCAGAACCTCCATG +
Preference number: 5 (lower is better)
Translates to: LEGTQPLKGFTPSRI*QYHQPLGFLSRTSM
Trigger: CATGGAGGTTCTGGAGAGGAACCCTAATGGCTGGTGGTACTGCCAGATCCTGGATGGTGTGAAGCCCTTCAAAGGCTGGGTGCCTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAAGGCTGATCTCCTTCTaGGCAATGGGGGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQRLISF*AMGASW
Trigger: CCATGAGGCCCCCATTGCCAAGAAGGAGATCAGCCT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATGCGTGGTGGAGGTCTaGTCCGTAGGTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKCVVEV*SVGSGS
Trigger: GCTCCCCGAACCTACGGACAAGACCTCCACCACGCA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGATGTCCATCTTCTCTaGGCTCTGCGACTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIDVHLL*ALRLCS
Trigger: CGAGCAGAGTCGCAGAGCCAAGAGAAGATGGACATC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAACTGTGTCCAGCTCTTaGCCAGAGGGGTCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQTVSSS*PEGSGC
Trigger: GCAACCTGACCCCTCTGGCAAAGAGCTGGACACAGT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATCCAGGCTGTCTGATTaGCCTTCGTTCTGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQSRLSD*PSFCLP
Trigger: GGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGCGCAGGACAGGTTGTaGTCCTTGGGTGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFAQDRL*SLGGGD
Trigger: GTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAGGGCGCAGGACAGGTaGTTGTCCTTGGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFRAQDR*LSLGGG
Trigger: CCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTGGGATTTTGGAAAAGTaGTTTCCTGTCCTTGGGCCG +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVGILEK*FPVLGP
Trigger: CGGCCCAAGGACAGGAAACAACTTTTCCAAAATCCC...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTTTCCCGGAGCAGAATTaGTATGGACTCTCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVFPEQN*YGLSGC
Trigger: ACACCCAGAGAGTCCATACAAATTCTGCTCCGGGAA...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTGAGGCGCAGCCTATaGGCCAGGATGGAACTGGGA +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQLRRSL*ARMELG
Trigger: TCCCAGTTCCATCCTGGCCAATAGGCTGCGCCTCAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGAACTCAAAGATTGGTTaGTGGCTGGTGACTTCTCTC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRNSKIG*WLVTSL
Trigger: GAGAGAAGTCACCAGCCACAAACCAATCTTTGAGTT...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCAGAGACATCCACCAGTCCCCACCCAGCCATGCAGTCCACATGCTCACGCTTGAGACTGGCTTTGGATaGGACAGTCAAAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SRDIHQSPPSHAVHMLTLETGFG*DSQREV
Trigger: CACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTC...AAGCGTGAGCATGTGGACTGCATGGCTGGGTGGGGACTGGTGGATGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGCTGCAGGCTTGTGGGAATTGGTGTCTCACCAGGGTGTGCGCGGCTCAAGGTTCTTGAGAGACTGGCTTaGGATTGGACAGTCAAAGGG +
Preference number: 5 (lower is better)
Translates to: CCRLVGIGVSPGCARLKVLERLA*DWTVKG
Trigger: CCCTTTGACTGTCCAATCCAAAGCCAGTCTCTCAAG...AACCTTGAGCCGCGCACACCCTGGTGAGACACCAATTCCCACAAGCCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTAGACGACAAAGGAGGTaGCCTTCCTCCCAGATGTGC +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIRRQRR*PSSQMC
Trigger: GCACATCTGGGAGGAAGGCAACCTCCTTTGTCGTCT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTACTGAAGTCTGCCTaGCCCGGGAGTCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPILLKSA*PGSHFL
Trigger: CAGGAAGTGACTCCCGGGCAAGGCAGACTTCAGTAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTGGGCCTTGCGTCTCTaGGACACTTCTCCAGTCTTA +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPWALRL*DTSPVL
Trigger: TAAGACTGGAGAAGTGTCCAAGAGACGCAAGGCCCA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCTATGAAAGATGGTCTTaGCTGGCACCTGGGAACTGC +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVYERWS*LAPGNC
Trigger: GCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCATA...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCGGGATTTTGGAAAAGTaGTTTCCTGTCCTTGGGCCG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVGILEK*FPVLGP
Trigger: CGGCCCAAGGACAGGAAACAACTTTTCCAAAATCCC...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCCCTGGCATCCATCTaGGTAATATTGCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRALASI*VILHFS
Trigger: GGAAAAGTGCAATATTACCAAGATGGATGCCAGGGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGCCAGAGAGCTCTGCTTaGAGATTCTCAAAGACTAAA +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRPESSA*RFSKTK
Trigger: TTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTGG...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTGAGACTGGCTTTGGATaGGACAGTCAAAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPETGFG*DSQREV
Trigger: CACTTCCCTTTGACTGTCCAATCCAAAGCCAGTCTC...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGACTACTGTATGACCCATaGTGGTCACTGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRLLYDP*WSLLFE
Trigger: CTCAAAGAGCAGTGACCACAATGGGTCATACAGTAG...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCAGTCTTAGAGGTGTaGATGTCGGAGTCATCCCGA +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPVLEV*MSESSR
Trigger: TCGGGATGACTCCGACATCAACACCTCTAAGACTGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGGTTCTTCTTCCGGGTaGGCAGGTCATCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKGSSSG*AGHPWP
Trigger: AGGCCAAGGATGACCTGCCAACCCGGAAGAAGAACC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGGGCTCTGGTGGCTTaGGCAGTTGGAACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGALVA*AVGTPG
Trigger: GCCTGGGGTTCCAACTGCCAAAGCCACCAGAGCCCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCAGGCTCCTCATACTaGAGCTTCCGCGGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSGSSY*SFRGES
Trigger: GGACTCCCCGCGGAAGCTCAAGTATGAGGAGCCTGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCATTCTTCTCTGCCTaGAGCTTTAGGAGTGATGAT +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRAFFSA*SFRSDD
Trigger: ATCATCACTCCTAAAGCTCAAGGCAGAGAAGAATGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGACACGGGTATGCTGTaGCGCTGGGCGGGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIDTGML*RWAGSR
