RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3D21 (Homo sapiens)

Ensembl gene IDs: ENSG00000214193

Ensembl transcript IDs: ENST00000453908.8, ENST00000474766.1, ENST00000480549.6, ENST00000496636.1, ENST00000505871.7, ENST00000508854.2, ENST00000672976.1

Found 849 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTaGTGGGCACAGGCACGCTGGGGCCCAGCCCCACGGCCACGGGCA +
Preference number: 1 (lower is better)
Translates to: ANGSCGRSGAPGSRT*WAQARWGPAPRPRA
Trigger: TGCCCGTGGCCGTGGGGCTGGGCCCCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp AGATCTGGCGCACCGGGCAGCCGGACCTGCTGGGCACAGGCACGCTaGGGCCCAGCCCCACGGCCACGGGCACCCTGGGCCGCATGCACT +
Preference number: 1 (lower is better)
Translates to: RSGAPGSRTCWAQAR*GPAPRPRAPWAACT
Trigger: AGTGCATGCGGCCCAGGGTGCCCGTGGCCGTGGGGCTGGGCCCCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCCCGGTGCGCCAGATCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp AACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCTaGGCACAGGCACGCTGGGGCCCAGCCCCACGGCCACGGGCACCC +
Preference number: 1 (lower is better)
Translates to: NGSCGRSGAPGSRTC*AQARWGPAPRPRAP
Trigger: GGGTGCCCGTGGCCGTGGGGCTGGGCCCCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp GCGGCCGGGCGAGGAGAGAGGCAGCTTCCCTTCCCGGAGCCCGCCTaGGGCGTGGAGGCTCAGCGTCCCTATCCTCCATCCCGCCCCGGG +
Preference number: 1 (lower is better)
Translates to: AAGRGERQLPFPEPA*GVEAQRPYPPSRPG
Trigger: CCCGGGGCGGGATGGAGGATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAAGGGAAGCTGCCTCTCTCCTCGCCCGGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp GGCGAGGAGAGAGGCAGCTTCCCTTCCCGGAGCCCGCCTGGGGCGTaGAGGCTCAGCGTCCCTATCCTCCATCCCGCCCCGGGACGGCGG +
Preference number: 1 (lower is better)
Translates to: GEERGSFPSRSPPGA*RLSVPILHPAPGRR
Trigger: CCGCCGTCCCGGGGCGGGATGGAGGATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAAGGGAAGCTGCCTCTCTCCTCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp CGGGCCGCCACGAAGTTAGGGAAGCGCTCTCTCCAGGGTGGAACCTaGGCCCGCGGCTCCCGGGAGAGGAGCTGCCCGCGGAAGGGGTCG +
Preference number: 1 (lower is better)
Translates to: RAATKLGKRSLQGGT*ARGSRERSCPRKGS
Trigger: CGACCCCTTCCGCGGGCAGCTCCTCTCCCGGGAGCCGCGGGCCCAGGTTCCACCCTGGAGAGAGCGCTTCCCTAACTTCGTGGCGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp AGGGCCCCGGGCCGCCACGAAGTTAGGGAAGCGCTCTCTCCAGGGTaGAACCTGGGCCCGCGGCTCCCGGGAGAGGAGCTGCCCGCGGAA +
Preference number: 1 (lower is better)
Translates to: RAPGRHEVREALSPG*NLGPRLPGEELPAE
Trigger: TTCCGCGGGCAGCTCCTCTCCCGGGAGCCGCGGGCCCAGGTTCCACCCTGGAGAGAGCGCTTCCCTAACTTCGTGGCGGCCCGGGGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp CCCGCCCCGTCCCTCCTCTTTCCTCGGAGGAAACTTTCCGCCGGCTaGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCGGCCTGGGAG +
Preference number: 1 (lower is better)
Translates to: PAPSLLFPRRKLSAG*SLGPCPARAAAAWE
Trigger: CTCCCAGGCCGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTTCCTCCGAGGAAAGAGGAGGGACGGGGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 90 bp ACTTCGTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTaGTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCGGCCCCGGG +
Preference number: 1 (lower is better)
Translates to: TSCWASASACCSPSA*SSSASRGRPARGPG
Trigger: CCCGGGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp GCCCGCGGCTCCCGGGAGAGGAGCTGCCCGCGGAAGGGGTCGGGGTaGGCTCCAGGCTGGGAGAAGGATCTGACTTTGCTGACCTCGCAG +
Preference number: 1 (lower is better)
Translates to: ARGSRERSCPRKGSG*APGWEKDLTLLTSQ
Trigger: CTGCGAGGTCAGCAAAGTCAGATCCTTCTCCCAGCCTGGAGCCCACCCCGACCCCTTCCGCGGGCAGCTCCTCTCCCGGGAGCCGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 90 bp CTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTaGCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCGGCCC +
Preference number: 1 (lower is better)
Translates to: LYFVLGVCFGLLLTL*LLVISISWAPRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp CACGCAGGCAGAGCTCCAGCCTCTCTGTTGTTGCTGTTAGTGGCCTaGGGGCGGGTCCCTGCCGCGGCCTCCCCGGCGGTTTCCCTCTGC +
Preference number: 1 (lower is better)
Translates to: HAGRAPASLLLLLVA*GRVPAAASPAVSLC
Trigger: GCAGAGGGAAACCGCCGGGGAGGCCGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGGAGCTCTGCCTGCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474766.1
3UTR TCA 90 bp GGAGTTGCTCAGCAACAGCCTGGCTGCCTACGCGCACATCCGCGGTaGGGGCGGGCGCCGGAAGACTGGGGGCCTGAACCCTTCCCTGAC +
Preference number: 1 (lower is better)
Translates to: GVAQQQPGCLRAHPR*GRAPEDWGPEPFPD
Trigger: GTCAGGGAAGGGTTCAGGCCCCCAGTCTTCCGGCGCCCGCCCTCACCGCGGATGTGCGCGTAGGCAGCCAGGCTGTTGCTGAGCAACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 90 bp CCCTGTGCCCCGCAGCCAACCCCGAGAGCTTCGGCCTCTACTTCGTaGTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCG +
Preference number: 1 (lower is better)
Translates to: PCAPQPTPRASASTS*WASASACCSPSACS
Trigger: CGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCTCGGGGTTGGCTGCGGGGCACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp GTGCAGAGATCCGAAGCGGGTGGCTGGGCTGACCCACGGACAGGCTaGTGGGCTGGGGAGCAGCAGGCAGTCAAGCAGCTAGGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: VQRSEAGGWADPRTG*WAGEQQAVKQLGRG
Trigger: CCCCCTGCCTAGCTGCTTGACTGCCTGCTGCTCCCCAGCCCACCAGCCTGTCCGTGGGTCAGCCCAGCCACCCGCTTCGGATCTCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 90 bp TCCAGCCTCTCTGTTGTTGCTGTTAGTGGCCTGGGGGCGGGTCCCTaGCGCGGCCTCCCCGGCGGTTTCCCTCTGCCTGCTCGTCATCAG +
Preference number: 1 (lower is better)
Translates to: SSLSVVAVSGLGAGP*RGLPGGFPLPARHQ
Trigger: CTGATGACGAGCAGGCAGAGGGAAACCGCCGGGGAGGCCGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474766.1
3UTR GCA 90 bp GTGGGGGACGGGATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTaGTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCC +
Preference number: 1 (lower is better)
Translates to: VGDGMGWDLPQAATS*LVHKSAGARRHRGP
Trigger: GGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCCCGTCCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 90 bp GGCCTTGGGAACGGTAATGGGAGCCACATGTTGGCCAGATGTGCCTaGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGC +
Preference number: 1 (lower is better)
Translates to: GLGNGNGSHMLARCA*EGPSGMRRPRPCPR
Trigger: GCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTACCGTTCCCAAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CCA 90 bp GGGACGGGATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTaGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGC +
Preference number: 1 (lower is better)
Translates to: GTGWGGICHKPPQAA*CTRAQELAGTEAPR
Trigger: GCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR GCA 90 bp ACGGGATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTaGACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTGG +
Preference number: 1 (lower is better)
Translates to: TGWGGICHKPPQAAW*TRAQELAGTEAPRW
Trigger: CCAGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 90 bp TGTGCCCCGCAGCCAACCCCGAGAGCTTCGGCCTCTACTTCGTGCTaGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCA +
Preference number: 1 (lower is better)
Translates to: CAPQPTPRASASTSC*ASASACCSPSACSS
Trigger: TGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCTCGGGGTTGGCTGCGGGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR TCA 90 bp TCCCTTCCCAGGCCCACCCTCAGTAGGTCTGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGA +
Preference number: 1 (lower is better)
Translates to: SLPRPTLSRSASACG*RAGSGTSGSPASPG
Trigger: TCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGGTGGGCCTGGGAAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 90 bp CACCCTGGGCCGCATGCACTATTACTGATGGGCCCCGGCTCCCGCTaGAAGGCGCTCGGGGTACCGGACCTGCACATGAGCTCAGAGCTA +
Preference number: 1 (lower is better)
Translates to: HPGPHALLLMGPGSR*KALGVPDLHMSSEL
Trigger: TAGCTCTGAGCTCATGTGCAGGTCCGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGCGGCCCAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 90 bp AGAGCTTCGGCCTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTGCTaGTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCC +
Preference number: 1 (lower is better)
Translates to: RASASTSCWASASAC*SPSACSSSASRGRP
Trigger: GGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 90 bp CCGAGAGCTTCGGCCTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTaGTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGC +
Preference number: 1 (lower is better)
Translates to: PRASASTSCWASASA*CSPSACSSSASRGR
Trigger: GCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp GGTGCTGCTAGCCCCGGTGTAAGCATGCGTGCTTGGGCTGGACGGTaGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: GAASPGVSMRAWAGR*TSRLRRGAFKREGR
Trigger: CCTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATGCTTACACCGGGGCTAGCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR GCA 90 bp GCAGCCAACCCCGAGAGCTTCGGCCTCTACTTCGTGCTGGGCGTCTaGTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATC +
Preference number: 1 (lower is better)
Translates to: AANPESFGLYFVLGV*FGLLLTLCLLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCTCGGGGTTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 90 bp GACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTaGCCCACAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTT +
Preference number: 1 (lower is better)
Translates to: DWGSRGLQPGQGEGR*PTGLRQRLQLCLQF
Trigger: AAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 90 bp GCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: AEFTFSRFPKSCART*VAPARSGRGPFPGP
Trigger: TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
3UTR CCA 90 bp AATAGCCGCGCGCAGGCCTTGGGAACGGTAATGGGAGCCACATGTTaGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCA +
Preference number: 1 (lower is better)
Translates to: NSRAQALGTVMGATC*PDVPGRDRQECGGP
Trigger: TGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CCA 90 bp TCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCT +
Preference number: 1 (lower is better)
Translates to: SYISRVSQSRVQGRG*PQPGQAAVPSQAHP
Trigger: AGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 90 bp GGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: GFIHFSRFPKSCART*VAPARSGRGPFPGP
Trigger: TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR TCA 90 bp GGAGATGGGCAGGTGGATAGTTGGGATGAGGGCCAGAACAGCAGGTaGCACACGTGCAGAGATCCGAAGCGGGTGGCTGGGCTGACCCAC +
Preference number: 1 (lower is better)
Translates to: GDGQVDSWDEGQNSR*HTCRDPKRVAGLTH
Trigger: GTGGGTCAGCCCAGCCACCCGCTTCGGATCTCTGCACGTGTGTCACCTGCTGTTCTGGCCCTCATCCCAACTATCCACCTGCCCATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 90 bp GCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTT +
Preference number: 1 (lower is better)
Translates to: AVLGRVYFLAFPKVV*KDVGGPSQVRPRSL
Trigger: AAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
3UTR CCA 90 bp AGGGTACATTTCATCTCTCCCAGGCACCTCTCTGAGGAAGGAGGCTaGGGTGGGGGTGCCTCTGGCGTGTGGGCCTCCTCCTGGGATGAT +
Preference number: 1 (lower is better)
Translates to: RVHFISPRHLSEEGG*GGGASGVWASSWDD
Trigger: ATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACCCCCACCCCAGCCTCCTTCCTCAGAGAGGTGCCTGGGAGAGATGAAATGTACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 90 bp TCGTCATTGGAAGGTGCCTCCTCTGGAAGGGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGGGCAGGCCTGGATGCTGGCCCAGAC +
Preference number: 1 (lower is better)
Translates to: SSLEGASSGRVVASS*GWGFSRAGLDAGPD
Trigger: GTCTGGGCCAGCATCCAGGCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCCAATGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 90 bp TGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTaGAATGACACACACACCAGGCCTCAGGACCCTGACCTCGAGGCT +
Preference number: 1 (lower is better)
Translates to: WTHVALSPQCPGFIH*NDTHTRPQDPDLEA
Trigger: AGCCTCGAGGTCAGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR GCA 90 bp ACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTT +
Preference number: 1 (lower is better)
Translates to: TVPWVHTFLAFPKVV*KDVGGPSQVRPRSL
Trigger: AAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR GCA 90 bp AGCGGTGGGGAGCATGGGCTCTGCAGTCCAGTCCAGGCCACTACTTaGAGCCATGTGACTCCACAGGCACTGCTTAACCTCGCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: SGGEHGLCSPVQATT*SHVTPQALLNLAEP
Trigger: AGGCTCAGCGAGGTTAAGCAGTGCCTGTGGAGTCACATGGCTGCAAGTAGTGGCCTGGACTGGACTGCAGAGCCCATGCTCCCCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CCA 90 bp TTGGAAGGTGCCTCCTCTGGAAGGGTTGTAGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGCCTGGATGCTGGCCCAGACTTCAAC +
Preference number: 1 (lower is better)
Translates to: LEGASSGRVVASSWG*GFSRAGLDAGPDFN
Trigger: GTTGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR TCA 90 bp CGGGCCCTGGCTCAAAGCTGGAGTCCAACAATCATTAACCCTGCGTaGCTAGACCAGAGCTCGGCCAGGGGACACATTCAAGCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: RALAQSWSPTIINPA*LDQSSARGHIQAWA
Trigger: GGCCCAGGCTTGAATGTGTCCCCTGGCCGAGCTCTGGTCTAGTCACGCAGGGTTAATGATTGTTGGACTCCAGCTTTGAGCCAGGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 90 bp TCCTGGGCAGATAGGCAGCGAGGAGGTAGGGAGGAGATGGGCAGGTaGATAGTTGGGATGAGGGCCAGAACAGCAGGTGACACACGTGCA +
Preference number: 1 (lower is better)
Translates to: SWADRQRGGREEMGR*IVGMRARTAGDTRA
Trigger: TGCACGTGTGTCACCTGCTGTTCTGGCCCTCATCCCAACTATCCACCTGCCCATCTCCTCCCTACCTCCTCGCTGCCTATCTGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 90 bp CAGGGCAAGCCTTCAGTTTGGCCACTGGGGCCGGGAGCAGAGCTGTaGTTGGGTTTGCACTGGGTCCTGAATATGCCAGCACTCACAAGT +
Preference number: 1 (lower is better)
Translates to: QGKPSVWPLGPGAEL*LGLHWVLNMPALTS
Trigger: ACTTGTGAGTGCTGGCATATTCAGGACCCAGTGCAAACCCAAGCACAGCTCTGCTCCCGGCCCCAGTGGCCAAACTGAAGGCTTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CCA 90 bp GAGAATGATGGCCTAGAGTTGCCCCATGGAAAGCGGTGGGGAGCATaGGCTCTGCAGTCCAGTCCAGGCCACTACTTGCAGCCATGTGAC +
Preference number: 1 (lower is better)
Translates to: ENDGLELPHGKRWGA*ALQSSPGHYLQPCD
Trigger: GTCACATGGCTGCAAGTAGTGGCCTGGACTGGACTGCAGAGCCCATGCTCCCCACCGCTTTCCATGGGGCAACTCTAGGCCATCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR TCA 90 bp GAGTCTCCCTCTTCCCTCCATCCAAGACCTATCCCCGTGGTAGGGTaGGGCCCATGTCAACGGCAGAATAGCCAGGGCAAGCCTTCAGTT +
Preference number: 1 (lower is better)
Translates to: ESPSSLHPRPIPVVG*GPCQRQNSQGKPSV
Trigger: AACTGAAGGCTTGCCCTGGCTATTCTGCCGTTGACATGGGCCTCACCCTACCACGGGGATAGGTCTTGGATGGAGGGAAGAGGGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR TCA 90 bp AGCATGGGCTCTGCAGTCCAGTCCAGGCCACTACTTGCAGCCATGTaGCTCCACAGGCACTGCTTAACCTCGCTGAGCCTCACTTCCTTC +
Preference number: 1 (lower is better)
Translates to: SMGSAVQSRPLLAAM*LHRHCLTSLSLTSF
Trigger: GAAGGAAGTGAGGCTCAGCGAGGTTAAGCAGTGCCTGTGGAGTCACATGGCTGCAAGTAGTGGCCTGGACTGGACTGCAGAGCCCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CCA 90 bp CGCGCGCATTCCTTATTCAAAACGCATTCCTTACCGGCAAACGCCTaGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACAC +
Preference number: 1 (lower is better)
Translates to: RAHSLFKTHSLPANA*THVALSPQCPGFIH
Trigger: GTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTAAGGAATGCGTTTTGAATAAGGAATGCGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 90 bp GTAAAGTCAATTCAATCTCTCCAAGACTCCGTTTATTTGATCCTCTaGCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCGGCCC +
Preference number: 1 (lower is better)
Translates to: VKSIQSLQDSVYLIL*LLVISISWAPRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGATCAAATAAACGGAGTCTTGGAGAGATTGAATTGACTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 90 bp TTCTCAAGGGCAGGCCTGGATGCTGGCCCAGACTTCAACTCAGCCTaGCGTGGGGAGCTGTCCCCTCTAACTAGGGTACATTTCATCTCT +
Preference number: 1 (lower is better)
Translates to: FSRAGLDAGPDFNSA*RGELSPLTRVHFIS
Trigger: AGAGATGAAATGTACCCTAGTTAGAGGGGACAGCTCCCCACGCCAGGCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 90 bp TTGTCAGGCGGAGTAAGTGAAAGAACCTGTCCAAGGTTTAGCCCTTaGCCCGCACGCAGGCAGAGCTCCAGCCTCTCTGTTGTTGCTGTT +
Preference number: 1 (lower is better)
Translates to: LSGGVSERTCPRFSP*PARRQSSSLSVVAV
Trigger: AACAGCAACAACAGAGAGGCTGGAGCTCTGCCTGCGTGCGGGCCAAGGGCTAAACCTTGGACAGGTTCTTTCACTTACTCCGCCTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR GCA 90 bp GTGAGCCACCACACTGGGCCTATGATTGTCCATTTAGCAAATTTTTaGCAGTACCCTCTTTCCAGCAGCTGTCCCAGGTGCTGGGGTCAT +
Preference number: 1 (lower is better)
Translates to: VSHHTGPMIVHLANF*QYPLSSSCPRCWGH
Trigger: ATGACCCCAGCACCTGGGACAGCTGCTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGGCCCAGTGTGGTGGCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CCA 90 bp GCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTaGTGGACACCTCTTCTTCAGAAAGCTCTGGGGTCAAGACCTTTT +
Preference number: 1 (lower is better)
Translates to: AGLPPKRSDGIECHL*WTPLLQKALGSRPF
Trigger: AAAAGGTCTTGACCCCAGAGCTTTCTGAAGAAGAGGTGTCCACCAGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 90 bp GGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTGGTaGACACCTCTTCTTCAGAAAGCTCTGGGGTCAAGACCTTTTCTA +
Preference number: 1 (lower is better)
Translates to: GLPPKRSDGIECHLW*TPLLQKALGSRPFL
Trigger: TAGAAAAGGTCTTGACCCCAGAGCTTTCTGAAGAAGAGGTGTCCACCAGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 90 bp AAGACTGAAGGGCGGAGTGTGCATAGCATTTGGCAGAGTGCCAGGTaGCAGAAAGGGTACTCAATGTCCCTATTATTGTTTTCTTGTTGT +
Preference number: 1 (lower is better)
Translates to: KTEGRSVHSIWQSAR*QKGYSMSLLLFSCC
Trigger: ACAACAAGAAAACAATAATAGGGACATTGAGTACCCTTTCTGGCACCTGGCACTCTGCCAAATGCTATGCACACTCCGCCCTTCAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 90 bp AGACTAGGAAGTGCTAGGCATACACAGTATTTGTTGACTAGTGGCTaGACAGATTTATATACAGACATACCCGCCCCCACAACAATACTC +
Preference number: 1 (lower is better)
Translates to: RLGSARHTQYLLTSG*TDLYTDIPAPTTIL
Trigger: GAGTATTGTTGTGGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTGTGTATGCCTAGCACTTCCTAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCATCCTGCGGGAGATCTaGCGCACCGGGCAGCCGGAC +
Preference number: 2 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSILREI*RTGQPD
Trigger: GTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGAT...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
3UTR-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCGCTGGGGGCGTTCTCTaGAGCTGGGGGCCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVAGGVL*SWGPLW
Trigger: CCAGAGAGGCCCCCAGCTCCAGAGAACGCCCCCAGC...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCTCTGAGGAAGGAGGCTaGGGTGGGGGTGCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRASEEGG*GGGASG
Trigger: GCCAGAGGCACCCCCACCCCAGCCTCCTTCCTCAGA...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCGACCCACGGACAGGCTaGTGGGCTGGGGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVDPRTG*WAGEQQ
Trigger: CTGCTGCTCCCCAGCCCACCAGCCTGTCCGTGGGTC...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp AGCGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCGGCGCGACCAGACCGGCGTaGCGCCGTGCTAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: SANGSCGRSGAPGSRTCGATRPA*RRARQS
Trigger: ACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGC...GCCGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474766.1
3UTR-3UTR CCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCGAACCGGGCCTCAGCTaGGGACCTCACCAGGGGGCG +
Preference number: 2 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGEPGLS*GPHQGA
Trigger: CGCCCCCTGGTGAGGTCCCCAGCTGAGGCCCGGTTC...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCATGACGCGCGGGGTCTaGGACTTCTGGGTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVMTRGV*DFWVPC
Trigger: GCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCAT...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR GCA 90 bp AAACTTTCCGCCGGCTGGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCGGCCCAGCAACAGCCTGGCTaGCTACGCGCACATCCGCGG +
Preference number: 2 (lower is better)
Translates to: KLSAGWSLGPCPARAAAAQQQPG*LRAHPR
Trigger: CCGCGGATGTGCGCGTAGGCAGCCAGGCTGTTGCTG...GGCCGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGCCACCTGGCCTGGCTTaGCCACGGCAAGCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: RERILREIWRTGQPDRQTPPGLA*PRQAPS
Trigger: AGAGGGGGCTTGCCGTGGCCAAGCCAGGCCAGGTGG...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR GCA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: RERILREIWRTGQPDRQTSSRRR*SFSLFS
Trigger: GCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGA...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCTCTCAAGGGCAGGCCTaGATGCTGGCCCAGACTTCA +
Preference number: 2 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRASQGQA*MLAQTS
Trigger: TGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGA...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAVVASS*GWGFSR
Trigger: CCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAAC...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGTTCTCCCACCTGGCCTaGCTTGGCCACGGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: RERILREIWRTGQPDRQTFSHLA*LGHGKP
Trigger: GGGCTTGCCGTGGCCAAGCCAGGCCAGGTGGGAGAA...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCAGGGCATGTGGACCATaGGGACAGCCACATTGGCCA +
Preference number: 2 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRARACGP*GQPHWP
Trigger: TGGCCAATGTGGCTGTCCCCATGGTCCACATGCCCT...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 90 bp GGTTTAGCCCTTGGCCCGCACGCAGGCAGAGCTCCAGCCTCTCTGTaGTTGCTGTTAGTGGCCTGGGGGCGGGTCCCTGCCGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GLALGPHAGRAPASL*LLLVAWGRVPAAAS
Trigger: GGAGGCCGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGGAGCTCTGCCTGCGTGCGGGCCAAGGGCTAAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp CTTCCCTTCCCGGAGCCCGCCTGGGGCGTGGAGGCTCAGCGTCCCTATCCTCCAAGCGCGAACGGATCCTaGGGGAGATCTGGCGCACCG +
Preference number: 2 (lower is better)
Translates to: LPFPEPAWGVEAQRPYPPSANGS*GRSGAP
Trigger: CGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT...TGGAGGATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAAGGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCATGGGAGCCACATGTTaGCCAGATGTGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSMGATC*PDVPGR
Trigger: CCTCCCAGGCACATCTGGCCAACATGTGGCTCCCAT...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR CCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCGCTTGGGCTGGACGGTaGACTTCACGTCTGCGCCGA +
Preference number: 2 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGAWAGR*TSRLRR
Trigger: TCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGC...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGAGCCGGGATCTTCTTaGAGCTGGGGGCGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNEPGSS*SWGRSL
Trigger: CAGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTC...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCGTGTGGGCCTCCTCCTaGGATGATGGATCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRVWASS*DDGSSL
Trigger: CAAAGAGGATCCATCATCCCAGGAGGAGGCCCACAC...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGACCGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VWMTRGVWDFWVPCITWTVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...GGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGTAAGCATGCGTGCTTaGGCTGGACGGTGGACTTCA +
Preference number: 2 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSVSMRA*AGRWTS
Trigger: TGAAGTCCACCGTCCAGCCCAAGCACGCATGCTTAC...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp CTTCCCTTCCCGGAGCCCGCCTGGGGCGTGGAGGCTCAGCGTCCCTATCCTCCACCAGAGCAGCATGGATaGCCCGCGAAGGGACATGGA +
Preference number: 2 (lower is better)
Translates to: LPFPEPAWGVEAQRPYPPPEQHG*PAKGHG
Trigger: TCCATGTCCCTTCGCGGGGCATCCATGCTGCTCTGG...TGGAGGATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAAGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR GCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCGACTTCTGGGTCCCCTaGATCACCTGGACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRDFWVP*ITWTSS
Trigger: GCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTC...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR CCA 90 bp CCCTCAGTAGGTCTGCGTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGCGTTCTCTGGAGCTaGGGGCCTCTCTGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: PSVGLRLRVDDARGLGLLGVLWS*GPLWGG
Trigger: GCCACCCCAGAGAGGCCCCCAGCTCCAGAGAACGCC...CAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR TCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGTTCATACACTGCAATaGCACACACACCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSVHTLQ*HTHQAS
Trigger: TGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAAC...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR CCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQSCART*VAPARS
Trigger: TGACCTGGCTGGGGCCACCCACGTCCTTGCACACGA...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR CCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGGCGACCAGACCGGCGTaGCGCCGTGCTAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQATRPA*RRARQS
Trigger: ACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGC...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CATGTCAACGGCAGAATAGCCAGGGCAAGCCTTCAGTTTGGCCACTGGGGCCGGCCCGCAGCAGCACCCTaGAGCCCGAGGACGACGACG +
Preference number: 2 (lower is better)
Translates to: HVNGRIARASLQFGHWGRPAAAP*SPRTTT
Trigger: CGTCGTCGTCCTCGGGCTCCAGGGTGCTGCTGCGGG...CCGGCCCCAGTGGCCAAACTGAAGGCTTGCCCTGGCTATTCTGCCGTTGACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp CCCTCAGTAGGTCTGCGTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTGGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: PSVGLRLRVDDARGLGLLASSWG*GFSRAG
Trigger: GCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGC...CAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTGTCTGCGTCTGCGTGTaGATGACGCGCGGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAVCVCV*MTRGVW
Trigger: CCAGACCCCGCGCGTCATCCACACGCAGACGCAGAC...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCGTCCCCACAGTGCCCTaGGTTCATACATTTCTCGCG +
Preference number: 2 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGVPTVP*VHTFLA
Trigger: CGCGAGAAATGTATGAACCCAGGGCACTGTGGGGAC...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR GCA 90 bp GTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCGCACCCTGGGCCGCATaGACTATTACTGATGGGCCC +
Preference number: 2 (lower is better)
Translates to: VLGVCFGLLLTLCLLVISAPWAA*TITDGP
Trigger: GGGCCCATCAGTAATAGTGCATGCGGCCCAGGGTGC...GCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp GGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGAGTTCCCCGGCGCACAGCTaGATTCCGGAATCTAGGCCG +
Preference number: 2 (lower is better)
Translates to: GRWTSRLRRGAFKREGRSSPAHS*IPESRP
Trigger: CGGCCTAGATTCCGGAATCCAGCTGTGCGCCGGGGA...ACTCCTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR CCA 90 bp GTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCTTACCGGCAAACGCCTaGACACACGTCGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VLGVCFGLLLTLCLLVISLPANA*THVALS
Trigger: GGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTAA...GCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGGATCTTCTTGGAGCTaGGGGCGTTCTCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAEGSSWS*GRSLEL
