RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3KBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000147010

Ensembl transcript IDs: ENST00000379697.7, ENST00000379698.8, ENST00000379716.5, ENST00000379726.7, ENST00000397821.8, ENST00000431164.1, ENST00000432234.5, ENST00000477102.1, ENST00000494961.5

Found 529 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTaGAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCC +
Preference number: 1 (lower is better)
Translates to: TSRGTKRDTPPAFPG*RAVGLASNKAQEKP
Trigger: GGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379697.7
3UTR GCA 90 bp ATGGCCTCTATGAGGGGGAAGACATCAGCTCTCTACATTCCATGTTaGCAGTGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAAC +
Preference number: 1 (lower is better)
Translates to: MASMRGKTSALYIPC*QCSMRVFQPLNFIN
Trigger: GTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACACTGGCAACATGGAATGTAGAGAGCTGATGTCTTCCCCCTCATAGAGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR GCA 90 bp AGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCATAAATaGAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: RQTSVSLGKKKQLHK*KKVPVATLQHDPPP
Trigger: GGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTATGGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCAAAAACCCCTGTGTGTaGGCAGGGCCTAAATGCTGG +
Preference number: 2 (lower is better)
Translates to: DKEGHATCISRLKGSWPCKNPCV*AGPKCW
Trigger: CCAGCATTTAGGCCCTGCTCACACACAGGGGTTTTT...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
3UTR CAA 90 bp ACCACAGAGCACGCCCAACTTCACAGCTGTCTCCTCTTAGGACCTTaGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTAGTGGA +
Preference number: 2 (lower is better)
Translates to: TTEHAQLHSCLLLGP*ARVREALKTVASSG
Trigger: TCCACTAGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAGACAGCTGTGAAGTTGGGCGTGCTCTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCATGTTCACGCAAAAGGTaGAAAGGACAGAAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: AESSCWVARGAAMKLDIPCSRKR*KGQKAG
Trigger: CCCTGCTTTCTGTCCTTTGCACCTTTTGCGTGAACA...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGGTTGCCAGTGTTCCATaGGGGTGTTCCAACCGCTCA +
Preference number: 2 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGVASVP*GCSNRS
Trigger: TGAGCGGTTGGAACACCCTCATGGAACACTGGCAAC...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAGGGATGTTTTACGCTaGTCTTGGGAACCTGGCACT +
Preference number: 2 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGRDVLR*SWEPGT
Trigger: AGTGCCAGGTTCCCAAGAGCAGCGTAAAACATCCCT...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACATGTTCACGCAAAAGGTaGAAAGGACAGAAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTCSRKR*KGQKAG
Trigger: CCCTGCTTTCTGTCCTTTGCACCTTTTGCGTGAACA...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACACTCTACATTCCATGTTaGCAGTGTTCCATGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTLYIPC*QCSMRV
Trigger: CACCCTCATGGAACACTGGCAACATGGAATGTAGAG...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAACCCAGGACTAAACCCTaGGGAAGATTCTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKPRTKP*GRFSSW
Trigger: CCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGG...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR CAA 90 bp AATGGCCTCTATGAGGGGGAAGACATCAGCTCTCTACATTCCATGTaGCCAGTGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAA +
Preference number: 2 (lower is better)
Translates to: NGLYEGEDISSLHSM*PVFHEGVPTAQFHQ
Trigger: TTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACACTGGCAACATGGAATGTAGAGAGCTGATGTCTTCCCCCTCATAGAGGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR CAA 90 bp CATTCTCGATGGGTCCATTTTGTAAAGAGTAAAGATGGTGGCAGTTaGGGTAGCGGCTCGTCCAGTTCCTTGATGCAGAATCCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: HSRWVHFVKSKDGGS*GSGSSSSLMQNPLA
Trigger: AGCAAGAGGATTCTGCATCAAGGAACTGGACGAGCCGCTACCCAAACTGCCACCATCTTTACTCTTTACAAAATGGACCCATCGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAATGGAATTTGTGTTGTaGTATCAAGACTTTTGTGCT +
Preference number: 2 (lower is better)
Translates to: AESSCWVARGAAMKLDIPMEFVL*YQDFCA
Trigger: AGCACAAAAGTCTTGATAGCACAACACAAATTCCAT...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACTTTCTCTTAGGGTGGTaGGGTTTGCTGGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYFLLGW*GLLAGK
Trigger: TTTCCCTGCCAGCAAACCCCACCACCCTAAGAGAAA...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGTTTTCATTTCGCATTaGGATCTCAGAGTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTVFISH*DLRVEK
Trigger: CTTTTCTACTCTGAGATCTCAATGCGAAATGAAAAC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACGGAAGGGGTTACAAGTaGGCAAGGCAAATGACATTA +
Preference number: 2 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYGRGYK*ARQMTL
Trigger: TAATGTCATTTGCCTTGCTCACTTGTAACCCCTTCC...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGGAAGATTCTCCTCTTaGATGGAATTTGTGTTGTGC +
Preference number: 2 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKGRFSS*MEFVLC
Trigger: GCACAACACAAATTCCATCCAAGAGGAGAATCTTCC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATC +
Preference number: 2 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKDSPLG*NLCCAI
Trigger: GATAGCACAACACAAATTCCATCCAAGAGGAGAATC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAAAAATAGTACCACTATaGACTAAACTGCCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTKIVPL*TKLPEF
Trigger: AAACTCAGGCAGTTTAGTCCATAGTGGTACTATTTT...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACCACTATGGACTAAACTaGCTGAGTTTTCATTTCGCA +
Preference number: 2 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYHYGLN*LSFHFA
Trigger: TGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTG...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCTTGAATCATGGTAGCTaGATCACAAAAGCTCCAATC +
Preference number: 2 (lower is better)
Translates to: INARKFQWLHFNMTLLPFLNHGS*ITKAPI
Trigger: GATTGGAGCTTTTGTGATGCAGCTACCATGATTCAA...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATGGAAGATTCTCCTCTTaGATGGAATTTGTGTTGTGC +
Preference number: 2 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYGRFSS*MEFVLC
Trigger: GCACAACACAAATTCCATCCAAGAGGAGAATCTTCC...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAAAGGACACTCGCTTCTaGCTACGTGTAGTACAAACA +
Preference number: 2 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKKDTRF*LRVVQT
Trigger: TGTTTGTACTACACGTAGTCAGAAGCGAGTGTCCTT...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACAAGGCAGCTCTTAGCCTaGAGCAAAAGAAAAGGACAC +
Preference number: 2 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTRQLLA*SKRKGH
Trigger: GTGTCCTTTTCTTTTGCTTCAGGCTAAGAGCTGCCT...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR TCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCAGTGAGCAAGGCAAATaGCATTATGTGAATACAGTT +
Preference number: 2 (lower is better)
Translates to: INARKFQWLHFNMTLLPFSEQGK*HYVNTV
Trigger: AACTGTATTCACATAATGTCATTTGCCTTGCTCACT...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATCACTATGGACTAAACTaGCTGAGTTTTCATTTCGCA +
Preference number: 2 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYHYGLN*LSFHFA
Trigger: TGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTG...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATC +
Preference number: 2 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEDSPLG*NLCCAI
Trigger: GATAGCACAACACAAATTCCATCCAAGAGGAGAATC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAATGGAATTTGTGTTGTaGTATCAAGACTTTTGTGCT +
Preference number: 2 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRMEFVL*YQDFCA
Trigger: AGCACAAAAGTCTTGATAGCACAACACAAATTCCAT...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAAGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATC +
Preference number: 2 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKDSPLG*NLCCAI
Trigger: GATAGCACAACACAAATTCCATCCAAGAGGAGAATC...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR GCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGAAGGCACAGATCATTaGAAATACCAGATTTTCTCT +
Preference number: 2 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKEGTDH*KYQIFS
Trigger: AGAGAAAATCTGGTATTTGCAATGATCTGTGCCTTC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR TCA 72 bp ATGGTGGCAGTTTGGGTAGCGGCTCGTCCAGTTCCTTaGTGCAGAATCCTCTTGCTGGGTAGCCCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: MVAVWVAARPVP*CRILLLGSPRG
Trigger: GCCCCTCGGGCTACCCAGCAAGAGGATTCTGCATCAAGGAACTGGACGAGCCGCTACCCAAACTGCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR GCA 72 bp CACAACATCCAGGGGGACAAAGAGGGACACGCCACCTaGATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: HNIQGDKEGHAT*ISRLKGSWPCF
Trigger: GAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
3UTR TCA 72 bp GGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTaGAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GTKRDTPPAFPG*RAVGLASNKAQ
Trigger: CTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
3UTR CCA 72 bp CGGCTCGTCCAGTTCCTTGATGCAGAATCCTCTTGCTaGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATA +
Preference number: 3 (lower is better)
Translates to: RLVQFLDAESSC*VARGAAMKLDI
Trigger: TATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGCATCAAGGAACTGGACGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAAAGCAGGGGTTTAACTaGGCTGATGAAAAATCAAGC +
Preference number: 3 (lower is better)
Translates to: AESSCWVARGAAMKLDIPKQGFN*ADEKSS
Trigger: GCTTGATTTTTCATCAGCCAAGTTAAACCCCTGCTT...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR GCA 72 bp ATGAGGGGGAAGACATCAGCTCTCTACATTCCATGTTaGCAGTGTTCCATGAGGGTGTTCCAACCGCTCAAT +
Preference number: 3 (lower is better)
Translates to: MRGKTSALYIPC*QCSMRVFQPLN
Trigger: ATTGAGCGGTTGGAACACCCTCATGGAACACTGGCAACATGGAATGTAGAGAGCTGATGTCTTCCCCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGCTGGGGCAGAAAATTaGAGTCTCGGACTCAGGATG +
Preference number: 3 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKAGAEN*SLGLRM
Trigger: CATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAGCTGGGGCAGAAAATTaGAGTCTCGGACTCAGGATG +
Preference number: 3 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRAGAEN*SLGLRM
Trigger: CATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGC...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGAGACAAAGCAGCTTTaGAGAAACACATCCAACATC +
Preference number: 3 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTETKQL*RNTSNI
Trigger: GATGTTGGATGTGTTTCTCAAAAGCTGCTTTGTCTC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAAGCTGGGGCAGAAAATTaGAGTCTCGGACTCAGGATG +
Preference number: 3 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKAGAEN*SLGLRM
Trigger: CATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGC...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGCCTTTAGCACAATTTaGCTCTGTGTAAGTCACAAC +
Preference number: 3 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKAFSTI*LCVSHN
Trigger: GTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR CCA 72 bp CCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATCAAGACTTTTGTGCTA +
Preference number: 3 (lower is better)
Translates to: PGLNPGEDSPLG*NLCCAIKTFVL
Trigger: TAGCACAAAAGTCTTGATAGCACAACACAAATTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGACCTCTTGGATGGAATTaGTGTTGTGCTATCAAGACT +
Preference number: 3 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRPLGWN*CCAIKT
Trigger: AGTCTTGATAGCACAACACAAATTCCATCCAAGAGG...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCGGGAAGATTCTCCTCTaGGATGGAATTTGTGTTGTG +
Preference number: 3 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSGKILL*DGICVV
Trigger: CACAACACAAATTCCATCCAAGAGGAGAATCTTCCC...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCGCCTTTAGCACAATTTaGCTCTGTGTAAGTCACAAC +
Preference number: 3 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCAFSTI*LCVSHN
Trigger: GTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGC...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR-3UTR CAA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAACCTCTTGGATGGAATTaGTGTTGTGCTATCAAGACT +
Preference number: 3 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKPLGWN*CCAIKT
Trigger: AGTCTTGATAGCACAACACAAATTCCATCCAAGAGG...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR GCA 72 bp TCAGTTTCCTTGGGAAAGAAAAAGCAACTCCATAAATaGAAGAAAGTTCCAGTGGCTACACTTCAACATGAC +
Preference number: 3 (lower is better)
Translates to: SVSLGKKKQLHK*KKVPVATLQHD
Trigger: GTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTATGGAGTTGCTTTTTCTTTCCCAAGGAAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCGGGATCGGGGCGCTaGGATCCAGGCGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QGDKEGHATCISRLKGSWPGSGR*DPGARV
Trigger: GACCCTCGCGCCTGGATCCCAGCGCCCCGATCCCGG...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAGCCGCCGAGGCAGCGTaGAAGTTGGCGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPAAEAA*KLAEAG
Trigger: GCCCGCCTCCGCCAACTTTCACGCTGCCTCGGCGGC...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGGCCGCCGAGGCAGCGTaGAAGTTGGCGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRAAEAA*KLAEAG
Trigger: GCCCGCCTCCGCCAACTTTCACGCTGCCTCGGCGGC...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCATGCTGCTGCCGCTGCTaGCCCGGGGCGACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPCCCRC*PGATPA
Trigger: AGCAGGAGTCGCCCCGGGGCAGCAGCGGCAGCAGCA...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAATCCTCCACGGCCGCCTaGCTGCTGGCCGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMESSTAA*LLAAGS
Trigger: GGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGA...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATCCTCCACGGCCGCCTaGCTGCTGGCCGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGSSTAA*LLAAGS
Trigger: GGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGA...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCGGACGCGGCGGCGGCTaGGCCGGCTTCTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RHLHFQAEGQLALLLIRPGRGGG*AGFFLS
Trigger: ACTGAGGAAGAAGCCGGCCCAGCCGCCGCCGCGTCC...GGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGCCTTCTCGGGGGCAGTaGGCCAGGTCTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: HPGGQRGTRHLHFQAEGQPSRGQ*ARSAER
Trigger: TCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGG...CTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACCCACCGCCACCTGCTaGCATGGTCCCCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEPTATC*HGPRLG
Trigger: CCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCATGGCCCACCGCCACCTaGTGCCATGGTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPWPTAT*CHGPRL
Trigger: AAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCA...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp AAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTATGGCCTCCACCATTaGCGTCGAGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: KEGHATCISRLKGSWPCFYGLHH*RRAGPG
Trigger: GCCCGGCCCGGCTCGACGCCAATGGTGGAGGCCATA...GAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTGGGCAGGTAGCTGAATaGCACCTGGCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: QRGTRHLHFQAEGQLALLGQVAE*HLAPAP
Trigger: AGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCC...AAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGGGAACACGCCTCGTCTaGCGTTCAGCTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HPGGQRGTRHLHFQAEGQGTRLV*RSALLP
Trigger: GGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCC...CTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp CCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGGGCAGCAGAGAAGCTaGAGGGAGACCTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGGQRGTRHLHFQAEGQLGQQRS*RETFRP
Trigger: AGGCCTGAAGGTCTCCCTCCAGCTTCTCTGCTGCCC...CAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAATATGGCCTCCACCATTaGCGTCGAGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEYGLHH*RRAGPG
Trigger: GCCCGGCCCGGCTCGACGCCAATGGTGGAGGCCATA...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR GCA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCACTGGGCACTTCGTaGAGGGGCTTTTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGDKEGHATCISRLKGSWPLGTS*RGFSGA