Trigger: CCTACTGCCCGCCCAGCGCAACAGCATACCCGTGTC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCTGCGGAAGAGGATCTaGCCTGGGAGGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFLRKRI*PGRKGM
Trigger: CATCCCCTTCCTCCCAGGCAAGATCCTCTTCCGCAG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTGGCATGCACCCTTCTaGCTTCAAGTATTAATATTC +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRWHAPF*LQVLIF
Trigger: GAATATTAATACTTGAAGCAAGAAGGGTGCATGCCA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCAGGCTTGTGGGAATaGGTGTCTCACCAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAGLWE*VSHQGV
Trigger: CACACCCTGGTGAGACACCAATTCCCACAAGCCTGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTCCAGATTGGTACCTGTaGTGGGAAGTTTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPPDWYL*WEVLSA
Trigger: TGCAGACAAAACTTCCCACAACAGGTACCAATCTGG...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTTCCCAGGAAGTGTTaGGTCTGGCCCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLPRKC*VWPCSW
Trigger: CCAACTGCAGGGCCAGACCAAACACTTCCTGGGAAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCTGGGATCAAGACCTaGGAAGGTAGGGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAGIKT*EGRALH
Trigger: GTGGAGAGCCCTACCTTCCAAGGTCTTGATCCCAGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACAACGTGCCTCTCACTaGCCTCTAACGTGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKQRASH*PLTCSS
Trigger: GCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAGCTATGGCTGGACCCTaGGGTGTTAAATCACTAAAT +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRAMAGP*GVKSLN
Trigger: ATTTAGTGATTTAACACCCAAGGGTCCAGCCATAGC...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATTTCTGTGGCCAAATTaGGAGGATTTTCCAACCTGC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRFLWPN*EDFPTC
Trigger: GCAGGTTGGAAAATCCTCCAAATTTGGCCACAGAAA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGAAGGTGTCAGAGATACTaGAGAATGACTGGTACCAAC +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRRCQRY*RMTGTN
Trigger: GTTGGTACCAGTCATTCTCAAGTATCTCTGACACCT...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS TCA 90 bp TCTGCGATAGAGACGTACACATCTTTGAGGTTATTGTGGATGAACTaGGACTTCTCGATGGGCTTGGGGCGCACAGGGGACACGGGTATG +
Preference number: 5 (lower is better)
Translates to: SAIETYTSLRLLWMN*DFSMGLGRTGDTGM
Trigger: CATACCCGTGTCCCCTGTGCGCCCCAAGCCCATCGAGAAGTCTCAGTTCATCCACAATAACCTCAAAGATGTGTACGTCTCTATCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGAGCAGCAAGTGGTGTaGATGGTGATGGATGAGGAA +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQEQQVV*MVMDEE
Trigger: TTCCTCATCCATCACCATCAACACCACTTGCTGCTC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAGGTCGCCACTGGTTTaGGACAAGGAAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKRSPLV*DKEEEE
Trigger: CTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGAAGGCACCCAGCCTTaGAAGGGCTTCACACCATCC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFEGTQP*KGFTPS
Trigger: GGATGGTGTGAAGCCCTTCAAAGGCTGGGTGCCTTC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCCCGTCTACAGTCATaGGACATAGGGGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKARLQS*DIGETH
Trigger: GTGGGTTTCCCCTATGTCCAATGACTGTAGACGGGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GCAGCCTATTGGCCAGGATGGAACTGGGAGCAAGGCGGGGACCTTCAGTGCAGGTTCCTGTCTCTCAGATaGTTTCCATTTTTGATTGAG +
Preference number: 5 (lower is better)
Translates to: AAYWPGWNWEQGGDLQCRFLSLR*FPFLIE
Trigger: CTCAATCAAAAATGGAAACAATCTGAGAGACAGGAA...CCTGCACTGAAGGTCCCCGCCTTGCTCCCAGTTCCATCCTGGCCAATAGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGCAGGCTTGTGGGAATaGGTGTCTCACCAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFAGLWE*VSHQGV
Trigger: CACACCCTGGTGAGACACCAATTCCCACAAGCCTGC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCCTGTCCTTGGGCCGCAGTAACAGGAAGGGATGGGATAGAGACCTCTGAGGTCCCAGTGGCATCTCTTTaGCACATCTTCATTTTGGAG +
Preference number: 5 (lower is better)
Translates to: SCPWAAVTGRDGIETSEVPVASL*HIFILE
Trigger: CTCCAAAATGAAGATGTGCAAAAGAGATGCCACTGG...GACCTCAGAGGTCTCTATCCCATCCCTTCCTGTTACTGCGGCCCAAGGACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGGTCTGGCCCTGCAGTaGGGACTAAACTTATATGCA +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQGLALQ*GLNLYA
Trigger: TGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAATTGGGGAAGGGGGATaGCATGCTAATCCCAACCTT +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQIGEGG*HANPNL
Trigger: AAGGTTGGGATTAGCATGCAATCCCCCTTCCCCAAT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAGACGACAAAGGAGGTaGCCTTCCTCCCAGATGTGC +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKRRQRR*PSSQMC
Trigger: GCACATCTGGGAGGAAGGCAACCTCCTTTGTCGTCT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTCCCCAGACGCCTTCTaGTTCAGCAGGTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFSPDAF*FSRLLI
Trigger: GATCAGCAACCTGCTGAACAAGAAGGCGTCTGGGGA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCGGTTTAGGAATGGCTaGGGCCGGACCGATGGCTTG +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIRFRNG*GRTDGL
Trigger: CAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAATGGCATGTAATCCATaGGTGAAGTCCCTATGGTGC +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQMACNP*VKSLWC
Trigger: GCACCATAGGGACTTCACCAATGGATTACATGCCAT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GGCTCTCGGGAGCACTGTGGTCCAGTCCAACTGAGATGCTCTGTGCTTGGCAGATCCATCTTGGTAATATaGCACTTTTCCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GSREHCGPVQLRCSVLGRSILVI*HFSCLS
Trigger: TGAGAGACAGGAAAAGTGCAATATTACCAAGATGGA...TCTGCCAAGCACAGAGCATCTCAGTTGGACTGGACCACAGTGCTCCCGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGCCCTGGCATCCATCTaGGTAATATTGCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQALASI*VILHFS
Trigger: GGAAAAGTGCAATATTACCAAGATGGATGCCAGGGC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAACCAGATTGGTACCTGTaGTGGGAAGTTTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQPDWYL*WEVLSA