Trigger: CAGCTCCAGAGAACGCCCCCAGCTCCAAGAAGATCC...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp CAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCTCAGTAGGTCTGCGTCTGCGGGGTCCTCTCGTCATTaGAAGGTGCCTCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: QVRPRSLPRPTLSRSASAGSSRH*KVPPLE
Trigger: TTCCAGAGGAGGCACCTTCCAATGACGAGAGGACCC...CGCAGACGCAGACCTACTGAGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCTGGTCTCAAACTCCTaGACTTCAGTGATCTGCACA +
Preference number: 2 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVLVSNS*TSVICT
Trigger: TGTGCAGATCACTGAAGTCCAGGAGTTTGAGACCAG...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR GCA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCCCGCCATTTCTCCAGTaGGCGGCTGGAGTCCGAAGG +
Preference number: 2 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCPPFLQ*AAGVRR
Trigger: CCTTCGGACTCCAGCCGCGCACTGGAGAAATGGCGG...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCACGTCTGCGCCGAGGTaGGTTCAAGCGAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCTSAPR*VQARGQ
Trigger: CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGT...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp TACCGGCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCACGGTGTAAGCATGCGTaGTTGGGCTGGACGGTGGAC +
Preference number: 2 (lower is better)
Translates to: YRQTPGHTSPCPHSALGSRCKHA*LGWTVD
Trigger: GTCCACCGTCCAGCCCAAGCACGCATGCTTACACCG...TGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR GCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCCCTGGGTTCATACACTaGAATGACACACACACCAGG +
Preference number: 2 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGPGFIH*NDTHTR
Trigger: CCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGG...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CAA 90 bp CCCGCCCCTCACCATCCGGTGGATAAAAATAGCCGCGCGCAGGCCTaGGGAACGGTAATGGGAGCCACATGTTGGCCAGATGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PAPHHPVDKNSRAQA*GTVMGATCWPDVPG
Trigger: CCCAGGCACATCTGGCCAACATGTGGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCTATTTTTATCCACCGGATGGTGAGGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR TCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCGTCAGGCGGAGTAAGTaGAAGAACCTGTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRVRRSK*KNLSKV
Trigger: AACCTTGGACAGGTTCTTTCACTTACTCCGCCTGAC...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR TCA 90 bp CTTGCCCGCTGGCGGTTCCCTAATGCCCTTCGAGTAGGGGTTACAGGCCTCGCCTACCGGACCTGCACATaGGCTCAGAGCTACCCCACA +
Preference number: 2 (lower is better)
Translates to: LARWRFPNALRVGVTGLAYRTCT*AQSYPT
Trigger: TGTGGGGTAGCTCTGAGCTCATGTGCAGGTCCGGTA...GGCGAGGCCTGTAACCCCTACTCGAAGGGCATTAGGGAACCGCCAGCGGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR TCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTAGCGGGTGGCTGGGCTaGCCCACGGACAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: SPCPHSALGSYISRVSQSSGWLG*PTDRLV
Trigger: CACCAGCCTGTCCGTGGGTCAGCCCAGCCACCCGCT...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR GCA 90 bp GTAAGTGAAAGAACCTGTCCAAGGTTTAGCCCTTGGCCCGCACGCAGGCAGAGCAGGGACCGTCAGGAATaGGGAGGCCCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: VSERTCPRFSPWPARRQSRDRQE*GGPGPA
Trigger: GGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCT...GCTCTGCCTGCGTGCGGGCCAAGGGCTAAACCTTGGACAGGTTCTTTCACTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTTCCCTCTGTTACTCCTaGCCCCAGCGACCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLSLCYS*PQRPPG
Trigger: GCCTGGGGGTCGCTGGGGGCAGGAGTAACAGAGGGA...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR GCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTACGTCTGCGCCGAGGTaGGTTCAAGCGAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLTSAPR*VQARGQ
Trigger: CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGT...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR GCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTAGCGCGAACGGATCCTaGGGGAGATCTGGCGCACCG +
Preference number: 2 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPSANGS*GRSGAP
Trigger: CGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR CCA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCCCCCTCACCATCCGGTaGATAAAAATAGCCGCGCGC +
Preference number: 2 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCPLTIR*IKIAAR
Trigger: GCGCGCGGCTATTTTTATCCACCGGATGGTGAGGGG...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR CCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCGCAGCAGCACCCTaGAGCCCGAGGACGACGACG +
Preference number: 2 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGPAAAP*SPRTTT
Trigger: CGTCGTCGTCCTCGGGCTCCAGGGTGCTGCTGCGGG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR-3UTR CCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTAAACTTTCCGCCGGCTaGTCCCTCGGTCCGTGTCCC +
Preference number: 2 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLKLSAG*SLGPCP
Trigger: GGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CCCTCAGTAGGTCTGCGTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGAAGGTGCCTCCTCTaGAAGGGTTGTAGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: PSVGLRLRVDDARGLGLLGRCLL*KGCSLF
Trigger: GAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCC...CAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGTCCCCTGCATCACCTaGACCTCCAGCCGCCGGCGC +
Preference number: 2 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGVPCIT*TSSRRR
Trigger: GCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGG +
Preference number: 2 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLGVWDF*VPCITW
Trigger: CCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCC...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CAA 90 bp GGCAAGCCTTCAGTTTGGCCACTGGGGCCGGGAGCAGAGCTGTGCTaGGGTTTGCACTGGGTCCTGAATATGCCAGCACTCACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: GKPSVWPLGPGAELC*GLHWVLNMPALTSP
Trigger: GGGACTTGTGAGTGCTGGCATATTCAGGACCCAGTGCAAACCCAAGCACAGCTCTGCTCCCGGCCCCAGTGGCCAAACTGAAGGCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTTCCCCGGCGCACAGCTaGATTCCGGAATCTAGGCCG +
Preference number: 2 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPSPAHS*IPESRP
Trigger: CGGCCTAGATTCCGGAATCCAGCTGTGCGCCGGGGA...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCAGTCTTGTCCGGCATaGGGGTTCTCTTCACAGAGG +
Preference number: 2 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQQSCPA*GFSSQR
Trigger: CCTCTGTGAAGAGAACCCCCATGCCGGACAAGACTG...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTAGTCAGGGTCTCCTCTaGGATGATGGAGTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: KLLGAQERRSSQAQRPHASQGLL*DDGVLW
Trigger: CCAGAGAACTCCATCATCCCAGAGGAGACCCTGACT...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTAGACCCTCTCTGGAGTaGAGGGTTTGTCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: KLLGAQERRSSQAQRPHARPSLE*RVCPQS
Trigger: TGACTGTGGACAAACCCTCCACTCCAGAGAGGGTCT...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR GCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTGGATGGGGTGGGATCTaGCACAAGCCGCCACAAGCT +
Preference number: 2 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPGWGGI*HKPPQA
Trigger: AGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCC...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR GCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTCGTCATTGGAAGGTaGCTCCTCTGGAAGGGTTGT +
Preference number: 2 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQLVIGR*LLWKGC
Trigger: ACAACCCTTCCAGAGGAGGCACCTTCCAATGACGAG...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CAA 90 bp GGTGCCTCTGGCGTGTGGGCCTCCTCCTGGGATGATGGATCCTCTTaGGCTACAAAGTACTTGACCTTCTGCAGGGCTTCCTCCGAAGAG +
Preference number: 2 (lower is better)
Translates to: GASGVWASSWDDGSS*ATKYLTFCRASSEE
Trigger: CTCTTCGGAGGAAGCCCTGCAGAAGGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR GCA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR-3UTR GCA 90 bp CCCATAGGAGTCAGTCCTAGTCCTCCCCCATCTAGATCTGCCCTCTACTTGAACTTCGTGCTGGGCGTCTaGTTCGGCCTGCTGCTCACC +
Preference number: 2 (lower is better)
Translates to: PIGVSPSPPPSRSALYLNFVLGV*FGLLLT
Trigger: GGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAA...GTTCAAGTAGAGGGCAGATCTAGATGGGGGAGGACTAGGACTGACTCCTATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR GCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTACGGCAAGCCCCCTCTaGCTGCTCGTCATCAGCATC +
Preference number: 2 (lower is better)
Translates to: SPCPHSALGSYISRVSQSTASPL*LLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 90 bp GCAGGGGACTCTTCCACTGAAAAGACCCTCTCTGGAGTGGAGGGTTaGTCCACAGTCAGGGTCTCCTCTGGGATGATGGAGTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: AGDSSTEKTLSGVEG*STVRVSSGMMEFSG
Trigger: CCCAGAGAACTCCATCATCCCAGAGGAGACCCTGACTGTGGACAAACCCTCCACTCCAGAGAGGGTCTTTTCAGTGGAAGAGTCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR GCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTTGCTCACCCTCTGCCTaGTCGTCATCAGCATCTCGT +
Preference number: 2 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPCSPSA*SSSASR
Trigger: ACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCA...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CCACACTGGGCCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCGTCATCAGCATCTCGTaGGCGCCCCGCCCGCGGCCC +
Preference number: 2 (lower is better)
Translates to: PHWAYDCPFSKFLPVPSFVISIS*APRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGAC...GAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGGCCCAGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGGGCAGGTGGATAGTTaGGATGAGGGCCAGAACAGC +
Preference number: 2 (lower is better)
Translates to: PCPHSALGSYISRVSQSRGQVDS*DEGQNS
Trigger: GCTGTTCTGGCCCTCATCCCAACTATCCACCTGCCC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 90 bp CAGCGACGTTACATCAACTCCTTCATTCTTGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAGCGCGAGCGTCTCTTGGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: QRRYINSFILVFRVV*RDQRGERERLLGVW
Trigger: CCAGACTCCCAAGAGACGCTCGCGCTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAACAAGAATGAAGGAGTTGATGTAACGTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR TCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGGCCTCCTCCTGGGATaGTGGATCCTCTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGGLLLG*WILFGY
Trigger: GTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR TCA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACT +
Preference number: 2 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLASACG*RAGSGT
Trigger: AGTCCCAGACCCCGCGCGTCATCCACACGCAGACGC...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR GCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR-3UTR CCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCAGAGGGGCCATCTTTaGATTAGGGACTTTATCCAT +
Preference number: 2 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQQRGHL*IRDFIH
Trigger: ATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTG...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp TTGGCAGAGTGCCAGGTGCCAGAAAGGGTACTCAATGTCCCTATTATTGTTTTCGCCGCTTCTCCCACCTaGCCTGGCTTGGCCACGGCA +
Preference number: 2 (lower is better)
Translates to: LAECQVPERVLNVPIIVFAASPT*PGLATA
Trigger: TGCCGTGGCCAAGCCAGGCCAGGTGGGAGAAGCGGC...GAAAACAATAATAGGGACATTGAGTACCCTTTCTGGCACCTGGCACTCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR GCA 90 bp CTTGCCCGCTGGCGGTTCCCTAATGCCCTTCGAGTAGGGGTTACAGGCCTCGCCTCCGTTTATTTGATCTaGGAAGTGGGGATAATGGTA +
Preference number: 2 (lower is better)
Translates to: LARWRFPNALRVGVTGLASVYLI*EVGIMV
Trigger: TACCATTATCCCCACTTCGCAGATCAAATAAACGGA...GGCGAGGCCTGTAACCCCTACTCGAAGGGCATTAGGGAACCGCCAGCGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CCACACTGGGCCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PHWAYDCPFSKFLPVPSFVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...GAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGGCCCAGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR GCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCGGTGGACTTCACGTCTaGGCCGAGGTGCGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPGGLHV*AEVRSS
Trigger: GCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACC...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR GCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTGTTTATTTGATCCTCTaGCTGCTCGTCATCAGCATC +
Preference number: 2 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPVYLIL*LLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGATCAAATAAAC...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp ACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCACAACAATACTCCGAGGTGGAGTTCCCTaGGATAGAGGCCTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: TSGCTDLYTDIPAPTTILRGGVP*DRGLVP
Trigger: GGGGACAAGGCCTCTATCCCAGGGAACTCCACCTCG...GAGTATTGTTGTGGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGGGCAGGCCTGGATGCTaGCCCAGACTTCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLGRPGC*PRLQLS
Trigger: GCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCC...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CCA 90 bp TCTAGCTCAGGCTTTAGGATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTGCATGCGTGCTTGGGCTaGACGGTGGACTTCACGTCT +
Preference number: 2 (lower is better)
Translates to: SSSGFRIREQQIQILTVLHACLG*TVDFTS
Trigger: AGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATG...CAAAACCGTCAGGATTTGAATCTGCTGCTCTCTGATCCTAAAGCCTGAGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp GCAGATTCAAATCCTGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCGAGGCCTCTGCTCGTTaGGGGGCGCCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: ADSNPDGFGKVNSISPRLEASAR*GAPPLQ
Trigger: CTGAAGAGGAGGCGCCCCCCAACGAGCAGAGGCCTC...GAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGTCAGGATTTGAATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR TCA 90 bp CCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCCAGCAGCTGTGGCCAGAACAGCAGGTaGCACACGTGCAGAGATCCG +
Preference number: 2 (lower is better)
Translates to: PMIVHLANFCQYPLSSSCGQNSR*HTCRDP
Trigger: CGGATCTCTGCACGTGTGTCACCTGCTGTTCTGGCC...ACAGCTGCTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp AGCTGTGACCTCCCCAGCAACTGGGCACTTCACAAACACATTATCATTACCTTTTGGGGACAGCCACATTaGCCAAAGGTTTCAGGGACC +
Preference number: 2 (lower is better)
Translates to: SCDLPSNWALHKHIIITFWGQPH*PKVSGT
Trigger: GGTCCCTGAAACCTTTGGCCAATGTGGCTGTCCCCA...AAAGGTAATGATAATGTGTTTGTGAAGTGCCCAGTTGCTGGGGAGGTCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp TGGCATATTAGCCATAAATTTCATTTCAGGAGCATAAAGGGAGCAACAGCAAGCCCCCATGGAAAGCGGTaGGGAGCATGGGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: WHISHKFHFRSIKGATASPHGKR*GAWALQ
Trigger: CTGCAGAGCCCATGCTCCCCACCGCTTTCCATGGGG...GCTTGCTGTTGCTCCCTTTATGCTCCTGAAATGAAATTTATGGCTAATATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 90 bp GTACTTGACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATaGAATGTCATCTCTGGTGGACACCTCTTCTTCAGAAAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: VLDLLQGFLRREVME*NVISGGHLFFRKLW
Trigger: CCAGAGCTTTCTGAAGAAGAGGTGTCCACCAGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR TCA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACCCGTGCTTTCCAAGGTaGCAAATCTCTAGTCTCACA +
Preference number: 2 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYPCFPR*QISSLT
Trigger: TGTGAGACTAGAGATTTGTCACCTTGGAAAGCACGG...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CCA 90 bp TGGCATATTAGCCATAAATTTCATTTCAGGAGCATAAAGGGAGCAACAGCAAGCGAGGAGATGGGCAGGTaGATAGTTGGGATGAGGGCC +
Preference number: 2 (lower is better)
Translates to: WHISHKFHFRSIKGATASEEMGR*IVGMRA
Trigger: GGCCCTCATCCCAACTATCCACCTGCCCATCTCCTC...GCTTGCTGTTGCTCCCTTTATGCTCCTGAAATGAAATTTATGGCTAATATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 90 bp ATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGTaGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: MLWTRLGSARHTQYL*TSGCTDLYTDIPAP
Trigger: GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR CCA 90 bp CCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCCAGCAGCTGTACAGCAGATAAGTCCTaGGCAGATAGGCAGCGAGGA +
Preference number: 2 (lower is better)
Translates to: PMIVHLANFCQYPLSSSCTADKS*ADRQRG
Trigger: TCCTCGCTGCCTATCTGCCCAGGACTTATCTGCTGT...ACAGCTGCTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 90 bp CAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTaGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCC +
Preference number: 2 (lower is better)
Translates to: QMLWTRLGSARHTQY*LTSGCTDLYTDIPA
Trigger: GGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CAA 90 bp ACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCCGTTTATTaGATCTGCGAAGTGGGGATAATGGTATCACGTCGCAGGGTTGTC +
Preference number: 2 (lower is better)
Translates to: TVLVKSIQSLQDSVY*ICEVGIMVSRRRVV
Trigger: GACAACCCTGCGACGTGATACCATTATCCCCACTTCGCAGATCAAATAAACGGAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR-3UTR CCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCATTGAATGTCATCTCTaGTGGACACCTCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPIECHL*WTPLLQ
Trigger: CTGAAGAAGAGGTGTCCACCAGAGATGACATTCAAT...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR TCA 90 bp GCAGATTCAAATCCTGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCGGTGAAGTGACCAAATaGAAGAAAGCTGCATTCTCA +
Preference number: 2 (lower is better)
Translates to: ADSNPDGFGKVNSISPRLGEVTK*KKAAFS
Trigger: TGAGAATGCAGCTTTCTTTCATTTGGTCACTTCACC...GAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGTCAGGATTTGAATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp CCCACCCGTCCGGGCCTCTCCGTGACCCCCGCCCTGTaGCCCGCAGCCAACCCCGAGAGCTTCGGCCTCTAC +
Preference number: 3 (lower is better)
Translates to: PTRPGLSVTPAL*PAANPESFGLY
Trigger: GTAGAGGCCGAAGCTCTCGGGGTTGGCTGCGGGGCACAGGGCGGGGGTCACGGAGAGGCCCGGACGGGTGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR TCA 72 bp ACGGCCACGGGCACCCTGGGCCGCATGCACTATTACTaGTGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGG +
Preference number: 3 (lower is better)
Translates to: TATGTLGRMHYY*WAPAPAARRSG
Trigger: CCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGCGGCCCAGGGTGCCCGTGGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp GGCCCAGCCCCACGGCCACGGGCACCCTGGGCCGCATaGACTATTACTGATGGGCCCCGGCTCCCGCTGCAA +
Preference number: 3 (lower is better)
Translates to: GPAPRPRAPWAA*TITDGPRLPLQ
Trigger: TTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGCGGCCCAGGGTGCCCGTGGCCGTGGGGCTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 72 bp AGAGGCAGCTTCCCTTCCCGGAGCCCGCCTGGGGCGTaGAGGCTCAGCGTCCCTATCCTCCATCCCGCCCCG +
Preference number: 3 (lower is better)
Translates to: RGSFPSRSPPGA*RLSVPILHPAP
Trigger: CGGGGCGGGATGGAGGATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAAGGGAAGCTGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp TGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTaGTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGC +
Preference number: 3 (lower is better)
Translates to: WASASACCSPSA*SSSASRGRPAR
Trigger: GCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp TGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTaGATCACCTGGACCTCCAGCCGCCGGCGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: WMTRGVWDFWVP*ITWTSSRRRCS
Trigger: GGAGCAGCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CAA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCTCTGGAGTGGAGGGTTaGTCCACAGTCAGGGTCTCC +
Preference number: 3 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRSGVEG*STVRVS
Trigger: GGAGACCCTGACTGTGGACAAACCCTCCACTCCAGA...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 72 bp TCTGTTGTTGCTGTTAGTGGCCTGGGGGCGGGTCCCTaGCGCGGCCTCCCCGGCGGTTTCCCTCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: SVVAVSGLGAGP*RGLPGGFPLPA
Trigger: AGCAGGCAGAGGGAAACCGCCGGGGAGGCCGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAACAACAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474766.1
3UTR GCA 72 bp GTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTaGCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGC +
Preference number: 3 (lower is better)
Translates to: VLGVCFGLLLTL*LLVISISWAPR
Trigger: GCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp GCAGGCACAGAGGCCCCACGCTGGGGTCTGCGAGACTaGTGGCCGGGCCCTGGCTCAAAGCTGGAGTCCAAC +
Preference number: 3 (lower is better)
Translates to: AGTEAPRWGLRD*WPGPGSKLESN
Trigger: GTTGGACTCCAGCTTTGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACCCCAGCGTGGGGCCTCTGTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 72 bp TCCCTCCTCTTTCCTCGGAGGAAACTTTCCGCCGGCTaGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCG +
Preference number: 3 (lower is better)
Translates to: SLLFPRRKLSAG*SLGPCPARAAA
Trigger: CGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTTCCTCCGAGGAAAGAGGAGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 72 bp GTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGGACCTCCAGCCGCCGG +
Preference number: 3 (lower is better)
Translates to: VCVWMTRGVWDF*VPCITWTSSRR
Trigger: CCGGCGGCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR TCA 72 bp CCCGCTGCAAGGCGCTCGGGGTACCGGACCTGCACATaGGCTCAGAGCTACCCCACACCTTCGGACTGCCTC +
Preference number: 3 (lower is better)
Translates to: PAARRSGYRTCT*AQSYPTPSDCL
Trigger: GAGGCAGTCCGAAGGTGTGGGGTAGCTCTGAGCTCATGTGCAGGTCCGGTACCCCGAGCGCCTTGCAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR TCA 72 bp AGGCCCACCCTCAGTAGGTCTGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: RPTLSRSASACG*RAGSGTSGSPA
Trigger: TGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGGTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 72 bp CCGCATGCACTATTACTGATGGGCCCCGGCTCCCGCTaGAAGGCGCTCGGGGTACCGGACCTGCACATGAGC +
Preference number: 3 (lower is better)
Translates to: PHALLLMGPGSR*KALGVPDLHMS
Trigger: GCTCATGTGCAGGTCCGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp CCGCAGCCAACCCCGAGAGCTTCGGCCTCTACTTCGTaGTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCT +
Preference number: 3 (lower is better)
Translates to: PQPTPRASASTS*WASASACCSPS
Trigger: AGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCTCGGGGTTGGCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp GTCCCCTGCATCACCTGGACCTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGCTCCTCCCAGATGTCG +
Preference number: 3 (lower is better)
Translates to: VPCITWTSSRRR*SFSLFSSSQMS
Trigger: CGACATCTGGGAGGAGCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp TCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SRVSQSRVQGRG*PQPGQAAVPSQ
Trigger: CTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
3UTR CCA 72 bp CAGCCAACCCCGAGAGCTTCGGCCTCTACTTCGTGCTaGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: QPTPRASASTSC*ASASACCSPSA
Trigger: GGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGAAGCTCTCGGGGTTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 72 bp GGCACAGAGGCCCCACGCTGGGGTCTGCGAGACTGCTaGCCGGGCCCTGGCTCAAAGCTGGAGTCCAACAAT +
Preference number: 3 (lower is better)
Translates to: GTEAPRWGLRDC*PGPGSKLESNN
Trigger: ATTGTTGGACTCCAGCTTTGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACCCCAGCGTGGGGCCTCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 72 bp AGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTaGCCCACAGGCCTCAGGCAGCGCCTTCAGCTATGT +
Preference number: 3 (lower is better)
Translates to: SRGLQPGQGEGR*PTGLRQRLQLC
Trigger: ACATAGCTGAAGGCGCTGCCTGAGGCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR CAA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCAATGGGAGCCACATGTaGGCCAGATGTGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRNGSHM*ARCAWE
Trigger: CTCCCAGGCACATCTGGCCAACATGTGGCTCCCATT...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp GCATGCGTGCTTGGGCTGGACGGTGGACTTCACGTCTaGGCCGAGGTGCGTTCAAGCGAGAGGGCAGGAGTC +
Preference number: 3 (lower is better)
Translates to: ACVLGLDGGLHV*AEVRSSERAGV
Trigger: GACTCCTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR GCA 72 bp GGGATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTaGTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCAC +
Preference number: 3 (lower is better)
Translates to: GMGWDLPQAATS*LVHKSAGARRH
Trigger: GTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 72 bp CCTCTTCGTGGGGGTGGGGCTTCTCAAGGGCAGGCCTaGATGCTGGCCCAGACTTCAACTCAGCCTGGCGTG +
Preference number: 3 (lower is better)
Translates to: PLRGGGASQGQA*MLAQTSTQPGV
Trigger: CACGCCAGGCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp GCCTCCTCTGGAAGGGTTGTAGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGCCTGGATGCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: ASSGRVVASSWG*GFSRAGLDAGP
Trigger: TGGGCCAGCATCCAGGCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAACCCTTCCAGAGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp ACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTC +
Preference number: 3 (lower is better)
Translates to: TFSRFPKSCART*VAPARSGRGPF
Trigger: GAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
3UTR CCA 72 bp AGCCCCGGTGTAAGCATGCGTGCTTGGGCTGGACGGTaGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGA +
Preference number: 3 (lower is better)
Translates to: SPGVSMRAWAGR*TSRLRRGAFKR
Trigger: TCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATGCTTACACCGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CCA 72 bp TGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTaGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: WGGICHKPPQAA*CTRAQELAGTE
Trigger: CTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 72 bp CATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTC +
Preference number: 3 (lower is better)
Translates to: HFSRFPKSCART*VAPARSGRGPF
Trigger: GAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR-3UTR CAA 90 bp CCCTCAGTAGGTCTGCGTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTGGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: PSVGLRLRVDDARGLGLLVFRVV*RDQRGE
Trigger: CTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAAC...CAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 72 bp GCCTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTGCTaGTCACCCTCTGCCTGCTCGTCATCAGCATCTCGT +
Preference number: 3 (lower is better)
Translates to: ASTSCWASASAC*SPSACSSSASR
Trigger: ACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR GCA 72 bp TCGGCCTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTaGTGCTCACCCTCTGCCTGCTCGTCATCAGCATCT +
Preference number: 3 (lower is better)
Translates to: SASTSCWASASA*CSPSACSSSAS
Trigger: AGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CCA 72 bp GCGCAGGCCTTGGGAACGGTAATGGGAGCCACATGTTaGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGC +
Preference number: 3 (lower is better)
Translates to: AQALGTVMGATC*PDVPGRDRQEC
Trigger: GCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTACCGTTCCCAAGGCCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CCA 72 bp CCCACGCTGGGGTCTGCGAGACTGCTGGCCGGGCCCTaGCTCAAAGCTGGAGTCCAACAATCATTAACCCTG +
Preference number: 3 (lower is better)