Trigger: AGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGG...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp CATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGAGCGGATGGAGGCGGTaGCTTCTTGGGTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: HPGGQRGTRHLHFQAEGQSGWRR*LLGSIP
Trigger: GGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCT...CTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGTCCTCCACGGCCGCCTaGCTGCTGGCCGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGSSTAA*LLAAGS
Trigger: GGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGA...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGAGGCAGCGTGAAAGTTaGCGGAGGCGGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TRHLHFQAEGQLALLLIRRQRES*RRRAWG
Trigger: CCCCCACGCCCGCCTCCGCCAACTTTCACGCTGCCT...CCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp CCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGTCCTCCCAAGGTCTGTaGCAGTCAGTTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGGQRGTRHLHFQAEGQLSSQGL*QSVPLL
Trigger: CAGGAGGGGAACTGACTGCCACAGACCTTGGGAGGA...CAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTCTGGGGCAGGTAGCTaGATGCCACCTGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVSGAGS*MPPGTG
Trigger: GCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGA...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp CATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGAGACTTGGTGCTGCTTaGGTCACCCCCATCACTCTC +
Preference number: 4 (lower is better)
Translates to: HPGGQRGTRHLHFQAEGQRLGAA*VTPITL
Trigger: GAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCT...CTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCACACTCACTCCTGCCTaGGTGCAGGAGCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: DKEGHATCISRLKGSWPCTLTPA*VQEQGQ
Trigger: CTGTCCTTGCTCCTGCACTCAGGCAGGAGTGAGTGT...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp AAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCGGTACCCAGTCCTCATaGAACCCACACCGCACCCCT +
Preference number: 4 (lower is better)
Translates to: KEGHATCISRLKGSWPCFGTQSS*NPHRTP
Trigger: AGGGGTGCGGTGTGGGTTTCATGAGGACTGGGTACC...GAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp AGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGTRHLHFQAEGQLALLLDDRSG*RRWLLG
Trigger: CCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATC...TAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAGAAGATGTGAGGGACTaGGACGGAGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEEDVRD*DGGRLP
Trigger: AGGGAGGCGGCCTCCGTCCCAGTCCCTCACATCTTC...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTCCAGTCTTCCCGTTaGGAACACCTTCCCACCATC +
Preference number: 4 (lower is better)
Translates to: HPGGQRGTRHLHFQAEGQFQSSR*EHLPTI
Trigger: GATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAA...CTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCGCTCATCCTGGGAAATaGCAAGCTCATCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: DKEGHATCISRLKGSWPCAHPGK*QAHPTP
Trigger: GGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGC...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCCTTGGGCTGGATTGCTaGAGTTGCCACTGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: DKEGHATCISRLKGSWPCLGLDC*SCHCPV
Trigger: AACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAG...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp AGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTACCTCACACTCACTCCTaGCTGAGTGCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RGTRHLHFQAEGQLALLLPHTHS*LSAGAR
Trigger: CCTTGCTCCTGCACTCAGGCAGGAGTGAGTGTGAGG...TAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGTTTTGCTCCGTGAGCTaGAAAGGGCAGCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QGDKEGHATCISRLKGSWFCSVS*KGQQRS
Trigger: GCTTCTCTGCTGCCCTTTCCAGCTCACGGAGCAAAA...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp CAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTGAGCACAGCAGTACCTaGTGTGTGTCAGCGGACCCA +
Preference number: 4 (lower is better)
Translates to: QRGTRHLHFQAEGQLALLEHSST*CVSADP
Trigger: TGGGTCCGCTGACACACACCAGGTACTGCTGTGCTC...AAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGCCTGCATTTCCAGGCTaGAGGGCAGTTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRPAFPG*RAVGLA
Trigger: AGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGG...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACCACTGGGCACTTCGTaGAGGGGCTTTTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEPLGTS*RGFSGA
Trigger: AGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGGAGGGACACGCCACCTaGATTTCCAGGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVEGHAT*ISRLKG
Trigger: GCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTC...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp CGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCTGGCACCTTCAGACTTaGTGCTGCTTGAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: RHLHFQAEGQLALLLIRPWHLQT*CCLSHP
Trigger: GGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCA...GGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGGTGGTGGGGTTTGCTaGCAGGGAAAGGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGGGGVC*QGKGQV
Trigger: AACCTGTCCCTTTCCCTGCCAGCAAACCCCACCACC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR CAA 72 bp GGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTaGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: GTRHLHFQAEGQ*ALLLIRPRKNP
Trigger: GGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp CGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCTTTCCTTTTGCTCCGTaGGCTGGAAAGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RHLHFQAEGQLALLLIRPFPFAP*AGKGSR
Trigger: TCTGCTGCCCTTTCCAGCTCACGGAGCAAAAGGAAA...GGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGTTGCCAGTGTTCCATaGGGGTGTTCCAACCGCTCA +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGVASVP*GCSNRS
Trigger: TGAGCGGTTGGAACACCCTCATGGAACACTGGCAAC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAGCTCGTCCAGTTCCTTaGTGCAGAATCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPARPVP*CRILLL
Trigger: CAGCAAGAGGATTCTGCATCAAGGAACTGGACGAGC...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGCTTGACTTGGATAGCTaGTCATCCTGGGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: PGGQRGTRHLHFQAEGQLLDLDS*SSWEMP
Trigger: TGGCATTTCCCAGGATGAGCAGCTATCCAAGTCAAG...CAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCACCTTCAGACTTGGTaGTGCTTGAGTCACCCCCAT +
Preference number: 4 (lower is better)
Translates to: QRGTRHLHFQAEGQLALLHLQTW*CLSHPH
Trigger: ATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTG...AAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp AAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCCTCCGTCTTTCCCGGTaGAGCTCGGTACAGAATTGT +
Preference number: 4 (lower is better)
Translates to: KEGHATCISRLKGSWPCFLRLSR*SSVQNC
Trigger: ACAATTCTGTACCGAGCTGCACCGGGAAAGACGGAG...GAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGGCGACTCCTGCTGCTaGTGTTGCATCGCGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTGDSCC*CCIAAQ
Trigger: TTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAGGCCAAGTCAATCTTTaGACTGTCACCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPGQVNL*TVTPGV
Trigger: CACACCAGGGGTGACAGTCCAAAGATTGACTTGGCC...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGAAGATGTGAGGGACTaGGACGGAGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTEDVRD*DGGRLP
Trigger: AGGGAGGCGGCCTCCGTCCCAGTCCCTCACATCTTC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAACAGAGACGGGGAGTTaGCTCTGTGTCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGTETGS*LCVQLF
Trigger: GAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGT...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGGACGCGGCGGCGGCTaGGCCGGCTTCTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFGRGGG*AGFFLS
Trigger: ACTGAGGAAGAAGCCGGCCCAGCCGCCGCCGCGTCC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGGAGCAAGGACAGAAGTaGCCGGTGTCTTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: QGDKEGHATCISRLKGSWEQGQK*PVSSDN
Trigger: ATTATCTGAAGACACCGGCCACTTCTGTCCTTGCTC...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp AAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCGCAGGGCCTAAATGCTaGGTACCCAGTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: KEGHATCISRLKGSWPCFAGPKC*VPSPHE
Trigger: TTCATGAGGACTGGGTACCCAGCATTTAGGCCCTGC...GAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCACTCCTACCACCTCTATaGTGTCGCCAACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPLLPPL*CRQLSA
Trigger: AGCTGAAAGTTGGCGACATCATAGAGGTGGTAGGAG...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAGGCTACACTTCAACATaGCCCTCCTCCCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPGYTST*PSSHSL
Trigger: AAGAGAATGGGAGGAGGGTCATGTTGAAGTGTAGCC...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp ACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGTGTAAGAGGGAAGCTTaGGCACCCCCTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRHLHFQAEGQLALLLIRCKREA*APPSPL
Trigger: GAGAGGAGAAGGGGGTGCTCAAGCTTCCCTCTTACA...CCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGCTTCAGACTTGGTGCTaGTTGAGTCACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRLQTWC*LSHPHH
Trigger: GTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAG...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAACTGGATTGCTGCAGTTaGCACTGTCCCGTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LHFQAEGQLALLLIRPRKLDCCS*HCPVGT
Trigger: GGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAG...TTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGTTTCTTGGGCTGGATTaGTGCAGTTGCCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRFLGLD*CSCHCP
Trigger: GGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAA...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp CAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTGGTAGTCTTTCCTTTTaGTCCGTGAGCTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QRGTRHLHFQAEGQLALLGSLSF*SVSWKG
Trigger: CCCTTTCCAGCTCACGGAGCAAAAGGAAAGACTACC...AAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp ACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGGCAAAGAGTTTCCACTaGGCACTTCGTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRHLHFQAEGQLALLLIRAKSFH*ALRAGA
Trigger: AGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTGC...CCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp AGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAGATAGCTGCTCATCCTaGGAAATGCCAAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RGTRHLHFQAEGQLALLLDSCSS*EMPSSS
Trigger: GGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATC...TAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGACCTCCCTGTAGCTTTTaGTCTGCTTGTGGTCGGATG +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGPPCSF*SACGRM
Trigger: CATCCGACCACAAGCAGACCAAAAGCTACAGGGAGG...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCCGCCACCTGCTGCCATaGTCCCCGGCTTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKARHLLP*SPAWAA
Trigger: TGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCG...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCCGGCCGCCTGGCTGCTaGCCGCAGGCTCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFRPPGC*PQAPSL
Trigger: CAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGGCCG...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACCCAGGACTAAACCCTaGGGAAGATTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEPRTKP*GRFSSW
Trigger: CCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAAAGATGGTGGCAGTTTaGGTAGCGGCTCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEKMVAV*VAARPV
Trigger: AACTGGACGAGCCGCTACCCAAACTGCCACCATCTT...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR CAA 72 bp CACGCCCAACTTCACAGCTGTCTCCTCTTAGGACCTTaGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: HAQLHSCLLLGP*ARVREALKTVA
Trigger: GGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAGACAGCTGTGAAGTTGGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCACTGGAGCTTTGTTGGTaGGAGGGTCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPLELCW*EGLSSS
Trigger: AGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAG...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGCTCATCCGACTCCCCTaGCAGCTCCTTGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVLIRLP*QLLDEV
Trigger: AACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAG...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGAAAAACCCCTGTGTGTaGGCAGGGCCTAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVKNPCV*AGPKCW
Trigger: CCAGCATTTAGGCCCTGCTCACACACAGGGGTTTTT...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAACCTTCTCGGGGGCAGTaGGCCAGGTCTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKPSRGQ*ARSAER
Trigger: TCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGG...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGCCCACCGCCACCTGCTaGCATGGTCCCCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEPTATC*HGPRLG
Trigger: CCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGG...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCCCCCGGGGCGACTCCTaGTGCTGCTGTTGCATCGCG +
Preference number: 4 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCPRGDS*CCCCIA
Trigger: CGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGG...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAGAGGCGGTGGCTTCTTaGGTCTATTCCCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEEAVAS*VYSLPF
Trigger: AAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTC...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTACAGAGACGGGGAGTTaGCTCTGTGTCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LLLGPLARVREALKTVASTETGS*LCVQLF
Trigger: GAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGT...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGGTGGTGGGGTTTGCTaGCAGGGAAAGGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTGGGVC*QGKGQV
Trigger: AACCTGTCCCTTTCCCTGCCAGCAAACCCCACCACC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGCTTCAGGCCTTGACTTaGATAGCTGCTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVLQALT*IAAHPG
Trigger: CCCAGGATGAGCAGCTATCCAAGTCAAGGCCTGAAG...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGAGTCAAACTCCACTATaGCCTCCACCATTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVSQTPL*PPPLAS
Trigger: CGACGCCAATGGTGGAGGCCATAGTGGAGTTTGACT...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGCTGGAGCTTTGTTGGTaGGAGGGTCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRLELCW*EGLSSS
Trigger: AGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAG...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAGACTTGGTGCTGCTTaGGTCACCCCCATCACTCTC +
Preference number: 4 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGRLGAA*VTPITL
Trigger: GAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCT...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGTTGCCAGTGTTCCATaGGGGTGTTCCAACCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTVASVP*GCSNRS
Trigger: TGAGCGGTTGGAACACCCTCATGGAACACTGGCAAC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTTTGCAGTAATCCTTaGTCTTTGTCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QRGTRHLHFQAEGQLALLLCSNP*SLSCCP
Trigger: TGGACAGCAGGACAAAGAGCAAGGATTACTGCAAAG...AAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR GCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAAGTCAATGTCATTGCTaGGGTCCGAGAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPSQCHC*GPRDLC
Trigger: ACAAAGATCTCTCGGACCGCAGCAATGACATTGACT...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTCTTGGGCGGCAGGGATaGTTTGTTGTCAGACACTTG +
Preference number: 4 (lower is better)
Translates to: LLLGPLARVREALKTVASLGRQG*FVVRHL
Trigger: CAAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAG...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCCCACCGCCACCTGCTaGCATGGTCCCCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRPTATC*HGPRLG