Trigger: TGCAGACAAAACTTCCCACAACAGGTACCAATCTGG...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAAGGAAGGAGGCCAGATaGGTACCTGTTGTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKRKEAR*VPVVGS
Trigger: ACTTCCCACAACAGGTACCAATCTGGCCTCCTTCCT...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTATCAATGACCATTCATaGAGAACTGATGGGGACCCA +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIINDHS*RTDGDP
Trigger: TGGGTCCCCATCAGTTCTCAATGAATGGTCATTGAT...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAAACTCTGGTTCTAATTaGTGGAGGTGGGTCCCTACT +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQNSGSN*WRWVPT
Trigger: AGTAGGGACCCACCTCCACAAATTAGAACCAGAGTT...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATATGGGGAGTGTGCCTaGGTTATAAGGCAACGCAAA +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQYGECA*VIRQRK
Trigger: TTTGCGTTGCCTTATAACCAAGGCACACTCCCCATA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS CCA 90 bp GATGAGGAAAAGGAGGCTGAGGAGTGGTTCTTCCCCATTTCTGCCTaGGCATTCTTCTCTGCCTTGAGCTTTAGGAGTGATGATGACTTG +
Preference number: 5 (lower is better)
Translates to: DEEKEAEEWFFPISA*AFFSALSFRSDDDL
Trigger: CAAGTCATCATCACTCCTAAAGCTCAAGGCAGAGAAGAATGCCCAGGCAGAAATGGGGAAGAACCACTCCTCAGCCTCCTTTTCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGGCGCCCAGCCCTCTTaGCCCAGGTATCTGATATAC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIGAQPS*PRYLIY
Trigger: GTATATCAGATACCTGGGCAAAGAGGGCTGGGCGCC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGATTCTTTGCCCTGACCTaGGGAGTGCCGCGGATGCCT +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGFFALT*GVPRMP
Trigger: AGGCATCCGCGGCACTCCCAAGGTCAGGGCAAAGAA...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTGAGACGTACACATCTTaGAGGTTATTGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIETYTS*RLLWMN
Trigger: GTTCATCCACAATAACCTCAAAGATGTGTACGTCTC...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTCCTCTTTTGGAGGGTaGACATCCTCGGGTCGAGCC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEISSFGG*TSSGRA
Trigger: GGCTCGACCCGAGGATGTCAACCCTCCAAAAGAGGA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp GAAGGTCTAGCACAGCCCTCCACACACTTCCCAGGAAGTGTTTGGTCTGGCCCTTGGCATGCACCCTTCTaGCTTCAAGTATTAATATTC +
Preference number: 5 (lower is better)
Translates to: EGLAQPSTHFPGSVWSGPWHAPF*LQVLIF
Trigger: GAATATTAATACTTGAAGCAAGAAGGGTGCATGCCA...AGGGCCAGACCAAACACTTCCTGGGAAGTGTGTGGAGGGCTGTGCTAGACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATTCCCGGAGCAGAATTaGTATGGACTCTCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKFPEQN*YGLSGC
Trigger: ACACCCAGAGAGTCCATACAAATTCTGCTCCGGGAA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTAGGAAGGAGGCCAGATaGGTACCTGTTGTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFRKEAR*VPVVGS
Trigger: ACTTCCCACAACAGGTACCAATCTGGCCTCCTTCCT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTTCCCAGGAAGTGTTaGGTCTGGCCCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILPRKC*VWPCSW
Trigger: CCAACTGCAGGGCCAGACCAAACACTTCCTGGGAAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTTTCTCTTTCACCTCTaGAGGCGCAGCCTATTGGCC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFFLFHL*RRSLLA
Trigger: GGCCAATAGGCTGCGCCTCAAGAGGTGAAAGAGAAA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAAGCTATGGCTGGACCCTaGGGTGTTAAATCACTAAAT +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQAMAGP*GVKSLN
Trigger: ATTTAGTGATTTAACACCCAAGGGTCCAGCCATAGC...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TCTGCCTGCTGCCGGCAGTATCCTTCAGCATCACAAAGCAGCTCAGTAGCTCAATTTCTGTGGCCAAATTaGGAGGATTTTCCAACCTGC +
Preference number: 5 (lower is better)
Translates to: SACCRQYPSASQSSSVAQFLWPN*EDFPTC
Trigger: GCAGGTTGGAAAATCCTCCAAATTTGGCCACAGAAA...TTGAGCTACTGAGCTGCTTTGTGATGCTGAAGGATACTGCCGGCAGCAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGACGCCGCAGATGGGCCTaGCGTCTCTTGGACACTTCT +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGRRRWA*RLLDTS
Trigger: AGAAGTGTCCAAGAGACGCAAGGCCCATCTGCGGCG...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACTCAGGTTGGGCTTCTaGCGCTTATCGATGTATGAT +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKLRLGF*RLSMYD
Trigger: ATCATACATCGATAAGCGCAAGAAGCCCAACCTGAG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGAGCAGCAAGTGGTGTaGATGGTGATGGATGAGGAA +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFEQQVV*MVMDEE
Trigger: TTCCTCATCCATCACCATCAACACCACTTGCTGCTC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAACTGTGTCCAGCTCTTaGCCAGAGGGGTCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGTVSSS*PEGSGC
Trigger: GCAACCTGACCCCTCTGGCAAAGAGCTGGACACAGT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGACGGTGTTCAGTGCTaGGACGCGCCTCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGDGVQC*DAPLDL
Trigger: AAGATCGAGAGGCGCGTCCAAGCACTGAACACCGTC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGACAGGTTGTTGTCCTaGGGTGGCGGGGACACAAAC +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGDRLLS*GGGDTN
Trigger: GTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTGATATCTCAGCTTTCTaGGCTCTGGGTCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIDISAF*ALGPRP
Trigger: AGGCCTGGGACCCAGAGCCAAGAAAGCTGAGATATC...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTTATGAAAGATGGTCTTaGCTGGCACCTGGGAACTGC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFYERWS*LAPGNC
Trigger: GCAGTTCCCAGGTGCCAGCAAAGACCATCTTTCATA...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAACATGGGAAACTAGGTTaGGACACTGCGGAGATTTTG +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKHGKLG*DTAEIL
Trigger: CAAAATCTCCGCAGTGTCCAAACCTAGTTTCCCATG...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGGTCTGGCCCTGCAGTaGGGACTAAACTTATATGCA +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFGLALQ*GLNLYA
Trigger: TGCATATAAGTTTAGTCCCAACTGCAGGGCCAGACC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAATATGGGGAGTGTGCCTaGGTTATAAGGCAACGCAAA +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKYGECA*VIRQRK