Translates to: PTLGSARLLAGP*LKAGVQQSLTL
Trigger: CAGGGTTAATGATTGTTGGACTCCAGCTTTGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACCCCAGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CCA 72 bp GAAGGTGCCTCCTCTGGAAGGGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGGGCAGGCCTGGATGCT +
Preference number: 3 (lower is better)
Translates to: EGASSGRVVASS*GWGFSRAGLDA
Trigger: AGCATCCAGGCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp GGCCTAGAGTTGCCCCATGGAAAGCGGTGGGGAGCATaGGCTCTGCAGTCCAGTCCAGGCCACTACTTGCAG +
Preference number: 3 (lower is better)
Translates to: GLELPHGKRWGA*ALQSSPGHYLQ
Trigger: CTGCAAGTAGTGGCCTGGACTGGACTGCAGAGCCCATGCTCCCCACCGCTTTCCATGGGGCAACTCTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CAA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGGATGATGGATCCTCTTaGGCTACAAAGTACTTGACC +
Preference number: 3 (lower is better)
Translates to: RERILREIWRTGQPDRQTDDGSS*ATKYLT
Trigger: GGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATC...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CAA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAGGGGTCCTCTCGTCATaGGAAGGTGCCTCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: MGWDLPQAATSCLVHKSAGVLSS*EGASSG
Trigger: TCCAGAGGAGGCACCTTCCAATGACGAGAGGACCCC...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 72 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCG +
Preference number: 3 (lower is better)
Translates to: GRVYFLAFPKVV*KDVGGPSQVRP
Trigger: CGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
3UTR GCA 72 bp GTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTaGAATGACACACACACCAGGCCTCAGGACCCTGAC +
Preference number: 3 (lower is better)
Translates to: VALSPQCPGFIH*NDTHTRPQDPD
Trigger: GTCAGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR GCA 72 bp AGTTGCCCCATGGAAAGCGGTGGGGAGCATGGGCTCTaGAGTCCAGTCCAGGCCACTACTTGCAGCCATGTG +
Preference number: 3 (lower is better)
Translates to: SCPMESGGEHGL*SPVQATTCSHV
Trigger: CACATGGCTGCAAGTAGTGGCCTGGACTGGACTGCAGAGCCCATGCTCCCCACCGCTTTCCATGGGGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CCA 72 bp GCAGGCCTGGATGCTGGCCCAGACTTCAACTCAGCCTaGCGTGGGGAGCTGTCCCCTCTAACTAGGGTACAT +
Preference number: 3 (lower is better)
Translates to: AGLDAGPDFNSA*RGELSPLTRVH
Trigger: ATGTACCCTAGTTAGAGGGGACAGCTCCCCACGCCAGGCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp TGCCAGTACCCTCTTTCCAGCAGCTGTCCCAGGTGCTaGGGTCATGGGGACACTCAAAGGACTCAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: CQYPLSSSCPRC*GHGDTQRTQEA
Trigger: GGCCTCCTGAGTCCTTTGAGTGTCCCCATGACCCCAGCACCTGGGACAGCTGCTGGAAAGAGGGTACTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR TCA 72 bp CATTGCATGCACAAGCCCAGGTGGGAAATGCGTGTGTaGGCACAGGCAGGTTTAGCCTTGGGGTGGGGGACG +
Preference number: 3 (lower is better)
Translates to: HCMHKPRWEMRV*AQAGLALGWGT
Trigger: CGTCCCCCACCCCAAGGCTAAACCTGCCTGTGCTCACACACGCATTTCCCACCTGGGCTTGTGCATGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR GCA 72 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCG +
Preference number: 3 (lower is better)
Translates to: WVHTFLAFPKVV*KDVGGPSQVRP
Trigger: CGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR GCA 72 bp CCTTCAGTTTGGCCACTGGGGCCGGGAGCAGAGCTGTaGTTGGGTTTGCACTGGGTCCTGAATATGCCAGCA +
Preference number: 3 (lower is better)
Translates to: PSVWPLGPGAEL*LGLHWVLNMPA
Trigger: TGCTGGCATATTCAGGACCCAGTGCAAACCCAAGCACAGCTCTGCTCCCGGCCCCAGTGGCCAAACTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CCA 72 bp TTTTGCGGGACCAGCGAGGGGAGCGCGAGCGTCTCTTaGGAGTCTGGAGGCGGCTTGATAGGACGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: FCGTSEGSASVS*ESGGGLIGRVF
Trigger: AAAAACACGTCCTATCAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTCCCCTCGCTGGTCCCGCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp GATAGGCAGCGAGGAGGTAGGGAGGAGATGGGCAGGTaGATAGTTGGGATGAGGGCCAGAACAGCAGGTGAC +
Preference number: 3 (lower is better)
Translates to: DRQRGGREEMGR*IVGMRARTAGD
Trigger: GTCACCTGCTGTTCTGGCCCTCATCCCAACTATCCACCTGCCCATCTCCTCCCTACCTCCTCGCTGCCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CAA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTTCTGGGATAGAAGCCTaGTCCTCCGGAGTCACCATC +
Preference number: 3 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLSGIEA*SSGVTI
Trigger: GATGGTGACTCCGGAGGACAAGGCTTCTATCCCAGA...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR TCA 72 bp CGGGAGCAGAGCTGTGCTTGGGTTTGCACTGGGTCCTaGATATGCCAGCACTCACAAGTCCCCTCCCATAGG +
Preference number: 3 (lower is better)
Translates to: REQSCAWVCTGS*ICQHSQVPSHR
Trigger: CCTATGGGAGGGGACTTGTGAGTGCTGGCATATTCAGGACCCAGTGCAAACCCAAGCACAGCTCTGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR TCA 72 bp TCTTCCCTCCATCCAAGACCTATCCCCGTGGTAGGGTaGGGCCCATGTCAACGGCAGAATAGCCAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: SSLHPRPIPVVG*GPCQRQNSQGK
Trigger: CTTGCCCTGGCTATTCTGCCGTTGACATGGGCCTCACCCTACCACGGGGATAGGTCTTGGATGGAGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 72 bp CCCCCGCCACACACACTGATCACACACCACATTGCATaGACAAGCCCAGGTGGGAAATGCGTGTGTGAGCAC +
Preference number: 3 (lower is better)
Translates to: PPPHTLITHHIA*TSPGGKCVCEH
Trigger: GTGCTCACACACGCATTTCCCACCTGGGCTTGTGCATGCAATGTGGTGTGTGATCAGTGTGTGTGGCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR GCA 72 bp GCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTaGCCTGGGTTCATACATTTCTCGCGTTTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: ANAWTHVALSPQ*PGFIHFSRFPK
Trigger: CTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
3UTR CCA 72 bp TCCTTATTCAAAACGCATTCCTTACCGGCAAACGCCTaGACACACGTCGCCCTGTCCCCACAGTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: SLFKTHSLPANA*THVALSPQCPG
Trigger: CCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTAAGGAATGCGTTTTGAATAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR TCA 72 bp TGGGGGTGCCTCTGGCGTGTGGGCCTCCTCCTGGGATaGTGGATCCTCTTTGGCTACAAAGTACTTGACCTT +
Preference number: 3 (lower is better)
Translates to: WGCLWRVGLLLG*WILFGYKVLDL
Trigger: AAGGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp GGAGTAAGTGAAAGAACCTGTCCAAGGTTTAGCCCTTaGCCCGCACGCAGGCAGAGCTCCAGCCTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: GVSERTCPRFSP*PARRQSSSLSV
Trigger: AACAGAGAGGCTGGAGCTCTGCCTGCGTGCGGGCCAAGGGCTAAACCTTGGACAGGTTCTTTCACTTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CCA 72 bp CAGGGGACTCTTCCACTGAAAAGACCCTCTCTGGAGTaGAGGGTTTGTCCACAGTCAGGGTCTCCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: QGTLPLKRPSLE*RVCPQSGSPLG
Trigger: TCCCAGAGGAGACCCTGACTGTGGACAAACCCTCCACTCCAGAGAGGGTCTTTTCAGTGGAAGAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CCA 72 bp CCTGGGAAGACTGAAGGGCGGAGTGTGCATAGCATTTaGCAGAGTGCCAGGTGCCAGAAAGGGTACTCAATG +
Preference number: 3 (lower is better)
Translates to: PGKTEGRSVHSI*QSARCQKGYSM
Trigger: CATTGAGTACCCTTTCTGGCACCTGGCACTCTGCCAAATGCTATGCACACTCCGCCCTTCAGTCTTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CAA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGAGCTGTGCTTGGGTTaGCACTGGGTCCTGAATATG +
Preference number: 3 (lower is better)
Translates to: PCPHSALGSYISRVSQSRELCLG*HWVLNM
Trigger: CATATTCAGGACCCAGTGCAAACCCAAGCACAGCTC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 72 bp ATTCAATCTCTCCAAGACTCCGTTTATTTGATCCTCTaGCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGC +
Preference number: 3 (lower is better)
Translates to: IQSLQDSVYLIL*LLVISISWAPR
Trigger: GCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGATCAAATAAACGGAGTCTTGGAGAGATTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 72 bp ACTTCCTTCTTGGCAAATGTGAGCCACGCTACAAACTaGACAGGGTTCCTGGGAAGACTGAAGGGCGGAGTG +
Preference number: 3 (lower is better)
Translates to: TSFLANVSHATN*TGFLGRLKGGV
Trigger: CACTCCGCCCTTCAGTCTTCCCAGGAACCCTGTGCAGTTTGTAGCGTGGCTCACATTTGCCAAGAAGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CAA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGTCTGGGGTGGCAGTCTaGTCCGGCATGGGGGTTCTC +
Preference number: 3 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLSGVAV*SGMGVL
Trigger: GAGAACCCCCATGCCGGACAAGACTGCCACCCCAGA...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR TCA 72 bp GCTCAAAGCTGGAGTCCAACAATCATTAACCCTGCGTaGCTAGACCAGAGCTCGGCCAGGGGACACATTCAA +
Preference number: 3 (lower is better)
Translates to: AQSWSPTIINPA*LDQSSARGHIQ
Trigger: TTGAATGTGTCCCCTGGCCGAGCTCTGGTCTAGTCACGCAGGGTTAATGATTGTTGGACTCCAGCTTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR-3UTR CAA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCTCTGGGGAGGGGACTTaGTCAGGAGCCGGGATCTTC +
Preference number: 3 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPSGEGT*SGAGIF
Trigger: GAAGATCCCGGCTCCTGACAAAGTCCCCTCCCCAGA...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CAA 90 bp GACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTTCTGGGGTGGGGACTTaGTCAGGAGCTGGGATCTTC +
Preference number: 3 (lower is better)
Translates to: DLLQGFLRREVMELNVISSGVGT*SGAGIF
Trigger: GAAGATCCCAGCTCCTGACAAAGTCCCCACCCCAGA...AGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR-3UTR CAA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTAGAGAAGTGATGGAATaGAATGTCATCTCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: PCPHSALGSYISRVSQSRREVME*NVISGG
Trigger: TCCACCAGAGATGACATTCAATTCCATCACTTCTCT...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR GCA 72 bp GGGCGGAGTGTGCATAGCATTTGGCAGAGTGCCAGGTaGCAGAAAGGGTACTCAATGTCCCTATTATTGTTT +
Preference number: 3 (lower is better)
Translates to: GRSVHSIWQSAR*QKGYSMSLLLF
Trigger: AAACAATAATAGGGACATTGAGTACCCTTTCTGGCACCTGGCACTCTGCCAAATGCTATGCACACTCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CAA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCATTTAGCAAATTTTaGCCAGTACCCTCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGPFSKF*PVPSFQ
Trigger: CTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR-3UTR CAA 90 bp CCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCCAGCAGCTGTATGGGGACAGCCACATaGGCCAAAGGTTTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: PMIVHLANFCQYPLSSSCMGTAT*AKGFRD
Trigger: GTCCCTGAAACCTTTGGCCAATGTGGCTGTCCCCAT...ACAGCTGCTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR TCA 72 bp TGTTCAGAACTTTACCAAATTCATCGTTTCAGACGTTaGCACCACCACACCCGAGCATCAGTCTGTACACAG +
Preference number: 3 (lower is better)
Translates to: CSELYQIHRFRR*HHHTRASVCTQ
Trigger: CTGTGTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGGTAAAGTTCTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR GCA 72 bp AGTGCTAGGCATACACAGTATTTGTTGACTAGTGGCTaGACAGATTTATATACAGACATACCCGCCCCCACA +
Preference number: 3 (lower is better)
Translates to: SARHTQYLLTSG*TDLYTDIPAPT
Trigger: TGTGGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTGTGTATGCCTAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp CAGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCCGCGCACATCCGCGGTaGGGGCGGGCGCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QLGGVRAGEKARPAPPRRRAHPR*GRAPED
Trigger: GTCTTCCGGCGCCCGCCCTCACCGCGGATGTGCGCG...GCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCGGACAAGCGCGGCTaGGCTCCAGTCGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQAPDKRG*APVGRP
Trigger: GGGGCGTCCGACTGGAGCTCAGCCGCGCTTGTCCGG...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCTTCCCGGAGCCCGCCTaGGGCGTGGAGGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: QLGGVRAGEKARPAPPRRFPEPA*GVEAQR
Trigger: ACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAA...GCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp TGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGGCCGGACCCAGTGTATaGGGCCGCGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGGTVRNAEAQALPPRRAGPSV*GRGTRW
Trigger: CCAGCGCGTCCCGCGGCCGCATACACTGGGTCCGGC...CCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCGGGTGGGGGTGCCTCTaGCGTGTGGGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPGWGCL*RVGLLL
Trigger: CAGGAGGAGGCCCACACGCCAGAGGCACCCCCACCC...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGTCCCCTGCATCACCTaGACCTCCAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAVPCIT*TSSRRR
Trigger: GCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCGACAGGGAGGCCAGCTaGGAGGGGTCCGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPDREAS*EGSELA
Trigger: CGCCAGCTCGGACCCCTCCCAGCTGGCCTCCCTGTC...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCATCCTGCGGGAGATCTaGCGCACCGGGCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QLGGVRAGEKARPAPPRRILREI*RTGQPD
Trigger: GTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGAT...GCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCGGGGGAGTAGGGGTCTaGAGCCCGGACAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPGGVGV*SPDRER
Trigger: CCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCC...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCCAGGCTGCTCAGCTTaGGAGGCCGCTGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPPGCSA*EAAGDQ
Trigger: CTGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCCTGG...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGGGTGGGGGTGCCTCTaGCGTGTGGGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSGWGCL*RVGLLL
Trigger: CAGGAGGAGGCCCACACGCCAGAGGCACCCCCACCC...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCGTCCCCTGCATCACCTaGACCTCCAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVVPCIT*TSSRRR
Trigger: GCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCATCAGCATCTCGTaGGCGCCCCGCCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNVISIS*APRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGAC...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGCCCGCCTGGGGCGTaGAGGCTCAGCGTCCCTATC +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRSPPGA*RLSVPI
Trigger: GATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCT...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp CGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCAGCGGGTGGCTGGGCTaGCCCACGGACAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RQAPSACSSSASRGRPARSGWLG*PTDRLV
Trigger: CACCAGCCTGTCCGTGGGTCAGCCCAGCCACCCGCT...GCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQASSRRR*SFSLFS
Trigger: GCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGA...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPSSRRR*SFSLFS
Trigger: GCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGA...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCAAGCGCGAACGGATCCTaGGGGAGATCTGGCGCACCG +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGASANGS*GRSGAP
Trigger: CGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCATCTGAGGAAGGAGGCTaGGGTGGGGGTGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGASEEGG*GGGASG
Trigger: GCCAGAGGCACCCCCACCCCAGCCTCCTTCCTCAGA...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCTCTGAGGAAGGAGGCTaGGGTGGGGGTGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRSEEGG*GGGASG
Trigger: GCCAGAGGCACCCCCACCCCAGCCTCCTTCCTCAGA...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCAGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGAASSWG*GFSRAG
Trigger: GCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGC...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCGAGGCCTCTGCTCGTTaGGGGGCGCCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPEASAR*GAPPLQ
Trigger: CTGAAGAGGAGGCGCCCCCCAACGAGCAGAGGCCTC...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGTCCCCTGCATCACCTaGACCTCCAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPVPCIT*TSSRRR
Trigger: GCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCCCTGCGGCAAACGCCTaGACACACGTCGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRPAANA*THVALS
Trigger: GGACAGGGCGACGTGTGTCCAGGCGTTTGCCGCAGG...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474766.1
CDS-3UTR CCA 90 bp ACGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGGTCATCAGCATCTCGTaGGCGCCCCGCCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TASPLCLLVISISWAPRPVISIS*APRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGAC...CGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCGGGAGGTGAGCTTCTaGCTGTCCCTGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQAREVSF*LSLLGV
Trigger: GACACCCAGCAGGGACAGTCAGAAGCTCACCTCCCG...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPASACG*RAGSGT
Trigger: AGTCCCAGACCCCGCGCGTCATCCACACGCAGACGC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR GCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVSSRRR*SFSLFS
Trigger: GCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGA...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCGACCCACGGACAGGCTaGTGGGCTGGGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQAPSACSSSASRGRPARDPRTG*WAGEQQ
Trigger: CTGCTGCTCCCCAGCCCACCAGCCTGTCCGTGGGTC...GCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACTCCGAAGCGGGTGGCTaGGCTGACCCACGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNSEAGG*ADPRTG
Trigger: GCCTGTCCGTGGGTCAGCCCAGCCACCCGCTTCGGA...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCGGTGCCTCTGGCGTGTaGGCCTCCTCCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPGASGV*ASSWDD
Trigger: ATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACC...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCAAGCGCGAGCGTCTCTTaGGAGTCTGGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGASASVS*ESGGGL
Trigger: CAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCT...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp AAACTTTCCGCCGGCTGGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCGGCCGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLSAGWSLGPCPARAAAAVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...GGCCGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAATCCTGCGGGAGATCTaGCGCACCGGGCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPILREI*RTGQPD
Trigger: GTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGAT...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGCCCGCAGCAGCACCCTaGAGCCCGAGGACGACGACG +
Preference number: 4 (lower is better)
Translates to: RERILREIWRTGQPDRQTPAAAP*SPRTTT
Trigger: CGTCGTCGTCCTCGGGCTCCAGGGTGCTGCTGCGGG...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCAGGGGCCTCGGGTGTTTaGCAGGATGACCTAGCACCG +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGAGASGV*QDDLAP
Trigger: CGGTGCTAGGTCATCCTGCCAAACACCCGAGGCCCC...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCGCTCCCAGGTGCTACTaGGCGTGGACCGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGAPRCY*AWTATP
Trigger: GGGGGTGGCGGTCCACGCCCAGTAGCACCTGGGAGC...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TATCCTCCATCCCGCCCCGGGACGGCGGAACCGGGCCTCAGCTGGGGACCTCACGCGCTCTCTCCAGGGTaGAACCTGGGCCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: YPPSRPGTAEPGLSWGPHALSPG*NLGPRL
Trigger: GAGCCGCGGGCCCAGGTTCCACCCTGGAGAGAGCGC...GTGAGGTCCCCAGCTGAGGCCCGGTTCCGCCGTCCCGGGGCGGGATGGAGGATA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCAAAACTTTCCGCCGGCTaGTCCCTCGGTCCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGAKLSAG*SLGPCP
Trigger: GGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp GTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCACCATTGGGGCCTaGGTCTCGGGAGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VPGRDRQECGGPGPAPAQATIGA*VSGGEL
Trigger: AAGCTCACCTCCCGAGACTCAGGCCCCAATGGTGGC...CTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGCAGCTGTCCCAGGTaGTGGGGTCATGGGGACACT +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRSSCPR*WGHGDT
Trigger: AGTGTCCCCATGACCCCAGCACCTGGGACAGCTGCT...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCATGTTGGCCAGATGTaGCTGGGAGGGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPHVGQM*LGGTVR
Trigger: CCTGACGGTCCCTCCCAGGCACATCTGGCCAACATG...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAAGCGCGAACGGATCCTaGGGGAGATCTGGCGCACCG +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPSANGS*GRSGAP
Trigger: CGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR GCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTATGGGGTCTGCGAGACTaGTGGCCGGGCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLWGLRD*WPGPGS
Trigger: TGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACCCCA...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTGCGCCCTCCAGAGCCTaGCAGCTCCCTCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLAPSRA*QLPLTA
Trigger: GGCCGTCAGAGGGAGCTGCCAGGCTCTGGAGGGCGC...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCGAGCCGGGATCTTCTTaGAGCTGGGGGCGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVREPGSS*SWGRSL
Trigger: CAGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTC...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCGAGCCGGGATCTTCTTaGAGCTGGGGGCGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPEPGSS*SWGRSL
Trigger: CAGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTC...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCTCTGAGGAAGGAGGCTaGGGTGGGGGTGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTSEEGG*GGGASG
Trigger: GCCAGAGGCACCCCCACCCCAGCCTCCTTCCTCAGA...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCAACTCAGCCTGGCGTaGGGAGCTGTCCCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPQLSLA*GAVPSN
Trigger: GTTAGAGGGGACAGCTCCCCACGCCAGGCTGAGTTG...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGAGGCCTCTGCTCGTTaGGGGGCGCCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPEASAR*GAPPLQ
Trigger: CTGAAGAGGAGGCGCCCCCCAACGAGCAGAGGCCTC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGAGCGCGAGCGTCTCTTaGGAGTCTGGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VPGRDRQECGGPGPAPAQSASVS*ESGGGL
Trigger: CAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCT...CTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCTCAGTAGGTCTGCGTCTGCGGTCCCCTGCATCACCTaGACCTCCAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: QVRPRSLPRPTLSRSASAVPCIT*TSSRRR
Trigger: GCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC...CGCAGACGCAGACCTACTGAGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSGVWDF*VPCITW
Trigger: CCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCC...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCGTCTGCGTCTGCGTGTaGATGACGCGCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTVCVCV*MTRGVW
Trigger: CCAGACCCCGCGCGTCATCCACACGCAGACGCAGAC...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp GTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPGRDRQECGGPGPAPAQSCART*VAPARS
Trigger: TGACCTGGCTGGGGCCACCCACGTCCTTGCACACGA...CTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVSCART*VAPARS
Trigger: TGACCTGGCTGGGGCCACCCACGTCCTTGCACACGA...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGCGACCAGACCGGCGTaGCGCCGTGCTAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLATRPA*RRARQS
Trigger: ACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTCCCGCAGCAGCACCCTaGAGCCCGAGGACGACGACG +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLPAAAP*SPRTTT
Trigger: CGTCGTCGTCCTCGGGCTCCAGGGTGCTGCTGCGGG...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCTTACCGGCAAACGCCTaGACACACGTCGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPLPANA*THVALS
Trigger: GGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTAA...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGGGCAGCCGGACCTGCTaGGCACAGGCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELGSRTC*AQARWG
Trigger: GCCCCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCC...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TATCCTCCATCCCGCCCCGGGACGGCGGAACCGGGCCTCAGCTGGGGACCTCACCGGAAGGGGTCGGGGTaGGCTCCAGGCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YPPSRPGTAEPGLSWGPHRKGSG*APGWEK
Trigger: CTTCTCCCAGCCTGGAGCCCACCCCGACCCCTTCCG...GTGAGGTCCCCAGCTGAGGCCCGGTTCCGCCGTCCCGGGGCGGGATGGAGGATA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp ACGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCCACCTGGCCTGGCTTaGCCACGGCAAGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TASPLCLLVISISWAPRPPPGLA*PRQAPS
Trigger: AGAGGGGGCTTGCCGTGGCCAAGCCAGGCCAGGTGG...CGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 72 bp GGCCCGCACGCAGGCAGAGCTCCAGCCTCTCTGTTGTaGCTGTTAGTGGCCTGGGGGCGGGTCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: GPHAGRAPASLL*LLVAWGRVPAA
Trigger: CGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGGAGCTCTGCCTGCGTGCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCGATCTGCCCTCTACTTaGACCCAGTCTCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRDLPST*TQSRDW
Trigger: CCAGTCCCGAGACTGGGTTCAAGTAGAGGGCAGATC...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGACCGCCACCCCCTaGGAGGCTCCCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRWTATP*EAPFPS
Trigger: ACTGGGGAAGGGAGCCTCTCAGGGGGTGGCGGTCCA...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCAGCCCAGGTGGGAAATaGGTGTGTGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRASPGGK*VCEHRQ
Trigger: CTGCCTGTGCTCACACACGCATTTCCCACCTGGGCT...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGCCCAGGTGGGAAATaGGTGTGTGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRSPGGK*VCEHRQ
Trigger: CTGCCTGTGCTCACACACGCATTTCCCACCTGGGCT...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCCAAGCCCCCTCTGCCTaGTCGTCATCAGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRQAPSA*SSSASR
Trigger: ACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTG...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp AGCGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAAGCCGCTTCTCCCACCTaGCCTGGCTTGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SANGSCGRSGAPGSRTGKAASPT*PGLATA
Trigger: TGCCGTGGCCAAGCCAGGCCAGGTGGGAGAAGCGGC...TTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTGCCCCGCAGGGTCTCTaGGATCTCCTGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLAPQGL*DLLHQA
Trigger: CGCCTGGTGCAGGAGATCCCAGAGACCCTGCGGGGC...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCTGGGTTACCAAGGCTTaGGGGCCCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPWVTKA*GPTVQQ
Trigger: TTGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCCA...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCATTTGGAAGCCACCATTaGGGCCTGAGTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGAFGSHH*GLSLGR
Trigger: CCTCCCGAGACTCAGGCCCCAATGGTGGCTTCCAAA...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGTCTGAGGAAGGAGGCTaGGGTGGGGGTGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RERILREIWRTGQPDRQTSEEGG*GGGASG
Trigger: GCCAGAGGCACCCCCACCCCAGCCTCCTTCCTCAGA...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCAACTCAGCCTGGCGTaGGGAGCTGTCCCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVQLSLA*GAVPSN
Trigger: GTTAGAGGGGACAGCTCCCCACGCCAGGCTGAGTTG...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCTCTCAAGGGCAGGCCTaGATGCTGGCCCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQASQGQA*MLAQTS