Trigger: CCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGG...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGTGGCCCACCGCCACCTaGTGCCATGGTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEWPTAT*CHGPRL
Trigger: AAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCA...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGTTCACGCAAAAGGTaGAAAGGACAGAAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGCSRKR*KGQKAG
Trigger: CCCTGCTTTCTGTCCTTTGCACCTTTTGCGTGAACA...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAACTCAGCGCCGCCCGCTaGTGCCTCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKLSAAR*CLCCCC
Trigger: GCAGCAGCAGCAGAGGCAGCAGCGGGCGGCGCTGAG...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp AGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTGAGCGAGGCGGTGGCTTCTTaGGTCTATTCCCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RAVGLASNKAQEKPLCVSEAVAS*VYSLPF
Trigger: AAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTC...GCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGACCATGGTCCCCGGCTTaGGCGGCAGGGATGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRPWSPA*AAGMLC
Trigger: ACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGG...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACCCATGGTCCCCGGCTTaGGCGGCAGGGATGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYPWSPA*AAGMLC
Trigger: ACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGG...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGCAGAATCCTCTTGCTaGGTAGCCCGAGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFAESSC*VARGAA
Trigger: TGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGAGGCAGCGTGAAAGTTaGCGGAGGCGGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNERQRES*RRRAWG
Trigger: CCCCCACGCCCGCCTCCGCCAACTTTCACGCTGCCT...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp CTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAACTCCTACCACCTCTATaGTGTCGCCAACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LHFQAEGQLALLLIRPRKLLPPL*CRQLSA
Trigger: AGCTGAAAGTTGGCGACATCATAGAGGTGGTAGGAG...TTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR TCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCAACAGCACGGAGCCTaGGGACCCAGCCTAACCCTG +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFQQHGA*GPSLTL
Trigger: CAGGGTTAGGCTGGGTCCTCAGGCTCCGTGCTGTTG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379716.5
CDS-3UTR GCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCCTTCTCGGGGGCAGTaGGCCAGGTCTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFPSRGQ*ARSAER
Trigger: TCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTTGCCAGATAGCGAACTaGCGGCCAAGTCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLGPLARVREALKTVASCQIAN*RPSQSL
Trigger: CAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCA...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACTAAGTCAATGTCATTaGTGCGGTCCGAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMELSQCH*CGPRDL
Trigger: AAGATCTCTCGGACCGCAGCAATGACATTGACTTAG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAATGGCCCACCGCCACCTaGTGCCATGGTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKWPTAT*CHGPRL
Trigger: AAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCA...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAATTAATCTCTCGTTTCTaGTGGTCCTTCATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMELISRF*WSFMVS
Trigger: CGAGACCATGAAGGACCAGCAGAAACGAGAGATTAA...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGATGCAGAATCCTCTTaGTGGGTAGCCCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFDAESS*WVARGA
Trigger: GGCCCCTCGGGCTACCCAGCAAGAGGATTCTGCATC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTATCCTCTTCGGGACTTaGGGAGTCGAAGATATCAGG +
Preference number: 4 (lower is better)
Translates to: LLLGPLARVREALKTVASILFGT*GVEDIR
Trigger: CCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGAT...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCGGCCGCCTGGCTGCTaGCCGCAGGCTCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRRPPGC*PQAPSL
Trigger: CAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGGCCG...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAGGAAGATTCTCCTCTTaGATGGAATTTGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPGRFSS*MEFVLC
Trigger: GCACAACACAAATTCCATCCAAGAGGAGAATCTTCC...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGCAAGAAAGTTCCAGTaGCTACACTTCAACATGACC +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGARKFQ*LHFNMT
Trigger: GGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCCGGGATCGGGGCGCTaGGATCCAGGCGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIPGSGR*DPGARV
Trigger: GACCCTCGCGCCTGGATCCCAGCGCCCCGATCCCGG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR GCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCGGAACACGCCTCGTCTaGCGTTCAGCTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKAGTRLV*RSALLP
Trigger: GGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCC...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGCTGCGCCGGGTTTCCTaGTCCCCGCGAGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISELRRVS*SPRVEI
Trigger: AATTTCCACTCGCGGGGAGCAGGAAACCCGGCGCAG...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGCAAAGAGTTTCCACTaGGCACTTCGTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKAKSFH*ALRAGA
Trigger: AGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTGC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCAGCGGATGGAGGCGGTaGCTTCTTGGGTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFSGWRR*LLGSIP
Trigger: GGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCT...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSDDRSG*RRWLLG
Trigger: CCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATC...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCGCCACCTGCTGCCATaGTCCCCGGCTTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIRHLLP*SPAWAA
Trigger: TGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp AGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTGAGCCACTCTCGGAGCCTGTaGTTTCCCTTAAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: RAVGLASNKAQEKPLCVSHSRSL*FPLNCN
Trigger: ATTACAGTTTAAGGGAAACCACAGGCTCCGAGAGTG...GCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGCGGCTTCTTCCTCAGTaGCGGCGGCGGCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FVLCYQDFCANLSNRDILRLLPQ*RRRRLS
Trigger: GCTGAGCCGCCGCCGCCGCCACTGAGGAAGAAGCCG...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAAGACTTGGTGCTGCTTaGGTCACCCCCATCACTCTC +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRRLGAA*VTPITL
Trigger: GAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCT...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR TCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCCTTCATGGTCTCGATaGTGCTCCTCAGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFPSWSR*CSSARG
Trigger: TCCGCGAGCTGAGGAGCATCATCGAGACCATGAAGG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAAGGCAGCTCTTAGCCTaGAGCAAAAGAAAAGGACAC +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTRQLLA*SKRKGH
Trigger: GTGTCCTTTTCTTTTGCTTCAGGCTAAGAGCTGCCT...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCCACTGGGCACTTCGTaGAGGGGCTTTTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFPLGTS*RGFSGA
Trigger: AGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGTCGTTCACTTCCATCTaGAACCGAAGCCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGSFTSI*NRSRIF
Trigger: GAAAATCCGGCTTCGGTTGCAGATGGAAGTGAACGA...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCAGAAGGCACAGATCATTaGAAATACCAGATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AESSCWVARGAAMKLDIPEGTDH*KYQIFS
Trigger: AGAGAAAATCTGGTATTTGCAATGATCTGTGCCTTC...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATTGAATCATGGTAGCTaGATCACAAAAGCTCCAATC +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGLNHGS*ITKAPI
Trigger: GATTGGAGCTTTTGTGATGCAGCTACCATGATTCAA...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAGCAAAGAGTTTCCACTaGGCACTTCGTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRAKSFH*ALRAGA
Trigger: AGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTGC...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGGCTCGCCTCTCTTATTaGTTCTTAAAATCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRARLSY*FLKSFQ
Trigger: CTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGC...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACTGGCACCTTCAGACTTaGTGCTGCTTGAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYWHLQT*CCLSHP
Trigger: GGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCA...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCAGCGGATGGAGGCGGTaGCTTCTTGGGTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCSGWRR*LLGSIP
Trigger: GGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCT...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGCCTTCATGGTCTCGATaGTGCTCCTCAGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEPSWSR*CSSARG
Trigger: TCCGCGAGCTGAGGAGCATCATCGAGACCATGAAGG...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGGAAGGGGTTACAAGTaGGCAAGGCAAATGACATTA +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTGRGYK*ARQMTL
Trigger: TAATGTCATTTGCCTTGCTCACTTGTAACCCCTTCC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGCTCCACCCCTACCCCTaGACAGTCTCGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISELHPYP*TVSQYS
Trigger: ACTGTATTGCGAGACTGTTCAGGGGTAGGGGTGGAG...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCGCTCATCCTGGGAAATaGCAAGCTCATCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCAHPGK*QAHPTP
Trigger: GGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGC...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR GCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCCTTCAGACTTGGTGCTaGTTGAGTCACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFLQTWC*LSHPHH
Trigger: GTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAG...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR GCA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATCTTGGGCTGGATTGCTaGAGTTGCCACTGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYLGLDC*SCHCPV
Trigger: AACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAG...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR GCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTTCTTGGGCTGGATTaGTGCAGTTGCCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRFLGLD*CSCHCP
Trigger: GGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAA...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTGGAACACGCCTCGTCTaGCGTTCAGCTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSGTRLV*RSALLP
Trigger: GGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCC...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAGAAGGCACAGATCATTaGAAATACCAGATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEEGTDH*KYQIFS
Trigger: AGAGAAAATCTGGTATTTGCAATGATCTGTGCCTTC...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGATAGCTGCTCATCCTaGGAAATGCCAAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKDSCSS*EMPSSS
Trigger: GGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRDDRSG*RRWLLG
Trigger: CCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATC...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKDDRSG*RRWLLG
Trigger: CCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCCTTCATGGTCTCGATaGTGCTCCTCAGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSPSWSR*CSSARG
Trigger: TCCGCGAGCTGAGGAGCATCATCGAGACCATGAAGG...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACCTCCTCTCTTCAGTTTaGAAAGGTCCCAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYLLSSV*KGPRTP
Trigger: GGGAGTTCTGGGACCTTTTCAAACTGAAGAGAGGAG...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379716.5
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGCTTCAGACTTGGTGCTaGTTGAGTCACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISELQTWC*LSHPHH
Trigger: GTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAG...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAACTGGATTGCTGCAGTTaGCACTGTCCCGTTGGCACC +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKLDCCS*HCPVGT
Trigger: GGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAG...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAACTGGATTGCTGCAGTTaGCACTGTCCCGTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKLDCCS*HCPVGT
Trigger: GGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAG...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTTTCTTGGGCTGGATTaGTGCAGTTGCCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEFLGLD*CSCHCP
Trigger: GGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAA...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCCTTCTCGGGGGCAGTaGGCCAGGTCTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIPSRGQ*ARSAER
Trigger: TCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATGATCTTTGTCCAGGATaGCAGATAGCGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYDLCPG*QIANCR
Trigger: CCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATC...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCTTGGTTTTCCTTCCGTaGCGAACAGAGACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKALVFLP*RTETGS
Trigger: ACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAA...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTTGGTTTTCCTTCCGTaGCGAACAGAGACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISELVFLP*RTETGS
Trigger: ACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAA...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAATGGAATTTGTGTTGTaGTATCAAGACTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGMEFVL*YQDFCA
Trigger: AGCACAAAAGTCTTGATAGCACAACACAAATTCCAT...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAAAGCGGATGGAGGCGGTaGCTTCTTGGGTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKSGWRR*LLGSIP
Trigger: GGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCT...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAATTGGACTGTCACCCCTaGTGTGTGTCAGCGGACCCA +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKLDCHP*CVSADP
Trigger: TGGGTCCGCTGACACACACCAGGGGTGACAGTCCAA...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGAAGATGTGAGGGACTaGGACGGAGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNEDVRD*DGGRLP
Trigger: AGGGAGGCGGCCTCCGTCCCAGTCCCTCACATCTTC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGCCCAGGACTAAACCCTaGGGAAGATTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEPRTKP*GRFSSW
Trigger: CCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGG...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGCAGAATCCTCTTGCTaGGTAGCCCGAGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNAESSC*VARGAA
Trigger: TGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
3UTR CAA 72 bp TGGGTCCATTTTGTAAAGAGTAAAGATGGTGGCAGTTaGGGTAGCGGCTCGTCCAGTTCCTTGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: WVHFVKSKDGGS*GSGSSSSLMQN
Trigger: ATTCTGCATCAAGGAACTGGACGAGCCGCTACCCAAACTGCCACCATCTTTACTCTTTACAAAATGGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGACTGGAGCTTTGTTGGTaGGAGGGTCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRLELCW*EGLSSS
Trigger: AGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAG...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR TCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGCTCCTACCACCTCTATaGTGTCGCCAACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISELLPPL*CRQLSA
Trigger: AGCTGAAAGTTGGCGACATCATAGAGGTGGTAGGAG...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR TCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGTTCCAGTCTTCCCGTTaGGAACACCTTCCCACCATC +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEFQSSR*EHLPTI
Trigger: GATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAA...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR TCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACCTGCTTGTGGTCGGATaGCTGAGTTTCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYLLVVG*LSFSVD
