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Pregenerated sensors for SH3GL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141985

Ensembl transcript IDs: ENST00000269886.7, ENST00000593591.5, ENST00000598564.5

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 72 bp GCCCTCGGCAGCGCGGCTGTGGTCCCGTGTGAGGTGTaGTGGGGTGGGTGTGGGTGGCTGGTGGTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: ALGSAAVVPCEV*WGGCGWLVVAA
Trigger: AGCTGCCACCACCAGCCACCCACACCCACCCCAGCACACCTCACACGGGACCACAGCCGCGCTGCCGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269886.7
ENST00000598564.5
3UTR CCA 72 bp CTCGGCAGCGCGGCTGTGGTCCCGTGTGAGGTGTGCTaGGGTGGGTGTGGGTGGCTGGTGGTGGCAGCTTGT +
Preference number: 3 (lower is better)
Translates to: LGSAAVVPCEVC*GGCGWLVVAAC
Trigger: ACAAGCTGCCACCACCAGCCACCCACACCCACCCCAGCACACCTCACACGGGACCACAGCCGCGCTGCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269886.7
ENST00000598564.5
CDS CCA 90 bp TGGAACTGCGGCCCGCTAGGCGGGAGCCCCCTCCCAGGCGGTCAGTaGGCCGCTGCTGAGTCAGGTCCAATGGAGGAAACTGTCCGTCTA +
Preference number: 5 (lower is better)
Translates to: WNCGPLGGSPLPGGQ*AAAESGPMEETVRL
Trigger: TAGACGGACAGTTTCCTCCATTGGACCTGACTCAGCAGCGGCCCACTGACCGCCTGGGAGGGGGCTCCCGCCTAGCGGGCCGCAGTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS TCA 90 bp CCCGCTAGGCGGGAGCCCCCTCCCAGGCGGTCAGTGGGCCGCTGCTaGGTCAGGTCCAATGGAGGAAACTGTCCGTCTATCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PARREPPPRRSVGRC*VRSNGGNCPSIFLL
Trigger: CAGCAGGAAGATAGACGGACAGTTTCCTCCATTGGACCTGACTCAGCAGCGGCCCACTGACCGCCTGGGAGGGGGCTCCCGCCTAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS CCA 90 bp GCCCCCTCCCAGGCGGTCAGTGGGCCGCTGCTGAGTCAGGTCCAATaGAGGAAACTGTCCGTCTATCTTCCTGCTGTGGTGAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: APSQAVSGPLLSQVQ*RKLSVYLPAVVRRS
Trigger: AGACCTCCTCACCACAGCAGGAAGATAGACGGACAGTTTCCTCCATTGGACCTGACTCAGCAGCGGCCCACTGACCGCCTGGGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS GCA 90 bp CAGGAAATGAGCAGAAACGCACCAAGCTGCAGTGCTCAGGAAAAGTaGTTGCCAAATCCAGCCCTGCAAAAGGCGAGAGATAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QEMSRNAPSCSAQEK*LPNPALQKARDRER
Trigger: TCTTTCTCTATCTCTCGCCTTTTGCAGGGCTGGATTTGGCAAGCACTTTTCCTGAGCACTGCAGCTTGGTGCGTTTCTGCTCATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS TCA 72 bp CGGGAGCCCCCTCCCAGGCGGTCAGTGGGCCGCTGCTaGGTCAGGTCCAATGGAGGAAACTGTCCGTCTATC +
Preference number: 6 (lower is better)
Translates to: REPPPRRSVGRC*VRSNGGNCPSI
Trigger: GATAGACGGACAGTTTCCTCCATTGGACCTGACTCAGCAGCGGCCCACTGACCGCCTGGGAGGGGGCTCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS GCA 72 bp GAGAGGAGGGGAGAGAAGGGAGAGAGGGAAACCCGCTaGAGCCCTGGCCACCACATTCTTTCATCCGCTTTC +
Preference number: 6 (lower is better)
Translates to: ERRGEKGERETR*SPGHHILSSAF
Trigger: GAAAGCGGATGAAAGAATGTGGTGGCCAGGGCTGCAGCGGGTTTCCCTCTCTCCCTTCTCTCCCCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS CCA 72 bp CAGGCGGTCAGTGGGCCGCTGCTGAGTCAGGTCCAATaGAGGAAACTGTCCGTCTATCTTCCTGCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: QAVSGPLLSQVQ*RKLSVYLPAVV
Trigger: CACCACAGCAGGAAGATAGACGGACAGTTTCCTCCATTGGACCTGACTCAGCAGCGGCCCACTGACCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS TCA 72 bp AATGGAGGAAACTGTCCGTCTATCTTCCTGCTGTGGTaGGGAGGTCTCCCCGTGACCCTGCTCTCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: NGGNCPSIFLLW*GGLPVTLLSGP
Trigger: AGGCCCTGAGAGCAGGGTCACGGGGAGACCTCCTCACCACAGCAGGAAGATAGACGGACAGTTTCCTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS TCA 72 bp GAGTTCAGGGAGCCCTGGGTACTGCTTAACAGGAAATaGGCAGAAACGCACCAAGCTGCAGTGCTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: EFREPWVLLNRK*AETHQAAVLRK
Trigger: TTTCCTGAGCACTGCAGCTTGGTGCGTTTCTGCTCATTTCCTGTTAAGCAGTACCCAGGGCTCCCTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS GCA 72 bp GAAACGCACCAAGCTGCAGTGCTCAGGAAAAGTGCTTaGCAAATCCAGCCCTGCAAAAGGCGAGAGATAGAG +
Preference number: 6 (lower is better)
Translates to: ETHQAAVLRKSA*QIQPCKRREIE
Trigger: CTCTATCTCTCGCCTTTTGCAGGGCTGGATTTGGCAAGCACTTTTCCTGAGCACTGCAGCTTGGTGCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593591.5
CDS GCA 72 bp AGCAGAAACGCACCAAGCTGCAGTGCTCAGGAAAAGTaGTTGCCAAATCCAGCCCTGCAAAAGGCGAGAGAT +
Preference number: 6 (lower is better)
Translates to: SRNAPSCSAQEK*LPNPALQKARD
Trigger: ATCTCTCGCCTTTTGCAGGGCTGGATTTGGCAAGCACTTTTCCTGAGCACTGCAGCTTGGTGCGTTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593591.5