Trigger: TTTGCGTTGCCTTATAACCAAGGCACACTCCCCATA...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAATCTCGTCCTTGCTTaGGCTGGTGTAAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEINLVLA*AGVRLH
Trigger: GTGCAGCCTTACACCAGCCAAAGCAAGGACGAGATT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CCAACGTGCCTCTCACTTGCCTCTAACGTGCTCGAGCCATCCTTTTGTTCTAAAGCATTCTTCTCTGCCTaGAGCTTTAGGAGTGATGAT +
Preference number: 5 (lower is better)
Translates to: PTCLSLASNVLEPSFCSKAFFSA*SFRSDD
Trigger: ATCATCACTCCTAAAGCTCAAGGCAGAGAAGAATGC...TTTAGAACAAAAGGATGGCTCGAGCACGTTAGAGGCAAGTGAGAGGCACGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAGATATCTCAGCTTTCTaGGCTCTGGGTCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGDISAF*ALGPRP
Trigger: AGGCCTGGGACCCAGAGCCAAGAAAGCTGAGATATC...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TACCTTCCAGCTGTGGGATGGCTTGGACAGGGGGCATCTTTGAGGTCACCCATTTTCCTGTCTCTCAGATaGTTTCCATTTTTGATTGAG +
Preference number: 5 (lower is better)
Translates to: YLPAVGWLGQGASLRSPIFLSLR*FPFLIE
Trigger: CTCAATCAAAAATGGAAACAATCTGAGAGACAGGAA...AATGGGTGACCTCAAAGATGCCCCCTGTCCAAGCCATCCCACAGCTGGAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTTTGCACATCTTCATTTaGGAGCCTGGGATGACTGCC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILHIFI*EPGMTA
Trigger: GGCAGTCATCCCAGGCTCCAAAATGAAGATGTGCAA...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCAGTGGCATCTCTTTaGCACATCTTCATTTTGGAG +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPVASL*HIFILE
Trigger: CTCCAAAATGAAGATGTGCAAAAGAGATGCCACTGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTATCAATGACCATTCATaGAGAACTGATGGGGACCCA +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFINDHS*RTDGDP
Trigger: TGGGTCCCCATCAGTTCTCAATGAATGGTCATTGAT...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTCTCAGGTTGGGCTTCTaGCGCTTATCGATGTATGAT +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEILRLGF*RLSMYD
Trigger: ATCATACATCGATAAGCGCAAGAAGCCCAACCTGAG...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTGAGACGTACACATCTTaGAGGTTATTGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFETYTS*RLLWMN
Trigger: GTTCATCCACAATAACCTCAAAGATGTGTACGTCTC...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTATGGCATGTAATCCATaGGTGAAGTCCCTATGGTGC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIMACNP*VKSLWC
Trigger: GCACCATAGGGACTTCACCAATGGATTACATGCCAT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TGTTCACTGCCCAAATCTACATGCTGTCACCAGATGGCAGCATTCCCCACTTTTCCAGAGAGCTCTGCTTaGAGATTCTCAAAGACTAAA +
Preference number: 5 (lower is better)
Translates to: CSLPKSTCCHQMAAFPTFPESSA*RFSKTK
Trigger: TTTAGTCTTTGAGAATCTCAAAGCAGAGCTCTCTGG...AAAAGTGGGGAATGCTGCCATCTGGTGACAGCATGTAGATTTGGGCAGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAACTCAAAGATTGGTTaGTGGCTGGTGACTTCTCTC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEINSKIG*WLVTSL
Trigger: GAGAGAAGTCACCAGCCACAAACCAATCTTTGAGTT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp TTCACATTTTCAGTCGCAACTCATGGGAAACTAGGTTTGGACACTGCGGAGATTAGGTGTCAGAGATACTaGAGAATGACTGGTACCAAC +
Preference number: 5 (lower is better)
Translates to: FTFSVATHGKLGLDTAEIRCQRY*RMTGTN
Trigger: GTTGGTACCAGTCATTCTCAAGTATCTCTGACACCT...AATCTCCGCAGTGTCCAAACCTAGTTTCCCATGAGTTGCGACTGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS-3UTR CAA 90 bp CTTTCAGTCCTGCATTTTAATGACTCTATTACTTACAGCACTGGGGGTCAAGGAATATTCTCTTTGGGTTaGCAGGGTTTGTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LSVLHFNDSITYSTGGQGIFSLG*QGLCCE
Trigger: CTCACAGCACAAACCCTGCAAACCCAAAGAGAATAT...TCCTTGACCCCCAGTGCTGTAAGTAATAGAGTCATTAAAATGCAGGACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS CCA 72 bp CGCTGCAGAGAAGAGGCCGGCGAGGGCCGGTGGGGCTaGGCAGGCCGCCTCTCCCCTGAGGCTCTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: RCREEAGEGRWG*AGRLSPEALSS
Trigger: GGAGGACAGAGCCTCAGGGGAGAGGCGGCCTGCCCAGCCCCACCGGCCCTCGCCGGCCTCTTCTCTGCAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GCTGGGCGGGCAGTAGGGGTGAGTCTGAACCCTGGCTaGCAGCCCGTTCGGCCAGGCGGCCCTTGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: AGRAVGVSLNPG*QPVRPGGPWPR
Trigger: CCGAGGCCAAGGGCCGCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACCCCTACTGCCCGCCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp TTGCGCTGGGCGGGCAGTAGGGGTGAGTCTGAACCCTaGCTGGCAGCCCGTTCGGCCAGGCGGCCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LRWAGSRGESEP*LAARSARRPLA
Trigger: GGCCAAGGGCCGCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACCCCTACTGCCCGCCCAGCGCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GAGGCCGTCTGCGGGGGCAGCTCCGAATCCTCACTCTTGGAGCCCTaGAGCCCTCCACGGAGCTGGCCTGTGGGTCTCAGCTGGCGCCGT +
Preference number: 6 (lower is better)
Translates to: EAVCGGSSESSLLEP*SPPRSWPVGLSWRR
Trigger: ACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGAGGATTCGGAGCTGCCCCCGCAGACGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GGAGCCTCGGAGGCCGTCTGCGGGGGCAGCTCCGAATCCTCACTCTaGGAGCCCTTGAGCCCTCCACGGAGCTGGCCTGTGGGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: GASEAVCGGSSESSL*EPLSPPRSWPVGLS
Trigger: GCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGAGGATTCGGAGCTGCCCCCGCAGACGGCCTCCGAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GGTGAGTCTGAACCCTGGCTGGCAGCCCGTTCGGCCAGGCGGCCCTaGGCCTCGGCGGCAGCGGAGCGAGCAGTGCTAAAGGAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GESEPWLAARSARRP*ASAAAERAVLKEEF
Trigger: GAACTCCTCCTTTAGCACTGCTCGCTCCGCTGCCGCCGAGGCCAAGGGCCGCCTGGCCGAACGGGCTGCCAGCCAGGGTTCAGACTCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp TCCTCTGAAGACTCACCCACCTTGAAGCGGGCCCGCTaGAGAGAAGAGGCCGGCGAGGGCCGGTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSEDSPTLKRAR*REEAGEGRWGW
Trigger: CCAGCCCCACCGGCCCTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTCAGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GGGGGCACCTTGGGCCGGGTCAGCGTGCTTGTGCGGCGGCTCAGGTaGGGCTTCTTGCGCTTATCGATGTATGATGCGGGGGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GGTLGRVSVLVRRLR*GFLRLSMYDAGAQP