Trigger: TGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGA...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCTCTCAAGGGCAGGCCTaGATGCTGGCCCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRSQGQA*MLAQTS
Trigger: TGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGA...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTGVWDF*VPCITW
Trigger: CCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCC...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPGVWDF*VPCITW
Trigger: CCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNSCART*VAPARS
Trigger: TGACCTGGCTGGGGCCACCCACGTCCTTGCACACGA...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCATGGGAGCCACATGTTaGCCAGATGTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPMGATC*PDVPGR
Trigger: CCTCCCAGGCACATCTGGCCAACATGTGGCTCCCAT...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCAGAAGCAGCTTTGCCTaGAAGGGGCCTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPRSSFA*KGPPRR
Trigger: CCTCCTAGGAGGCCCCTTCCAGGCAAAGCTGCTTCT...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTCCGGACAAGCGCGGCTaGGCTCCAGTCGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAPDKRG*APVGRP
Trigger: GGGGCGTCCGACTGGAGCTCAGCCGCGCTTGTCCGG...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAACGATCTCCCCAGCTTaGAGCTTCAGCTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPTISPA*SFSSSA
Trigger: GGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGT...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCGACTTCTGGGTCCCCTaGATCACCTGGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTDFWVP*ITWTSS
Trigger: GCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTC...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR GCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGACTTCTGGGTCCCCTaGATCACCTGGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPDFWVP*ITWTSS
Trigger: GCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR GCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAACGTCTGCGCCGAGGTaGGTTCAAGCGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLTSAPR*VQARGQ
Trigger: CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGT...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CAGCTCCCAGGTGCTACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCAGCGCGAACGGATCCTaGGGGAGATCTGGCGCACCG +
Preference number: 4 (lower is better)
Translates to: QLPGATGRGPPPPERLPSSANGS*GRSGAP
Trigger: CGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT...GGAAGGGAGCCTCTCAGGGGGTGGCGGTCCACGCCCAGTAGCACCTGGGAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GCGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCGGCACCGGCGGTTTCCCTCTaGCTGCTCGTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: ARTDPAGDLAHRAAGPAAPAVSL*LLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGGAAACCGCCGG...TGCCGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474766.1
CDS-3UTR GCA 90 bp AAACTTTCCGCCGGCTGGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCGGCCAGAAGCCCACAGGCCTaGACCCAGCCTCACACACAG +
Preference number: 4 (lower is better)
Translates to: KLSAGWSLGPCPARAAAARSPQA*TQPHTQ
Trigger: CTGTGTGTGAGGCTGGGTGCAGGCCTGTGGGCTTCT...GGCCGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CTTCCCTTCCCGGAGCCCGCCTGGGGCGTGGAGGCTCAGCGTCCCTATCCTCCATCCCTCTGTTACTCCTaGCCCCAGCGACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPFPEPAWGVEAQRPYPPSLCYS*PQRPPG
Trigger: GCCTGGGGGTCGCTGGGGGCAGGAGTAACAGAGGGA...TGGAGGATAGGGACGCTGAGCCTCCACGCCCCAGGCGGGCTCCGGGAAGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp AAACTTTCCGCCGGCTGGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCGGCCGCACCCTGGGCCGCATaGACTATTACTGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: KLSAGWSLGPCPARAAAAAPWAA*TITDGP
Trigger: GGGCCCATCAGTAATAGTGCATGCGGCCCAGGGTGC...GGCCGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCCTTCAGTTTGGCCACTaGGGCCGGGAGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RQAPSACSSSASRGRPARLQFGH*GREQSC
Trigger: ACAGCTCTGCTCCCGGCCCCAGTGGCCAAACTGAAG...GCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp ACGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGGGCAAGCCTTCAGTTTaGCCACTGGGGCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TASPLCLLVISISWAPRPGKPSV*PLGPGA
Trigger: TGCTCCCGGCCCCAGTGGCCAAACTGAAGGCTTGCC...CGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCAGGCTGCTCAGCTTaGGAGGCCGCTGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALPGCSA*EAAGDQ
Trigger: CTGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCCTGG...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp AGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCATGTCTGCAGGTAGTCTaGAGGGCTGTCATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SWEGSELARRPARLLPGACLQVV*RAVIGQ
Trigger: CTGGCCTATGACAGCCCTCCAGACTACCTGCAGACA...TGCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCCTTTGCTGGGCCCAGTaGTGGCTGTTGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRLCWAQ*WLLLAS
Trigger: AGAAGCTAGCAACAGCCACCACTGGGCCCAGCAAAG...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCCGTTGCTGGGGAGTCTaGGTTTTGGATCGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPRCWGV*VLDRFR
Trigger: CCGAAAGCGATCCAAAACCCAGACTCCCCAGCAACG...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCAGTCTTGTCCGGCATaGGGGTTCTCTTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPQSCPA*GFSSQR
Trigger: CCTCTGTGAAGAGAACCCCCATGCCGGACAAGACTG...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACGAGGTGGAGTTCCCTaGGATAGAGGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPRGGVP*DRGLVP
Trigger: GGGGACAAGGCCTCTATCCCAGGGAACTCCACCTCG...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCGGTGCCTCTGGCGTGTaGGCCTCCTCCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGGASGV*ASSWDD
Trigger: ATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACC...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSVVASS*GWGFSR
Trigger: CCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAAC...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCGGAAGGTGCCTCCTCTaGAAGGGTTGTAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQAGRCLL*KGCSLF
Trigger: GAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCC...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLGVWDF*VPCITW
Trigger: CCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGACAGGGAGGCCAGCTaGGAGGGGTCCGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQDREAS*EGSELA
Trigger: CGCCAGCTCGGACCCCTCCCAGCTGGCCTCCCTGTC...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCTTCCAGTCCAGCATaGGTCTGGGGAAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQAPSSPA*VWGREA
Trigger: TGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGG...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGGGGACGGGATGGGGTaGGATCTGCCACAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAEGDGMG*DLPQAA
Trigger: GGCGGCTTGTGGCAGATCCCACCCCATCCCGTCCCC...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCCCACACCTAGAACCTaGGGTCTTTCGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPPTPRT*GLSEVG
Trigger: TCCCACTTCCGAAAGACCCCAGGTTCTAGGTGTGGG...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TATCCTCCATCCCGCCCCGGGACGGCGGAACCGGGCCTCAGCTGGGGACCTCACCGCCCTCTTGCCCGCTaGCGGTTCCCTAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: YPPSRPGTAEPGLSWGPHRPLAR*RFPNAL
Trigger: AAGGGCATTAGGGAACCGCCAGCGGGCAAGAGGGCG...GTGAGGTCCCCAGCTGAGGCCCGGTTCCGCCGTCCCGGGGCGGGATGGAGGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp CCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCTCTGTGGTCTTGCTaGGTACTTTTACCACGTCCC +
Preference number: 4 (lower is better)
Translates to: PGRDRQECGGPGPAPAQAPLWSC*VLLPRP
Trigger: GGGACGTGGTAAAAGTACTCAGCAAGACCACAGAGG...GGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGGCCTCCTCCTGGGATaGTGGATCCTCTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNGLLLG*WILFGY
Trigger: GTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCC...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp CCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PPATRPAWRRARQSLLSRASACG*RAGSGT
Trigger: AGTCCCAGACCCCGCGCGTCATCCACACGCAGACGC...GCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp GTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGACCGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: VWMTRGVWDFWVPCITWTASACG*RAGSGT
Trigger: AGTCCCAGACCCCGCGCGTCATCCACACGCAGACGC...GGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCGACTTCTGGGTCCCCTaGATCACCTGGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGDFWVP*ITWTSS
Trigger: GCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTC...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR GCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGAGCGCGAACGGATCCTaGGGGAGATCTGGCGCACCG +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELSANGS*GRSGAP
Trigger: CGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR GCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACCCACAAGCTGCTTGGTaGACAAGAGCGCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNPQAAW*TRAQEL
Trigger: GAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGG...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp TTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCCCACAGCTCCCAGGTaGTACTGGGCGTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: FGLLLTLCLLVISISWAPPTAPR*YWAWTA
Trigger: GGCGGTCCACGCCCAGTAGCACCTGGGAGCTGTGGG...GGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCCGGGCAGCCGGACCTaGTGGGCACAGGCACGCTGG +
Preference number: 4 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQPGSRT*WAQARW
Trigger: CCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCCCGG...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCCAGGCTGGAGTACAGTaGCACGATCACGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: RQAPSACSSSASRGRPARQAGVQ*HDHGSP
Trigger: TGGTGAGCCGTGATCGTGCCACTGTACTCCAGCCTG...GCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCATGGGTTACCAAGGCTTaGGGGCCCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPWVTKA*GPTVQQ
Trigger: TTGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCCA...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCGCTGGGGGCGTTCTCTaGAGCTGGGGGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FGLLLTLCLLVISISWAPAGGVL*SWGPLW
Trigger: CCAGAGAGGCCCCCAGCTCCAGAGAACGCCCCCAGC...GGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACTCTCAAGGGCAGGCCTaGATGCTGGCCCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNSQGQA*MLAQTS
Trigger: TGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGA...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCGTCTCTTGGGAGTCTaGAGGCGGCTTGATAGGACG +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTRLLGV*RRLDRT
Trigger: CGTCCTATCAAGCCGCCTCCAGACTCCCAAGAGACG...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACCCCCTCACCATCCGGTaGATAAAAATAGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNPLTIR*IKIAAR
Trigger: GCGCGCGGCTATTTTTATCCACCGGATGGTGAGGGG...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTGTCATCAGCATCTCGTaGGCGCCCCGCCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVVISIS*APRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGAC...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGGGACCGGCAAACGCCTaGACACACGTCGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELGPANA*THVALS
Trigger: GGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTCC...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCCTGCTGGCCGGGCCCTaGCTCAAAGCTGGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRLLAGP*LKAGVQ
Trigger: TTGGACTCCAGCTTTGAGCCAGGGCCCGGCCAGCAG...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CAA 72 bp CTTGGCCCGCACGCAGGCAGAGCTCCAGCCTCTCTGTaGTTGCTGTTAGTGGCCTGGGGGCGGGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGPHAGRAPASL*LLLVAWGRVPA
Trigger: GGCAGGGACCCGCCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGGAGCTCTGCCTGCGTGCGGGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGTCAGGCGGAGTAAGTaGAAGAACCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAVRRSK*KNLSKV
Trigger: AACCTTGGACAGGTTCTTTCACTTACTCCGCCTGAC...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCGGGTGTTTGGCAGGATaGCCTAGCACCGGACAAGCG +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRGCLAG*PSTGQA
Trigger: CGCTTGTCCGGTGCTAGGTCATCCTGCCAAACACCC...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAATCATTAACCCTGCGTaGCTAGACCAGAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPIINPA*LDQSSA
Trigger: GGCCGAGCTCTGGTCTAGTCACGCAGGGTTAATGAT...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp AGCGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACCGGGAGCAGAGCTGTaGTTGGGTTTGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: SANGSCGRSGAPGSRTGKPGAEL*LGLHWV
Trigger: GACCCAGTGCAAACCCAAGCACAGCTCTGCTCCCGG...TTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCTGGCAGAGTGCCAGGTaGCAGAAAGGGTACTCAATG +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVWQSAR*QKGYSM
Trigger: CATTGAGTACCCTTTCTGGCACCTGGCACTCTGCCA...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp CCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PPATRPAWRRARQSLLSRSSRRR*SFSLFS
Trigger: GCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGA...GCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCATCCCGGGAGAGGAGCTaGCCGCGGAAGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSASRERS*PRKGSG
Trigger: CCCCGACCCCTTCCGCGGGCAGCTCCTCTCCCGGGA...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGTTGCTGTTAGTGGCCTaGGGGCGGGTCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQLLLVA*GRVPAA
Trigger: CGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAA...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp ACGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGGAGGAGATGGGCAGGTaGATAGTTGGGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TASPLCLLVISISWAPRPEEMGR*IVGMRA
Trigger: GGCCCTCATCCCAACTATCCACCTGCCCATCTCCTC...CGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp ACGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGAGCTGTCCCAGGTGCTaGGGTCATGGGGACACTCAA +
Preference number: 4 (lower is better)
Translates to: TASPLCLLVISISWAPRPSCPRC*GHGDTQ
Trigger: TTGAGTGTCCCCATGACCCCAGCACCTGGGACAGCT...CGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACTTTGCTGGGCCCAGTaGTGGCTGTTGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPLCWAQ*WLLLAS
Trigger: AGAAGCTAGCAACAGCCACCACTGGGCCCAGCAAAG...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCATGTCTTGGCTTTGCTaGGCCCAGTGGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTMSWLC*AQWWLL
Trigger: CAACAGCCACCACTGGGCCCAGCAAAGCCAAGACAT...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCTCTGACTGTCCCTGCTaGGTGTCCGAGATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTSDCPC*VSEMSW
Trigger: CCAAGACATCTCGGACACCCAGCAGGGACAGTCAGA...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCTACGAACCCCCACTTTaGAAGCCACCATTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTYEPPL*KPPLGP
Trigger: AGGCCCCAATGGTGGCTTCCAAAGTGGGGGTTCGTA...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGGATCTTCTTGGAGCTaGGGGCGTTCTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLGSSWS*GRSLEL
Trigger: CAGCTCCAGAGAACGCCCCCAGCTCCAAGAAGATCC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACGTCTCTTGGGAGTCTaGAGGCGGCTTGATAGGACG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLRLLGV*RRLDRT
Trigger: CGTCCTATCAAGCCGCCTCCAGACTCCCAAGAGACG...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGTCTCCAGTGCGCGGCTaGAGTCCGAAGGAGACACCC +
Preference number: 4 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAESPVRG*SPKETP
Trigger: GGGTGTCTCCTTCGGACTCCAGCCGCGCACTGGAGA...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGTCCCCACAGTGCCCTaGGTTCATACATTTCTCGCG +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPVPTVP*VHTFLA
Trigger: CGCGAGAAATGTATGAACCCAGGGCACTGTGGGGAC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR TCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCTGAGTCTCGGGAGGTaGGCTTCTGACTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALLSLGR*ASDCPC
Trigger: GCAGGGACAGTCAGAAGCTCACCTCCCGAGACTCAG...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp TGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCTGGCCCACAGGCTGGGAAATGCGTGTGTaGGCACAGGCAGGTTTAGCC +
Preference number: 4 (lower is better)
Translates to: WGSRGLQPGQGEGRWPTGWEMRV*AQAGLA
Trigger: GGCTAAACCTGCCTGTGCTCACACACGCATTTCCCA...GCCTGTGGGCCAGCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGAGCTCGTCCTCCTTCTaGGCGCGGTATCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQSSSSF*ARYPAR
Trigger: CCTGGCCGGATACCGCGCGCAGAAGGAGGACGAGCT...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR GCA 90 bp CAGCTCCCAGGTGCTACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCCAAGCCGCCACAAGCTaGTTGGTGCACAAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: QLPGATGRGPPPPERLPSQAATS*LVHKSA
Trigger: TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTG...GGAAGGGAGCCTCTCAGGGGGTGGCGGTCCACGCCCAGTAGCACCTGGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCACACACCACATTGCATaGACAAGCCCAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSTHHIA*TSPGGK
Trigger: TTTCCCACCTGGGCTTGTGCATGCAATGTGGTGTGT...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCCTGCTGCTCACCCTCTaGCTGCTCGTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRLLLTL*LLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAG...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCATAGCCTTGATCTCCTaGGCTCAAGCGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTIALIS*AQAILP
Trigger: TGGGAGGATCGCTTGAGCCCAGGAGATCAAGGCTAT...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGTTCCACAAAGTTGGATaGGAAGGCTCCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RERILREIWRTGQPDRQTFHKVG*EGSQLP
Trigger: GGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAA...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCGCAGCGCCAACTCGTCTaGGGCCTCAGGCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: HALLLMGPGSRCKALGVPQRQLV*GLRLVV
Trigger: GACTACCAGCCTGAGGCCCCAGACGAGTTGGCGCTG...CGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCTTGATTGGGGGTGGTaGGAGTACAAAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: CLGGTVRNAEAQALPPRRLDWGW*EYKVVW
Trigger: CCAGACAACTTTGTACTCCCACCACCCCCAATCAAG...CCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCAGATACCACTTTCCGTaGGACCAGCTTCTTGATTGG +
Preference number: 4 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRARYHFP*DQLLDW
Trigger: CCAATCAAGAAGCTGGTCCCACGGAAAGTGGTATCT...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGTGTGGGCCTCCTCCTaGGATGATGGATCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLVWASS*DDGSSL
Trigger: CAAAGAGGATCCATCATCCCAGGAGGAGGCCCACAC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCTCAGTAGGTCTGCGTCTGCGGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: QVRPRSLPRPTLSRSASAVVASS*GWGFSR
Trigger: CCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAAC...CGCAGACGCAGACCTACTGAGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGGGAAGGTGCCTCCTCTaGAAGGGTTGTAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RERILREIWRTGQPDRQTGRCLL*KGCSLF
Trigger: GAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCC...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCAAAGGCTCTTTCTATaGGGGGCACCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVQRLFL*GAPPLL
Trigger: CAAAAGAGGAGGTGCCCCCCATAGAAAGAGCCTTTG...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGAGTGTCTGCGTCTGCGTGTaGATGACGCGCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRWTSRLRRGAFKREGRSVCVCV*MTRGVW
Trigger: CCAGACCCCGCGCGTCATCCACACGCAGACGCAGAC...ACTCCTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCGGCTTGGGCTGGACGGTaGACTTCACGTCTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: HALLLMGPGSRCKALGVPAWAGR*TSRLRR
Trigger: TCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGC...CGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCGCCCTGGCTCAAAGCTaGAGTCCAACAATCATTAAC +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRALAQS*SPTIIN
Trigger: GTTAATGATTGTTGGACTCCAGCTTTGAGCCAGGGC...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCGCCACAAGCTGCTTaGTGCACAAGAGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALPPQAA*CTRAQE
Trigger: CTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGG...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GCATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCACCCAGTCTCGGGACTaGGGGAGTAGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ACTITDGPRLPLQGARGTTQSRD*GSRGLQ
Trigger: CTGCAGACCCCTACTCCCCCAGTCCCGAGACTGGGT...GGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCAACCCACAGATGCTGTaGACTAGACTAGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPNPQML*TRLGSA
Trigger: AGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGCGCTTTCGGCCAGGGTaGTACGAACCCCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQRFRPG*YEPPLW
Trigger: CCAAAGTGGGGGTTCGTATCACCCTGGCCGAAAGCG...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGGATCTGCCCTCTACTTaGACCCAGTCTCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALDLPST*TQSRDW
Trigger: CCAGTCCCGAGACTGGGTTCAAGTAGAGGGCAGATC...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGACCACGATCTCCCCAGCTTaGAGCTTCAGCTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: VWMTRGVWDFWVPCITWTTISPA*SFSSSA
Trigger: GGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGT...GGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTGCTTCTGACTGTCCCTaGTGGGTGTCCGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLASDCP*WVSEMS
Trigger: AGACATCTCGGACACCCAGCAGGGACAGTCAGAAGC...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGACTTCTGGGTCCCCTaGATCACCTGGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQDFWVP*ITWTSS
Trigger: GCTGGAGGTCCAGGTGATGCAGGGGACCCAGAAGTC...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CTGCGGCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCACGGTGTAAGCATGCGTaGTTGGGCTGGACGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LRQTPGHTSPCPHSALGSRCKHA*LGWTVD
Trigger: GTCCACCGTCCAGCCCAAGCACGCATGCTTACACCG...TGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474766.1
CDS-3UTR GCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCGCCTTCAGCTATGTCTaGAATTTCCTCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVAFSYV*NFLSPF
Trigger: AAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGC...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp GTGCTTGGGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGTCTGCTTCGGCCTGCTaGTCACCCTCTGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VLGLDGGLHVCAEVRSSESASAC*SPSACS
Trigger: CGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGA...CTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp TACCGGCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATTCGTGCTGGGCGTCTaGTTCGGCCTGCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: YRQTPGHTSPCPHSALGSFVLGV*FGLLLT
Trigger: GGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAA...TGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGAGGGCATGTGGACCATaGGGACAGCCACATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAERACGP*GQPHWP
Trigger: TGGCCAATGTGGCTGTCCCCATGGTCCACATGCCCT...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPAIPQS*MGRLPA
Trigger: AGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNAIPQS*MGRLPA
Trigger: AGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGC...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGTGGGTTACCAAGGCTTaGGGGCCCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELWVTKA*GPTVQQ
Trigger: TTGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCCA...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGGCTCTTCCTCCTGACTaGACACAGAGCGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALALPPD*TQSVAG
Trigger: CCCAGCAACGCTCTGTGTCCAGTCAGGAGGAAGAGC...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAGCTGGGGGCGTTCTCTaGAGCTGGGGGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSAAGGVL*SWGPLW
Trigger: CCAGAGAGGCCCCCAGCTCCAGAGAACGCCCCCAGC...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCGTGTGGGCCTCCTCCTaGGATGATGGATCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRVWASS*DDGSSL
Trigger: CAAAGAGGATCCATCATCCCAGGAGGAGGCCCACAC...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCGGCAGGCCTGGATGCTaGCCCAGACTTCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: VLGVCFGLLLTLCLLVISGRPGC*PRLQLS
Trigger: GCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCC...GCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGTCTCAAGGGCAGGCCTaGATGCTGGCCCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELSQGQA*MLAQTS
Trigger: TGAAGTCTGGGCCAGCATCCAGGCCTGCCCTTGAGA...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVASSWG*GFSRAG
Trigger: GCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGC...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGCGTCTCTTGGGAGTCTaGAGGCGGCTTGATAGGACG +
Preference number: 4 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAERLLGV*RRLDRT
Trigger: CGTCCTATCAAGCCGCCTCCAGACTCCCAAGAGACG...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CCA 90 bp TACCGGCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCAAGCGCGAGCGTCTCTTaGGAGTCTGGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: YRQTPGHTSPCPHSALGSSASVS*ESGGGL
Trigger: CAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCT...TGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCCCCTGCATCACCTaGACCTCCAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKVPCIT*TSSRRR
Trigger: GCGCCGGCGGCTGGAGGTCCAGGTGATGCAGGGGAC...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGATGACGCGCGGGGTCTaGGACTTCTGGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEMTRGV*DFWVPC
Trigger: GCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCAT...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCATGACGCGCGGGGTCTaGGACTTCTGGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCMTRGV*DFWVPC
Trigger: GCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCAT...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGATGACGCGCGGGGTCTaGGACTTCTGGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQMTRGV*DFWVPC
Trigger: GCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCAT...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTATGACGCGCGGGGTCTaGGACTTCTGGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVMTRGV*DFWVPC
Trigger: GCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCAT...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTGTAAGCATGCGTGCTTaGGCTGGACGGTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLVSMRA*AGRWTS
Trigger: TGAAGTCCACCGTCCAGCCCAAGCACGCATGCTTAC...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTCCCGCAGCAGCACCCTaGAGCCCGAGGACGACGACG +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLPAAAP*SPRTTT