Trigger: ATCTACTGAGAAACTCAGTCATCCGACCACAAGCAG...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGGAAGGGGTTACAAGTaGGCAAGGCAAATGACATTA +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKGRGYK*ARQMTL
Trigger: TAATGTCATTTGCCTTGCTCACTTGTAACCCCTTCC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCGGCTACACTTCAACATaGCCCTCCTCCCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCGYTST*PSSHSL
Trigger: AAGAGAATGGGAGGAGGGTCATGTTGAAGTGTAGCC...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAACTCCACCCCTACCCCTaGACAGTCTCGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKLHPYP*TVSQYS
Trigger: ACTGTATTGCGAGACTGTTCAGGGGTAGGGGTGGAG...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAAGCTCATCCTGGGAAATaGCAAGCTCATCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKAHPGK*QAHPTP
Trigger: GGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGC...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACCTTGACTTGGATAGCTaGTCATCCTGGGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYLDLDS*SSWEMP
Trigger: TGGCATTTCCCAGGATGAGCAGCTATCCAAGTCAAG...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGGAACACGCCTCGTCTaGCGTTCAGCTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNGTRLV*RSALLP
Trigger: GGGAAGGAGAGCTGAACGGCAGACGAGGCGTGTTCC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTGCCAGATAGCGAACTaGCGGCCAAGTCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISECQIAN*RPSQSL
Trigger: CAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCA...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGCTTGGGCGGCAGGGATaGTTTGTTGTCAGACACTTG +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNELGRQG*FVVRHL
Trigger: CAAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAG...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCAGGGATGTTTTACGCTaGTCTTGGGAACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKARDVLR*SWEPGT
Trigger: AGTGCCAGGTTCCCAAGAGCAGCGTAAAACATCCCT...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGGATGCAGAATCCTCTTaGTGGGTAGCCCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FVLCYQDFCANLSNRDILDAESS*WVARGA
Trigger: GGCCCCTCGGGCTACCCAGCAAGAGGATTCTGCATC...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCGATAGCTGCTCATCCTaGGAAATGCCAAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKADSCSS*EMPSSS
Trigger: GGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATC...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACATTGGACTGTCACCCCTaGTGTGTGTCAGCGGACCCA +
Preference number: 4 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTLDCHP*CVSADP
Trigger: TGGGTCCGCTGACACACACCAGGGGTGACAGTCCAA...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGTTGTTGTCAGACACTTaGGATATGGTAACAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGLLSDT*DMVTVL
Trigger: CAAGACTGTTACCATATCCCAAGTGTCTGACAACAA...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAATCTCTCGTTTCTGCTaGTCCTTCATGGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRISRFC*SFMVSM
Trigger: CATCGAGACCATGAAGGACCAGCAGAAACGAGAGAT...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCTTTCTCTTAGGGTGGTaGGGTTTGCTGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSFLLGW*GLLAGK
Trigger: TTTCCCTGCCAGCAAACCCCACCACCCTAAGAGAAA...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTTTCTCTTAGGGTGGTaGGGTTTGCTGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEFLLGW*GLLAGK
Trigger: TTTCCCTGCCAGCAAACCCCACCACCCTAAGAGAAA...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGTCCCAGAACTCCCCTaGAATCCTCCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKVPELP*NPPTSF
Trigger: GAAGGAAGTGGGAGGATTCCAGGGGAGTTCTGGGAC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379716.5
3UTR CAA 72 bp TTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTaGCTCTGTGTAAGTCACAACGAGTGCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRSQSRKAFSTI*LCVSHNECQPQ
Trigger: CTGGGGCTGGCACTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTTTCCAGTCTTCCCGTTaGGAACACCTTCCCACCATC +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSFQSSR*EHLPTI
Trigger: GATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAA...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR TCA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATAGGCAGCTCTTAGCCTaGAGCAAAAGAAAAGGACAC +
Preference number: 4 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYRQLLA*SKRKGH
Trigger: GTGTCCTTTTCTTTTGCTTCAGGCTAAGAGCTGCCT...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAACACCTTCAGACTTGGTaGTGCTTGAGTCACCCCCAT +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKHLQTW*CLSHPH
Trigger: ATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTG...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGGATCTTTGTCCAGGATaGCAGATAGCGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRDLCPG*QIANCR
Trigger: CCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATC...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAACTTGGGCGGCAGGGATaGTTTGTTGTCAGACACTTG +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKLGRQG*FVVRHL
Trigger: CAAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAG...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCTCGTTCACTTCCATCTaGAACCGAAGCCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCSFTSI*NRSRIF
Trigger: GAAAATCCGGCTTCGGTTGCAGATGGAAGTGAACGA...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTGTTCACGCAAAAGGTaGAAAGGACAGAAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISECSRKR*KGQKAG
Trigger: CCCTGCTTTCTGTCCTTTGCACCTTTTGCGTGAACA...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCTCTACATTCCATGTTaGCAGTGTTCCATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFLYIPC*QCSMRV
Trigger: CACCCTCATGGAACACTGGCAACATGGAATGTAGAG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCCCTTAAACTTGACTTaGATAGCTGCTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFPLNLT*IAAHPG
Trigger: CCCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGGACTGTCACCCCTaGTGTGTGTCAGCGGACCCA +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDILDCHP*CVSADP
Trigger: TGGGTCCGCTGACACACACCAGGGGTGACAGTCCAA...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGGCCAAGTCAATCTTTaGACTGTCACCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKGQVNL*TVTPGV
Trigger: CACACCAGGGGTGACAGTCCAAAGATTGACTTGGCC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAACCTCCCTGTAGCTTTTaGTCTGCTTGTGGTCGGATG +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKPPCSF*SACGRM
Trigger: CATCCGACCACAAGCAGACCAAAAGCTACAGGGAGG...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACAACAGAGACGGGGAGTTaGCTCTGTGTCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTTETGS*LCVQLF
Trigger: GAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGT...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTGGTGGTGGGGTTTGCTaGCAGGGAAAGGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIGGGVC*QGKGQV
Trigger: AACCTGTCCCTTTCCCTGCCAGCAAACCCCACCACC...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGCAAGAAAGTTCCAGTaGCTACACTTCAACATGACC +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFARKFQ*LHFNMT
Trigger: GGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTAAGATGGTGGCAGTTTaGGTAGCGGCTCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSKMVAV*VAARPV
Trigger: AACTGGACGAGCCGCTACCCAAACTGCCACCATCTT...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGAGTTTCTCAGTAGATaGTACCACGGAGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEEFLSR*YHGVKT
Trigger: GGTTTTGACTCCGTGGTATCATCTACTGAGAAACTC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGTCCTCTGTGCGCAAGTaGAATGTGTTCCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNESSVRK*NVFLLI
Trigger: GATAAGGAGGAACACATTTCACTTGCGCACAGAGGA...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCAAGGACACTCGCTTCTaGCTACGTGTAGTACAAACA +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKAKDTRF*LRVVQT
Trigger: TGTTTGTACTACACGTAGTCAGAAGCGAGTGTCCTT...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTAAGGACACTCGCTTCTaGCTACGTGTAGTACAAACA +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFKDTRF*LRVVQT
Trigger: TGTTTGTACTACACGTAGTCAGAAGCGAGTGTCCTT...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGCTTGACTTGGATAGCTaGTCATCCTGGGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNELDLDS*SSWEMP
Trigger: TGGCATTTCCCAGGATGAGCAGCTATCCAAGTCAAG...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATCTTGGGCTGGATTGCTaGAGTTGCCACTGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNLGLDC*SCHCPV
Trigger: AACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAG...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAATGCCAGATAGCGAACTaGCGGCCAAGTCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKCQIAN*RPSQSL
Trigger: CAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCA...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGAGTCAATGTCATTGCTaGGGTCCGAGAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: VPLWTKLPEFSFRIEISESQCHC*GPRDLC
Trigger: ACAAAGATCTCTCGGACCGCAGCAATGACATTGACT...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCTAAGTCAATGTCATTaGTGCGGTCCGAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFLSQCH*CGPRDL
Trigger: AAGATCTCTCGGACCGCAGCAATGACATTGACTTAG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATTTAATCTCTCGTTTCTaGTGGTCCTTCATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYLISRF*WSFMVS
Trigger: CGAGACCATGAAGGACCAGCAGAAACGAGAGATTAA...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGATGGAATTTGTGTTGTaGTATCAAGACTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGMEFVL*YQDFCA
Trigger: AGCACAAAAGTCTTGATAGCACAACACAAATTCCAT...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTAGGGATGTTTTACGCTaGTCTTGGGAACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSRDVLR*SWEPGT
Trigger: AGTGCCAGGTTCCCAAGAGCAGCGTAAAACATCCCT...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCAATAATCTCCATAGATaGCTGGTCGAGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSNNLHR*LVESML
Trigger: CAGCATGGACTCGACCAGGCATCTATGGAGATTATT...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGCTGTGTCTGAACTCTaGGCAGGAATAAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKAVSEL*AGISSV
Trigger: CACGGAACTTATTCCTGCCCAGAGTTCAGACACAGC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTGGCACCTTCAGACTTaGTGCTGCTTGAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIWHLQT*CCLSHP
Trigger: GGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCA...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGGAGGCGGTGGCTTCTTaGGTCTATTCCCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILREAVAS*VYSLPF
Trigger: AAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTC...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTATCCTCTTCGGGACTTaGGGAGTCGAAGATATCAGG +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSILFGT*GVEDIR
Trigger: CCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGAT...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGATCTCTCGTTTCTGCTaGTCCTTCATGGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEISRFC*SFMVSM
Trigger: CATCGAGACCATGAAGGACCAGCAGAAACGAGAGAT...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAATTTCTCTTAGGGTGGTaGGGTTTGCTGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKFLLGW*GLLAGK
Trigger: TTTCCCTGCCAGCAAACCCCACCACCCTAAGAGAAA...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAAGCAGGGGTTTAACTTaGCTGATGAAAAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKSRGLT*LMKNQA
Trigger: TGCTTGATTTTTCATCAGCCAAGTTAAACCCCTGCT...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACATTTCAACATTCTCGATaGGTCCATTTTGTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTFQHSR*VHFVKS
Trigger: ACTCTTTACAAAATGGACCCATCGAGAATGTTGAAA...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATCTCATCCGACTCCCCTaGCAGCTCCTTGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNLIRLP*QLLDEV
Trigger: AACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAG...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR TCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAATCCTCTGTGCGCAAGTaGAATGTGTTCCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKSSVRK*NVFLLI
Trigger: GATAAGGAGGAACACATTTCACTTGCGCACAGAGGA...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGTTTTCATTTCGCATTaGGATCTCAGAGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKVFISH*DLRVEK
Trigger: CTTTTCTACTCTGAGATCTCAATGCGAAATGAAAAC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGAGGCAGCTCTTAGCCTaGAGCAAAAGAAAAGGACAC +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRRQLLA*SKRKGH
Trigger: GTGTCCTTTTCTTTTGCTTCAGGCTAAGAGCTGCCT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGCTCGTCCAGTTCCTTaGTGCAGAATCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNARPVP*CRILLL
Trigger: CAGCAAGAGGATTCTGCATCAAGGAACTGGACGAGC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATAATCTCAGACAAGTCTaGGGCACTTGGGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNNLRQV*GTWGFG
Trigger: GCCAAAGCCCCAAGTGCCGCAGACTTGTCTGAGATT...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATCACCTTCAGACTTGGTaGTGCTTGAGTCACCCCCAT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNHLQTW*CLSHPH
Trigger: ATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTG...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR GCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGCTTTGCAGTAATCCTTaGTCTTTGTCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNELCSNP*SLSCCP
Trigger: TGGACAGCAGGACAAAGAGCAAGGATTACTGCAAAG...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGATCTTTGTCCAGGATaGCAGATAGCGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNDLCPG*QIANCR
Trigger: CCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAATCGTTCACTTCCATCTaGAACCGAAGCCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKSFTSI*NRSRIF
Trigger: GAAAATCCGGCTTCGGTTGCAGATGGAAGTGAACGA...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACTTGAATCATGGTAGCTaGATCACAAAAGCTCCAATC +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYLNHGS*ITKAPI
Trigger: GATTGGAGCTTTTGTGATGCAGCTACCATGATTCAA...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCTCTACATTCCATGTTaGCAGTGTTCCATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRLYIPC*QCSMRV
Trigger: CACCCTCATGGAACACTGGCAACATGGAATGTAGAG...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCACTCTCGGAGCCTGTaGTTTCCCTTAAACTTGACT +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRHSRSL*FPLNLT
Trigger: AGTCAAGTTTAAGGGAAACCACAGGCTCCGAGAGTG...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACAGAGGCGGTGGCTTCTTaGGTCTATTCCCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTEAVAS*VYSLPF
Trigger: AAAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTC...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTGGCCAAGTCAATCTTTaGACTGTCACCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIGQVNL*TVTPGV
Trigger: CACACCAGGGGTGACAGTCCAAAGATTGACTTGGCC...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGCCTCCCTGTAGCTTTTaGTCTGCTTGTGGTCGGATG +
Preference number: 4 (lower is better)
Translates to: FVLCYQDFCANLSNRDILPPCSF*SACGRM
Trigger: CATCCGACCACAAGCAGACCAAAAGCTACAGGGAGG...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTATCTCTCGTTTCTGCTaGTCCTTCATGGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSISRFC*SFMVSM
Trigger: CATCGAGACCATGAAGGACCAGCAGAAACGAGAGAT...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: INARKFQWLHFNMTLLPFDSPLG*NLCCAI
Trigger: GATAGCACAACACAAATTCCATCCAAGAGGAGAATC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATCCCAGGACTAAACCCTaGGGAAGATTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNPRTKP*GRFSSW
Trigger: CCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGG...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTAGTCAAACTCCACTATaGCCTCCACCATTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDISQTPL*PPPLAS
Trigger: CGACGCCAATGGTGGAGGCCATAGTGGAGTTTGACT...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR TCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACACTGCTTGTGGTCGGATaGCTGAGTTTCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTLLVVG*LSFSVD