Trigger: GGGCTGGGCCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCAAGGTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp GCCTGGGGAGTCGCTGTCCCCGGAGGAGCCTCTGGCTaGCAGGGTGTCCTCTGCATATGGCCGGAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: AWGVAVPGGASG*QGVLCIWPEAL
Trigger: GAGGGCTTCCGGCCATATGCAGAGGACACCCTGTCAGCCAGAGGCTCCTCCGGGGACAGCGACTCCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp CTGGCGGGGGCACCTTGGGCCGGGTCAGCGTGCTTGTaGGGCGGCTCAGGTTGGGCTTCTTGCGCTTATCGA +
Preference number: 6 (lower is better)
Translates to: LAGAPWAGSACL*GGSGWASCAYR
Trigger: TCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCAAGGTGCCCCCGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CCTCACTTCCCAAACTGGGAAACTGACGCTCCGGGATaGCGCTCGCCGGAACCCGGCCCCTACCCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: PHFPNWETDAPG*RSPEPGPYPAL
Trigger: CAGCGCTGGGTAGGGGCCGGGTTCCGGCGAGCGCCATCCCGGAGCGTCAGTTTCCCAGTTTGGGAAGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315994.6
CDS CCA 72 bp GCTCGGCGGTGGCGTCGGCACCTGTCACGTCCTTCTTaGGCGACTCAGCCCAGCTGGACAGCCACACTGTGG +
Preference number: 6 (lower is better)
Translates to: ARRWRRHLSRPS*ATQPSWTATLW
Trigger: CCACAGTGTGGCTGTCCAGCTGGGCTGAGTCGCCCAAGAAGGACGTGACAGGTGCCGACGCCACCGCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315994.6
CDS CCA 72 bp TCAGGCTCCTCATACTTGAGCTTCCGCGGGGAGTCCTaGCTCTCACTGGCCCCCGTAGGGCCCTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SGSSYLSFRGES*LSLAPVGPSSA
Trigger: GGCCGAGGAGGGCCCTACGGGGGCCAGTGAGAGCCAGGACTCCCCGCGGAAGCTCAAGTATGAGGAGCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CCTCCGCAGGGCGCAGGACAGGTTGTTGTCCTTGGGTaGCGGGGACACAAACACCGACTGGGGCCTGACCGC +
Preference number: 6 (lower is better)
Translates to: PPQGAGQVVVLG*RGHKHRLGPDR
Trigger: GCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp GTGCTGGCGGGGGCACCTTGGGCCGGGTCAGCGTGCTaGTGCGGCGGCTCAGGTTGGGCTTCTTGCGCTTAT +
Preference number: 6 (lower is better)
Translates to: VLAGAPWAGSAC*CGGSGWASCAY
Trigger: ATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCAAGGTGCCCCCGCCAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp CTTGTCCGTAGGTTCGGGGAGCTGATCTGGGCCCGCTaGGGGGCAATCCTGGCCACAGCTGGAGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LVRRFGELIWAR*GAILATAGEPW
Trigger: CCAGGGCTCTCCAGCTGTGGCCAGGATTGCCCCTCAGCGGGCCCAGATCAGCTCCCCGAACCTACGGACAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TGCGGGGGCAGCTCCGAATCCTCACTCTTGGAGCCCTaGAGCCCTCCACGGAGCTGGCCTGTGGGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: CGGSSESSLLEP*SPPRSWPVGLS
Trigger: GCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGAGGATTCGGAGCTGCCCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp ATGGTCTCCTCTTCCAGGGCCACATCCTCTGAAGACTCACCCACCTaGAAGCGGGCCCGCTGCAGAGAAGAGGCCGGCGAGGGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: MVSSSRATSSEDSPT*KRARCREEAGEGRW
Trigger: CCACCGGCCCTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTCAGAGGATGTGGCCCTGGAAGAGGAGACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp CCTTGGGTGGCGGGGACACAAACACCGACTGGGGCCTaGCCGCCACCTGCCGCACTCCGTTCCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: PWVAGTQTPTGA*PPPAALRSSSS
Trigger: TGAAGATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp CCGTCGGACGCCTCGGAGGCCATCAGTGGCCGTGAGTaGCTCATTCCTCCGCAGGGCGCAGGACAGGTTGTT +
Preference number: 6 (lower is better)
Translates to: PSDASEAISGRE*LIPPQGAGQVV
Trigger: AACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCACGGCCACTGATGGCCTCCGAGGCGTCCGACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp AGTTCCGTCGGACGCCTCGGAGGCCATCAGTGGCCGTaGGTGACTCATTCCTCCGCAGGGCGCAGGACAGGT +
Preference number: 6 (lower is better)
Translates to: SSVGRLGGHQWP*VTHSSAGRRTG
Trigger: ACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCACGGCCACTGATGGCCTCCGAGGCGTCCGACGGAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp CTTCTTTGCCCTGACCTTGGGAGTGCCGCGGATGCCTaGGTCCGAAGCAGAGCGGGGCTTCAGGTCGCCACT +
Preference number: 6 (lower is better)
Translates to: LLCPDLGSAADA*VRSRAGLQVAT
Trigger: AGTGGCGACCTGAAGCCCCGCTCTGCTTCGGACGCAGGCATCCGCGGCACTCCCAAGGTCAGGGCAAAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp CCTGCCGCACTCCGTTCCTCATCTTCACCGCTGGAGTaGCTGAGGTCTTGCCGAAGCCCCCGGGAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: PAALRSSSSPLE*LRSCRSPREVW
Trigger: CCAAACCTCCCGGGGGCTTCGGCAAGACCTCAGGCACTCCAGCGGTGAAGATGAGGAACGGAGTGCGGCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp GGGGACACAAACACCGACTGGGGCCTGACCGCCACCTaGCGCACTCCGTTCCTCATCTTCACCGCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: GDTNTDWGLTAT*RTPFLIFTAGV
Trigger: CACTCCAGCGGTGAAGATGAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CTCGGTTTAGGAATGGCTTGGGCCGGACCGATGGCTTaGCCCGGGGACAGGAGGTCAGCCCAGCGTTCGCAT +
Preference number: 6 (lower is better)
Translates to: LGLGMAWAGPMA*PGDRRSAQRSH
Trigger: ATGCGAACGCTGGGCTGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CTTGGCTCTGCGACTCTGCTCGGTTTAGGAATGGCTTaGGCCGGACCGATGGCTTGGCCCGGGGACAGGAGG +
Preference number: 6 (lower is better)
Translates to: LGSATLLGLGMA*AGPMAWPGDRR
Trigger: CCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAGCAGAGTCGCAGAGCCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp TTGTTGTCCTTGGGTGGCGGGGACACAAACACCGACTaGGGCCTGACCGCCACCTGCCGCACTCCGTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLSLGGGDTNTD*GLTATCRTPFL
Trigger: GAGGAACGGAGTGCGGCAGGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp TGGAGGGGTTCCTCCGCTTCTCCACGTCCACCACGGTaGCATCCTGCACGCAGTAGGCGAGCATCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: WRGSSASPRPPR*HPARSRRASSP
Trigger: GGGGGAAGATGCTCGCCTACTGCGTGCAGGATGCCACCGTGGTGGACGTGGAGAAGCGGAGGAACCCCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355946.6
ENST00000369774.8
CDS CCA 72 bp GCTCGGCGGTGGCGTCGGCACCTGTCACGTCCTTCTTaGGCGACTCAGCCCAGCTGGACAGCCACACTGATT +
Preference number: 6 (lower is better)
Translates to: ARRWRRHLSRPS*ATQPSWTATLI