Trigger: CGTCGTCGTCCTCGGGCTCCAGGGTGCTGCTGCGGG...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAAGTCCAGCATGGGTCTaGGGAAGAGAAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLSPAWV*GREAAL
Trigger: CAAAGCTGCTTCTCTTCCCCAGACCCATGCTGGACT...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTACCCAGTCTCGGGACTaGGGGAGTAGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHATQSRD*GSRGLQ
Trigger: CTGCAGACCCCTACTCCCCCAGTCCCGAGACTGGGT...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CTTGCCCGCTGGCGGTTCCCTAATGCCCTTCGAGTAGGGGTTACAGGCCTCGCCGGGGTCTTTCGGAAGTaGGACAACCCCCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: LARWRFPNALRVGVTGLAGVFRK*DNPHPS
Trigger: GGACGGGTGGGGGTTGTCCCACTTCCGAAAGACCCC...GGCGAGGCCTGTAACCCCTACTCGAAGGGCATTAGGGAACCGCCAGCGGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGGCAAGCCCCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCGACCTCCCCAGCAACTaGGCACTTCACAAACACATT +
Preference number: 4 (lower is better)
Translates to: RQAPSACSSSASRGRPARDLPSN*ALHKHI
Trigger: AATGTGTTTGTGAAGTGCCCAGTTGCTGGGGAGGTC...GCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGCCTTCTTGGCAAATGTaGGCCACGCTACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: RERILREIWRTGQPDRQTPSWQM*ATLQTA
Trigger: TGCAGTTTGTAGCGTGGCTCACATTTGCCAAGAAGG...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp GTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCGGCCTCCTCCTGGGATaGTGGATCCTCTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: VLGVCFGLLLTLCLLVISGLLLG*WILFGY
Trigger: GTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCC...GCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGTTCATACACTGCAATaGCACACACACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLVHTLQ*HTHQAS
Trigger: TGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAAC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCGGGCCTTTACCGGGCTaGTGTGCTCTTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGGPLPG*CALPPD
Trigger: GTCAGGAGGAAGAGCACAGCAGCCCGGTAAAGGCCC...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAAAGTACTTGACCTTCTaGAGGGCTTCCTCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLKYLTF*RASSEE
Trigger: CTCTTCGGAGGAAGCCCTGCAGAAGGTCAAGTACTT...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GTGCTTGGGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGCATGTTGGCCAGATGTaGCTGGGAGGGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: VLGLDGGLHVCAEVRSSEHVGQM*LGGTVR
Trigger: CCTGACGGTCCCTCCCAGGCACATCTGGCCAACATG...CTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCGATCACACACCACATTaGATGCACAAGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRDHTPH*MHKPRW
Trigger: CCACCTGGGCTTGTGCATGCAATGTGGTGTGTGATC...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGCAGCGCCAACTCGTCTaGGGCCTCAGGCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEQRQLV*GLRLVV
Trigger: GACTACCAGCCTGAGGCCCCAGACGAGTTGGCGCTG...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGCTTGATTGGGGGTGGTaGGAGTACAAAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RERILREIWRTGQPDRQTLDWGW*EYKVVW
Trigger: CCAGACAACTTTGTACTCCCACCACCCCCAATCAAG...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGCAGTCTTGTCCGGCATaGGGGTTCTCTTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAEQSCPA*GFSSQR
Trigger: CCTCTGTGAAGAGAACCCCCATGCCGGACAAGACTG...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGGCGTTCTCTGGAGCTaGGGGCCTCTCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKGVLWS*GPLWGG
Trigger: GCCACCCCAGAGAGGCCCCCAGCTCCAGAGAACGCC...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCTCAGTAGGTCTGCGTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTGCGAGGTGGAGTTCCCTaGGATAGAGGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSVGLRLRVDDARGLGLLRGGVP*DRGLVP
Trigger: GGGGACAAGGCCTCTATCCCAGGGAACTCCACCTCG...CAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGAGTCGAGGTGGAGTTCCCTaGGATAGAGGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GRWTSRLRRGAFKREGRSRGGVP*DRGLVP
Trigger: GGGGACAAGGCCTCTATCCCAGGGAACTCCACCTCG...ACTCCTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCATTGAATGTCATCTCTaGTGGACACCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPIECHL*WTPLLQ
Trigger: CTGAAGAAGAGGTGTCCACCAGAGATGACATTCAAT...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGGGTGGGGGTGCCTCTaGCGTGTGGGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VYFLAFPKVVCKDVGGPSGWGCL*RVGLLL
Trigger: CAGGAGGAGGCCCACACGCCAGAGGCACCCCCACCC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGAGCGCGAGCGTCTCTTaGGAGTCTGGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQSASVS*ESGGGL
Trigger: CAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCT...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGCGACCAGACCGGCGTaGCGCCGTGCTAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKATRPA*RRARQS
Trigger: ACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGC...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGTTGGCCAGATGTGCCTaGGAGGGACCGTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQLARCA*EGPSGM
Trigger: CATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAA...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCCATGCGTGCTTGGGCTaGACGGTGGACTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: VLGVCFGLLLTLCLLVISHACLG*TVDFTS
Trigger: AGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATG...GCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGGTAAGCATGCGTGCTTaGGCTGGACGGTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELVSMRA*AGRWTS
Trigger: TGAAGTCCACCGTCCAGCCCAAGCACGCATGCTTAC...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTGTCATCAGCATCTCGTaGGCGCCCCGCCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SPCPHSALGSYISRVSQSVISIS*APRPRP
Trigger: GGGCCGCGGGCGGGGCGCCCACGAGATGCTGATGAC...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CCA 90 bp GTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGACCTCCTCTTGGCTTTGCTaGGCCCAGTGGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VWMTRGVWDFWVPCITWTSSWLC*AQWWLL
Trigger: CAACAGCCACCACTGGGCCCAGCAAAGCCAAGAGGA...GGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GCACCACCCCCACCCACCAACCCGACGATACAGCACACCTGCCCGCATTCACTTCGGCCACGGGCACCCTaGGCCGCATGCACTATTACT +
Preference number: 4 (lower is better)
Translates to: APPPPTNPTIQHTCPHSLRPRAP*AACTIT
Trigger: AGTAATAGTGCATGCGGCCCAGGGTGCCCGTGGCCG...AAGTGAATGCGGGCAGGTGTGCTGTATCGTCGGGTTGGTGGGTGGGGGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCGCCTCTACTTCGTGCTaGGCGTCTGCTTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCASTSC*ASASAC
Trigger: GCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGC...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTCTGAGTCTCGGGAGGTaGGCTTCTGACTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVLSLGR*ASDCPC
Trigger: GCAGGGACAGTCAGAAGCTCACCTCCCGAGACTCAG...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTCGCTTTCGGCCAGGGTaGTACGAACCCCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVRFRPG*YEPPLW
Trigger: CCAAAGTGGGGGTTCGTATCACCCTGGCCGAAAGCG...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCTGTGCTCTTCCTCCTaGCTGGACACAGAGCGTTGC +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGLCSSS*LDTERC
Trigger: GCAACGCTCTGTGTCCAGTCAGGAGGAAGAGCACAG...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCCATTTAGCAAATTTTTaGCAGTACCCTCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRHLANF*QYPLSS
Trigger: GCTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATG...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp CGGCCTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTTCTGACTGTCCCTaGTGGGTGTCCGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: RPLLRAGRLLRPAAHPLPASDCP*WVSEMS
Trigger: AGACATCTCGGACACCCAGCAGGGACAGTCAGAAGC...AGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTAAGTACTTGACCTTCTaGAGGGCTTCCTCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLKYLTF*RASSEE
Trigger: CTCTTCGGAGGAAGCCCTGCAGAAGGTCAAGTACTT...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGCTCGTCATTGGAAGGTaGCTCCTCTGGAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELLVIGR*LLWKGC
Trigger: ACAACCCTTCCAGAGGAGGCACCTTCCAATGACGAG...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAATGGGGTCTGCGAGACTaGTGGCCGGGCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKWGLRD*WPGPGS
Trigger: TGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACCCCA...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGCCTTCAGCTATGTCTaGAATTTCCTCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLAFSYV*NFLSPF
Trigger: AAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTCTCGTCCGCCTGCTCTaGGCTGTAGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHALVRLL*AVAEVH
Trigger: GTGAACTTCAGCTACAGCCCAGAGCAGGCGGACGAG...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGTGTCCGAGATGTCTTaGCTTTGCTGGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQVSEMS*LCWAQW
Trigger: CCACTGGGCCCAGCAAAGCCAAGACATCTCGGACAC...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCGTACGAACCCCCACTTTaGAAGCCACCATTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HALLLMGPGSRCKALGVPYEPPL*KPPLGP
Trigger: AGGCCCCAATGGTGGCTTCCAAAGTGGGGGTTCGTA...CGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGTTGCTGGGGAGTCTaGGTTTTGGATCGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: FGLLLTLCLLVISISWAPRCWGV*VLDRFR
Trigger: CCGAAAGCGATCCAAAACCCAGACTCCCCAGCAACG...GGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGGGGGCCTCTCTGGGGTaGCAGTCTTGTCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVGASLG*QSCPAW
Trigger: CCATGCCGGACAAGACTGCCACCCCAGAGAGGCCCC...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTGGATCTTCTTGGAGCTaGGGGCGTTCTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAGSSWS*GRSLEL
Trigger: CAGCTCCAGAGAACGCCCCCAGCTCCAAGAAGATCC...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGAGACCCTCTCTGGAGTaGAGGGTTTGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAERPSLE*RVCPQS
Trigger: TGACTGTGGACAAACCCTCCACTCCAGAGAGGGTCT...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCAGAGGGGCCATCTTTaGATTAGGGACTTTATCCAT +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTQRGHL*IRDFIH
Trigger: ATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTG...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAGGTGCCTCTGGCGTGTaGGCCTCCTCCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSAGASGV*ASSWDD
Trigger: ATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACC...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCGGCAGGCCTGGATGCTaGCCCAGACTTCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCGRPGC*PRLQLS
Trigger: GCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCC...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLASSWG*GFSRAG
Trigger: GCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGC...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCGGGTCCTCTCGTCATTaGAAGGTGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FGLLLTLCLLVISISWAPGSSRH*KVPPLE
Trigger: TTCCAGAGGAGGCACCTTCCAATGACGAGAGGACCC...GGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTGCGACCAGACCGGCGTaGCGCCGTGCTAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPATRPA*RRARQS
Trigger: ACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGC...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGTTGGCCAGATGTGCCTaGGAGGGACCGTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQLARCA*EGPSGM
Trigger: CATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAA...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCATGGGAGCCACATGTTaGCCAGATGTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGMGATC*PDVPGR
Trigger: CCTCCCAGGCACATCTGGCCAACATGTGGCTCCCAT...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAATCCTGCGGGAGATCTaGCGCACCGGGCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKILREI*RTGQPD
Trigger: GTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGAT...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCGCAGCAGCACCCTaGAGCCCGAGGACGACGACG +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGPAAAP*SPRTTT
Trigger: CGTCGTCGTCCTCGGGCTCCAGGGTGCTGCTGCGGG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CAA 72 bp CGCGCAGGCCTTGGGAACGGTAATGGGAGCCACATGTaGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: RAGLGNGNGSHM*ARCAWEGPSGM
Trigger: CATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTACCGTTCCCAAGGCCTGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
3UTR CAA 72 bp CAGAGCAGCATGGATGCCCCGCGAAGGGACATGGAGTaGCTCAGCAACAGCCTGGCTGCCTACGCGCACATC +
Preference number: 4 (lower is better)
Translates to: QSSMDAPRRDME*LSNSLAAYAHI
Trigger: GATGTGCGCGTAGGCAGCCAGGCTGTTGCTGAGCAACTCCATGTCCCTTCGCGGGGCATCCATGCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CAA 72 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTaGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSC*VHKSAGARRHR
Trigger: TCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp GCATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCCCTCTGTGGTCTTGCTaGGTACTTTTACCACGTCCC +
Preference number: 4 (lower is better)
Translates to: ACTITDGPRLPLQGARGTPLWSC*VLLPRP
Trigger: GGGACGTGGTAAAAGTACTCAGCAAGACCACAGAGG...GGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGCTGTGCTCTTCCTCCTaGCTGGACACAGAGCGTTGC +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAELCSSS*LDTERC
Trigger: GCAACGCTCTGTGTCCAGTCAGGAGGAAGAGCACAG...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp GTGCTTGGGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGTGGGAAATGCGTGTGTaGGCACAGGCAGGTTTAGCC +
Preference number: 4 (lower is better)
Translates to: VLGLDGGLHVCAEVRSSEWEMRV*AQAGLA
Trigger: GGCTAAACCTGCCTGTGCTCACACACGCATTTCCCA...CTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCAGGGACCGTCAGGAATaGGGAGGCCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGRDRQE*GGPGPA
Trigger: GGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCT...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTCCGCCATTTCTCCAGTaGGCGGCTGGAGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLPPFLQ*AAGVRR
Trigger: CCTTCGGACTCCAGCCGCGCACTGGAGAAATGGCGG...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAACGTCTGCGCCGAGGTaGGTTCAAGCGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKTSAPR*VQARGQ
Trigger: CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGT...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCTGGGTTCATACACTaGAATGACACACACACCAGG +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALPGFIH*NDTHTR
Trigger: CCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGG...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCAAATGAAAGAAAGCTaGATTCTCAGTGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVQMKES*ILSDSV
Trigger: GACTGAGTCACTGAGAATGCAGCTTTCTTTCATTTG...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCACACCTTCGGACTaGCTCGGCCCCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGPTPSD*LGPHSS
Trigger: GGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCGAAGGGACATGGAGTTaGTCAGCAACAGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGEGTWS*SATAWL
Trigger: CAGCCAGGCTGTTGCTGAGCAACTCCATGTCCCTTC...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp AGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCTTGCTGTTAGTGGCCTaGGGGCGGGTCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: RVYFLAFPKVVCKDVGGPLLLVA*GRVPAA
Trigger: CGCGGCAGGGACCCGCCCCCAGGCCACTAACAGCAA...GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GTAATGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGACGAGGACTTCCATaGTTTCCGGGGCGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VMGATCWPDVPGRDRQECGRGLP*FPGRPP
Trigger: TGGAGGGCGCCCCGGAAACCATGGAAGTCCTCGTCC...GCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR CCA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCAGAGTACAAAGTTGTCTaGAAAAACTCCTCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPEYKVV*KNSSSS
Trigger: GGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTC...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCAGTCTTGTCCGGCATaGGGGTTCTCTTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGQSCPA*GFSSQR
Trigger: CCTCTGTGAAGAGAACCCCCATGCCGGACAAGACTG...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTGGGGCCTCTCTGGGGTaGCAGTCTTGTCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPGASLG*QSCPAW
Trigger: CCATGCCGGACAAGACTGCCACCCCAGAGAGGCCCC...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGACTTTGTCAGGAGCTaGGATCTTCCCCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQDFVRS*DLPRGG
Trigger: TCCACCTCGGGGAAGATCCCAGCTCCTGACAAAGTC...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCGAGTCAGGGTCTCCTCTaGGATGATGGAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HALLLMGPGSRCKALGVPSQGLL*DDGVLW
Trigger: CCAGAGAACTCCATCATCCCAGAGGAGACCCTGACT...CGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACAGAGGGGCCATCTTTaGATTAGGGACTTTATCCAT +
Preference number: 4 (lower is better)
Translates to: QAPPPATRPAWRRARQSLQRGHL*IRDFIH
Trigger: ATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTG...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGGTGCCTCTGGCGTGTaGGCCTCCTCCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRGASGV*ASSWDD
Trigger: ATCATCCCAGGAGGAGGCCCACACGCCAGAGGCACC...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGAGGGTGGGGGTGCCTCTaGCGTGTGGGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGGWGCL*RVGLLL
Trigger: CAGGAGGAGGCCCACACGCCAGAGGCACCCCCACCC...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEVVASS*GWGFSR
Trigger: CCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAAC...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGGGTCCTCTCGTCATTaGAAGGTGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQGSSRH*KVPPLE
Trigger: TTCCAGAGGAGGCACCTTCCAATGACGAGAGGACCC...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGGGGGTCTGGGACTTCTaGGTCCCCTGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVGVWDF*VPCITW
Trigger: CCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCC...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp AGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVYFLAFPKVVCKDVGGPVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTCATGCGTGCTTGGGCTaGACGGTGGACTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVHACLG*TVDFTS
Trigger: AGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATG...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGATCCTGCGGGAGATCTaGCGCACCGGGCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GAVLGRVYFLAFPKVVCKILREI*RTGQPD
Trigger: GTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGAT...CTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTGTGCTCTTCCTCTTaGCTTTGCTGGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQLCSSS*LCWAQW
Trigger: CCACTGGGCCCAGCAAAGCCAAGAGGAAGAGCACAG...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTGGTCTGCGAGACTGCTaGCCGGGCCCTGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPGLRDC*PGPGSK
Trigger: CTTTGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACC...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCAACCCACAGATGCTGTaGACTAGACTAGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRNPQML*TRLGSA
Trigger: AGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CAA 72 bp GTTTTGCGGGACCAGCGAGGGGAGCGCGAGCGTCTCTaGGGAGTCTGGAGGCGGCTTGATAGGACGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VLRDQRGERERL*GVWRRLDRTCF
Trigger: AAAACACGTCCTATCAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTCCCCTCGCTGGTCCCGCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAATGTCATAGGCCAGGCTaGTCAGCTTGGGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKCHRPG*SAWEAA
Trigger: AGCGGCCTCCCAAGCTGAGCAGCCTGGCCTATGACA...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGCTGGACACAGAGCGTTaGTGGGGAGTCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAELDTER*WGVWVL
Trigger: CAAAACCCAGACTCCCCAGCAACGCTCTGTGTCCAG...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGGGGCCTTTACCGGGCTaGTGTGCTCTTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVGPLPG*CALPPD
Trigger: GTCAGGAGGAAGAGCACAGCAGCCCGGTAAAGGCCC...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CCCTCAGTAGGTCTGCGTCTGCGTGTGGATGACGCGCGGGGTCTGGGACTTCTGCTCGTCATTGGAAGGTaGCTCCTCTGGAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PSVGLRLRVDDARGLGLLLVIGR*LLWKGC
Trigger: ACAACCCTTCCAGAGGAGGCACCTTCCAATGACGAG...CAGAAGTCCCAGACCCCGCGCGTCATCCACACGCAGACGCAGACCTACTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCTCGTCATTGGAAGGTaGCTCCTCTGGAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGLVIGR*LLWKGC
Trigger: ACAACCCTTCCAGAGGAGGCACCTTCCAATGACGAG...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGAAGGGACCGTCAGGAATaGGGAGGCCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGRDRQE*GGPGPA
Trigger: GGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCT...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CCGGTGGATAAAAATAGCCGCGCGCAGGCCTTGGGAACGGTAATGGGAGCCACAGGTGGACTTCACGTCTaGGCCGAGGTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PVDKNSRAQALGTVMGATGGLHV*AEVRSS
Trigger: GCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACC...TGTGGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCTATTTTTATCCACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCGATCACACACCACATTaGATGCACAAGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGDHTPH*MHKPRW
Trigger: CCACCTGGGCTTGTGCATGCAATGTGGTGTGTGATC...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTGCTCACCCTCTGCCTaGTCGTCATCAGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVCSPSA*SSSASR
Trigger: ACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCA...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGCCAGAGCAGCATGGATaGCCCGCGAAGGGACATGGA +
Preference number: 4 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVPEQHG*PAKGHG
Trigger: TCCATGTCCCTTCGCGGGGCATCCATGCTGCTCTGG...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTTTCTCCCACCTGGCCTaGCTTGGCCACGGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SPCPHSALGSYISRVSQSFSHLA*LGHGKP
Trigger: GGGCTTGCCGTGGCCAAGCCAGGCCAGGTGGGAGAA...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGAGGGGCCTCGGGTGTTTaGCAGGATGACCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGGASGV*QDDLGG
Trigger: GCCGCCGAGGTCATCCTGCCAAACACCCGAGGCCCC...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTACTTTGCACCATCTTTaGGGCCTCGGGTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHATLHHL*GLGCLA
Trigger: TGCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGT...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCTTGATTGGGGGTGGTaGGAGTACAAAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FGLLLTLCLLVISISWAPLDWGW*EYKVVW
Trigger: CCAGACAACTTTGTACTCCCACCACCCCCAATCAAG...GGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGGGGCCTCTCTGGGGTaGCAGTCTTGTCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRGASLG*QSCPAW
Trigger: CCATGCCGGACAAGACTGCCACCCCAGAGAGGCCCC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGCTGGGGGCGTTCTCTaGAGCTGGGGGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQAGGVL*SWGPLW
Trigger: CCAGAGAGGCCCCCAGCTCCAGAGAACGCCCCCAGC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGAGACCCTCTCTGGAGTaGAGGGTTTGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQRPSLE*RVCPQS
Trigger: TGACTGTGGACAAACCCTCCACTCCAGAGAGGGTCT...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTGTGTGGGCCTCCTCCTaGGATGATGGATCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVVWASS*DDGSSL
Trigger: CAAAGAGGATCCATCATCCCAGGAGGAGGCCCACAC...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGGCAGGCCTGGATGCTaGCCCAGACTTCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKGRPGC*PRLQLS
Trigger: GCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCC...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTGAGGCCTCTGCTCGTTaGGGGGCGCCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPCPHSALGSYISRVSQSEASAR*GAPPLQ
Trigger: CTGAAGAGGAGGCGCCCCCCAACGAGCAGAGGCCTC...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAAGCGCGAGCGTCTCTTaGGAGTCTGGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKSASVS*ESGGGL
Trigger: CAAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCT...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGTCTGCGTCTGCGTGTaGATGACGCGCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGVCVCV*MTRGVW
Trigger: CCAGACCCCGCGCGTCATCCACACGCAGACGCAGAC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTTCTCCAGTGCGCGGCTaGAGTCCGAAGGAGACACCC +
Preference number: 4 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPSPVRG*SPKETP
Trigger: GGGTGTCTCCTTCGGACTCCAGCCGCGCACTGGAGA...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GTAAGTGAAAGAACCTGTCCAAGGTTTAGCCCTTGGCCCGCACGCAGGCAGAGCTCCCCGGCGCACAGCTaGATTCCGGAATCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: VSERTCPRFSPWPARRQSSPAHS*IPESRP
Trigger: CGGCCTAGATTCCGGAATCCAGCTGTGCGCCGGGGA...GCTCTGCCTGCGTGCGGGCCAAGGGCTAAACCTTGGACAGGTTCTTTCACTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGCTTGGGCTGGACGGTaGACTTCACGTCTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: VYFLAFPKVVCKDVGGPSAWAGR*TSRLRR
Trigger: TCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGGGGCCTCGGGTGTTTaGCAGGATGACCTAGCACCG +
Preference number: 4 (lower is better)
Translates to: HTFLAFPKVVCKDVGGPSGASGV*QDDLAP
Trigger: CGGTGCTAGGTCATCCTGCCAAACACCCGAGGCCCC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCTTTTTGATGCAAAGTTaGTTAAACCCACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSFLMQS*LNPQML
Trigger: CAGCATCTGTGGGTTTAACCAACTTTGCATCAAAAA...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGAACCGGGCCTCAGCTaGGGACCTCACCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RARQSLLSRVSQSRVQGREPGLS*GPHQGA
Trigger: CGCCCCCTGGTGAGGTCCCCAGCTGAGGCCCGGTTC...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CAA 72 bp TCAGTTTGGCCACTGGGGCCGGGAGCAGAGCTGTGCTaGGGTTTGCACTGGGTCCTGAATATGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: SVWPLGPGAELC*GLHWVLNMPAL
Trigger: GAGTGCTGGCATATTCAGGACCCAGTGCAAACCCAAGCACAGCTCTGCTCCCGGCCCCAGTGGCCAAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp AGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCCGGGAGGTGAGCTTCTaGCTGTCCCTGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RVYFLAFPKVVCKDVGGPREVSF*LSLLGV
Trigger: GACACCCAGCAGGGACAGTCAGAAGCTCACCTCCCG...GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp GTGCTTGGGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGGTTCATACACTGCAATaGCACACACACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VLGLDGGLHVCAEVRSSEVHTLQ*HTHQAS
Trigger: TGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAAC...CTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGAGTAAGTACTTGACCTTCTaGAGGGCTTCCTCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRWTSRLRRGAFKREGRSKYLTF*RASSEE
Trigger: CTCTTCGGAGGAAGCCCTGCAGAAGGTCAAGTACTT...ACTCCTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CCCAGAGGGGCCATCTTTGGATTAGGGACTTTATCCATAGGTGGGGCTTCTAGGTCCAGCCGCCGGCGCTaGTCCTTCTCGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRGAIFGLGTLSIGGASRSSRRR*SFSLFS