Trigger: ATCTACTGAGAAACTCAGTCATCCGACCACAAGCAG...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGAAGGACACTCGCTTCTaGCTACGTGTAGTACAAACA +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRKDTRF*LRVVQT
Trigger: TGTTTGTACTACACGTAGTCAGAAGCGAGTGTCCTT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAAGTGAGCAAGGCAAATaGCATTATGTGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRSEQGK*HYVNTV
Trigger: AACTGTATTCACATAATGTCATTTGCCTTGCTCACT...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACAGTGAGCAAGGCAAATaGCATTATGTGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYSEQGK*HYVNTV
Trigger: AACTGTATTCACATAATGTCATTTGCCTTGCTCACT...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCAGACAAAGCAGCTTTTaGGAAACACATCCAACATCT +
Preference number: 4 (lower is better)
Translates to: GLNCLSFHFALRSQSRKARQSSF*ETHPTS
Trigger: AGATGTTGGATGTGTTTCTCAAAAGCTGCTTTGTCT...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAACTTTGCAGTAATCCTTaGTCTTTGTCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKLCSNP*SLSCCP
Trigger: TGGACAGCAGGACAAAGAGCAAGGATTACTGCAAAG...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCTTTGCAGTAATCCTTaGTCTTTGTCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSLCSNP*SLSCCP
Trigger: TGGACAGCAGGACAAAGAGCAAGGATTACTGCAAAG...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTTTAATCTCTCGTTTCTaGTGGTCCTTCATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSLISRF*WSFMVS
Trigger: CGAGACCATGAAGGACCAGCAGAAACGAGAGATTAA...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGAATAATCTCCATAGATaGCTGGTCGAGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRNNLHR*LVESML
Trigger: CAGCATGGACTCGACCAGGCATCTATGGAGATTATT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACACACTCTCGGAGCCTGTaGTTTCCCTTAAACTTGACT +
Preference number: 4 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTHSRSL*FPLNLT
Trigger: AGTCAAGTTTAAGGGAAACCACAGGCTCCGAGAGTG...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTTTGTTGTCAGACACTTaGGATATGGTAACAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFLLSDT*DMVTVL
Trigger: CAAGACTGTTACCATATCCCAAGTGTCTGACAACAA...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAAAAATAGTACCACTATaGACTAAACTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKKIVPL*TKLPEF
Trigger: AAACTCAGGCAGTTTAGTCCATAGTGGTACTATTTT...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATATTTCTGGCTGTGTCTaGACTCTGGGCAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNISGCV*TLGRNK
Trigger: CTTATTCCTGCCCAGAGTTCAGACACAGCCAGAAAT...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS-3UTR TCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATCTGCTTGTGGTCGGATaGCTGAGTTTCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNLLVVG*LSFSVD
Trigger: ATCTACTGAGAAACTCAGTCATCCGACCACAAGCAG...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTGAAGGCACAGATCATTaGAAATACCAGATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFEGTDH*KYQIFS
Trigger: AGAGAAAATCTGGTATTTGCAATGATCTGTGCCTTC...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCCCTTAAACTTGACTTaGATAGCTGCTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIPLNLT*IAAHPG
Trigger: CCCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEDSPLG*NLCCAI
Trigger: GATAGCACAACACAAATTCCATCCAAGAGGAGAATC...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGGGAAGATTCTCCTCTTaGATGGAATTTGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRGRFSS*MEFVLC
Trigger: GCACAACACAAATTCCATCCAAGAGGAGAATCTTCC...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGAGTTTCTCAGTAGATaGTACCACGGAGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNEFLSR*YHGVKT
Trigger: GGTTTTGACTCCGTGGTATCATCTACTGAGAAACTC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGAGACAAAGCAGCTTTTaGGAAACACATCCAACATCT +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRRQSSF*ETHPTS
Trigger: AGATGTTGGATGTGTTTCTCAAAAGCTGCTTTGTCT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATAGTCAATGTCATTGCTaGGGTCCGAGAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNSQCHC*GPRDLC
Trigger: ACAAAGATCTCTCGGACCGCAGCAATGACATTGACT...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCTAAGTCAATGTCATTaGTGCGGTCCGAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDILSQCH*CGPRDL
Trigger: AAGATCTCTCGGACCGCAGCAATGACATTGACTTAG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCACTATGGACTAAACTaGCTGAGTTTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRHYGLN*LSFHFA
Trigger: TGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTG...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGTTGTTGTCAGACACTTaGGATATGGTAACAGTCTTG +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRLLSDT*DMVTVL
Trigger: CAAGACTGTTACCATATCCCAAGTGTCTGACAACAA...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGATTCTCCTCTTGGATaGAATTTGTGTTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKDSPLG*NLCCAI
Trigger: GATAGCACAACACAAATTCCATCCAAGAGGAGAATC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACAGGAAGATTCTCCTCTTaGATGGAATTTGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTGRFSS*MEFVLC
Trigger: GCACAACACAAATTCCATCCAAGAGGAGAATCTTCC...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCAAAATAGTACCACTATaGACTAAACTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSKIVPL*TKLPEF
Trigger: AAACTCAGGCAGTTTAGTCCATAGTGGTACTATTTT...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGAGCAGGGGTTTAACTTaGCTGATGAAAAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRSRGLT*LMKNQA
Trigger: TGCTTGATTTTTCATCAGCCAAGTTAAACCCCTGCT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAAGTTTTCATTTCGCATTaGGATCTCAGAGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKVFISH*DLRVEK
Trigger: CTTTTCTACTCTGAGATCTCAATGCGAAATGAAAAC...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGTTTCAACATTCTCGATaGGTCCATTTTGTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEFQHSR*VHFVKS
Trigger: ACTCTTTACAAAATGGACCCATCGAGAATGTTGAAA...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCACTATGGACTAAACTaGCTGAGTTTTCATTTCGCA +
Preference number: 4 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIHYGLN*LSFHFA
Trigger: TGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR GCA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATTTGAATCATGGTAGCTaGATCACAAAAGCTCCAATC +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDILRQTFNLNHGS*ITKAPI
Trigger: GATTGGAGCTTTTGTGATGCAGCTACCATGATTCAA...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CCA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGAAAATAGTACCACTATaGACTAAACTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VLCYQDFCANLSNRDILRKIVPL*TKLPEF
Trigger: AAACTCAGGCAGTTTAGTCCATAGTGGTACTATTTT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGGTTTTCATTTCGCATTaGGATCTCAGAGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FVLCYQDFCANLSNRDILVFISH*DLRVEK
Trigger: CTTTTCTACTCTGAGATCTCAATGCGAAATGAAAAC...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
3UTR CAA 72 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTaGAGGCAAACCTTTAATCTTTTGGCACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: QDFCANLSNRDI*RQTFNLLAQDY
Trigger: ATAATCTTGTGCCAAAAGATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS GCA 90 bp CTGCTGCCTCTGCTGCTGCTGCCGCTGCTGCCCCGGGGCGACTCCTaGTGCTGCTGTTGCATCGCGGCCCAATGCGCCCGGCTGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LLPLLLLPLLPRGDS*CCCCIAAQCARLRR
Trigger: CCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGGCAGCAGCGGCAGCAGCAGCAGAGGCAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS GCA 90 bp CTGCTGCTGCCGCTGCTGCCCCGGGGCGACTCCTGCTGCTGCTGTTaGATCGCGGCCCAATGCGCCCGGCTGCGCCGGGTTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLLPLLPRGDSCCCC*IAAQCARLRRVSCS
Trigger: GGAGCAGGAAACCCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGGCAGCAGCGGCAGCAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS GCA 90 bp CCTCTGCTGCTGCTGCCGCTGCTGCCCCGGGGCGACTCCTGCTGCTaGTGTTGCATCGCGGCCCAATGCGCCCGGCTGCGCCGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: PLLLLPLLPRGDSCC*CCIAAQCARLRRVS
Trigger: GGAAACCCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGGCAGCAGCGGCAGCAGCAGCAGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS CCA 90 bp GCGCCGCTGAGGACAGAGGGGCTGGCCCACCGCCACCTGCTGCCATaGTCCCCGGCTTGGGCGGCAGGGATGCTTTGTTGTCAGACACTT +
Preference number: 5 (lower is better)
Translates to: APLRTEGLAHRHLLP*SPAWAAGMLCCQTL
Trigger: AAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGCCCCTCTGTCCTCAGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CCA 90 bp CTCCTCAGCTCGCGGACCTGTGTCCTTAGCTCCTCCACGGCCGCCTaGCTGCTGGCCGCAGGCTCCATCTTTGGTTTTCCTTCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LLSSRTCVLSSSTAA*LLAAGSIFGFPSVP
Trigger: CGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGAGCTAAGGACACAGGTCCGCGAGCTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS GCA 90 bp GTGTGTCAGCGGACCCACCGGTCTCTCCGGCCTTCTCGGGGGCAGTaGGCCAGGTCTGCTGAGAGAATTGGTCTTAGGTGGCCGAGGCTT +
Preference number: 5 (lower is better)
Translates to: VCQRTHRSLRPSRGQ*ARSAERIGLRWPRL
Trigger: AAGCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGGCCGGAGAGACCGGTGGGTCCGCTGACACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS-3UTR CAA 90 bp AAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCCTATGGCCTCCACCATaGGCGTCGAGCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KEGHATCISRLKGSWPCFLWPPP*ASSRAG
Trigger: CCCGGCCCGGCTCGACGCCAATGGTGGAGGCCATAG...GAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS GCA 90 bp CCGCCTGGCTGCTGGCCGCAGGCTCCATCTTTGGTTTTCCTTCCGTaGCGAACAGAGACGGGGAGTTGGCTCTGTGTCCAGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PPGCWPQAPSLVFLP*RTETGSWLCVQLFP
Trigger: TGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAGCCATGGTCCCCGGCTaGGGCGGCAGGGATGCTTTG +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEAMVPG*GGRDAL
Trigger: CAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGC...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CATCCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGGGTCTGCTGAGAGAATaGGTCTTAGGTGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: HPGGQRGTRHLHFQAEGQGLLRE*VLGGRG
Trigger: GCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACC...CTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS GCA 90 bp GGATTGCTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGACTTGGTaGTGCTTGAGTCACCCCCATCACTCTCGGAGCCTGTGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: GLLQLPLSRWHLQTW*CLSHPHHSRSLWFP
Trigger: GGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS-3UTR CAA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGGAAGGGCAGTTGGCCTaGCTTCTAATAAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QGDKEGHATCISRLKGSWEGQLA*LLIRPR
Trigger: CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTC...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS CCA 90 bp GCTGGATTGCTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGACTTaGTGCTGCTTGAGTCACCCCCATCACTCTCGGAGCCTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: AGLLQLPLSRWHLQT*CCLSHPHHSRSLWF
Trigger: AAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS-3UTR CAA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGGCTGGATTGCTGCAGTaGCCACTGTCCCGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRAGLLQ*PLSRWH
Trigger: GTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGC...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCCTTTCTTGGGCTGGATaGCTGCAGTTGCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: DKEGHATCISRLKGSWPCLSWAG*LQLPLS
Trigger: GGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAG...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCGGAGGCGGTGGCTTCTaGGGTCTATTCCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: DKEGHATCISRLKGSWPCGGGGF*GLFPSF
Trigger: AAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCC...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp CCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGGAGACCTTCAGGCCTaGACTTGGATAGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PGGQRGTRHLHFQAEGQLGDLQA*TWIAAH
Trigger: ATGAGCAGCTATCCAAGTCAAGGCCTGAAGGTCTCC...CAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCAGGCTGAAGGGCAGTaGGCCTTGCTTCTAATAAGG +
Preference number: 5 (lower is better)
Translates to: QGDKEGHATCISRLKGSWQAEGQ*ALLLIR
Trigger: CCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTG...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS GCA 90 bp TTGCTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGACTTGGTGCTaGTTGAGTCACCCCCATCACTCTCGGAGCCTGTGGTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: LLQLPLSRWHLQTWC*LSHPHHSRSLWFPL
Trigger: TAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS-3UTR CAA 90 bp CACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAGTGGTGCCTGCCCCTaGTTTGATGACAGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: HLHFQAEGQLALLLIRPRSGACP*FDDRSG
Trigger: TCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACT...CCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp ACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGGTGGCCGAGGCTTTTTaGGCGGTATGGCAGGAACGG +
Preference number: 5 (lower is better)
Translates to: TRHLHFQAEGQLALLLIRVAEAF*AVWQER
Trigger: CCGTTCCTGCCATACCGCCAAAAAAGCCTCGGCCAC...CCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGGTCTGCTGAGAGAATaGGTCTTAGGTGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGGLLRE*VLGGRG
Trigger: GCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAGGTCTGCTGAGAGAATaGGTCTTAGGTGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEGLLRE*VLGGRG
Trigger: GCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACC...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GCAGAATCCTCTTGCTGGGTAGCCCGAGGGGCCGCAATGAAGCTAGACATACCACGGTCCGAGAGATCTTaGTCCAGGATGCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: AESSCWVARGAAMKLDIPRSERS*SRMPDS
Trigger: GCTATCTGGCATCCTGGACAAAGATCTCTCGGACCG...TGGTATGTCTAGCTTCATTGCGGCCCCTCGGGCTACCCAGCAAGAGGATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACCGCAGGCTCCATCTTaGGTTTTCCTTCCGTGCCGA +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEPQAPS*VFLPCR
Trigger: TCGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS GCA 90 bp TGCTGCGGTCCGAGAGATCTTTGTCCAGGATGCCAGATAGCGAACTaGCGGCCAAGTCAATCTTTGGACTGTCACCCCTGGTGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: CCGPRDLCPGCQIAN*RPSQSLDCHPWCVS
Trigger: TGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CCA 90 bp TTTTCTCTCAGTGGTGCCTGCCCCTTGTTTGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGGTCTCCTGATGGCTGGGTAACCTTT +
Preference number: 5 (lower is better)
Translates to: FSLSGACPLFDDRSG*RRWLLGSPDGWVTF
Trigger: AAAGGTTACCCAGCCATCAGGAGACCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACTGAGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477102.1
CDS-3UTR CAA 90 bp GACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTCCCCTGACAGCTCCTaGATGAAGTTGGAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: DKEGHATCISRLKGSWPCSPDSS*MKLEGN
Trigger: GTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGA...GCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACAGACTTGGTGCTGCTaGAGTCACCCCCATCACTCT +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEQTWCC*SHPHHS
Trigger: AGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp AGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTGAGCGTTGCCACTGTCCCGTaGGCACCTTCAGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: RAVGLASNKAQEKPLCVSVATVP*APSDLV
Trigger: CACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAAC...GCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACTTTCTTGGGCTGGATaGCTGCAGTTGCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMELSWAG*LQLPLS
Trigger: GGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp AGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTGAGCGTGCCTGCCCCTTGTTaGATGACAGGAGCGGATGGA +
Preference number: 5 (lower is better)