Trigger: AATCAGTGTGGCTGTCCAGCTGGGCTGAGTCGCCCAAGAAGGACGTGACAGGTGCCGACGCCACCGCCGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp CCGTTCCTCATCTTCACCGCTGGAGTGCCTGAGGTCTaGCCGAAGCCCCCGGGAGGTTTGGAGGGGATGGGG +
Preference number: 6 (lower is better)
Translates to: PFLIFTAGVPEV*PKPPGGLEGMG
Trigger: CCCCATCCCCTCCAAACCTCCCGGGGGCTTCGGCAAGACCTCAGGCACTCCAGCGGTGAAGATGAGGAACGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp TGCGACTCTGCTCGGTTTAGGAATGGCTTGGGCCGGACCGATGGCTaGGCCCGGGGACAGGAGGTCAGCCCAGCGTTCGCATCAGCATCC +
Preference number: 6 (lower is better)
Translates to: CDSARFRNGLGRTDG*ARGQEVSPAFASAS
Trigger: GGATGCTGATGCGAACGCTGGGCTGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAGCAGAGTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GTGAGTGACTCATTCCTCCGCAGGGCGCAGGACAGGTTGTTGTCCTaGGGTGGCGGGGACACAAACACCGACTGGGGCCTGACCGCCACC +
Preference number: 6 (lower is better)
Translates to: VSDSFLRRAQDRLLS*GGGDTNTDWGLTAT
Trigger: GGTGGCGGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GTGGCCGTGAGTGACTCATTCCTCCGCAGGGCGCAGGACAGGTTGTaGTCCTTGGGTGGCGGGGACACAAACACCGACTGGGGCCTGACC +
Preference number: 6 (lower is better)
Translates to: VAVSDSFLRRAQDRL*SLGGGDTNTDWGLT
Trigger: GGTCAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCACGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp GGAGGTCAGCCCAGCGTTCGCATCAGCATCCTTCTTTaGCCTGACCTTGGGAGTGCCGCGGATGCCTGCGTC +
Preference number: 6 (lower is better)
Translates to: GGQPSVRISILL*PDLGSAADACV
Trigger: GACGCAGGCATCCGCGGCACTCCCAAGGTCAGGGCAAAGAAGGATGCTGATGCGAACGCTGGGCTGACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GGGAAGGGCGAGGCAGGTTCTCCTCACTTCCCAAACTaGGAAACTGACGCTCCGGGATGGCGCTCGCCGGAA +
Preference number: 6 (lower is better)
Translates to: GKGEAGSPHFPN*ETDAPGWRSPE
Trigger: TTCCGGCGAGCGCCATCCCGGAGCGTCAGTTTCCCAGTTTGGGAAGTGAGGAGAACCTGCCTCGCCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315994.6
CDS CCA 72 bp TGGGCCGGGTCAGCGTGCTTGTGCGGCGGCTCAGGTTaGGCTTCTTGCGCTTATCGATGTATGATGCGGGGG +
Preference number: 6 (lower is better)
Translates to: WAGSACLCGGSG*ASCAYRCMMRG
Trigger: CCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp TCCTCACTCTTGGAGCCCTTGAGCCCTCCACGGAGCTaGCCTGTGGGTCTCAGCTGGCGCCGTAAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSLLEPLSPPRS*PVGLSWRRKVL
Trigger: CAGCACTTTACGGCGCCAGCTGAGACCCACAGGCCAGCTCCGTGGAGGGCTCAAGGGCTCCAAGAGTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp GTCAGCGTGCTTGTGCGGCGGCTCAGGTTGGGCTTCTaGCGCTTATCGATGTATGATGCGGGGGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: VSVLVRRLRLGF*RLSMYDAGAQP
Trigger: GGGCTGGGCCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TCTTCCAGGGCCACATCCTCTGAAGACTCACCCACCTaGAAGCGGGCCCGCTGCAGAGAAGAGGCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: SSRATSSEDSPT*KRARCREEAGE
Trigger: CTCGCCGGCCTCTTCTCTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTCAGAGGATGTGGCCCTGGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TCTTGGCTCTGCGACTCTGCTCGGTTTAGGAATGGCTaGGGCCGGACCGATGGCTTGGCCCGGGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: SWLCDSARFRNG*GRTDGLARGQE
Trigger: CTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAGCAGAGTCGCAGAGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TCATTCCTCCGCAGGGCGCAGGACAGGTTGTTGTCCTaGGGTGGCGGGGACACAAACACCGACTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: SFLRRAQDRLLS*GGGDTNTDWGL
Trigger: CAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp ACGGTGACATACTTCTCCTCTCGGCTGTGCTGCCTGTaGACCATCCCGCCCAGGGTCCACCGGCGATCCAGG +
Preference number: 6 (lower is better)
Translates to: TVTYFSSRLCCL*TIPPRVHRRSR
Trigger: CCTGGATCGCCGGTGGACCCTGGGCGGGATGGTCAACAGGCAGCACAGCCGAGAGGAGAAGTATGTCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369774.8
CDS CAA 90 bp TTGGGCCGGGTCAGCGTGCTTGTGCGGCGGCTCAGGTTGGGCTTCTaGCGCTTATCGATGTATGATGCGGGGGCCCAGCCCTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LGRVSVLVRRLRLGF*RLSMYDAGAQPSFS
Trigger: TGAGAAGGAGGGCTGGGCCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp TCAGTGGCCGTGAGTGACTCATTCCTCCGCAGGGCGCAGGACAGGTaGTTGTCCTTGGGTGGCGGGGACACAAACACCGACTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: SVAVSDSFLRRAQDR*LSLGGGDTNTDWGL
Trigger: CAGGCCCCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCACGGCCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp TCCATCTTCTCTTGGCTCTGCGACTCTGCTCGGTTTAGGAATGGCTaGGGCCGGACCGATGGCTTGGCCCGGGGACAGGAGGTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: SIFSWLCDSARFRNG*GRTDGLARGQEVSP
Trigger: TGGGCTGACCTCCTGTCCCCGGGCCAAGCCATCGGTCCGGCCCAAGCCATTCCTAAACCGAGCAGAGTCGCAGAGCCAAGAGAAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GCCCTTGGCGGGCACTGTGTCCAGCTCTTTGCCAGAGGGGTCAGGTaGCTCGTTCTCATCCAGCACCAAATAGTGGGAAGGGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: ALGGHCVQLFARGVR*LVLIQHQIVGRGPA
Trigger: GGCTGGGCCCCTTCCCACTATTTGGTGCTGGATGAGAACGAGCAACCTGACCCCTCTGGCAAAGAGCTGGACACAGTGCCCGCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp TGCTCACGAACCACCAGCCGCTCTCGTTCTTCTCGATaGCATCCACCACCTCCCCGGCCTGGAGGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: CSRTTSRSRSSR*HPPPPRPGGSA
Trigger: AGCTGAGCCTCCAGGCCGGGGAGGTGGTGGATGTCATCGAGAAGAACGAGAGCGGCTGGTGGTTCGTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp TCAGCGTGCTTGTGCGGCGGCTCAGGTTGGGCTTCTTaGGCTTATCGATGTATGATGCGGGGGCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: SACLCGGSGWAS*AYRCMMRGPSP
Trigger: AGGGCTGGGCCCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CGGCCAGGTTCTTCTTCCGGGTTGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGATGCTGGCGCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RPGSSSGLAGHP*PSSGRMLAPSP
Trigger: AGGGCTGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACCCGGAAGAAGAACCTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GGCAATGGGGGCCTCATGGCCCTCGCCTTCGGCTGGTaGAGTTTCCTTGTCCCCAGACGCCTTCTTGTTCAG +
Preference number: 6 (lower is better)
Translates to: GNGGLMALAFGW*SFLVPRRLLVQ