Trigger: GCTGAAGAGCGAGAAGGAGCAGCGCCGGCGGCTGGA...CCTAGAAGCCCCACCTATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTAGGGACCGTCAGGAATaGGGAGGCCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGRDRQE*GGPGPA
Trigger: GGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCT...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGGGTTCATACACTaGAATGACACACACACCAGG +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGPGFIH*NDTHTR
Trigger: CCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGG...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTCCACAAGCTGCTTGGTaGACAAGAGCGCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRPQAAW*TRAQEL
Trigger: GAGCTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGG...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGGTGGGCAAAAATACCTaGCCGCACATTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQVGKNT*PHIHRT
Trigger: TGTTCTGTGAATGTGCGGGCAGGTATTTTTGCCCAC...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCTTGTTGACTAGTGGCTaGACAGATTTATATACAGAC +
Preference number: 4 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTLLTSG*TDLYTD
Trigger: GTCTGTATATAAATCTGTGCAGCCACTAGTCAACAA...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGCGTCTGCTTCGGCCTaGTGCTCACCCTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQASASA*CSPSAC
Trigger: GCAGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp GGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGTCGGCCTCTACTTCGTaGTGGGCGTCTGCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: GAVLGRVYFLAFPKVVCKSASTS*WASASA
Trigger: GGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCGA...CTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACAGCAACAGCCTGGCTaGCTACGCGCACATCCGCGG +
Preference number: 4 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGQQQPG*LRAHPR
Trigger: CCGCGGATGTGCGCGTAGGCAGCCAGGCTGTTGCTG...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGCTCGTCCGCCTGCTCTaGGCTGTAGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVLVRLL*AVAEVH
Trigger: GTGAACTTCAGCTACAGCCCAGAGCAGGCGGACGAG...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GTAATGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCCTCGTCCGCCTGCTCTaGGCTGTAGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: VMGATCWPDVPGRDRQECLVRLL*AVAEVH
Trigger: GTGAACTTCAGCTACAGCCCAGAGCAGGCGGACGAG...GCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGACCAGATACCACTTTCCGTaGGACCAGCTTCTTGATTGG +
Preference number: 4 (lower is better)
Translates to: VWMTRGVWDFWVPCITWTRYHFP*DQLLDW
Trigger: CCAATCAAGAAGCTGGTCCCACGGAAAGTGGTATCT...GGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTTTGGAAGCCACCATTaGGGCCTGAGTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVFGSHH*GLSLGR
Trigger: CCTCCCGAGACTCAGGCCCCAATGGTGGCTTCCAAA...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCGGTGGATAAAAATAGCCGCGCGCAGGCCTTGGGAACGGTAATGGGAGCCACAGGGGAGTCTGGGTTTTaGATCGCTTTCGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PVDKNSRAQALGTVMGATGESGF*IAFGQG
Trigger: ACCCTGGCCGAAAGCGATCCAAAACCCAGACTCCCC...TGTGGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCTATTTTTATCCACCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGCGTTCTCTGGAGCTaGGGGCCTCTCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRGVLWS*GPLWGG
Trigger: GCCACCCCAGAGAGGCCCCCAGCTCCAGAGAACGCC...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCAGAGGGGCCATCTTTaGATTAGGGACTTTATCCAT +
Preference number: 4 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALQRGHL*IRDFIH
Trigger: ATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTG...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGCCTCTTCGTGGGGGTaGGGCTTCTCAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AVLGRVYFLAFPKVVCKDASSWG*GFSRAG
Trigger: GCCTGCCCTTGAGAAGCCCCACCCCCACGAAGAGGC...GTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAACGTCTCTTGGGAGTCTaGAGGCGGCTTGATAGGACG +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKRLLGV*RRLDRT
Trigger: CGTCCTATCAAGCCGCCTCCAGACTCCCAAGAGACG...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTCCCCTCACCATCCGGTaGATAAAAATAGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRPLTIR*IKIAAR
Trigger: GCGCGCGGCTATTTTTATCCACCGGATGGTGAGGGG...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGCTGTTGCTAGCTTCTTaGCTGTGGGGAGGGATGTTT +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAELLLAS*LWGGMF
Trigger: AAACATCCCTCCCCACAGTCAAGAAGCTAGCAACAG...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTATACACAGTATTTGTTaGCTAGTGGCTGCACAGATT +
Preference number: 4 (lower is better)
Translates to: APPPATRPAWRRARQSLLIHSIC*LVAAQI
Trigger: AATCTGTGCAGCCACTAGTCAACAAATACTGTGTAT...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp GTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCTACCGGACCTGCACATaGGCTCAGAGCTACCCCACA +
Preference number: 4 (lower is better)
Translates to: VYFLAFPKVVCKDVGGPSYRTCT*AQSYPT
Trigger: TGTGGGGTAGCTCTGAGCTCATGTGCAGGTCCGGTA...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp CACACAGAGCAAGCGCGCGCGCATTCCTTATTCAAAACGCATTCCTTACCGGCACGCATGCACTATTACTaGTGGGCCCCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HTEQARAHSLFKTHSLPARMHYY*WAPAPA
Trigger: AGCGGGAGCCGGGGCCCATCAGTAATAGTGCATGCG...TGCCGGTAAGGAATGCGTTTTGAATAAGGAATGCGCGCGCGCTTGCTCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAACTGGACACAGAGCGTTaGTGGGGAGTCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKLDTER*WGVWVL
Trigger: CAAAACCCAGACTCCCCAGCAACGCTCTGTGTCCAG...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAACGGTTTCCCTCTGCCTaGTCGTCATCAGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKRFPSA*SSSASR
Trigger: ACGAGATGCTGATGACGAGCAGGCAGAGGGAAACCG...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474766.1
CDS-3UTR GCA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAACAAGCCGCCACAAGCTaGTTGGTGCACAAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKQAATS*LVHKSA
Trigger: TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTG...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGGATGGGGTGGGATCTaGCACAAGCCGCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRGWGGI*HKPPQA
Trigger: AGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTGTGGGCAAAAATACCTaGCCGCACATTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAVGKNT*PHIHRT
Trigger: TGTTCTGTGAATGTGCGGGCAGGTATTTTTGCCCAC...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGGTGGGGAGGGCATGTaGACCATGGGGACAGCCACA +
Preference number: 4 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGGGEGM*TMGTAT
Trigger: TGTGGCTGTCCCCATGGTCCACATGCCCTCCCCACC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGGGCAGGTGGATAGTTaGGATGAGGGCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: HTFLAFPKVVCKDVGGPSGQVDS*DEGQNS
Trigger: GCTGTTCTGGCCCTCATCCCAACTATCCACCTGCCC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTTTCCACAAAGTTGGATaGGAAGGCTCCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLFHKVG*EGSQLP
Trigger: GGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAA...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GTAATGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCTGTCTGCAGGTAGTCTaGAGGGCTGTCATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VMGATCWPDVPGRDRQECCLQVV*RAVIGQ
Trigger: CTGGCCTATGACAGCCCTCCAGACTACCTGCAGACA...GCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp TACCGGCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCACTTCTTGATTGGGGGTaGTGGGAGTACAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: YRQTPGHTSPCPHSALGSLLDWG*WEYKVV
Trigger: GACAACTTTGTACTCCCACCACCCCCAATCAAGAAG...TGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGACCAGCTTCTTGATTaGGGGTGGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEDQLLD*GWWEYK
Trigger: TTTGTACTCCCACCACCCCCAATCAAGAAGCTGGTC...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GTAAGTGAAAGAACCTGTCCAAGGTTTAGCCCTTGGCCCGCACGCAGGCAGAGCGGATCTTCTTGGAGCTaGGGGCGTTCTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSERTCPRFSPWPARRQSGSSWS*GRSLEL
Trigger: CAGCTCCAGAGAACGCCCCCAGCTCCAAGAAGATCC...GCTCTGCCTGCGTGCGGGCCAAGGGCTAAACCTTGGACAGGTTCTTTCACTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GTAATGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAAGGTGCCTCCTCTaGAAGGGTTGTAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VMGATCWPDVPGRDRQECGRCLL*KGCSLF
Trigger: GAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCC...GCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTCAAAGGCTCTTTCTATaGGGGGCACCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PATRPAWRRARQSLLSRVQRLFL*GAPPLL
Trigger: CAAAAGAGGAGGTGCCCCCCATAGAAAGAGCCTTTG...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYVQGRG*PQPGQA
Trigger: GGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCAC...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AVLGRVYFLAFPKVVCKDSCART*VAPARS
Trigger: TGACCTGGCTGGGGCCACCCACGTCCTTGCACACGA...GTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp GTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCTTGGCCAGATGTGCCTaGGAGGGACCGTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: VYFLAFPKVVCKDVGGPSLARCA*EGPSGM
Trigger: CATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAA...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAATCCCCGGCGCACAGCTaGATTCCGGAATCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQSPAHS*IPESRP
Trigger: CGGCCTAGATTCCGGAATCCAGCTGTGCGCCGGGGA...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAAGTCCAGCATGGGTCTaGGGAAGAGAAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSASPAWV*GREAAL
Trigger: CAAAGCTGCTTCTCTTCCCCAGACCCATGCTGGACT...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCTGCTCAGCAACAGCCTaGCTGCCTACGCGCACATCC +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGCSATA*LPTRTS
Trigger: GGATGTGCGCGTAGGCAGCCAGGCTGTTGCTGAGCA...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCCGCGAAGGGACATaGAGTTGCTCAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGPREGT*SCSATA
Trigger: GGCTGTTGCTGAGCAACTCCATGTCCCTTCGCGGGG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGGCCAGAACAGCAGGTaGCACACGTGCAGAGATCCG +
Preference number: 4 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGGQNSR*HTCRDP
Trigger: CGGATCTCTGCACGTGTGTCACCTGCTGTTCTGGCC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTCCTCTCTGGGGTCGATaGAGAGGTGAAGTGACCAAA +
Preference number: 4 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRPLWGR*RGEVTK
Trigger: TTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGG...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGTCTCTGGGATCTCCTaGACCAGGCGCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGVSGIS*TRRSGK
Trigger: CTTCCCCGAGCGCCTGGTGCAGGAGATCCCAGAGAC...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR GCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAATGTCATAGGCCAGGCTaGTCAGCTTGGGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQCHRPG*SAWEAA
Trigger: AGCGGCCTCCCAAGCTGAGCAGCCTGGCCTATGACA...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp AGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RVYFLAFPKVVCKDVGGPFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTTTTCCCAAAGTCGTGTaGAAGGACGTGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRFPKVV*KDVGGP
Trigger: GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAA...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR GCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAACATGTTGGCCAGATGTaGCTGGGAGGGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQHVGQM*LGGTVR
Trigger: CCTGACGGTCCCTCCCAGGCACATCTGGCCAACATG...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTCCGCCATTTCTCCAGTaGGCGGCTGGAGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGPPFLQ*AAGVRR
Trigger: CCTTCGGACTCCAGCCGCGCACTGGAGAAATGGCGG...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CCCATAGGAGTCAGTCCTAGTCCTCCCCCATCTAGATCTGCCCTCTACTTGAACGGTGGACTTCACGTCTaGGCCGAGGTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PIGVSPSPPPSRSALYLNGGLHV*AEVRSS
Trigger: GCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACC...GTTCAAGTAGAGGGCAGATCTAGATGGGGGAGGACTAGGACTGACTCCTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGATGGGGTGGGATCTaGCACAAGCCGCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQGWGGI*HKPPQA
Trigger: AGCTTGTGGCGGCTTGTGGCAGATCCCACCCCATCC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTACTTTGCACCATCTTTaGGGCCTCGGGTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRTLHHL*GLGCLA
Trigger: TGCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGT...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGAGTACAAAGTTGTCTaGAAAAACTCCTCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: PPATRPAWRRARQSLLSREYKVV*KNSSSS
Trigger: GGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTC...GCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTATGTCTTGGCTTTGCTaGGCCCAGTGGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPMSWLC*AQWWLL
Trigger: CAACAGCCACCACTGGGCCCAGCAAAGCCAAGACAT...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGACACAGAGCGTTGCTaGGGAGTCTGGGTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKDTERC*GVWVLD
Trigger: ATCCAAAACCCAGACTCCCCAGCAACGCTCTGTGTC...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGATGATGGAGTTCTCTaGGATAGAAGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEDDGVL*DRSLVL
Trigger: GAGGACAAGGCTTCTATCCCAGAGAACTCCATCATC...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGATTGAATGTCATCTCTaGTGGACACCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQIECHL*WTPLLQ
Trigger: CTGAAGAAGAGGTGTCCACCAGAGATGACATTCAAT...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCAACTCAGCCTGGCGTaGGGAGCTGTCCCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGQLSLA*GAVPSN
Trigger: GTTAGAGGGGACAGCTCCCCACGCCAGGCTGAGTTG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGGCAGGCCTGGATGCTaGCCCAGACTTCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGGRPGC*PRLQLS
Trigger: GCTGAGTTGAAGTCTGGGCCAGCATCCAGGCCTGCC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp GTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGGGTCCTCTCGTCATTaGAAGGTGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VYFLAFPKVVCKDVGGPSGSSRH*KVPPLE
Trigger: TTCCAGAGGAGGCACCTTCCAATGACGAGAGGACCC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCCCCACAGTGCCCTaGGTTCATACATTTCTCGCG +
Preference number: 4 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKVPTVP*VHTFLA
Trigger: CGCGAGAAATGTATGAACCCAGGGCACTGTGGGGAC...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACACATTCAAGCCTaGGCCCTGGAAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQGHIQA*ALEGGV
Trigger: CACCCCTCCTTCCAGGGCCCAGGCTTGAATGTGTCC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCAGAGGGGCCATCTTTGGATTAGGGACTTTATCCATAGGTGGGGCTTCTAGGCCGCCACAAGCTGCTTaGTGCACAAGAGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PRGAIFGLGTLSIGGASRPPQAA*CTRAQE
Trigger: CTCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGG...CCTAGAAGCCCCACCTATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp TTCGGCCTGCTGCTCACCCTCTGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCACAAATATACAGATGTaGGCAAAAATACCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: FGLLLTLCLLVISISWAPTNIQM*AKIPAR
Trigger: GCGGGCAGGTATTTTTGCCCACATCTGTATATTTGT...GGGCGCCCACGAGATGCTGATGACGAGCAGGCAGAGGGTGAGCAGCAGGCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
3UTR CAA 72 bp GGCGTGTGGGCCTCCTCCTGGGATGATGGATCCTCTTaGGCTACAAAGTACTTGACCTTCTGCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVWASSWDDGSS*ATKYLTFCRAS
Trigger: GGAAGCCCTGCAGAAGGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCCCACACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR TCA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACATCCCCGTGGTAGGGTaGGGCCCATGTCAACGGCAG +
Preference number: 4 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYIPVVG*GPCQRQ
Trigger: CTGCCGTTGACATGGGCCTCACCCTACCACGGGGAT...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTCTGTTGCTAGCTTCTTaGCTGTGGGGAGGGATGTTT +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLLLLAS*LWGGMF
Trigger: AAACATCCCTCCCCACAGTCAAGAAGCTAGCAACAG...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGCCTCCTCCTGGGATaGTGGATCCTCTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQGLLLG*WILFGY
Trigger: GTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp AGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCATCATTAACCCTGCGTaGCTAGACCAGAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RVYFLAFPKVVCKDVGGPIINPA*LDQSSA
Trigger: GGCCGAGCTCTGGTCTAGTCACGCAGGGTTAATGAT...GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTACGATCTCCCCAGCTTaGAGCTTCAGCTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRTISPA*SFSSSA
Trigger: GGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGT...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR GCA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTCGGTGTAAGCATGCGTaGTTGGGCTGGACGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRRCKHA*LGWTVD
Trigger: GTCCACCGTCCAGCCCAAGCACGCATGCTTACACCG...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp TCTAGCTCAGGCTTTAGGATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTGGGGGGAGTAGGGGTCTaGAGCCCGGACAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSGFRIREQQIQILTVLGGVGV*SPDRER
Trigger: CCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCC...CAAAACCGTCAGGATTTGAATCTGCTGCTCTCTGATCCTAAAGCCTGAGCTAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACCAGCTAGGCAGGGGGTaGGGAGGGCATGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYQLGRG*GGHVDH
Trigger: ATGGTCCACATGCCCTCCCCACCCCCTGCCTAGCTG...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACCCCCATGGAAAGCGGTaGGGAGCATGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYPHGKR*GAWALQ
Trigger: CTGCAGAGCCCATGCTCCCCACCGCTTTCCATGGGG...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GTAATGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VMGATCWPDVPGRDRQECAIPQS*MGRLPA
Trigger: AGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGC...GCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGAGTGTCCGAGATGTCTTaGCTTTGCTGGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGVSEMS*LCWAQW
Trigger: CCACTGGGCCCAGCAAAGCCAAGACATCTCGGACAC...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCTCTGACTGTCCCTGCTaGGTGTCCGAGATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGSDCPC*VSEMSW
Trigger: CCAAGACATCTCGGACACCCAGCAGGGACAGTCAGA...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGGGAGTCTGGGTTTTaGATCGCTTTCGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQGESGF*IAFGQG
Trigger: ACCCTGGCCGAAAGCGATCCAAAACCCAGACTCCCC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp TCTAGCTCAGGCTTTAGGATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTGGGCGTTCTCTGGAGCTaGGGGCCTCTCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSGFRIREQQIQILTVLGVLWS*GPLWGG
Trigger: GCCACCCCAGAGAGGCCCCCAGCTCCAGAGAACGCC...CAAAACCGTCAGGATTTGAATCTGCTGCTCTCTGATCCTAAAGCCTGAGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGAGCCGGGATCTTCTTaGAGCTGGGGGCGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGEPGSS*SWGRSL
Trigger: CAGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTC...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAGATGATGGAGTTCTCTaGGATAGAAGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSADDGVL*DRSLVL
Trigger: GAGGACAAGGCTTCTATCCCAGAGAACTCCATCATC...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTTGTAGCCTCTTCGTaGGGGTGGGGCTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AVLGRVYFLAFPKVVCKDVVASS*GWGFSR
Trigger: CCTTGAGAAGCCCCACCCCCACGAAGAGGCTACAAC...GTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGGGTCCTCTCGTCATTaGAAGGTGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRGSSRH*KVPPLE
Trigger: TTCCAGAGGAGGCACCTTCCAATGACGAGAGGACCC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTCAAAGGCTCTTTCTATaGGGGGCACCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLQRLFL*GAPPLL
Trigger: CAAAAGAGGAGGTGCCCCCCATAGAAAGAGCCTTTG...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAATGGGAGCCACATGTTaGCCAGATGTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQMGATC*PDVPGR
Trigger: CCTCCCAGGCACATCTGGCCAACATGTGGCTCCCAT...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCCTTCCAGTCCAGCATaGGTCTGGGGAAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPCPHSALGSYISRVSQSPSSPA*VWGREA
Trigger: TGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGG...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAGCCCTGGCTCAAAGCTaGAGTCCAACAATCATTAAC +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSAALAQS*SPTIIN
Trigger: GTTAATGATTGTTGGACTCCAGCTTTGAGCCAGGGC...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCGGGGACGGGATGGGGTaGGATCTGCCACAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPGDGMG*DLPQAA
Trigger: GGCGGCTTGTGGCAGATCCCACCCCATCCCGTCCCC...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCCGGGCGCCGGAAGACTaGGGGCCTGAACCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPRAPED*GPEPFP
Trigger: AGGGAAGGGTTCAGGCCCCCAGTCTTCCGGCGCCCG...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR TCA 90 bp GTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGTCAGGCGGAGTAAGTaGAAGAACCTGTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VYFLAFPKVVCKDVGGPSVRRSK*KNLSKV
Trigger: AACCTTGGACAGGTTCTTTCACTTACTCCGCCTGAC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR TCA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCCCACCTTAGCCTCCTaGGTAGCAGGAACTATAGGT +
Preference number: 4 (lower is better)
Translates to: SPCPHSALGSYISRVSQSPTLAS*VAGTIG
Trigger: ACCTATAGTTCCTGCTACTCAGGAGGCTAAGGTGGG...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTCTACTTGCAGCCATGTaGCTCCACAGGCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRLLAAM*LHRHCL
Trigger: TAAGCAGTGCCTGTGGAGTCACATGGCTGCAAGTAG...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CCACACTGGGCCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCGCGTCTGCGTGTGGATaGCGCGCGGGGTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PHWAYDCPFSKFLPVPSFASACG*RAGSGT
Trigger: AGTCCCAGACCCCGCGCGTCATCCACACGCAGACGC...GAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGGCCCAGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGGATGAAGAGGTGAAGTaGCCAAATGAAAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQDEEVK*PNERKL
Trigger: CAGCTTTCTTTCATTTGGTCACTTCACCTCTTCATC...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCTCCGTTTATTTGATCTaGGAAGTGGGGATAATGGTA +
Preference number: 4 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGSVYLI*EVGIMV
Trigger: TACCATTATCCCCACTTCGCAGATCAAATAAACGGA...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACACGGCAAGCCCCCTCTaGCTGCTCGTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYTASPL*LLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGGGGCTTGCCGT...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GAAGCAGTCAACAAGCAGGCAGGTGAGCAGACAGCAGATAAGTCCTGGGCAGATCAGGTGCTGGGGTCATaGGGACACTCAAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: EAVNKQAGEQTADKSWADQVLGS*GHSKDS
Trigger: TGAGTCCTTTGAGTGTCCCCATGACCCCAGCACCTG...ATCTGCCCAGGACTTATCTGCTGTCTGCTCACCTGCCTGCTTGTTGACTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTACTTTGCACCATCTTTaGGGCCTCGGGTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRTLHHL*GLGCLA
Trigger: TGCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGT...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGATTCCACAAAGTTGGATaGGAAGGCTCCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGFHKVG*EGSQLP
Trigger: GGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAA...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAACTTCTTGATTGGGGGTaGTGGGAGTACAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKLLDWG*WEYKVV
Trigger: GACAACTTTGTACTCCCACCACCCCCAATCAAGAAG...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTAGATACCACTTTCCGTaGGACCAGCTTCTTGATTGG +
Preference number: 4 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRRYHFP*DQLLDW
Trigger: CCAATCAAGAAGCTGGTCCCACGGAAAGTGGTATCT...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCAGAGGGGCCATCTTTGGATTAGGGACTTTATCCATAGGTGGGGCTTCTAGGCTTTGCTGGGCCCAGTaGTGGCTGTTGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRGAIFGLGTLSIGGASRLCWAQ*WLLLAS
Trigger: AGAAGCTAGCAACAGCCACCACTGGGCCCAGCAAAG...CCTAGAAGCCCCACCTATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGCTCTTCCTCCTGACTaGACACAGAGCGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRALPPD*TQSVAG
Trigger: CCCAGCAACGCTCTGTGTCCAGTCAGGAGGAAGAGC...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CCCAGAGGGGCCATCTTTGGATTAGGGACTTTATCCATAGGTGGGGCTTCTAGGGACTTTGTCAGGAGCTaGGATCTTCCCCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PRGAIFGLGTLSIGGASRDFVRS*DLPRGG
Trigger: TCCACCTCGGGGAAGATCCCAGCTCCTGACAAAGTC...CCTAGAAGCCCCACCTATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp AAGCATGCGTGCTTGGGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTATTGAATGTCATCTCTaGTGGACACCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KHACLGWTVDFTSAPRCVIECHL*WTPLLQ
Trigger: CTGAAGAAGAGGTGTCCACCAGAGATGACATTCAAT...AACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCACGCATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGTGTGGGCCTCCTCCTaGGATGATGGATCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQVWASS*DDGSSL
Trigger: CAAAGAGGATCCATCATCCCAGGAGGAGGCCCACAC...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CCA 90 bp TCTAGCTCAGGCTTTAGGATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTGGAGGCCTCTGCTCGTTaGGGGGCGCCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSSGFRIREQQIQILTVLEASAR*GAPPLQ
Trigger: CTGAAGAGGAGGCGCCCCCCAACGAGCAGAGGCCTC...CAAAACCGTCAGGATTTGAATCTGCTGCTCTCTGATCCTAAAGCCTGAGCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCGTCTGCGTCTGCGTGTaGATGACGCGCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPVCVCV*MTRGVW
Trigger: CCAGACCCCGCGCGTCATCCACACGCAGACGCAGAC...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTGTCTTGGGAGGCCGCTaGGGACCAGGGCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: DLLQGFLRREVMELNVISVLGGR*GPGLTE
Trigger: TTCAGTCAGCCCTGGTCCCCAGCGGCCTCCCAAGAC...AGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CAA 72 bp AGGCACTGCTTAACCTCGCTGAGCCTCACTTCCTTCTaGGCAAATGTGAGCCACGCTACAAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RHCLTSLSLTSF*ANVSHATNCTG
Trigger: CCCTGTGCAGTTTGTAGCGTGGCTCACATTTGCCAAGAAGGAAGTGAGGCTCAGCGAGGTTAAGCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCTGTTGCTAGCTTCTTaGCTGTGGGGAGGGATGTTT +
Preference number: 4 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGLLLAS*LWGGMF