Translates to: RAVGLASNKAQEKPLCVSVPAPC*MTGADG
Trigger: TCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCAC...GCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGACGGTCCGAGAGATCTTaGTCCAGGATGCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGRSERS*SRMPDS
Trigger: GCTATCTGGCATCCTGGACAAAGATCTCTCGGACCG...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp AGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTGAGCAAACCTCTCCTGCCGTaGATCTGTCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: RAVGLASNKAQEKPLCVSKPLLP*ICPSHQ
Trigger: CTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTT...GCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGCAGACTTGGTGCTGCTaGAGTCACCCCCATCACTCT +
Preference number: 5 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVQTWCC*SHPHHS
Trigger: AGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTG...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTTGGCACCTTCAGACTaGGTGCTGCTTGAGTCACCC +
Preference number: 5 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVLAPSD*VLLESP
Trigger: GGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAA...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACAGCTGGATTGCTGCAGTaGCCACTGTCCCGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTAGLLQ*PLSRWH
Trigger: GTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGC...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CAA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGCCATGGTCCCCGGCTaGGGCGGCAGGGATGCTTTG +
Preference number: 5 (lower is better)
Translates to: INARKFQWLHFNMTLLPFAMVPG*GGRDAL
Trigger: CAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGCTGGGGCAGAAAATTaGAGTCTCGGACTCAGGATG +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGAGAEN*SLGLRM
Trigger: CATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS TCA 90 bp CAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTaGGCAGGGCCTAAATGCTGGGTACCCAGTCCTCATGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: QLALLLIRPRKNPCV*AGPKCWVPSPHETH
Trigger: GTGGGTTTCATGAGGACTGGGTACCCAGCATTTAGGCCCTGCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS GCA 90 bp AATGTCTCCAAAGCCCACTCCCTTAACTTTCTTGGGCTGGATTGCTaGAGTTGCCACTGTCCCGTTGGCACCTTCAGACTTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NVSKAHSLNFLGLDC*SCHCPVGTFRLGAA
Trigger: AGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGGCTTTTCTGGAGCTTaGTTGGTGAGAGGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGGFSGA*LVRGSF
Trigger: GAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGCGCTCGCCTCTCTTATaGGTTCTTAAAATCGTTTCA +
Preference number: 5 (lower is better)
Translates to: PGGQRGTRHLHFQAEGQLRSPLL*VLKIVS
Trigger: TGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCG...CAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGGAAGACCAAGGTGTTaGGGCTCCTTAAATACTCGG +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGGRPRC*GSLNTR
Trigger: CCGAGTATTTAAGGAGCCCAAACACCTTGGTCTTCC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS TCA 90 bp GACGGAGGCCGCCTCCCTGTAGCTTTTGGTCTGCTTGTGGTCGGATaGCTGAGTTTCTCAGTAGATGATACCACGGAGTCAAAACCTTCT +
Preference number: 5 (lower is better)
Translates to: DGGRLPVAFGLLVVG*LSFSVDDTTESKPS
Trigger: AGAAGGTTTTGACTCCGTGGTATCATCTACTGAGAAACTCAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCGGCCTCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CCA 90 bp GAGCCTGTGGTTTCCCTTAAACTTGACTTGGATAGCTGCTCATCCTaGGAAATGCCAAGCTCATCCGACTCCCCTGACAGCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: EPVVSLKLDLDSCSS*EMPSSSDSPDSSLM
Trigger: CATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGGAAACCACAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS-3UTR CAA 90 bp GCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGGGCTTTTCTGGAGCTTaGTTGGTGAGAGGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: AEGQLALLLIRPRKNPCVGFSGA*LVRGSF
Trigger: GAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCC...CACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp CCAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGACCTTGGTCTTAGTTaGATTGGCTTGTCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: PGGQRGTRHLHFQAEGQLDLGLS*IGLSLK
Trigger: TTTCAAAGACAAGCCAATCAAACTAAGACCAAGGTC...CAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp AGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAAGTAATCCTTGCTCTTaGTCCTGCTGTCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: RGTRHLHFQAEGQLALLLSNPCS*SCCPFL
Trigger: CAGAAATGGACAGCAGGACAAAGAGCAAGGATTACT...TAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp CAGGGGGACAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGTCGATGCAGTCCTTATaGATGAGAGTGACTATATCT +
Preference number: 5 (lower is better)
Translates to: QGDKEGHATCISRLKGSWSMQSL*MRVTIS
Trigger: AGATATAGTCACTCTCATCAATAAGGACTGCATCGA...CCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTGTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATCTAAGTCAATGTCATaGCTGCGGTCCGAGAGATCT +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGSKSMS*LRSERS
Trigger: AGATCTCTCGGACCGCAGCAATGACATTGACTTAGA...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATCTTGGAAGTTTTCTTaGACGCGTCCACTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGSWKFS*TRPLLC
Trigger: ACAGAGGAGTGGACGCGTCAAAGAAAACTTCCAAGA...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGGCCATGGTCCCCGGCTaGGGCGGCAGGGATGCTTTG +
Preference number: 5 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEAMVPG*GGRDAL
Trigger: CAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGC...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAACTATGGCCTCCACCATaGGCGTCGAGCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKLWPPP*ASSRAG
Trigger: CCCGGCCCGGCTCGACGCCAATGGTGGAGGCCATAG...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS GCA 90 bp CTAAGTCAATGTCATTGCTGCGGTCCGAGAGATCTTTGTCCAGGATaGCAGATAGCGAACTGCCGGCCAAGTCAATCTTTGGACTGTCAC +
Preference number: 5 (lower is better)
Translates to: LSQCHCCGPRDLCPG*QIANCRPSQSLDCH
Trigger: GTGACAGTCCAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCAATGACATTGACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGTTGCCACTGTCCCGTaGGCACCTTCAGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKVATVP*APSDLV
Trigger: CACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAAC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAAGAGGGACACGCCACCTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTTTGATTGGCTTGTCTTaGAAAATGTCTCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QRGTRHLHFQAEGQLALLLIGLS*KMSPKP
Trigger: GGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAA...AAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAGGTGGCGTGTCCCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAAGTAATCCTTGCTCTTaGTCCTGCTGTCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMESNPCS*SCCPFL
Trigger: CAGAAATGGACAGCAGGACAAAGAGCAAGGATTACT...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAATCCTCCTTCCTGATGTaGGTGATGATTTCACCCACG +
Preference number: 5 (lower is better)
Translates to: LHFQAEGQLALLLIRPRKSSFLM*VMISPT
Trigger: CGTGGGTGAAATCATCACCAACATCAGGAAGGAGGA...TTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp AGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTGAGCTTTTCTGGAGCTTTGTaGGTGAGAGGGTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RAVGLASNKAQEKPLCVSFSGAL*VRGSFF
Trigger: GAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAA...GCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAATGGTTTCCCTTAAACTaGACTTGGATAGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEWFPLN*TWIAAH
Trigger: ATGAGCAGCTATCCAAGTCAAGTTTAAGGGAAACCA...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAGTTGCCACTGTCCCGTaGGCACCTTCAGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRVATVP*APSDLV
Trigger: CACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAAC...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CTGCATTTCCAGGCTGAAGGGCAGTTGGCCTTGCTTCTAATAAGGCCCAGGAAAACTCCCTTAACTTTCTaGGGCTGGATTGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: LHFQAEGQLALLLIRPRKTPLTF*GWIAAV
Trigger: AACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGT...TTTCCTGGGCCTTATTAGAAGCAAGGCCAACTGCCCTTCAGCCTGGAAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS-3UTR CAA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACGTGCCTGCCCCTTGTTaGATGACAGGAGCGGATGGA +
Preference number: 5 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYVPAPC*MTGADG
Trigger: TCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCAC...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTGTGGCCGAGGCTTTTTaGGCGGTATGGCAGGAACGG +
Preference number: 5 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFVAEAF*AVWQER
Trigger: CCGTTCCTGCCATACCGCCAAAAAAGCCTCGGCCAC...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCGTGGCCGAGGCTTTTTaGGCGGTATGGCAGGAACGG +
Preference number: 5 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSVAEAF*AVWQER
Trigger: CCGTTCCTGCCATACCGCCAAAAAAGCCTCGGCCAC...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCGTGGCCGAGGCTTTTTaGGCGGTATGGCAGGAACGG +
Preference number: 5 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCVAEAF*AVWQER
Trigger: CCGTTCCTGCCATACCGCCAAAAAAGCCTCGGCCAC...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAACGGCCAAGTCAATCTTaGGACTGTCACCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKRPSQS*DCHPWC
Trigger: ACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCG...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGAAGACATATCCTCTTCGGGACTaGGGGAGTCGAAGATATCAG +
Preference number: 5 (lower is better)
Translates to: LLPLLIQRKPMASMRGKTYPLRD*GSRRYQ
Trigger: CTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATA...TGTCTTCCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGGCGGCAGGGATGCTTaGTTGTCAGACACTTGGGAT +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKGGRDA*LSDTWD
Trigger: ATCCCAAGTGTCTGACAACAAAGCATCCCTGCCGCC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGACCGCAGGCTCCATCTTaGGTTTTCCTTCCGTGCCGA +
Preference number: 5 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRPQAPS*VFLPCR
Trigger: TCGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGG...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAACCTCTTGGATGGAATTaGTGTTGTGCTATCAAGACT +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMEPLGWN*CCAIKT
Trigger: AGTCTTGATAGCACAACACAAATTCCATCCAAGAGG...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAGCCTTTAGCACAATTTaGCTCTGTGTAAGTCACAAC +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGAFSTI*LCVSHN
Trigger: GTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGC...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGAAAGCAGGGGTTTAACTaGGCTGATGAAAAATCAAGC +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGKQGFN*ADEKSS
Trigger: GCTTGATTTTTCATCAGCCAAGTTAAACCCCTGCTT...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS CCA 90 bp GTTCTGGAAGTAAGTCTCAGCTTGATTTTCAGCAATTCTGGACTTTaGGAGACCTCCTCCACACATCCCACTAAGTTCTCTGGCGGTGTC +
Preference number: 5 (lower is better)
Translates to: VLEVSLSLIFSNSGL*ETSSTHPTKFSGGV
Trigger: GACACCGCCAGAGAACTTAGTGGGATGTGTGGAGGAGGTCTCCCAAAGTCCAGAATTGCTGAAAATCAAGCTGAGACTTACTTCCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477102.1
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGCGGCACTTGGGGCTTaGGCTGCTGAAACCTCCATT +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEAALGA*AAETSI
Trigger: AATGGAGGTTTCAGCAGCCAAAGCCCCAAGTGCCGC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS-3UTR CAA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGTCCCTTAAACTTGACTaGGATAGCTGCTCATCCTGG +
Preference number: 5 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGSLKLD*DSCSSW
Trigger: CCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGGA...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTGGCACCTTCAGACTaGGTGCTGCTTGAGTCACCC +
Preference number: 5 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRLAPSD*VLLESP
Trigger: GGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAA...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGAGGAGGCGGTGGCTTCTaGGGTCTATTCCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRGGGGF*GLFPSF
Trigger: AAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCC...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTGTGCCTGCCCCTTGTTaGATGACAGGAGCGGATGGA +
Preference number: 5 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFVPAPC*MTGADG
Trigger: TCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCAC...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGAGTGGTGCCTGCCCCTaGTTTGATGACAGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISESGACP*FDDRSG
Trigger: TCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACT...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCAGTGGTGCCTGCCCCTaGTTTGATGACAGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCSGACP*FDDRSG
Trigger: TCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACT...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCGGTCTGCTGAGAGAATaGGTCTTAGGTGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKAGLLRE*VLGGRG
Trigger: GCCTCGGCCACCTAAGACCAATTCTCTCAGCAGACC...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCACAACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATTTGTTGTCAGACACTaGGGATATGGTAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: SQRVPAPGLNPGEDSPLGFVVRH*GYGNSL
Trigger: AAGACTGTTACCATATCCCAAGTGTCTGACAACAAA...TCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTGGGAAGATTCTCCTCTaGGATGGAATTTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LLLGPLARVREALKTVASGKILL*DGICVV
Trigger: CACAACACAAATTCCATCCAAGAGGAGAATCTTCCC...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp ACGAGTGCCAGCCCCAGGACTAAACCCTGGGGAAGATTCTCCTCTTGGATGGAAAGAAGGCACAGATCATaGCAAATACCAGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: TSASPRTKPWGRFSSWMERRHRS*QIPDFL
Trigger: GAGAAAATCTGGTATTTGCAATGATCTGTGCCTTCT...TTCCATCCAAGAGGAGAATCTTCCCCAGGGTTTAGTCCTGGGGCTGGCACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTTGGCCTCTAGTGGACTaGGATAAGTGGCAGATTTTT +
Preference number: 5 (lower is better)
Translates to: LLLGPLARVREALKTVASWPLVD*DKWQIF
Trigger: AAAAATCTGCCACTTATCCAAGTCCACTAGAGGCCA...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTGGAGGCGGTGGCTTCTaGGGTCTATTCCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFGGGGF*GLFPSF
Trigger: AAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCC...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCGGCCAAGTCAATCTTaGGACTGTCACCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFRPSQS*DCHPWC
Trigger: ACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTAACGCAGAAATGCTTATAACTGTCAAGGGGTACAGGGATGTTTTACGCTGCCGGCCAAGTCAATCTTaGGACTGTCACCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: FNAEMLITVKGYRDVLRCRPSQS*DCHPWC
Trigger: ACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCG...GCAGCGTAAAACATCCCTGTACCCCTTGACAGTTATAAGCATTTCTGCGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAATATCCTCTTCGGGACTaGGGGAGTCGAAGATATCAG +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKYPLRD*GSRRYQ
Trigger: CTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATA...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGCCGCAGGCTCCATCTTaGGTTTTCCTTCCGTGCCGA +
Preference number: 5 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEPQAPS*VFLPCR
Trigger: TCGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGG...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATCACTTCTCCCTCTCCTTATACAAAGGAAGCCAATGGCCTCTATGAGGGGGGGGAAGATTCTCCTCTaGGATGGAATTTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: ESLLPLLIQRKPMASMRGGKILL*DGICVV
Trigger: CACAACACAAATTCCATCCAAGAGGAGAATCTTCCC...CCCCCTCATAGAGGCCATTGGCTTCCTTTGTATAAGGAGAGGGAGAAGTGATTC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTAAGCAGGGGTTTAACTaGGCTGATGAAAAATCAAGC +
Preference number: 5 (lower is better)
Translates to: LLLGPLARVREALKTVASKQGFN*ADEKSS