Trigger: CTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TTGGGCCGGGTCAGCGTGCTTGTGCGGCGGCTCAGGTaGGGCTTCTTGCGCTTATCGATGTATGATGCGGGG +
Preference number: 6 (lower is better)
Translates to: LGRVSVLVRRLR*GFLRLSMYDAG
Trigger: CCCCGCATCATACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACAAGCACGCTGACCCGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp CTGCCATTGGAGGCATTGCAGAGGATGGGCAGGCTGATCTCCTTCTaGGCAATGGGGGCCTCATGGCCCTCGCCTTCGGCTGGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LPLEALQRMGRLISF*AMGASWPSPSAGGV
Trigger: AACTCCACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGCCAAGAAGGAGATCAGCCTGCCCATCCTCTGCAATGCCTCCAATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GAGACAGTCCTGTCAGGAACGCCCACGGCACTGCCATTGGAGGCATaGCAGAGGATGGGCAGGCTGATCTCCTTCTTGGCAATGGGGGCC +
Preference number: 6 (lower is better)
Translates to: ETVLSGTPTALPLEA*QRMGRLISFLAMGA
Trigger: GGCCCCCATTGCCAAGAAGGAGATCAGCCTGCCCATCCTCTGCAATGCCTCCAATGGCAGTGCCGTGGGCGTTCCTGACAGGACTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GCCAGCCTGGAGACAGTCCTGTCAGGAACGCCCACGGCACTGCCATaGGAGGCATTGCAGAGGATGGGCAGGCTGATCTCCTTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: ASLETVLSGTPTALP*EALQRMGRLISFLA
Trigger: TGCCAAGAAGGAGATCAGCCTGCCCATCCTCTGCAATGCCTCCAATGGCAGTGCCGTGGGCGTTCCTGACAGGACTGTCTCCAGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp GTGGCTTTGGCAGTTGGAACCCCAGGCTGGATTCTCTaGGTGGTGGAGGTCTTGTCCGTAGGTTCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: VALAVGTPGWIL*VVEVLSVGSGS
Trigger: GCTCCCCGAACCTACGGACAAGACCTCCACCACGCAGAGAATCCAGCCTGGGGTTCCAACTGCCAAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp GGGCGTGGCCTTCTTGCTCTGGTTGACGGTGTTCAGTaGTTGGACGCGCCTCTCGATCTTCTCCAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: GRGLLALVDGVQ*LDAPLDLLQAV
Trigger: GACAGCCTGGAGAAGATCGAGAGGCGCGTCCAAGCACTGAACACCGTCAACCAGAGCAAGAAGGCCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CTTGGCAATGGGGGCCTCATGGCCCTCGCCTTCGGCTaGTGGAGTTTCCTTGTCCCCAGACGCCTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: LGNGGLMALAFG*WSFLVPRRLLV
Trigger: AACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CCGAAGCAGAGCGGGGCTTCAGGTCGCCACTGGTTTTaGACAAGGAAGAGGAGGAGGAGGAAGAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: PKQSGASGRHWF*TRKRRRRKRRS
Trigger: GCTCCTCCTCTTCCTCCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGCCCCGCTCTGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp GAGACAGTCCTGTCAGGAACGCCCACGGCACTGCCATaGGAGGCATTGCAGAGGATGGGCAGGCTGATCTCC +
Preference number: 6 (lower is better)
Translates to: ETVLSGTPTALP*EALQRMGRLIS
Trigger: GGAGATCAGCCTGCCCATCCTCTGCAATGCCTCCAATGGCAGTGCCGTGGGCGTTCCTGACAGGACTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TGGACGCGCCTCTCGATCTTCTCCAGGCTGTCTGATTaGCCTTCGTTCTGCCTGCCCTTGGCGGGCACTGTG +
Preference number: 6 (lower is better)
Translates to: WTRLSIFSRLSD*PSFCLPLAGTV
Trigger: CACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGAGAGGCGCGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp AGTGACTCATTCCTCCGCAGGGCGCAGGACAGGTTGTaGTCCTTGGGTGGCGGGGACACAAACACCGACTGG +
Preference number: 6 (lower is better)
Translates to: SDSFLRRAQDRL*SLGGGDTNTDW
Trigger: CCAGTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp GTGAGTGACTCATTCCTCCGCAGGGCGCAGGACAGGTaGTTGTCCTTGGGTGGCGGGGACACAAACACCGAC +
Preference number: 6 (lower is better)
Translates to: VSDSFLRRAQDR*LSLGGGDTNTD
Trigger: GTCGGTGTTTGTGTCCCCGCCACCCAAGGACAACAACCTGTCCTGCGCCCTGCGGAGGAATGAGTCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GCAATGGGGGCCTCATGGCCCTCGCCTTCGGCTGGTGGAGTTTCCTaGTCCCCAGACGCCTTCTTGTTCAGCAGGTTGCTGATCTCCATG +
Preference number: 6 (lower is better)
Translates to: AMGASWPSPSAGGVS*SPDAFLFSRLLISM
Trigger: CATGGAGATCAGCAACCTGCTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGGCCATGAGGCCCCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp ATGCCTGCGTCCGAAGCAGAGCGGGGCTTCAGGTCGCCACTGGTTTaGGACAAGGAAGAGGAGGAGGAGGAAGAGGAGGAGCAGCAAGTG +
Preference number: 6 (lower is better)
Translates to: MPASEAERGFRSPLV*DKEEEEEEEEEQQV
Trigger: CACTTGCTGCTCCTCCTCTTCCTCCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGCCCCGCTCTGCTTCGGACGCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp CTCATAGATGGTCTCCTCTTCCAGGGCCACATCCTCTaGAGACTCACCCACCTTGAAGCGGGCCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LIDGLLFQGHIL*RLTHLEAGPLQ
Trigger: CTGCAGCGGGCCCGCTTCAAGGTGGGTGAGTCTTCAGAGGATGTGGCCCTGGAAGAGGAGACCATCTATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp GCTGGCCTGTGGGTCTCAGCTGGCGCCGTAAAGTGCTaGTGTCCATCTTCTCTTGGCTCTGCGACTCTGCTC +
Preference number: 6 (lower is better)
Translates to: AGLWVSAGAVKC*CPSSLGSATLL
Trigger: GAGCAGAGTCGCAGAGCCAAGAGAAGATGGACATCAGCACTTTACGGCGCCAGCTGAGACCCACAGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp TATAGTTGGACACCACCACGTACTGTTCCAGGATCATaGGCTCGGCGGTGGCGTCGGCACCTGTCACGTCCT +
Preference number: 6 (lower is better)
Translates to: YSWTPPRTVPGS*ARRWRRHLSRP
Trigger: AGGACGTGACAGGTGCCGACGCCACCGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GATCTCCACTGGGCCGGCCAGGTTCTTCTTCCGGGTTaGCAGGTCATCCTTGGCCTTCTTCAGGTAGGATGC +
Preference number: 6 (lower is better)
Translates to: DLHWAGQVLLPG*QVILGLLQVGC
Trigger: GCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACCCGGAAGAAGAACCTGGCCGGCCCAGTGGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GTACTCCACCTCAACAGAAGGGGGCTCTGGTGGCTTTaGCAGTTGGAACCCCAGGCTGGATTCTCTGCGTGG +
Preference number: 6 (lower is better)
Translates to: VLHLNRRGLWWL*QLEPQAGFSAW
Trigger: CCACGCAGAGAATCCAGCCTGGGGTTCCAACTGCCAAAGCCACCAGAGCCCCCTTCTGTTGAGGTGGAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TCCGAAGCAGAGCGGGGCTTCAGGTCGCCACTGGTTTaGGACAAGGAAGAGGAGGAGGAGGAAGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SEAERGFRSPLV*DKEEEEEEEEE
Trigger: CTCCTCCTCTTCCTCCTCCTCCTCTTCCTTGTCCAAAACCAGTGGCGACCTGAAGCCCCGCTCTGCTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp TTCAGTGCTTGGACGCGCCTCTCGATCTTCTCCAGGCTGTCTGATTaGCCTTCGTTCTGCCTGCCCTTGGCGGGCACTGTGTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: FSAWTRLSIFSRLSD*PSFCLPLAGTVSSS