Trigger: AAACATCCCTCCCCACAGTCAAGAAGCTAGCAACAG...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR TCA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGGCCACCATTGGGGCCTaGGTCTCGGGAGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLATIGA*VSGGEL
Trigger: AAGCTCACCTCCCGAGACTCAGGCCCCAATGGTGGC...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR GCA 90 bp AGCTGTGACCTCCCCAGCAACTGGGCACTTCACAAACACATTATCATTACCTTTGGGGAGCATGGGCTCTaGAGTCCAGTCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: SCDLPSNWALHKHIIITFGEHGL*SPVQAT
Trigger: AGTGGCCTGGACTGGACTGCAGAGCCCATGCTCCCC...AAAGGTAATGATAATGTGTTTGTGAAGTGCCCAGTTGCTGGGGAGGTCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAACTCGTCATTGGAAGGTaGCTCCTCTGGAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQLVIGR*LLWKGC
Trigger: ACAACCCTTCCAGAGGAGGCACCTTCCAATGACGAG...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR GCA 90 bp GACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTGGGCCTTTACCGGGCTaGTGTGCTCTTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DLLQGFLRREVMELNVISGPLPG*CALPLG
Trigger: GCCAAGAGGAAGAGCACAGCAGCCCGGTAAAGGCCC...AGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp ATCTTCCCCGAGGTGGAGTTCCCTGGGATAGAGGCCTTGTCCCCTAGAGTGAGGGTTTATTTGATCCTCTaGCTGCTCGTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: IFPEVEFPGIEALSPRVRVYLIL*LLVISI
Trigger: GATGCTGATGACGAGCAGGCAGAGGATCAAATAAAC...CCTCACTCTAGGGGACAAGGCCTCTATCCCAGGGAACTCCACCTCGGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR GCA 90 bp CTTGCCCGCTGGCGGTTCCCTAATGCCCTTCGAGTAGGGGTTACAGGCCTCGCCTTGTTGACTAGTGGCTaGACAGATTTATATACAGAC +
Preference number: 4 (lower is better)
Translates to: LARWRFPNALRVGVTGLALLTSG*TDLYTD
Trigger: GTCTGTATATAAATCTGTGCAGCCACTAGTCAACAA...GGCGAGGCCTGTAACCCCTACTCGAAGGGCATTAGGGAACCGCCAGCGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCCTGGTCTCAAACTCCTaGACTTCAGTGATCTGCACA +
Preference number: 4 (lower is better)
Translates to: HTFLAFPKVVCKDVGGPSLVSNS*TSVICT
Trigger: TGTGCAGATCACTGAAGTCCAGGAGTTTGAGACCAG...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAACTTCTTGATTGGGGGTaGTGGGAGTACAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKLLDWG*WEYKVV
Trigger: GACAACTTTGTACTCCCACCACCCCCAATCAAGAAG...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGACCAGCTTCTTGATTaGGGGTGGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRDQLLD*GWWEYK
Trigger: TTTGTACTCCCACCACCCCCAATCAAGAAGCTGGTC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGACTTTGTCAGGAGCTaGGATCTTCCCCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGDFVRS*DLPRGG
Trigger: TCCACCTCGGGGAAGATCCCAGCTCCTGACAAAGTC...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTGATGATGGAGTTCTCTaGGATAGAAGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPDDGVL*DRSLVL
Trigger: GAGGACAAGGCTTCTATCCCAGAGAACTCCATCATC...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAAGTCAGGGTCTCCTCTaGGATGATGGAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQSQGLL*DDGVLW
Trigger: CCAGAGAACTCCATCATCCCAGAGGAGACCCTGACT...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAATTGAATGTCATCTCTaGTGGACACCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MGWDLPQAATSCLVHKSAIECHL*WTPLLQ
Trigger: CTGAAGAAGAGGTGTCCACCAGAGATGACATTCAAT...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGTCGTGTGCAAGGACGTaGGTGGCCCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLSCART*VAPARS
Trigger: TGACCTGGCTGGGGCCACCCACGTCCTTGCACACGA...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTTTTTTGATGCAAAGTTaGTTAAACCCACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAFLMQS*LNPQML
Trigger: CAGCATCTGTGGGTTTAACCAACTTTGCATCAAAAA...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CAA 72 bp TACATCAACTCCTTCATTCTTGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAGCGCGAGCGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: YINSFILVFRVV*RDQRGERERLL
Trigger: CAAGAGACGCTCGCGCTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAACAAGAATGAAGGAGTTGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR TCA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTCCGTGCTTTCCAAGGTaGCAAATCTCTAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: PCPHSALGSYISRVSQSRPCFPR*QISSLT
Trigger: TGTGAGACTAGAGATTTGTCACCTTGGAAAGCACGG...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp GACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTGGCCTCCTCCTGGGATaGTGGATCCTCTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: DLLQGFLRREVMELNVISGLLLG*WILFGY
Trigger: GTAGCCAAAGAGGATCCATCATCCCAGGAGGAGGCC...AGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR TCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCGGGTGTTTGGCAGGATaGCCTAGCACCGGACAAGCG +
Preference number: 4 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPGCLAG*PSTGQA
Trigger: CGCTTGTCCGGTGCTAGGTCATCCTGCCAAACACCC...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CCCATAGGAGTCAGTCCTAGTCCTCCCCCATCTAGATCTGCCCTCTACTTGAACAAGTACTTGACCTTCTaGAGGGCTTCCTCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: PIGVSPSPPPSRSALYLNKYLTF*RASSEE
Trigger: CTCTTCGGAGGAAGCCCTGCAGAAGGTCAAGTACTT...GTTCAAGTAGAGGGCAGATCTAGATGGGGGAGGACTAGGACTGACTCCTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp CCCATAGGAGTCAGTCCTAGTCCTCCCCCATCTAGATCTGCCCTCTACTTGAACACACACCACATTGCATaGACAAGCCCAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PIGVSPSPPPSRSALYLNTHHIA*TSPGGK
Trigger: TTTCCCACCTGGGCTTGTGCATGCAATGTGGTGTGT...GTTCAAGTAGAGGGCAGATCTAGATGGGGGAGGACTAGGACTGACTCCTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGACACAGAGCGTTGCTaGGGAGTCTGGGTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGDTERC*GVWVLD
Trigger: ATCCAAAACCCAGACTCCCCAGCAACGCTCTGTGTC...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTAGACCCTCTCTGGAGTaGAGGGTTTGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRRPSLE*RVCPQS
Trigger: TGACTGTGGACAAACCCTCCACTCCAGAGAGGGTCT...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGGCCTCAGGCAGCGCCTTCAGCTATGTCTGCAATTTCCTCTCCCCCTTTCCTCAGAGGGGCCATCTTTaGATTAGGGACTTTATCCAT +
Preference number: 4 (lower is better)
Translates to: QASGSAFSYVCNFLSPFPQRGHL*IRDFIH
Trigger: ATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTG...AGGAAAGGGGGAGAGGAAATTGCAGACATAGCTGAAGGCGCTGCCTGAGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp CCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCCAGCAGCTGTGGACCGGCAAACGCCTaGACACACGTCGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PMIVHLANFCQYPLSSSCGPANA*THVALS
Trigger: GGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTCC...ACAGCTGCTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp TCTAGCTCAGGCTTTAGGATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTGGGACACATTCAAGCCTaGGCCCTGGAAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSSGFRIREQQIQILTVLGHIQA*ALEGGV
Trigger: CACCCCTCCTTCCAGGGCCCAGGCTTGAATGTGTCC...CAAAACCGTCAGGATTTGAATCTGCTGCTCTCTGATCCTAAAGCCTGAGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR TCA 90 bp TTGGCAGAGTGCCAGGTGCCAGAAAGGGTACTCAATGTCCCTATTATTGTTTTCAGGCAGCTTTGGGTCTaGGGGGTGGAGAATGATGGC +
Preference number: 4 (lower is better)
Translates to: LAECQVPERVLNVPIIVFRQLWV*GVENDG
Trigger: GCCATCATTCTCCACCCCTCAGACCCAAAGCTGCCT...GAAAACAATAATAGGGACATTGAGTACCCTTTCTGGCACCTGGCACTCTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTATACACAGTATTTGTTaGCTAGTGGCTGCACAGATT +
Preference number: 4 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLIHSIC*LVAAQI
Trigger: AATCTGTGCAGCCACTAGTCAACAAATACTGTGTAT...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCATATTAGCCATAAATTTCATTTCAGGAGCATAAAGGGAGCAACAGCAAGCATGACGCGCGGGGTCTaGGACTTCTGGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WHISHKFHFRSIKGATASMTRGV*DFWVPC
Trigger: GCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCAT...GCTTGCTGTTGCTCCCTTTATGCTCCTGAAATGAAATTTATGGCTAATATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp TGGCATATTAGCCATAAATTTCATTTCAGGAGCATAAAGGGAGCAACAGCAAGCGTCTGCGTCTGCGTGTaGATGACGCGCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WHISHKFHFRSIKGATASVCVCV*MTRGVW
Trigger: CCAGACCCCGCGCGTCATCCACACGCAGACGCAGAC...GCTTGCTGTTGCTCCCTTTATGCTCCTGAAATGAAATTTATGGCTAATATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp ACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCACAACAATACTCAGAAGCAGCTTTGCCTaGAAGGGGCCTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSGCTDLYTDIPAPTTILRSSFA*KGPPRR
Trigger: CCTCCTAGGAGGCCCCTTCCAGGCAAAGCTGCTTCT...GAGTATTGTTGTGGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGATTCAAATCCTGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCGGTCTGCGAGACTGCTaGCCGGGCCCTGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ADSNPDGFGKVNSISPRLGLRDC*PGPGSK
Trigger: CTTTGAGCCAGGGCCCGGCCAGCAGTCTCGCAGACC...GAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGTCAGGATTTGAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR GCA 90 bp AGCTGTGACCTCCCCAGCAACTGGGCACTTCACAAACACATTATCATTACCTTTGTCCAGGCCACTACTTaGAGCCATGTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SCDLPSNWALHKHIIITFVQATT*SHVTPQ
Trigger: CTGTGGAGTCACATGGCTGCAAGTAGTGGCCTGGAC...AAAGGTAATGATAATGTGTTTGTGAAGTGCCCAGTTGCTGGGGAGGTCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CCACACTGGGCCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCCATCGTTTCAGACGTTaGCACCACCACACCCGAGCA +
Preference number: 4 (lower is better)
Translates to: PHWAYDCPFSKFLPVPSFHRFRR*HHHTRA
Trigger: TGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATG...GAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGGCCCAGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR GCA 90 bp AGCTGTGACCTCCCCAGCAACTGGGCACTTCACAAACACATTATCATTACCTTTTGGACTTCAGTGATCTaGACACCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SCDLPSNWALHKHIIITFWTSVI*TPRPPK
Trigger: TTTGGGAGGCCGAGGTGTGCAGATCACTGAAGTCCA...AAAGGTAATGATAATGTGTTTGTGAAGTGCCCAGTTGCTGGGGAGGTCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
3UTR CAA 72 bp CTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATaGAATGTCATCTCTGGTGGACACCTCTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLQGFLRREVME*NVISGGHLFFR
Trigger: TCTGAAGAAGAGGTGTCCACCAGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CCA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGCAAAGGCTCTTTCTATaGGGGGCACCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLQRLFL*GAPPLL
Trigger: CAAAAGAGGAGGTGCCCCCCATAGAAAGAGCCTTTG...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp TGGCATATTAGCCATAAATTTCATTTCAGGAGCATAAAGGGAGCAACAGCAAGCTGGGGACAGCCACATTaGCCAAAGGTTTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: WHISHKFHFRSIKGATASWGQPH*PKVSGT
Trigger: GGTCCCTGAAACCTTTGGCCAATGTGGCTGTCCCCA...GCTTGCTGTTGCTCCCTTTATGCTCCTGAAATGAAATTTATGGCTAATATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp CCACACTGGGCCTATGATTGTCCATTTAGCAAATTTTTGCCAGTACCCTCTTTCTGCTTGGGTTTGCACTaGGTCCTGAATATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PHWAYDCPFSKFLPVPSFCLGLH*VLNMPA
Trigger: TGCTGGCATATTCAGGACCCAGTGCAAACCCAAGCA...GAAAGAGGGTACTGGCAAAAATTTGCTAAATGGACAATCATAGGCCCAGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CCA 90 bp GCAGATTCAAATCCTGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCGGAAGGTGCCTCCTCTaGAAGGGTTGTAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ADSNPDGFGKVNSISPRLGRCLL*KGCSLF
Trigger: GAAGAGGCTACAACCCTTCCAGAGGAGGCACCTTCC...GAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGTCAGGATTTGAATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTACAAATATACAGATGTaGGCAAAAATACCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DLLQGFLRREVMELNVISTNIQM*AKIPAR
Trigger: GCGGGCAGGTATTTTTGCCCACATCTGTATATTTGT...AGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CAA 72 bp GTAAAGTCAATTCAATCTCTCCAAGACTCCGTTTATTaGATCCTCTGCCTGCTCGTCATCAGCATCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VKSIQSLQDSVY*ILCLLVISISW
Trigger: CCACGAGATGCTGATGACGAGCAGGCAGAGGATCAAATAAACGGAGTCTTGGAGAGATTGAATTGACTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
3UTR CAA 72 bp GTGTTCAGAACTTTACCAAATTCATCGTTTCAGACGTaGACACCACCACACCCGAGCATCAGTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: VFRTLPNSSFQT*TPPHPSISLYT
Trigger: TGTGTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGGTAAAGTTCTGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR TCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCGGTGAAGTGACCAAATaGAAGAAAGCTGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPGEVTK*KKAAFS
Trigger: TGAGAATGCAGCTTTCTTTCATTTGGTCACTTCACC...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CCA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCGAGTACAAAGTTGTCTaGAAAAACTCCTCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPEYKVV*KNSSSS
Trigger: GGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTC...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CCA 90 bp GCAGATTCAAATCCTGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCGACCAGCTTCTTGATTaGGGGTGGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: ADSNPDGFGKVNSISPRLDQLLD*GWWEYK
Trigger: TTTGTACTCCCACCACCCCCAATCAAGAAGCTGGTC...GAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGTCAGGATTTGAATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CAA 72 bp TGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTaGTTGACTAGTGGCTGCACAGATTTATATACAGAC +
Preference number: 4 (lower is better)
Translates to: WTRLGSARHTQY*LTSGCTDLYTD
Trigger: GTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
3UTR CAA 72 bp GCCAGGTGCCAGAAAGGGTACTCAATGTCCCTATTATaGTTTTCTTGTTGTTGCTGTTGTTTTGTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ARCQKGYSMSLL*FSCCCCCFVCF
Trigger: AAAACAAACAAAACAACAGCAACAACAAGAAAACAATAATAGGGACATTGAGTACCCTTTCTGGCACCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp CACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCGGGCAAGCCTTCAGTTaGGCCACTGGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: HGDSAGPRRHAAGPRAVRGQAFS*ATGAGS
Trigger: GCTCCCGGCCCCAGTGGCCAAACTGAAGGCTTGCCC...GCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS GCA 90 bp CCAAACTCTCCGCGAAGCCAGCCCCGCGCGGGCACCCAGCGCACCTaGCGGACCACGTCCCCGGGCGCCAGACTCAGCTCGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PNSPRSQPRAGTQRT*RTTSPGARLSSSSF
Trigger: GAAGGAGGACGAGCTGAGTCTGGCGCCCGGGGACGTGGTCCGGCAGGTGCGCTGGGTGCCCGCGCGGGGCTGGCTTCGCGGAGAGTTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR CAA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCGGAGCCGGGATCTTCTaGGAGCTGGGGGCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPGAGIF*ELGAFS
Trigger: AGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTCC...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGAGCCGGGATCTTCTaGGAGCTGGGGGCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAGAGIF*ELGAFS
Trigger: AGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTCC...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGCTGGGAGGGGTCCGAGCTGGCGAGAAGGCCCGCCCGGCTCCTCCCCGGCGCATACGAACCCCCACTTaGGAAGCCACCATTGGGGCC +
Preference number: 5 (lower is better)
Translates to: QLGGVRAGEKARPAPPRRIRTPT*EATIGA
Trigger: GGCCCCAATGGTGGCTTCCAAAGTGGGGGTTCGTAT...GCGCCGGGGAGGAGCCGGGCGGGCCTTCTCGCCAGCTCGGACCCCTCCCAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGGGTCCTCTCGTCATaGGAAGGTGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAGVLSS*EGASSG
Trigger: TCCAGAGGAGGCACCTTCCAATGACGAGAGGACCCC...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp ACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACCAGGCAGGTTTAGCCTaGGGGTGGGGGACGGGATGG +
Preference number: 5 (lower is better)
Translates to: TLPGPELSAEPDGPLNVNQAGLA*GWGTGW
Trigger: CCATCCCGTCCCCCACCCCAAGGCTAAACCTGCCTG...GTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAGCTCGGGGCCCGGCAGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCTGGGTTACCAAGGCTaGGGGGCCCACTGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTLGYQG*GAHCPA
Trigger: TGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCCAG...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp GTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGGTGTCCGAGATGTCTaGGCTTTGCTGGGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VPGRDRQECGGPGPAPAQGVRDV*ALLGPV
Trigger: CACTGGGCCCAGCAAAGCCAAGACATCTCGGACACC...CTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCATACGAACCCCCACTTaGGAAGCCACCATTGGGGCC +
Preference number: 5 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPIRTPT*EATIGA
Trigger: GGCCCCAATGGTGGCTTCCAAAGTGGGGGTTCGTAT...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAGAGCGCGAGCGTCTCTaGGGAGTCTGGAGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: QAPPPATRPAWRRARQSLERERL*GVWRRL
Trigger: AAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTC...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp TGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCCGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: WEGPSGMRRPRPCPRAGPVFRVV*RDQRGE
Trigger: CTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAAC...GGGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTAGCCGCGCGCAGGCCTaGGGAACGGTAATGGGAGCC +
Preference number: 5 (lower is better)
Translates to: APPPATRPAWRRARQSLLSRAQA*GTVMGA
Trigger: GGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCT...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCGGCAAACGCAGGCAGGTTTAGCCTaGGGGTGGGGGACGGGATGG +
Preference number: 5 (lower is better)
Translates to: RERILREIWRTGQPDRQTQAGLA*GWGTGW
Trigger: CCATCCCGTCCCCCACCCCAAGGCTAAACCTGCCTG...CGTTTGCCGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS GCA 90 bp TGCCGGACCACGTCCCCGGGCGCCAGACTCAGCTCGTCCTCCTTCTaGGCGCGGTATCCGGCCAGGACGAGGACTTCCATGGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: CRTTSPGARLSSSSF*ARYPARTRTSMVSG
Trigger: CCCGGAAACCATGGAAGTCCTCGTCCTGGCCGGATACCGCGCGCAGAAGGAGGACGAGCTGAGTCTGGCGCCCGGGGACGTGGTCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS-3UTR CAA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCAGCCTCTCTGTTGTaGCTGTTAGTGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPPASLL*LLVAWG
Trigger: CCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGG...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCATGGGGACAGCCACATaGGCCAAAGGTTTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAMGTAT*AKGFRD
Trigger: GTCCCTGAAACCTTTGGCCAATGTGGCTGTCCCCAT...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp GCAAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACGTGGGACCAGCTTCTaGATTGGGGGTGGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: ARTWVAPARSGRGPFPGPRGTSF*IGGGGS
Trigger: ACTCCCACCACCCCCAATCAAGAAGCTGGTCCCACG...TGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp AAACTTTCCGCCGGCTGGTCCCTCGGTCCGTGTCCCGCCCGTGCTGCCGCGGCCTGGGGAGTCTGGGTTTaGGATCGCTTTCGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: KLSAGWSLGPCPARAAAAWGVWV*DRFRPG
Trigger: CCCTGGCCGAAAGCGATCCAAAACCCAGACTCCCCA...GGCCGCGGCAGCACGGGCGGGACACGGACCGAGGGACCAGCCGGCGGAAAGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCTCTGGGATAGAAGCCTaGTCCTCCGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPSGIEA*SSGVTI
Trigger: GATGGTGACTCCGGAGGACAAGGCTTCTATCCCAGA...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCAATGGGAGCCACATGTaGGCCAGATGTGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSNGSHM*ARCAWE
Trigger: CTCCCAGGCACATCTGGCCAACATGTGGCTCCCATT...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGAGCCGCGCGCAGGCCTaGGGAACGGTAATGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAESRAQA*GTVMGA
Trigger: GGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCT...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGTGTAAGCATGCGTGCTaGGGCTGGACGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: VPGRDRQECGGPGPAPAQCKHAC*GWTVDF
Trigger: GAAGTCCACCGTCCAGCCCAAGCACGCATGCTTACA...CTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGTCTCGGGACTGGGGGAGTAGGGGTCTGCAGCCCGGACAGGGAGAGGGTCGCCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGC +
Preference number: 5 (lower is better)
Translates to: QSRDWGSRGLQPGQGEGRHDLPS*QLQLVR
Trigger: GCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTG...GCGACCCTCTCCCTGTCCGGGCTGCAGACCCCTACTCCCCCAGTCCCGAGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp TATCCTCCATCCCGCCCCGGGACGGCGGAACCGGGCCTCAGCTGGGGACCTCACCGTGGGACCAGCTTCTaGATTGGGGGTGGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: YPPSRPGTAEPGLSWGPHRGTSF*IGGGGS
Trigger: ACTCCCACCACCCCCAATCAAGAAGCTGGTCCCACG...GTGAGGTCCCCAGCTGAGGCCCGGTTCCGCCGTCCCGGGGCGGGATGGAGGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp GCGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCGGCATGTAAGCATGCGTGCTaGGGCTGGACGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: ARTDPAGDLAHRAAGPAACKHAC*GWTVDF
Trigger: GAAGTCCACCGTCCAGCCCAAGCACGCATGCTTACA...TGCCGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGATCCGTTCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474766.1
CDS TCA 90 bp GGCCAGGCTGCTCAGCTTGGGAGGCCGCTGGGGACCAGGGCTGACTaGAGGCATGTCTGGGTTACCAAGGCTTGGGGGCCCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: GQAAQLGRPLGTRAD*RHVWVTKAWGPTVQ
Trigger: CTGGACAGTGGGCCCCCAAGCCTTGGTAACCCAGACATGCCTTCAGTCAGCCCTGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCAATGATGGCCTAGAGTaGCCCCATGGAAAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTNDGLE*PHGKRW
Trigger: CCACCGCTTTCCATGGGGCAACTCTAGGCCATCATT...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp GACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCTATGAAAAGGCAGCTTaGGGTCTGAGGGGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: DSAGPRRHAAGPRAVRRAYEKAA*GLRGGE
Trigger: TTCTCCACCCCTCAGACCCAAAGCTGCCTTTTCATA...GGCTCTGCGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGGCCAGGCTGCTCAGCTaGGGAGGCCGCTGGGGACCA +
Preference number: 5 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQARLLS*GGRWGP
Trigger: TGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCCTGGC...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTCGTGGGACCAGCTTCTaGATTGGGGGTGGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: APPPATRPAWRRARQSLLRGTSF*IGGGGS
Trigger: ACTCCCACCACCCCCAATCAAGAAGCTGGTCCCACG...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCACTGGACACAGAGCGTaGCTGGGGAGTCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTTGHRA*LGSLGF
Trigger: AAAACCCAGACTCCCCAGCAACGCTCTGTGTCCAGT...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp AAGGACGTGGGTGGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCTCTGGGATAGAAGCCTaGTCCTCCGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: KDVGGPSQVRPRSLPRPTSGIEA*SSGVTI
Trigger: GATGGTGACTCCGGAGGACAAGGCTTCTATCCCAGA...GGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCTTGGCTACAAAGTACTaGACCTTCTGCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPLATKY*TFCRAS
Trigger: GGAAGCCCTGCAGAAGGTCAAGTACTTTGTAGCCAA...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGGCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTAAATGGGAGCCACATGTaGGCCAGATGTGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QAPPPATRPAWRRARQSLNGSHM*ARCAWE
Trigger: CTCCCAGGCACATCTGGCCAACATGTGGCTCCCATT...TAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGGGAGCAGAGCTGTGCTaGGGTTTGCACTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELGAELC*GLHWVL
Trigger: CAGGACCCAGTGCAAACCCAAGCACAGCTCTGCTCC...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp CAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCTCAGTAGGTCTGCGTCTGCGCACTTTGCACCATCTTaGGGGCCTCGGGTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: QVRPRSLPRPTLSRSASAHFAPS*GPRVFG
Trigger: GCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGTG...CGCAGACGCAGACCTACTGAGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp GTGTGGATGACGCGCGGGGTCTGGGACTTCTGGGTCCCCTGCATCACCTGGACCTCTGGGGTGGCAGTCTaGTCCGGCATGGGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: VWMTRGVWDFWVPCITWTSGVAV*SGMGVL
Trigger: GAGAACCCCCATGCCGGACAAGACTGCCACCCCAGA...GGTCCAGGTGATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp GCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGAGCTGTCTGGGGAGGGGACTTaGTCAGGAGCCGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: AEPDGPLNVNVFTSAEELSGEGT*SGAGIF
Trigger: GAAGATCCCGGCTCCTGACAAAGTCCCCTCCCCAGA...CAGCTCCTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCTCAGTAGGTCTGCGTCTGCGTCTGGGGTGGGGACTTaGTCAGGAGCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: QVRPRSLPRPTLSRSASASGVGT*SGAGIF
Trigger: GAAGATCCCAGCTCCTGACAAAGTCCCCACCCCAGA...CGCAGACGCAGACCTACTGAGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp CGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCTGGGCACAGGCACGCTGGGGTTGGCTACAAAGTACTaGACCTTCTGCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: REIWRTGQPDLLGTGTLGLATKY*TFCRAS
Trigger: GGAAGCCCTGCAGAAGGTCAAGTACTTTGTAGCCAA...CCCCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CGGCCTCTACTTCGTGCTGGGCGTCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCCGCCACAAGCTGCTaGGTGCACAAGAGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: RPLLRAGRLLRPAAHPLPAATSC*VHKSAG
Trigger: TCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGC...AGGCAGAGGGTGAGCAGCAGGCCGAAGCAGACGCCCAGCACGAAGTAGAGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS TCA 90 bp CATAGGCCAGGCTGCTCAGCTTGGGAGGCCGCTGGGGACCAGGGCTaGCTGAAGGCATGTCTGGGTTACCAAGGCTTGGGGGCCCACTGT +
Preference number: 5 (lower is better)
Translates to: HRPGCSAWEAAGDQG*LKACLGYQGLGAHC
Trigger: ACAGTGGGCCCCCAAGCCTTGGTAACCCAGACATGCCTTCAGTCAGCCCTGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCCTGGCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGCCAGGCTGCTCAGCTaGGGAGGCCGCTGGGGACCA +
Preference number: 5 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRARLLS*GGRWGP
Trigger: TGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCCTGGC...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGCCCTTATCCTCTGTGGTCTaGCTGAGTACTTTTACCACG +
Preference number: 5 (lower is better)
Translates to: LGGTVRNAEAQALPPRRPLSSVV*LSTFTT
Trigger: CGTGGTAAAAGTACTCAGCAAGACCACAGAGGATAA...GGGCCTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGTCTGGGGTGGGGACTTaGTCAGGAGCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: VGQMCLGGTVRNAEAQALSGVGT*SGAGIF
Trigger: GAAGATCCCAGCTCCTGACAAAGTCCCCACCCCAGA...CAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGCGGAGGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: LSAEPDGPLNVNVFTSAEVFRVV*RDQRGE
Trigger: CTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAAC...CTCCGCCGACGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTGCGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474766.1
ENST00000480549.6
ENST00000505871.7
ENST00000672976.1
CDS-3UTR CAA 90 bp GCCCCGCCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTGAGAAGGATCTGACTTaGCTGACCTCGCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: APPPATRPAWRRARQSLLEKDLT*LTSQAG
Trigger: ACCAGCCTGCGAGGTCAGCAAAGTCAGATCCTTCTC...AAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGGCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS CCA 90 bp AGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTaGCCCCAGCCAGGTCAGGCCGCGGTCCCTTCCCAGGCCCACCCT +