Trigger: GCTTGATTTTTCATCAGCCAAGTTAAACCCCTGCTT...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGGAAGACCAAGGTGTTaGGGCTCCTTAAATACTCGG +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKGRPRC*GSLNTR
Trigger: CCGAGTATTTAAGGAGCCCAAACACCTTGGTCTTCC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGGCTCGTCCAGTTCCTaGATGCAGAATCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: INARKFQWLHFNMTLLPFGSSSS*MQNPLA
Trigger: AGCAAGAGGATTCTGCATCAAGGAACTGGACGAGCC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS CCA 90 bp AGACAGCAAAGAGTTTCCACTGGGCACTTCGTGCAGGGGCTTTTCTaGAGCTTTGTTGGTGAGAGGGTCTTTCTTCATCTCTTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: RQQRVSTGHFVQGLF*SFVGERVFLHLFLY
Trigger: ATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000397821.8
ENST00000432234.5
CDS-3UTR CAA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGTGCCTGCCCCTTGTTaGATGACAGGAGCGGATGGA +
Preference number: 5 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKVPAPC*MTGADG
Trigger: TCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCAC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGGGCGGCAGGGATGCTTaGTTGTCAGACACTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEGGRDA*LSDTWD
Trigger: ATCCCAAGTGTCTGACAACAAAGCATCCCTGCCGCC...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCGCTGGGGCAGAAAATTaGAGTCTCGGACTCAGGATG +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKAAGAEN*SLGLRM
Trigger: CATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGC...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTCCTCTTAGGACCTTTGGCTAGGGTGAGAGAAGCTTTGAAGACAGTGGCCTCTAGAAGGCACAGATCATaGCAAATACCAGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLLGPLARVREALKTVASRRHRS*QIPDFL
Trigger: GAGAAAATCTGGTATTTGCAATGATCTGTGCCTTCT...AGAGGCCACTGTCTTCAAAGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGCTCCTCTTAGGACCTTaGGCTAGGGTGAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISELLLGP*ARVREA
Trigger: AGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCCTCCTCTTAGGACCTTaGGCTAGGGTGAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSLLLGP*ARVREA
Trigger: AGCTTCTCTCACCCTAGCCAAAGGTCCTAAGAGGAG...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAATCTCTACATTCCATGTaGCCAGTGTTCCATGAGGGT +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKSLHSM*PVFHEG
Trigger: ACCCTCATGGAACACTGGCAACATGGAATGTAGAGA...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGGCTTTTCTGGAGCTTaGTTGGTGAGAGGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEGFSGA*LVRGSF
Trigger: GAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCTCCCCTGACAGCTCCTaGATGAAGTTGGAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKASPDSS*MKLEGN
Trigger: GTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGA...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAGACTTGGTGCTGCTaGAGTCACCCCCATCACTCT +
Preference number: 5 (lower is better)
Translates to: VLCYQDFCANLSNRDILRQTWCC*SHPHHS
Trigger: AGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTG...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGTTGGCACCTTCAGACTaGGTGCTGCTTGAGTCACCC +
Preference number: 5 (lower is better)
Translates to: VLCYQDFCANLSNRDILRLAPSD*VLLESP
Trigger: GGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAA...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGCTGGATTGCTGCAGTaGCCACTGTCCCGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNAGLLQ*PLSRWH
Trigger: GTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAACTTTCTTGGGCTGGATaGCTGCAGTTGCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKLSWAG*LQLPLS
Trigger: GGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAG...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGGCAGGGATGCTTTGTaGTCAGACACTTGGGATATG +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEGRDAL*SDTWDM
Trigger: CATATCCCAAGTGTCTGACAACAAAGCATCCCTGCC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS TCA 90 bp TATTTCAATCTCAGACAAGTCTGCGGCACTTGGGGCTTTGGCTGCTaGAACCTCCATTCTGTGAAGTATGAAATGGTAATTTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: YFNLRQVCGTWGFGC*NLHSVKYEMVISGC
Trigger: ACAGCCAGAAATTACCATTTCATACTTCACAGAATGGAGGTTTCAGCAGCCAAAGCCCCAAGTGCCGCAGACTTGTCTGAGATTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS-3UTR CAA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGTCCCCTGACAGCTCCTaGATGAAGTTGGAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: SQSRKAFSTILLCVSHNESPDSS*MKLEGN
Trigger: GTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGA...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCTCCCTTAAACTTGACTaGGATAGCTGCTCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKASLKLD*DSCSSW
Trigger: CCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGGA...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATAGTGGTGCCTGCCCCTaGTTTGATGACAGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNSGACP*FDDRSG
Trigger: TCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACT...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCTCTAAGTCAATGTCATaGCTGCGGTCCGAGAGATCT +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKASKSMS*LRSERS
Trigger: AGATCTCTCGGACCGCAGCAATGACATTGACTTAGA...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCTCTTGGAAGTTTTCTTaGACGCGTCCACTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKASWKFS*TRPLLC
Trigger: ACAGAGGAGTGGACGCGTCAAAGAAAACTTCCAAGA...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATGGCCTCTAGTGGACTaGGATAAGTGGCAGATTTTT +
Preference number: 5 (lower is better)
Translates to: SLLTTCSTNTREVCDKTRWPLVD*DKWQIF
Trigger: AAAAATCTGCCACTTATCCAAGTCCACTAGAGGCCA...TCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTAAACCTCTCCTGCCGTaGATCTGTCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIKPLLP*ICPSHQ
Trigger: CTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTT...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGACAAGTCTGCGGCACTaGGGGCTTTGGCTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: FVLCYQDFCANLSNRDILTSLRH*GLWLLK
Trigger: TTTCAGCAGCCAAAGCCCCAAGTGCCGCAGACTTGT...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS-3UTR CAA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATTTTTCTGGAGCTTTGTaGGTGAGAGGGTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYFSGAL*VRGSFF
Trigger: GAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAA...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACACTCGCTTCTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAGACCTTGGTCTTAGTTaGATTGGCTTGTCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: GHSLLTTCSTNTREVCDKDLGLS*IGLSLK
Trigger: TTTCAAAGACAAGCCAATCAAACTAAGACCAAGGTC...TTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAGAAGCGAGTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTAGTAATCCTTGCTCTTaGTCCTGCTGTCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFSNPCS*SCCPFL
Trigger: CAGAAATGGACAGCAGGACAAAGAGCAAGGATTACT...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGGAGGCGGTGGCTTCTaGGGTCTATTCCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNGGGGF*GLFPSF
Trigger: AAAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCGGTCCGAGAGATCTTaGTCCAGGATGCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIRSERS*SRMPDS
Trigger: GCTATCTGGCATCCTGGACAAAGATCTCTCGGACCG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp ATAAATGCAAGAAAGTTCCAGTGGCTACACTTCAACATGACCCTCCTCCCATTCGATATGGTAACAGTCTaGGAAGTTTTCTTTGACGCG +
Preference number: 5 (lower is better)
Translates to: INARKFQWLHFNMTLLPFDMVTV*EVFFDA
Trigger: CGCGTCAAAGAAAACTTCCAAGACTGTTACCATATC...GAATGGGAGGAGGGTCATGTTGAAGTGTAGCCACTGGAACTTTCTTGCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGGCGGCAGGGATGCTTaGTTGTCAGACACTTGGGAT +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNGGRDA*LSDTWD
Trigger: ATCCCAAGTGTCTGACAACAAAGCATCCCTGCCGCC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACCCTCTTGGATGGAATTaGTGTTGTGCTATCAAGACT +
Preference number: 5 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYPLGWN*CCAIKT
Trigger: AGTCTTGATAGCACAACACAAATTCCATCCAAGAGG...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp AAGGCAATATATCCAGGGATGGGAATGGAGGGTATGAGGTTTCCTTCCTTATACGAGACAAAGCAGCTTTaGAGAAACACATCCAACATC +
Preference number: 5 (lower is better)
Translates to: KAIYPGMGMEGMRFPSLYETKQL*RNTSNI
Trigger: GATGTTGGATGTGTTTCTCAAAAGCTGCTTTGTCTC...GTATAAGGAAGGAAACCTCATACCCTCCATTCCCATCCCTGGATATATTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTAAGGATGAGAAAACAGTTACATAGTCTAAGGCTGAACTGTTCATGTACTACAGGCTCGTCCAGTTCCTaGATGCAGAATCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LRMRKQLHSLRLNCSCTTGSSSS*MQNPLA
Trigger: AGCAAGAGGATTCTGCATCAAGGAACTGGACGAGCC...TGTAGTACATGAACAGTTCAGCCTTAGACTATGTAACTGTTTTCTCATCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGACTCCCTTAACTTTCTaGGGCTGGATTGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: VLCYQDFCANLSNRDILRTPLTF*GWIAAV
Trigger: AACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGT...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGTCTTGGAAGTTTTCTTaGACGCGTCCACTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VLCYQDFCANLSNRDILRSWKFS*TRPLLC
Trigger: ACAGAGGAGTGGACGCGTCAAAGAAAACTTCCAAGA...CCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGATATGGTAACAGTCTaGGAAGTTTTCTTTGACGCG +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEDMVTV*EVFFDA
Trigger: CGCGTCAAAGAAAACTTCCAAGACTGTTACCATATC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTGGCTGGGGCAGAAAATTTGAGTCTCGGACTCAGGATGAATAATGTGACATTTCCTCTTGGATGGAATTaGTGTTGTGCTATCAAGACT +
Preference number: 5 (lower is better)
Translates to: LAGAENLSLGLRMNNVTFPLGWN*CCAIKT
Trigger: AGTCTTGATAGCACAACACAAATTCCATCCAAGAGG...AAATGTCACATTATTCATCCTGAGTCCGAGACTCAAATTTTCTGCCCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGTAGAAAAGCCGCCTTTAGCACAATTTaGCTCTGTGTAAGTCACAAC +
Preference number: 5 (lower is better)
Translates to: GLNCLSFHFALRSQSRKAAFSTI*LCVSHN
Trigger: GTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGC...GGCTTTTCTACTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATGCCTTTAGCACAATTTaGCTCTGTGTAAGTCACAAC +
Preference number: 5 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYAFSTI*LCVSHN
Trigger: GTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGC...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GTACCACTATGGACTAAACTGCCTGAGTTTTCATTTCGCATTGAGATCTCAGAGGAGACAAAGCAGCTTTaGAGAAACACATCCAACATC +
Preference number: 5 (lower is better)
Translates to: VPLWTKLPEFSFRIEISEETKQL*RNTSNI
Trigger: GATGTTGGATGTGTTTCTCAAAAGCTGCTTTGTCTC...CTCTGAGATCTCAATGCGAAATGAAAACTCAGGCAGTTTAGTCCATAGTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAATCTCTACATTCCATGTaGCCAGTGTTCCATGAGGGT +
Preference number: 5 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKSLHSM*PVFHEG
Trigger: ACCCTCATGGAACACTGGCAACATGGAATGTAGAGA...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGTGGTTTCCCTTAAACTaGACTTGGATAGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEWFPLN*TWIAAH
Trigger: ATGAGCAGCTATCCAAGTCAAGTTTAAGGGAAACCA...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp AAGATAAAGCGGACAGGCAAACATCAGTTTCCTTGGGAAAGAAAAAGCAACTCCTCGATGCAGTCCTTATaGATGAGAGTGACTATATCT +
Preference number: 5 (lower is better)
Translates to: KIKRTGKHQFPWERKSNSSMQSL*MRVTIS
Trigger: AGATATAGTCACTCTCATCAATAAGGACTGCATCGA...GGAGTTGCTTTTTCTTTCCCAAGGAAACTGATGTTTGCCTGTCCGCTTTATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATTATCCTCTTCGGGACTaGGGGAGTCGAAGATATCAG +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNYPLRD*GSRRYQ
Trigger: CTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATA...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATGGCAGGGATGCTTTGTaGTCAGACACTTGGGATATG +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNGRDAL*SDTWDM
Trigger: CATATCCCAAGTGTCTGACAACAAAGCATCCCTGCC...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTGGCAGGGATGCTTTGTaGTCAGACACTTGGGATATG +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIGRDAL*SDTWDM
Trigger: CATATCCCAAGTGTCTGACAACAAAGCATCCCTGCC...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTGGGAAGATTCTCCTCTaGGATGGAATTTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSGKILL*DGICVV
Trigger: CACAACACAAATTCCATCCAAGAGGAGAATCTTCCC...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATAGAAGGCACAGATCATaGCAAATACCAGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYRRHRS*QIPDFL
Trigger: GAGAAAATCTGGTATTTGCAATGATCTGTGCCTTCT...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATTCCTCCTTCCTGATGTaGGTGATGATTTCACCCACG +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNSSFLM*VMISPT
Trigger: CGTGGGTGAAATCATCACCAACATCAGGAAGGAGGA...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAACGCTCGCCTCTCTTATaGGTTCTTAAAATCGTTTCA +
Preference number: 5 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKRSPLL*VLKIVS
Trigger: TGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCG...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTACTCCCTTAACTTTCTaGGGCTGGATTGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDITPLTF*GWIAAV
Trigger: AACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGT...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp CTGACTACGTGTAGTACAAACACTAGGGAAGTCTGTGACAAAACACGATTAAAATTGATTGGCTTGTCTTaGAAAATGTCTCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: LTTCSTNTREVCDKTRLKLIGLS*KMSPKP
Trigger: GGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAA...TTTTAATCGTGTTTTGTCACAGACTTCCCTAGTGTTTGTACTACACGTAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGTCTAAGTCAATGTCATaGCTGCGGTCCGAGAGATCT +
Preference number: 5 (lower is better)
Translates to: FVLCYQDFCANLSNRDILSKSMS*LRSERS
Trigger: AGATCTCTCGGACCGCAGCAATGACATTGACTTAGA...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TGTTCCATGAGGGTGTTCCAACCGCTCAATTTCATCAACAATCCTACTCTGTATATCAACTCTCATTCTTaGTGGCTGTGCAAATCTATT +
Preference number: 5 (lower is better)
Translates to: CSMRVFQPLNFINNPTLYINSHS*WLCKSI
Trigger: AATAGATTTGCACAGCCACAAAGAATGAGAGTTGAT...ATACAGAGTAGGATTGTTGATGAAATTGAGCGGTTGGAACACCCTCATGGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp CAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGGCAAACCTTTAATTTTTCTGGAGCTTTGTaGGTGAGAGGGTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QDFCANLSNRDILRQTFNFSGAL*VRGSFF
Trigger: GAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAA...ATTAAAGGTTTGCCTCAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAAGACCTTGGTCTTAGTTaGATTGGCTTGTCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKDLGLS*IGLSLK
Trigger: TTTCAAAGACAAGCCAATCAAACTAAGACCAAGGTC...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTGAGTAATCCTTGCTCTTaGTCCTGCTGTCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: FVLCYQDFCANLSNRDILSNPCS*SCCPFL
Trigger: CAGAAATGGACAGCAGGACAAAGAGCAAGGATTACT...CAAAATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GCATTGAGATCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTTCGATGCAGTCCTTATaGATGAGAGTGACTATATCT +
Preference number: 5 (lower is better)
Translates to: ALRSQSRKAFSTILLCVSSMQSL*MRVTIS
Trigger: AGATATAGTCACTCTCATCAATAAGGACTGCATCGA...ACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGATCTCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TTTTTGAATCATGGTAGCTGCATCACAAAAGCTCCAATCAAGAGGGTGGTAAAATTTGTTGTCAGACACTaGGGATATGGTAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: FLNHGSCITKAPIKRVVKFVVRH*GYGNSL
Trigger: AAGACTGTTACCATATCCCAAGTGTCTGACAACAAA...TTTTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCATGATTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp TCTCAGAGTAGAAAAGCCTTTAGCACAATTTTGCTCTGTGTAAGTCACAACGAGATCAACTCTCATTCTTaGTGGCTGTGCAAATCTATT +
Preference number: 5 (lower is better)
Translates to: SQSRKAFSTILLCVSHNEINSHS*WLCKSI
Trigger: AATAGATTTGCACAGCCACAAAGAATGAGAGTTGAT...CTCGTTGTGACTTACACAGAGCAAAATTGTGCTAAAGGCTTTTCTACTCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTCGCTCGCCTCTCTTATaGGTTCTTAAAATCGTTTCA +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIRSPLL*VLKIVS