Trigger: AGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGAGAGGCGCGTCCAAGCACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp TCTGTCCTCCACGGGCTCCTCGCTCAGCTCAGGCTCTaGGTCAAAGCCGAATGCAGGGATGTCATACTCAGG +
Preference number: 6 (lower is better)
Translates to: SVLHGLLAQLRL*VKAECRDVILR
Trigger: CCTGAGTATGACATCCCTGCATTCGGCTTTGACTCAGAGCCTGAGCTGAGCGAGGAGCCCGTGGAGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp GGTTGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGATaGTGGCGCCCAGCCCTCTTTGCCCAGGTATCTGAT +
Preference number: 6 (lower is better)
Translates to: GWQVILGLLQVG*WRPALFAQVSD
Trigger: ATCAGATACCTGGGCAAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp TCTTCTCCAGGCTGTCTGATTTGCCTTCGTTCTGCCTaGCCTTGGCGGGCACTGTGTCCAGCTCTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: SSPGCLICLRSA*PWRALCPALCQ
Trigger: CTGGCAAAGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GGACCTTCTGGTAGGCGCTGCATGTCATGTACGAGGTaGCTGGCCCTTCCCATTCCTTCTTGGTGGGACATG +
Preference number: 6 (lower is better)
Translates to: GPSGRRCMSCTR*LALPIPSWWDM
Trigger: CATGTCCCACCAAGAAGGAATGGGAAGGGCCAGCCACCTCGTACATGACATGCAGCGCCTACCAGAAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp AGTACTCCACCTCAACAGAAGGGGGCTCTGGTGGCTTaGGCAGTTGGAACCCCAGGCTGGATTCTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: STPPQQKGALVA*AVGTPGWILCV
Trigger: CACGCAGAGAATCCAGCCTGGGGTTCCAACTGCCAAAGCCACCAGAGCCCCCTTCTGTTGAGGTGGAGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GCTGGTGGAGTTTCCTTGTCCCCAGACGCCTTCTTGTTCAGCAGGTaGCTGATCTCCATGATGTTCCCAATGATCTCCACTGGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: AGGVSLSPDAFLFSR*LISMMFPMISTGPA
Trigger: GGCCGGCCCAGTGGAGATCATTGGGAACATCATGGAGATCAGCAACCTGCTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS GCA 72 bp TCGATCTTCTCCAGGCTGTCTGATTTGCCTTCGTTCTaGCTGCCCTTGGCGGGCACTGTGTCCAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: SIFSRLSDLPSF*LPLAGTVSSSL
Trigger: CAAAGAGCTGGACACAGTGCCCGCCAAGGGCAGGCAGAACGAAGGCAAATCAGACAGCCTGGAGAAGATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GTTGCTGATCTCCATGATGTTCCCAATGATCTCCACTaGGCCGGCCAGGTTCTTCTTCCGGGTTGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: VADLHDVPNDLH*AGQVLLPGWQV
Trigger: GACCTGCCAACCCGGAAGAAGAACCTGGCCGGCCCAGTGGAGATCATTGGGAACATCATGGAGATCAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp GTGGCCTTCTTGCTCTGGTTGACGGTGTTCAGTGCTTaGACGCGCCTCTCGATCTTCTCCAGGCTGTCTGAT +
Preference number: 6 (lower is better)
Translates to: VAFLLWLTVFSA*TRLSIFSRLSD
Trigger: ATCAGACAGCCTGGAGAAGATCGAGAGGCGCGTCCAAGCACTGAACACCGTCAACCAGAGCAAGAAGGCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp GGGCACTGTGTCCAGCTCTTTGCCAGAGGGGTCAGGTaGCTCGTTCTCATCCAGCACCAAATAGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GHCVQLFARGVR*LVLIQHQIVGR
Trigger: CCTTCCCACTATTTGGTGCTGGATGAGAACGAGCAACCTGACCCCTCTGGCAAAGAGCTGGACACAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp CCCTCGCCTTCGGCTGGTGGAGTTTCCTTGTCCCCAGACGCCTTCTaGTTCAGCAGGTTGCTGATCTCCATGATGTTCCCAATGATCTCC +
Preference number: 6 (lower is better)
Translates to: PSPSAGGVSLSPDAF*FSRLLISMMFPMIS
Trigger: GGAGATCATTGGGAACATCATGGAGATCAGCAACCTGCTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGAAGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp TGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGATGCTaGCGCCCAGCCCTCTTTGCCCAGGTATCTGATATA +
Preference number: 6 (lower is better)
Translates to: WQVILGLLQVGC*RPALFAQVSDI
Trigger: TATATCAGATACCTGGGCAAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAGGCCAAGGATGACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp TCCTCTTGGAACTGCCATAGTCCTCTTTTGGAGGGTTaGCATCCTCGGGTCGAGCCTCGAAGAACCGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSWNCHSPLLEG*HPRVEPRRTGR
Trigger: TCTTCCGGTTCTTCGAGGCTCGACCCGAGGATGTCAACCCTCCAAAAGAGGACTATGGCAGTTCCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp CCTCTGCATATGGCCGGAAGCCCTCATTCTCATAGATaGTCTCCTCTTCCAGGGCCACATCCTCTGAAGACT +
Preference number: 6 (lower is better)
Translates to: PLHMAGSPHSHR*SPLPGPHPLKT
Trigger: AGTCTTCAGAGGATGTGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGGGCTTCCGGCCATATGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TCGGCTGGTGGAGTTTCCTTGTCCCCAGACGCCTTCTaGTTCAGCAGGTTGCTGATCTCCATGATGTTCCCA +
Preference number: 6 (lower is better)
Translates to: SAGGVSLSPDAF*FSRLLISMMFP
Trigger: TGGGAACATCATGGAGATCAGCAACCTGCTGAACAAGAAGGCGTCTGGGGACAAGGAAACTCCACCAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 90 bp GAGGAGTGGTTCTTCCCCATTTCTGCCTGGGCATTCTTCTCTGCCTaGAGCTTTAGGAGTGATGATGACTTGGGGGAGCCTGATTTGGGG +
Preference number: 6 (lower is better)
Translates to: EEWFFPISAWAFFSA*SFRSDDDLGEPDLG
Trigger: CCCCAAATCAGGCTCCCCCAAGTCATCATCACTCCTAAAGCTCAAGGCAGAGAAGAATGCCCAGGCAGAAATGGGGAAGAACCACTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS TCA 72 bp GAGACGTACACATCTTTGAGGTTATTGTGGATGAACTaGGACTTCTCGATGGGCTTGGGGCGCACAGGGGAC +
Preference number: 6 (lower is better)
Translates to: ETYTSLRLLWMN*DFSMGLGRTGD
Trigger: GTCCCCTGTGCGCCCCAAGCCCATCGAGAAGTCTCAGTTCATCCACAATAACCTCAAAGATGTGTACGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CAA 72 bp TGTGACGCCCTTCTCAAAGCCAATCTCGTCCTTGCTTaGGCTGGTGTAAGGCTGCACGGTGACATACTTCTC +
Preference number: 6 (lower is better)
Translates to: CDALLKANLVLA*AGVRLHGDILL
Trigger: GAGAAGTATGTCACCGTGCAGCCTTACACCAGCCAAAGCAAGGACGAGATTGGCTTTGAGAAGGGCGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1
CDS CCA 72 bp AAGGAGGCTGAGGAGTGGTTCTTCCCCATTTCTGCCTaGGCATTCTTCTCTGCCTTGAGCTTTAGGAGTGAT +
Preference number: 6 (lower is better)
Translates to: KEAEEWFFPISA*AFFSALSFRSD
Trigger: ATCACTCCTAAAGCTCAAGGCAGAGAAGAATGCCCAGGCAGAAATGGGGAAGAACCACTCCTCAGCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315994.6
ENST00000355946.6
ENST00000369774.8
ENST00000420222.1