Trigger: TGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCG...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379698.8
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTCGATGCAGTCCTTATaGATGAGAGTGACTATATCT +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDISMQSL*MRVTIS
Trigger: AGATATAGTCACTCTCATCAATAAGGACTGCATCGA...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS-3UTR CAA 90 bp GAATTTGTGTTGTGCTATCAAGACTTTTGTGCTAATCTTTCAAACAGGGACATTTTTGTTGTCAGACACTaGGGATATGGTAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: EFVLCYQDFCANLSNRDIFVVRH*GYGNSL
Trigger: AAGACTGTTACCATATCCCAAGTGTCTGACAACAAA...AATGTCCCTGTTTGAAAGATTAGCACAAAAGTCTTGATAGCACAACACAAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000397821.8
CDS CAA 72 bp GCCGCTGCTGCCCCGGGGCGACTCCTGCTGCTGCTGTaGCATCGCGGCCCAATGCGCCCGGCTGCGCCGGGT +
Preference number: 6 (lower is better)
Translates to: AAAAPGRLLLLL*HRGPMRPAAPG
Trigger: ACCCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGGCAGCAGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS GCA 72 bp CCGCTGCTGCCCCGGGGCGACTCCTGCTGCTGCTGTTaGATCGCGGCCCAATGCGCCCGGCTGCGCCGGGTT +
Preference number: 6 (lower is better)
Translates to: PLLPRGDSCCCC*IAAQCARLRRV
Trigger: AACCCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGGCAGCAGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS GCA 72 bp CTGCTGCTGCTGCCGCTGCTGCCCCGGGGCGACTCCTaGTGCTGCTGTTGCATCGCGGCCCAATGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: LLLLPLLPRGDS*CCCCIAAQCAR
Trigger: CCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGGCAGCAGCGGCAGCAGCAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS GCA 72 bp GGCGACTCCTGCTGCTGCTGTTGCATCGCGGCCCAATaGGCCCGGCTGCGCCGGGTTTCCTGCTCCCCGCGA +
Preference number: 6 (lower is better)
Translates to: GDSCCCCCIAAQ*ARLRRVSCSPR
Trigger: TCGCGGGGAGCAGGAAACCCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397821.8
CDS CCA 72 bp CTGGCCCACCGCCACCTGCTGCCATGGTCCCCGGCTTaGGCGGCAGGGATGCTTTGTTGTCAGACACTTGGG +
Preference number: 6 (lower is better)
Translates to: LAHRHLLPWSPA*AAGMLCCQTLG
Trigger: CCCAAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 72 bp GCTGGCCCACCGCCACCTGCTGCCATGGTCCCCGGCTaGGGCGGCAGGGATGCTTTGTTGTCAGACACTTGG +
Preference number: 6 (lower is better)
Translates to: AGPPPPAAMVPG*GGRDALLSDTW
Trigger: CCAAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS GCA 72 bp CGGACCCACCGGTCTCTCCGGCCTTCTCGGGGGCAGTaGGCCAGGTCTGCTGAGAGAATTGGTCTTAGGTGG +
Preference number: 6 (lower is better)
Translates to: RTHRSLRPSRGQ*ARSAERIGLRW
Trigger: CCACCTAAGACCAATTCTCTCAGCAGACCTGGCGCACTGCCCCCGAGAAGGCCGGAGAGACCGGTGGGTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp GACAGAGGGGCTGGCCCACCGCCACCTGCTGCCATGGTCCCCGGCTaGGGCGGCAGGGATGCTTTGTTGTCAGACACTTGGGATATGGTA +
Preference number: 6 (lower is better)
Translates to: DRGAGPPPPAAMVPG*GGRDALLSDTWDMV
Trigger: TACCATATCCCAAGTGTCTGACAACAAAGCATCCCTGCCGCCCAAGCCGGGGACCATGGCAGCAGGTGGCGGTGGGCCAGCCCCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp TTAGCTCCTCCACGGCCGCCTGGCTGCTGGCCGCAGGCTCCATCTTaGGTTTTCCTTCCGTGCCGAACAGAGACGGGGAGTTGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LAPPRPPGCWPQAPS*VFLPCRTETGSWLC
Trigger: ACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGGCCAGCAGCCAGGCGGCCGTGGAGGAGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS TCA 72 bp TCAGCTCAAGTTCATCGTCATTCTGGGGCAGGTAGCTaGATGCCACCTGGCACCGGCGCCTCCGTCGCTCGC +
Preference number: 6 (lower is better)
Translates to: SAQVHRHSGAGS*MPPGTGASVAR
Trigger: GCGAGCGACGGAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS GCA 72 bp CTCAAGTTCATCGTCATTCTGGGGCAGGTAGCTGAATaGCACCTGGCACCGGCGCCTCCGTCGCTCGCCTCT +
Preference number: 6 (lower is better)
Translates to: LKFIVILGQVAE*HLAPAPPSLAS
Trigger: AGAGGCGAGCGACGGAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000432234.5
CDS GCA 72 bp AACCCACACCGCACCCCTCAACCTCACACTCACTCCTaGCTGAGTGCAGGAGCAAGGACAGAAGTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: NPHRTPQPHTHS*LSAGARTEVAG
Trigger: ACCGGCCACTTCTGTCCTTGCTCCTGCACTCAGGCAGGAGTGAGTGTGAGGTTGAGGGGTGCGGTGTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS GCA 72 bp CTCAAGTTCATCGTCATTCTGGGGCAGGTAGCTGAATaGCACCTGGCACCGGCGCCTCCGTCGCTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: LKFIVILGQVAE*HLAPAPPSLAS
Trigger: AGAAGCGAGCGACGGAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431164.1
CDS CCA 72 bp AGTGGTGCCTGCCCCTTGTTTGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGGTCTCCTGATGGCTGG +
Preference number: 6 (lower is better)
Translates to: SGACPLFDDRSG*RRWLLGSPDGW
Trigger: CCAGCCATCAGGAGACCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477102.1
CDS GCA 72 bp TTGCCACTGTCCCGTTGGCACCTTCAGACTTGGTGCTaGTTGAGTCACCCCCATCACTCTCGGAGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: LPLSRWHLQTWC*LSHPHHSRSLW
Trigger: CCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS GCA 72 bp CAGTTGCCACTGTCCCGTTGGCACCTTCAGACTTGGTaGTGCTTGAGTCACCCCCATCACTCTCGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: QLPLSRWHLQTW*CLSHPHHSRSL
Trigger: CAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS GCA 72 bp TGCTGGCCGCAGGCTCCATCTTTGGTTTTCCTTCCGTaGCGAACAGAGACGGGGAGTTGGCTCTGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: CWPQAPSLVFLP*RTETGSWLCVQ
Trigger: CTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAAAGATGGAGCCTGCGGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 72 bp GCTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGACTaGGTGCTGCTTGAGTCACCCCCATCACTCTCGGAG +
Preference number: 6 (lower is better)
Translates to: AAVATVPLAPSD*VLLESPPSLSE
Trigger: CTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CAA 90 bp GGCTGGATTGCTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGACTaGGTGCTGCTTGAGTCACCCCCATCACTCTCGGAGCCTGTGGTT +
Preference number: 6 (lower is better)
Translates to: GWIAAVATVPLAPSD*VLLESPPSLSEPVV
Trigger: AACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS TCA 72 bp CACTGTCCCGTTGGCACCTTCAGACTTGGTGCTGCTTaGGTCACCCCCATCACTCTCGGAGCCTGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: HCPVGTFRLGAA*VTPITLGACGF
Trigger: GAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CCA 72 bp GAGGGACTGGGACGGAGGCCGCCTCCCTGTAGCTTTTaGTCTGCTTGTGGTCGGATGACTGAGTTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: EGLGRRPPPCSF*SACGRMTEFLS
Trigger: ACTGAGAAACTCAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCGGCCTCCGTCCCAGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 72 bp CCACTGTCCCGTTGGCACCTTCAGACTTGGTGCTGCTaGAGTCACCCCCATCACTCTCGGAGCCTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: PLSRWHLQTWCC*SHPHHSRSLWF
Trigger: AAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CAA 72 bp GGATGCCAGATAGCGAACTGCCGGCCAAGTCAATCTTaGGACTGTCACCCCTGGTGTGTGTCAGCGGACCCA +
Preference number: 6 (lower is better)
Translates to: GCQIANCRPSQS*DCHPWCVSADP
Trigger: TGGGTCCGCTGACACACACCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp CTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGACTTGGTGCTGCTaGAGTCACCCCCATCACTCTCGGAGCCTGTGGTTTCCCTTAAAC +
Preference number: 6 (lower is better)
Translates to: LQLPLSRWHLQTWCC*SHPHHSRSLWFPLN
Trigger: GTTTAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CCA 72 bp AGTGGTGCCTGCCCCTTGTTTGATGACAGGAGCGGATaGAGGCGGTGGCTTCTTGGGTCTATTCCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: SGACPLFDDRSG*RRWLLGSIPFL
Trigger: AAGGAAGGGAATAGACCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATCAAACAAGGGGCAGGCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
ENST00000494961.5
CDS CCA 72 bp TGCCCCTTGTTTGATGACAGGAGCGGATGGAGGCGGTaGCTTCTTGGGTCTCCTGATGGCTGGGTAACCTTT +
Preference number: 6 (lower is better)
Translates to: CPLFDDRSGWRR*LLGSPDGWVTF
Trigger: AAAGGTTACCCAGCCATCAGGAGACCCAAGAAGCCACCGCCTCCATCCGCTCCTGTCATCAAACAAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477102.1
CDS CAA 90 bp CCCTTAACTTTCTTGGGCTGGATTGCTGCAGTTGCCACTGTCCCGTaGGCACCTTCAGACTTGGTGCTGCTTGAGTCACCCCCATCACTC +
Preference number: 6 (lower is better)
Translates to: PLTFLGWIAAVATVP*APSDLVLLESPPSL
Trigger: GAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS GCA 72 bp CCGAGAGATCTTTGTCCAGGATGCCAGATAGCGAACTaGCGGCCAAGTCAATCTTTGGACTGTCACCCCTGG +
Preference number: 6 (lower is better)
Translates to: PRDLCPGCQIAN*RPSQSLDCHPW
Trigger: CCAGGGGTGACAGTCCAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS GCA 72 bp TCCAAAGCCCACTCCCTTAACTTTCTTGGGCTGGATTaGTGCAGTTGCCACTGTCCCGTTGGCACCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SKAHSLNFLGLD*CSCHCPVGTFR
Trigger: TCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CCA 72 bp TTGGTTTTCCTTCCGTGCCGAACAGAGACGGGGAGTTaGCTCTGTGTCCAGCTGTTCCCAAAGAGGATGACA +
Preference number: 6 (lower is better)
Translates to: LVFLPCRTETGS*LCVQLFPKRMT
Trigger: TGTCATCCTCTTTGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CCA 72 bp TGCTGCTTGAGTCACCCCCATCACTCTCGGAGCCTGTaGTTTCCCTTAAACTGTAATAGCGTCTGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: CCLSHPHHSRSL*FPLNCNSVCGP
Trigger: AGGGCCACAGACGCTATTACAGTTTAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379697.7
ENST00000379726.7
CDS CAA 72 bp TTTGGTTTTCCTTCCGTGCCGAACAGAGACGGGGAGTaGGCTCTGTGTCCAGCTGTTCCCAAAGAGGATGAC +
Preference number: 6 (lower is better)
Translates to: FGFPSVPNRDGE*ALCPAVPKEDD
Trigger: GTCATCCTCTTTGGGAACAGCTGGACACAGAGCCAACTCCCCGTCTCTGTTCGGCACGGAAGGAAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp GAGTGCAGGAGCAAGGACAGAAGTGGCCGGTGTCTTCAGATAATTTaGCTGGAGGATGTAAGAGGGAAGCTTGAGCACCCCCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: ECRSKDRSGRCLQII*LEDVRGKLEHPLLL
Trigger: GAGGAGAAGGGGGTGCTCAAGCTTCCCTCTTACATCCTCCAGCAAAATTATCTGAAGACACCGGCCACTTCTGTCCTTGCTCCTGCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS GCA 72 bp TCAGAAGACAGCAAAGAGTTTCCACTGGGCACTTCGTaGAGGGGCTTTTCTGGAGCTTTGTTGGTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: SEDSKEFPLGTS*RGFSGALLVRG
Trigger: CCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000397821.8
ENST00000432234.5
CDS GCA 72 bp AAAGCCCACTCCCTTAACTTTCTTGGGCTGGATTGCTaGAGTTGCCACTGTCCCGTTGGCACCTTCAGACTT +
Preference number: 6 (lower is better)
Translates to: KAHSLNFLGLDC*SCHCPVGTFRL
Trigger: AAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS GCA 72 bp TGTCATTGCTGCGGTCCGAGAGATCTTTGTCCAGGATaGCAGATAGCGAACTGCCGGCCAAGTCAATCTTTG +
Preference number: 6 (lower is better)
Translates to: CHCCGPRDLCPG*QIANCRPSQSL
Trigger: CAAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCAATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS GCA 72 bp ACTGTAATAGCGTCTGTGGCCCTCCGTCTTTCCCGGTaGAGCTCGGTACAGAATTGTCCCTTCAAAGGTAGT +
Preference number: 6 (lower is better)
Translates to: TVIASVALRLSR*SSVQNCPFKGS
Trigger: ACTACCTTTGAAGGGACAATTCTGTACCGAGCTGCACCGGGAAAGACGGAGGGCCACAGACGCTATTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379697.7
ENST00000379726.7
CDS CAA 72 bp TCTAAGTCAATGTCATTGCTGCGGTCCGAGAGATCTTaGTCCAGGATGCCAGATAGCGAACTGCCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SKSMSLLRSERS*SRMPDSELPAK
Trigger: CTTGGCCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCAATGACATTGACTTAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp GAAATGCCAAGCTCATCCGACTCCCCTGACAGCTCCTTGATGAAGTaGGAAGGAAACATTCCAGTCTTCCCGTTGAGAACACCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: EMPSSSDSPDSSLMK*EGNIPVFPLRTPSH
Trigger: GTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS TCA 72 bp CGCCTCCCTGTAGCTTTTGGTCTGCTTGTGGTCGGATaGCTGAGTTTCTCAGTAGATGATACCACGGAGTCA +
Preference number: 6 (lower is better)
Translates to: RLPVAFGLLVVG*LSFSVDDTTES
Trigger: TGACTCCGTGGTATCATCTACTGAGAAACTCAGTCATCCGACCACAAGCAGACCAAAAGCTACAGGGAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS TCA 72 bp TTGCTTCTAATAAGGCCCAGGAAAAACCCCTGTGTGTaGGCAGGGCCTAAATGCTGGGTACCCAGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LLLIRPRKNPCV*AGPKCWVPSPH
Trigger: ATGAGGACTGGGTACCCAGCATTTAGGCCCTGCTCACACACAGGGGTTTTTCCTGGGCCTTATTAGAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS CCA 72 bp AGAGTTTCCACTGGGCACTTCGTGCAGGGGCTTTTCTaGAGCTTTGTTGGTGAGAGGGTCTTTCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: RVSTGHFVQGLF*SFVGERVFLHL
Trigger: GAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000397821.8
ENST00000432234.5
CDS CCA 72 bp GTTTCCCTTAAACTTGACTTGGATAGCTGCTCATCCTaGGAAATGCCAAGCTCATCCGACTCCCCTGACAGC +
Preference number: 6 (lower is better)
Translates to: VSLKLDLDSCSS*EMPSSSDSPDS
Trigger: GCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CAA 72 bp AGCAAGGACAGAAGTGGCCGGTGTCTTCAGATAATTTaGCTGGAGGATGTAAGAGGGAAGCTTGAGCACCCC +
Preference number: 6 (lower is better)
Translates to: SKDRSGRCLQII*LEDVRGKLEHP
Trigger: GGGGTGCTCAAGCTTCCCTCTTACATCCTCCAGCAAAATTATCTGAAGACACCGGCCACTTCTGTCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379697.7
CDS CAA 90 bp TCATCCTGGGAAATGCCAAGCTCATCCGACTCCCCTGACAGCTCCTaGATGAAGTTGGAAGGAAACATTCCAGTCTTCCCGTTGAGAACA +
Preference number: 6 (lower is better)
Translates to: SSWEMPSSSDSPDSS*MKLEGNIPVFPLRT
Trigger: TGTTCTCAACGGGAAGACTGGAATGTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379726.7
ENST00000397821.8
ENST00000431164.1
ENST00000432234.5
CDS CAA 72 bp CAAGTGAAATGTGTTCCTCCTTATCCTCTTCGGGACTaGGGGAGTCGAAGATATCAGGGCTTGAAAGGGATG +
Preference number: 6 (lower is better)
Translates to: QVKCVPPYPLRD*GSRRYQGLKGM
Trigger: CATCCCTTTCAAGCCCTGATATCTTCGACTCCCCAAGTCCCGAAGAGGATAAGGAGGAACACATTTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp TCAAAACCTTCTAAGTCAATGTCATTGCTGCGGTCCGAGAGATCTTaGTCCAGGATGCCAGATAGCGAACTGCCGGCCAAGTCAATCTTT +
Preference number: 6 (lower is better)
Translates to: SKPSKSMSLLRSERS*SRMPDSELPAKSIF
Trigger: AAAGATTGACTTGGCCGGCAGTTCGCTATCTGGCATCCTGGACAAAGATCTCTCGGACCGCAGCAATGACATTGACTTAGAAGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp GAGTTTCCACTGGGCACTTCGTGCAGGGGCTTTTCTGGAGCTTTGTaGGTGAGAGGGTCTTTCTTCATCTCTTTCTTTATTTCCATATCC +
Preference number: 6 (lower is better)
Translates to: EFPLGTSCRGFSGAL*VRGSFFISFFISIS
Trigger: GGATATGGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432234.5
CDS TCA 72 bp CTCAGACAAGTCTGCGGCACTTGGGGCTTTGGCTGCTaGAACCTCCATTCTGTGAAGTATGAAATGGTAATT +
Preference number: 6 (lower is better)
Translates to: LRQVCGTWGFGC*NLHSVKYEMVI
Trigger: AATTACCATTTCATACTTCACAGAATGGAGGTTTCAGCAGCCAAAGCCCCAAGTGCCGCAGACTTGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS CAA 72 bp GCTTTGTTGTCAGACACTTGGGATATGGTAACAGTCTaGGAAGTTTTCTTTGACGCGTCCACTCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: ALLSDTWDMVTV*EVFFDASTPLC
Trigger: GCACAGAGGAGTGGACGCGTCAAAGAAAACTTCCAAGACTGTTACCATATCCCAAGTGTCTGACAACAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
CDS CAA 90 bp GAGTTTCCACTGGGCACTTCGTGCAGGGGCTTTTCTGGAGCTTTGTaGGTGAGAGGGTCTTTCTTCATCTCTTTCTTTATTTCAATCTCA +
Preference number: 6 (lower is better)
Translates to: EFPLGTSCRGFSGAL*VRGSFFISFFISIS
Trigger: TGAGATTGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS CAA 90 bp GCTTCGTTAGAGGAATATGGTGAGGTTCTGGAAGTAAGTCTCAGCTaGATTTTCAGCAATTCTGGACTTTGGGAGACCTCCTCCACACAT +
Preference number: 6 (lower is better)
Translates to: ASLEEYGEVLEVSLS*IFSNSGLWETSSTH
Trigger: ATGTGTGGAGGAGGTCTCCCAAAGTCCAGAATTGCTGAAAATCAAGCTGAGACTTACTTCCAGAACCTCACCATATTCCTCTAACGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477102.1
CDS CAA 72 bp CTTTCTTTATTTCAATCTCAGACAAGTCTGCGGCACTaGGGGCTTTGGCTGCTGAAACCTCCATTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: LSLFQSQTSLRH*GLWLLKPPFCE
Trigger: TTCACAGAATGGAGGTTTCAGCAGCCAAAGCCCCAAGTGCCGCAGACTTGTCTGAGATTGAAATAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379698.8
CDS CCA 72 bp CTCTCTCTCTGGTCTTTCTTTTTCTTCTGTTCTGTTTaGAAGCATTTCTGGTCTTTCAGGAGGTATCTTTTT +
Preference number: 6 (lower is better)
Translates to: LSLWSFFFFCSV*KHFWSFRRYLF
Trigger: AAAAAGATACCTCCTGAAAGACCAGAAATGCTTCCAAACAGAACAGAAGAAAAAGAAAGACCAGAGAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379697.7
ENST00000379698.8
ENST00000379716.5
ENST00000379726.7
ENST00000397821.8
ENST00000494961.5