Preference number: 5 (lower is better)
Translates to: SLLSRVSQSRVQGRG*PQPGQAAVPSQAHP
Trigger: AGGGTGGGCCTGGGAAGGGACCGCGGCCTGACCTGGCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGAGGGCAGCACTTTGCACCATCTTaGGGGCCTCGGGTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: GWTVDFTSAPRCVQARGQHFAPS*GPRVFG
Trigger: GCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGTG...CTGCCCTCTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGC +
Preference number: 5 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQHDLPS*QLQLVR
Trigger: GCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTG...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp GTGCTTGGGCTGGACGGTGGACTTCACGTCTGCGCCGAGGTGCGTTCAAGCGAGCGAGATGTCTTGGCTTaGCTGGGCCCAGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VLGLDGGLHVCAEVRSSERDVLA*LGPVVA
Trigger: AGCCACCACTGGGCCCAGCAAAGCCAAGACATCTCG...CTCGCTTGAACGCACCTCGGCGCAGACGTGAAGTCCACCGTCCAGCCCAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCTGGGGTGGCAGTCTaGTCCGGCATGGGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: PATRPAWRRARQSLLSRVSGVAV*SGMGVL
Trigger: GAGAACCCCCATGCCGGACAAGACTGCCACCCCAGA...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCCCTGCCCCCGCGCAGGATGATGGATCCTCTTaGGCTACAAAGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: VPGRDRQECGGPGPAPAQDDGSS*ATKYLT
Trigger: GGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATC...CTGCGCGGGGGCAGGGCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCCCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCAATGGGAGCCACATGTaGGCCAGATGTGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PPATRPAWRRARQSLLSRNGSHM*ARCAWE
Trigger: CTCCCAGGCACATCTGGCCAACATGTGGCTCCCATT...GCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTCGAGATGTCTTGGCTTaGCTGGGCCCAGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PATRPAWRRARQSLLSRVRDVLA*LGPVVA
Trigger: AGCCACCACTGGGCCCAGCAAAGCCAAGACATCTCG...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GGACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCATACACAGTATTTGTaGACTAGTGGCTGCACAGAT +
Preference number: 5 (lower is better)
Translates to: GHGDSAGPRRHAAGPRAVHTQYL*TSGCTD
Trigger: ATCTGTGCAGCCACTAGTCAACAAATACTGTGTATG...GACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTCTGGGTTACCAAGGCTaGGGGGCCCACTGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PAWRRARQSLLSRVSQSRLGYQG*GAHCPA
Trigger: TGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCCAG...ACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTCTGGGGTGGCAGTCTaGTCCGGCATGGGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RRGAVLGRVYFLAFPKVVSGVAV*SGMGVL
Trigger: GAGAACCCCCATGCCGGACAAGACTGCCACCCCAGA...CACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CCAGCGACCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCTGGGGTGGGGACTTaGTCAGGAGCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: PATRPAWRRARQSLLSRVSGVGT*SGAGIF
Trigger: GAAGATCCCAGCTCCTGACAAAGTCCCCACCCCAGA...AACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGGTCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CTTGCCCGCTGGCGGTTCCCTAATGCCCTTCGAGTAGGGGTTACAGGCCTCGCCTCTGGGATAGAAGCCTaGTCCTCCGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: LARWRFPNALRVGVTGLASGIEA*SSGVTI
Trigger: GATGGTGACTCCGGAGGACAAGGCTTCTATCCCAGA...GGCGAGGCCTGTAACCCCTACTCGAAGGGCATTAGGGAACCGCCAGCGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCAGCGAGCGCGAGCGTCTCTaGGGAGTCTGGAGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: HTFLAFPKVVCKDVGGPSERERL*GVWRRL
Trigger: AAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTC...GCTGGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000672976.1
CDS-3UTR CAA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEVFRVV*RDQRGE
Trigger: CTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAAC...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCAGATCTGCCCTCTACTaGAACCCAGTCTCGGGACTG +
Preference number: 5 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGRSALY*NPVSGL
Trigger: CAGTCCCGAGACTGGGTTCAAGTAGAGGGCAGATCT...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGCGAAGGGACATGGAGTaGCTCAGCAACAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAERRDME*LSNSLA
Trigger: AGCCAGGCTGTTGCTGAGCAACTCCATGTCCCTTCG...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS CCA 90 bp GGTTACCAAGGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAGCTGCCCGTTCTTCTTCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: GYQGLGAHCPAIPQS*MGRLPAARSSSPAT
Trigger: GGTGGCTGGGGAAGAAGAACGGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCTTGGTAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTCTGGGTTACCAAGGCTaGGGGGCCCACTGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPLGYQG*GAHCPA
Trigger: TGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCCAG...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp GCACCACCCCCACCCACCAACCCGACGATACAGCACACCTGCCCGCATTCACTTACTGGACACAGAGCGTaGCTGGGGAGTCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: APPPPTNPTIQHTCPHSLTGHRA*LGSLGF
Trigger: AAAACCCAGACTCCCCAGCAACGCTCTGTGTCCAGT...AAGTGAATGCGGGCAGGTGTGCTGTATCGTCGGGTTGGTGGGTGGGGGTGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CCGGTGGATAAAAATAGCCGCGCGCAGGCCTTGGGAACGGTAATGGGAGCCACAGGGGTCCTCTCGTCATaGGAAGGTGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: PVDKNSRAQALGTVMGATGVLSS*EGASSG
Trigger: TCCAGAGGAGGCACCTTCCAATGACGAGAGGACCCC...TGTGGCTCCCATTACCGTTCCCAAGGCCTGCGCGCGGCTATTTTTATCCACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GACACGGTGACTCGGCTGGGCCCCGACGACACGCTGCCGGGCCCCGAGCTGTCCATTTTTGATGCAAAGTaGGTTAAACCCACAGATGCT +
Preference number: 5 (lower is better)
Translates to: DTVTRLGPDDTLPGPELSIFDAK*VKPTDA
Trigger: AGCATCTGTGGGTTTAACCAACTTTGCATCAAAAAT...GGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGGGCCCAGCCGAGTCACCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS CCA 90 bp TTCCACGATCTCCCCAGCTTGCAGCTTCAGCTCGTCCGCCTGCTCTaGGCTGTAGCTGAAGTTCACTTTGCACCATCTTTGGGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: FHDLPSLQLQLVRLL*AVAEVHFAPSLGPR
Trigger: CCGAGGCCCCAAAGATGGTGCAAAGTGAACTTCAGCTACAGCCCAGAGCAGGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000496636.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAATCTGGAGTGGAGGGTTaGTCCACAGTCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKSGVEG*STVRVS
Trigger: GGAGACCCTGACTGTGGACAAACCCTCCACTCCAGA...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGTTGGCTACAAAGTACTaGACCTTCTGCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PHVGQMCLGGTVRNAEAQLATKY*TFCRAS
Trigger: GGAAGCCCTGCAGAAGGTCAAGTACTTTGTAGCCAA...CTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTGGGGTCCTCTCGTCATaGGAAGGTGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPGVLSS*EGASSG
Trigger: TCCAGAGGAGGCACCTTCCAATGACGAGAGGACCCC...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCATAGGAGTCAGTCCTAGTCCTCCCCCATCTAGATCTGCCCTCTACTTGAACGAGCGCGAGCGTCTCTaGGGAGTCTGGAGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: PIGVSPSPPPSRSALYLNERERL*GVWRRL
Trigger: AAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTC...GTTCAAGTAGAGGGCAGATCTAGATGGGGGAGGACTAGGACTGACTCCTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGCTTGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: WTVPSLPVQHGSGEEKQLVFRVV*RDQRGE
Trigger: CTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAAC...AAGCTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGCCGCCACAAGCTGCTaGGTGCACAAGAGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: PCPHSALGSYISRVSQSRAATSC*VHKSAG
Trigger: TCCTGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGC...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp GGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGTGGGGAGTCTGGGTTTaGGATCGCTTTCGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GAVLGRVYFLAFPKVVCKWGVWV*DRFRPG
Trigger: CCCTGGCCGAAAGCGATCCAAAACCCAGACTCCCCA...CTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCTCTGGGGAGGGGACTTaGTCAGGAGCCGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGSGEGT*SGAGIF
Trigger: GAAGATCCCGGCTCCTGACAAAGTCCCCTCCCCAGA...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp TCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTTCTGGGGAGGGGACTTaGTCAGGAGCCGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: SPCPHSALGSYISRVSQSSGEGT*SGAGIF
Trigger: GAAGATCCCGGCTCCTGACAAAGTCCCCTCCCCAGA...ACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp CAGTGCCCTGGGTTCATACACTGCAATGACACACACACCAGGCCTCAGGACCCTTCTGGAGTGGAGGGTTaGTCCACAGTCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QCPGFIHCNDTHTRPQDPSGVEG*STVRVS
Trigger: GGAGACCCTGACTGTGGACAAACCCTCCACTCCAGA...AGGGTCCTGAGGCCTGGTGTGTGTGTCATTGCAGTGTATGAACCCAGGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGAGCGCGAGCGTCTCTaGGGAGTCTGGAGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRERERL*GVWRRL
Trigger: AAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTC...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACCAGCCTCTCTGTTGTaGCTGTTAGTGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGPASLL*LLVAWG
Trigger: CCCCCAGGCCACTAACAGCAACAACAGAGAGGCTGG...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp AGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCCCCGCTCCAGCCTCTCTGTaGTTGCTGTTAGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RVYFLAFPKVVCKDVGGPAPASL*LLLVAW
Trigger: CCAGGCCACTAACAGCAACAACAGAGAGGCTGGAGC...GGGGCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp GGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCGCTCCAGCCTCTCTGTaGTTGCTGTTAGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRVYFLAFPKVVCKDVGGAPASL*LLLVAW
Trigger: CCAGGCCACTAACAGCAACAACAGAGAGGCTGGAGC...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGC +
Preference number: 5 (lower is better)
Translates to: RARQSLLSRVSQSRVQGRHDLPS*QLQLVR
Trigger: GCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTG...ACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp TACCGGCAAACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATTATCCTCTGTGGTCTaGCTGAGTACTTTTACCACG +
Preference number: 5 (lower is better)
Translates to: YRQTPGHTSPCPHSALGSLSSVV*LSTFTT
Trigger: CGTGGTAAAAGTACTCAGCAAGACCACAGAGGATAA...TGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTTTGCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp ACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGGCCCAGGCGGTGGGAGTACAAAGTaGTCTGGAAAAACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TCWPDVPGRDRQECGGPGGGSTK*SGKTPL
Trigger: AAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACC...GCCTGGGCCTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTGGTGGGAGTACAAAGTaGTCTGGAAAAACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: KLLGAQERRSSQAQRPHAGGSTK*SGKTPL
Trigger: AAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACC...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGAGGGGTCCTCTCGTCATaGGAAGGTGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGGVLSS*EGASSG
Trigger: TCCAGAGGAGGCACCTTCCAATGACGAGAGGACCCC...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp AAGCTGCTTGGTGCACAAGAGCGCAGGAGCTCGCAGGCACAGAGGCCCCACGCTAGGCATACACAGTATTaGTTGACTAGTGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: KLLGAQERRSSQAQRPHARHTQY*LTSGCT
Trigger: TGTGCAGCCACTAGTCAACAAATACTGTGTATGCCT...AGCGTGGGGCCTCTGTGCCTGCGAGCTCCTGCGCTCTTGTGCACCAAGCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACACTTTGCACCATCTTaGGGGCCTCGGGTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGHFAPS*GPRVFG
Trigger: GCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGTG...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp CTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGTGTCCGAGATGTCTaGGCTTTGCTGGGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: LGRVYFLAFPKVVCKDVGGVRDV*ALLGPV
Trigger: CACTGGGCCCAGCAAAGCCAAGACATCTCGGACACC...ACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp GGGTGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGAAGAGAAGCAGGATGATGGATCCTCTTaGGCTACAAAGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: GWTVPSLPVQHGSGEEKQDDGSS*ATKYLT
Trigger: GGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATC...CTGCTTCTCTTCCCCAGACCCATGCTGGACTGGAAGGGAGGGGACTGTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTTCATCGTTTCAGACGTaGACACCACCACACCCGAGC +
Preference number: 5 (lower is better)
Translates to: PCPHSALGSYISRVSQSRSSFQT*TPPHPS
Trigger: GCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGA...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp GAAGCAGTCAACAAGCAGGCAGGTGAGCAGACAGCAGATAAGTCCTGGGCAGATAGTCCAGGCCACTACTaGCAGCCATGTGACTCCACA +
Preference number: 5 (lower is better)
Translates to: EAVNKQAGEQTADKSWADSPGHY*QPCDST
Trigger: TGTGGAGTCACATGGCTGCAAGTAGTGGCCTGGACT...ATCTGCCCAGGACTTATCTGCTGTCTGCTCACCTGCCTGCTTGTTGACTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp GACCTTCTGCAGGGCTTCCTCCGAAGAGAAGTGATGGAATTGAATGTCATCTCTGGAGCCGGGATCTTCTaGGAGCTGGGGGCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: DLLQGFLRREVMELNVISGAGIF*ELGAFS
Trigger: AGAGAACGCCCCCAGCTCCAAGAAGATCCCGGCTCC...AGAGATGACATTCAATTCCATCACTTCTCTTCGGAGGAAGCCCTGCAGAAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp TGGGAGCCACATGTTGGCCAGATGTGCCTGGGAGGGACCGTCAGGAATGCGGAGAGAGAAGTGATGGAATaGAATGTCATCTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: WEPHVGQMCLGGTVRNAEREVME*NVISGG
Trigger: TCCACCAGAGATGACATTCAATTCCATCACTTCTCT...CTCCGCATTCCTGACGGTCCCTCCCAGGCACATCTGGCCAACATGTGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp TCTAGCTCAGGCTTTAGGATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTGGAGCGCGAGCGTCTCTaGGGAGTCTGGAGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: SSSGFRIREQQIQILTVLERERL*GVWRRL
Trigger: AAGCCGCCTCCAGACTCCCAAGAGACGCTCGCGCTC...CAAAACCGTCAGGATTTGAATCTGCTGCTCTCTGATCCTAAAGCCTGAGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp TGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGACGTGGGTGGCAGATCTGCCCTCTACTaGAACCCAGTCTCGGGACTG +
Preference number: 5 (lower is better)
Translates to: WVHTFLAFPKVVCKDVGGRSALY*NPVSGL
Trigger: CAGTCCCGAGACTGGGTTCAAGTAGAGGGCAGATCT...GCCACCCACGTCCTTGCACACGACTTTGGGAAACGCGAGAAATGTATGAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp CCAGACCGGCGTGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGGTGGGAGTACAAAGTaGTCTGGAAAAACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: PDRRGAVLGRVYFLAFPKGGSTK*SGKTPL
Trigger: AAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACC...TTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCACGCCGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS-3UTR CAA 90 bp ATGGGGTGGGATCTGCCACAAGCCGCCACAAGCTGCTTGGTGCACAAGAGCGCAAGAGAAGTGATGGAATaGAATGTCATCTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: MGWDLPQAATSCLVHKSAREVME*NVISGG
Trigger: TCCACCAGAGATGACATTCAATTCCATCACTTCTCT...TGCGCTCTTGTGCACCAAGCAGCTTGTGGCGGCTTGTGGCAGATCCCACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCAGAGGGGCCATCTTTGGATTAGGGACTTTATCCATAGGTGGGGCTTCTAGGTTGGCTACAAAGTACTaGACCTTCTGCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PRGAIFGLGTLSIGGASRLATKY*TFCRAS
Trigger: GGAAGCCCTGCAGAAGGTCAAGTACTTTGTAGCCAA...CCTAGAAGCCCCACCTATGGATAAAGTCCCTAATCCAAAGATGGCCCCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCTTATCCTCTGTGGTCTaGGGAGGCCGCTGGGGACCA +
Preference number: 5 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPLSSVV*GGRWGP
Trigger: TGGTCCCCAGCGGCCTCCCAAGACCACAGAGGATAA...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp AACGCCTGGACACACGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACACTGCATTTTTGATGCAAAGTaGGTTAAACCCACAGATGCT +
Preference number: 5 (lower is better)
Translates to: NAWTHVALSPQCPGFIHCIFDAK*VKPTDA
Trigger: AGCATCTGTGGGTTTAACCAACTTTGCATCAAAAAT...GCAGTGTATGAACCCAGGGCACTGTGGGGACAGGGCGACGTGTGTCCAGGCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS CCA 90 bp AGGTTGAGCATCCTTAATTGGGGGTGGTGGGAGTACAAAGTTGTCTaGAAAAACTCCTCTTCGTCCTTGACACTCTCCTTCCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: RLSILNWGWWEYKVV*KNSSSSLTLSFPPA
Trigger: GGCTGGTGGGAAGGAGAGTGTCAAGGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACCACCCCCAATTAAGGATGCTCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496636.1
CDS-3UTR CAA 90 bp CGTCGCCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAACCATTTAGCAAATTTTaGCCAGTACCCTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: RRPVPTVPWVHTFLAFPKPFSKF*PVPSFQ
Trigger: CTGGAAAGAGGGTACTGGCAAAAATTTGCTAAATGG...TTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGGCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp CCAAATTCATCGTTTCAGACGTTGACACCACCACACCCGAGCATCAGTCTGTACAGCCTCACTTCCTTCTaGGCAAATGTGAGCCACGCT +
Preference number: 5 (lower is better)
Translates to: PNSSFQTLTPPHPSISLYSLTSF*ANVSHA
Trigger: AGCGTGGCTCACATTTGCCAAGAAGGAAGTGAGGCT...GTACAGACTGATGCTCGGGTGTGGTGGTGTCAACGTCTGAAACGATGAATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp CAGTATTTGTTGACTAGTGGCTGCACAGATTTATATACAGACATACCCGCCCCCTCTGGAGTGGAGGGTTaGTCCACAGTCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QYLLTSGCTDLYTDIPAPSGVEG*STVRVS
Trigger: GGAGACCCTGACTGTGGACAAACCCTCCACTCCAGA...GGGGGCGGGTATGTCTGTATATAAATCTGTGCAGCCACTAGTCAACAAATACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp GTAAGTGAAAGAACCTGTCCAAGGTTTAGCCCTTGGCCCGCACGCAGGCAGAGCCATACACAGTATTTGTaGACTAGTGGCTGCACAGAT +
Preference number: 5 (lower is better)
Translates to: VSERTCPRFSPWPARRQSHTQYL*TSGCTD
Trigger: ATCTGTGCAGCCACTAGTCAACAAATACTGTGTATG...GCTCTGCCTGCGTGCGGGCCAAGGGCTAAACCTTGGACAGGTTCTTTCACTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS-3UTR CAA 90 bp CTTAGCAGTACTCTCCGTGCTTTCCAAGGTGACAAATCTCTAGTCTCACAGGCAGAGCTGTGCTTGGGTTaGCACTGGGTCCTGAATATG +
Preference number: 5 (lower is better)
Translates to: LSSTLRAFQGDKSLVSQAELCLG*HWVLNM
Trigger: CATATTCAGGACCCAGTGCAAACCCAAGCACAGCTC...TGCCTGTGAGACTAGAGATTTGTCACCTTGGAAAGCACGGAGAGTACTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672976.1
CDS-3UTR CAA 90 bp CGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAGGAGATGATGGATCCTCTTaGGCTACAAAGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: RRARQSLLSRVSQSRVQGDDGSS*ATKYLT
Trigger: GGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATC...TCCTTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCATAGGAGTCAGTCCTAGTCCTCCCCCATCTAGATCTGCCCTCTACTTGAACGATGATGGATCCTCTTaGGCTACAAAGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: PIGVSPSPPPSRSALYLNDDGSS*ATKYLT
Trigger: GGTCAAGTACTTTGTAGCCAAAGAGGATCCATCATC...GTTCAAGTAGAGGGCAGATCTAGATGGGGGAGGACTAGGACTGACTCCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp TGGCGCCGTGCTAGGCAGAGTTTACTTTCTCGCGTTTCCCAAAGTCGTGTGCAAAGAGAAGTGATGGAATaGAATGTCATCTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: WRRARQSLLSRVSQSRVQREVME*NVISGG
Trigger: TCCACCAGAGATGACATTCAATTCCATCACTTCTCT...TTGCACACGACTTTGGGAAACGCGAGAAAGTAAACTCTGCCTAGCACGGCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000474766.1
ENST00000505871.7
CDS-3UTR CAA 90 bp CCCTGTCCCCACAGTGCCCTGGGTTCATACATTTCTCGCGTTTCCCAAAGTCGTCAAATCCTGACGGTTTaGGTAAAGTCAATTCAATCT +
Preference number: 5 (lower is better)
Translates to: PCPHSALGSYISRVSQSRQILTV*VKSIQS
Trigger: AGATTGAATTGACTTTACCAAAACCGTCAGGATTTG...ACGACTTTGGGAAACGCGAGAAATGTATGAACCCAGGGCACTGTGGGGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS-3UTR CAA 90 bp GCAGATTCAAATCCTGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTCGTTTTCCGTGTAGTTTaGCGGGACCAGCGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: ADSNPDGFGKVNSISPRLVFRVV*RDQRGE
Trigger: CTCCCCTCGCTGGTCCCGCAAAACTACACGGAAAAC...GAGTCTTGGAGAGATTGAATTGACTTTACCAAAACCGTCAGGATTTGAATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS-3UTR CAA 90 bp AACCCACAGATGCTGTGGACTAGACTAGGAAGTGCTAGGCATACACAGTATTTGAGGCATACACAGTATTaGTTGACTAGTGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: NPQMLWTRLGSARHTQYLRHTQY*LTSGCT
Trigger: TGTGCAGCCACTAGTCAACAAATACTGTGTATGCCT...CAAATACTGTGTATGCCTAGCACTTCCTAGTCTAGTCCACAGCATCTGTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000505871.7
CDS GCA 72 bp ACGTCCCCGGGCGCCAGACTCAGCTCGTCCTCCTTCTaGGCGCGGTATCCGGCCAGGACGAGGACTTCCATG +
Preference number: 6 (lower is better)
Translates to: TSPGARLSSSSF*ARYPARTRTSM
Trigger: CATGGAAGTCCTCGTCCTGGCCGGATACCGCGCGCAGAAGGAGGACGAGCTGAGTCTGGCGCCCGGGGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS TCA 72 bp GGCTGCTCAGCTTGGGAGGCCGCTGGGGACCAGGGCTaGCTGAAGGCATGTCTGGGTTACCAAGGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GCSAWEAAGDQG*LKACLGYQGLG
Trigger: CCCCAAGCCTTGGTAACCCAGACATGCCTTCAGTCAGCCCTGGTCCCCAGCGGCCTCCCAAGCTGAGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS TCA 72 bp GTTTGGCAGGATGACCTAGCACCGGACAAGCGCGGCTaGGCTCCAGTCGGACGCCCCAGTCAGAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VWQDDLAPDKRG*APVGRPSQRSW
Trigger: CCAGCTCCTCTGACTGGGGCGTCCGACTGGAGCTCAGCCGCGCTTGTCCGGTGCTAGGTCATCCTGCCAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505871.7
CDS TCA 72 bp CCTCTGTGGTCTTGGGAGGCCGCTGGGGACCAGGGCTaGCTGAAGGCATGTCTGGGTTACCAAGGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PLWSWEAAGDQG*LKACLGYQGLG
Trigger: CCCCAAGCCTTGGTAACCCAGACATGCCTTCAGTCAGCCCTGGTCCCCAGCGGCCTCCCAAGACCACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS CAA 90 bp GTCCGCCTGCTCTGGGCTGTAGCTGAAGTTCACTTTGCACCATCTTaGGGGCCTCGGGTGTTTGGCAGGATGACCTCGGCGGCGCGCACA +
Preference number: 6 (lower is better)
Translates to: VRLLWAVAEVHFAPS*GPRVFGRMTSAART
Trigger: TGTGCGCGCCGCCGAGGTCATCCTGCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGTGAACTTCAGCTACAGCCCAGAGCAGGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS TCA 72 bp CCTCTGTGGTCTTGGGAGGCCGCTGGGGACCAGGGCTaGCTGAAGGCATGTCTGGGTTACCAAGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: PLWSWEAAGDQG*LKACLGYQGLL
Trigger: AAGGAGGCCTTGGTAACCCAGACATGCCTTCAGTCAGCCCTGGTCCCCAGCGGCCTCCCAAGACCACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496636.1
CDS GCA 72 bp TGGGGGTTCTCTTCACAGAGGGGGCCTTTACCGGGCTaGTGTGCTCTTCCTCCTGAGTCTCGGGAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WGFSSQRGPLPG*CALPPESREVS
Trigger: GCTCACCTCCCGAGACTCAGGAGGAAGAGCACAGCAGCCCGGTAAAGGCCCCCTCTGTGAAGAGAACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508854.2
CDS GCA 72 bp TGGGGGTTCTCTTCACAGAGGGGGCCTTTACCGGGCTaGTGTGCTCTTCCTCTTGGCTTTGCTGGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: WGFSSQRGPLPG*CALPLGFAGPS
Trigger: ACTGGGCCCAGCAAAGCCAAGAGGAAGAGCACAGCAGCCCGGTAAAGGCCCCCTCTGTGAAGAGAACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480549.6
CDS CAA 90 bp GGGTTACCAAGGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTaGGATGGGAAGGCTCCCAGCTGCCCGTTCTTCTTCCCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: GLPRLGGPLSSNSTK*DGKAPSCPFFFPSH
Trigger: GTGGCTGGGGAAGAAGAACGGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCTTGGTAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS GCA 72 bp TGGGGGTTCTCTTCACAGAGGGGGCCTTTACCGGGCTaGTGTGCTCTTCCTCCTGACTGGACACAGAGCGTT +
Preference number: 6 (lower is better)
Translates to: WGFSSQRGPLPG*CALPPDWTQSV
Trigger: AACGCTCTGTGTCCAGTCAGGAGGAAGAGCACAGCAGCCCGGTAAAGGCCCCCTCTGTGAAGAGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS CCA 72 bp TGGGGGCCCACTGTCCAGCAATTCCACAAAGTTGGATaGGAAGGCTCCCAGCTGCCCGTTCTTCTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: WGPTVQQFHKVG*EGSQLPVLLPQ
Trigger: CTGGGGAAGAAGAACGGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CCA 72 bp GGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAGCTGCCCGTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GLGAHCPAIPQS*MGRLPAARSSS
Trigger: GGAAGAAGAACGGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CAA 72 bp GCTGCTGTGCTCTTCCTCCTGACTGGACACAGAGCGTaGCTGGGGAGTCTGGGTTTTGGATCGCTTTCGGCC +
Preference number: 6 (lower is better)
Translates to: AAVLFLLTGHRA*LGSLGFGSLSA
Trigger: GGCCGAAAGCGATCCAAAACCCAGACTCCCCAGCAACGCTCTGTGTCCAGTCAGGAGGAAGAGCACAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS CAA 72 bp CTCTGGGCTGTAGCTGAAGTTCACTTTGCACCATCTTaGGGGCCTCGGGTGTTTGGCAGGATGACCTCGGCG +
Preference number: 6 (lower is better)
Translates to: LWAVAEVHFAPS*GPRVFGRMTSA
Trigger: CGCCGAGGTCATCCTGCCAAACACCCGAGGCCCCAAAGATGGTGCAAAGTGAACTTCAGCTACAGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453908.8
CDS CAA 72 bp AGGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTaGGATGGGAAGGCTCCCAGCTGCCCGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RLGGPLSSNSTK*DGKAPSCPFFF
Trigger: GAAGAAGAACGGGCAGCTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CCA 72 bp CTCCCCAGCTTGCAGCTTCAGCTCGTCCGCCTGCTCTaGGCTGTAGCTGAAGTTCACTTTGCACCATCTTTG +
Preference number: 6 (lower is better)
Translates to: LPSLQLQLVRLL*AVAEVHFAPSL
Trigger: CAAAGATGGTGCAAAGTGAACTTCAGCTACAGCCCAGAGCAGGCGGACGAGCTGAAGCTGCAAGCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000496636.1
ENST00000505871.7
CDS CAA 72 bp CAAGGCCTCCTTTATCATTTCCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGCCTGCTCTGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: QGLLYHFHDLPS*QLQLVRLLWAV
Trigger: TACAGCCCAGAGCAGGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTGGAAATGATAAAGGAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496636.1
CDS CAA 90 bp CCAGCCGTCCTCAATCTCCTTTATCATTTCCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGCCTGCTCTGGGCTGTAGCTGAAGTT +
Preference number: 6 (lower is better)
Translates to: PAVLNLLYHFHDLPS*QLQLVRLLWAVAEV
Trigger: AACTTCAGCTACAGCCCAGAGCAGGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTGGAAATGATAAAGGAGATTGAGGACGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CAA 90 bp CTGGGTTACCAAGGCCTCCTTTATCATTTCCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGCCTGCTCTGGGCTGTAGCTGAAGTT +
Preference number: 6 (lower is better)
Translates to: LGYQGLLYHFHDLPS*QLQLVRLLWAVAEV
Trigger: AACTTCAGCTACAGCCCAGAGCAGGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTGGAAATGATAAAGGAGGCCTTGGTAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496636.1
CDS CAA 72 bp CTCAATCTCCTTTATCATTTCCACGATCTCCCCAGCTaGCAGCTTCAGCTCGTCCGCCTGCTCTGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: LNLLYHFHDLPS*QLQLVRLLWAV
Trigger: TACAGCCCAGAGCAGGCGGACGAGCTGAAGCTGCAAGCTGGGGAGATCGTGGAAATGATAAAGGAGATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CAA 72 bp GCTTTGCTGGGCCCAGTGGTGGCTGTTGCTAGCTTCTaGACTGTGGGGAGGGATGTTTTGGGCATCAACTTT +
Preference number: 6 (lower is better)
Translates to: ALLGPVVAVASF*TVGRDVLGINF
Trigger: AAAGTTGATGCCCAAAACATCCCTCCCCACAGTCAAGAAGCTAGCAACAGCCACCACTGGGCCCAGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CAA 90 bp GGGTGGTGGGAGTACAAAGTTGTCTGGAAAAACTCCTCTTCGTCCTaGACACTCTCCTTCCCACCAGCCCTTATCCTCTGTGGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: GWWEYKVVWKNSSSS*TLSFPPALILCGLG
Trigger: CCCAAGACCACAGAGGATAAGGGCTGGTGGGAAGGAGAGTGTCAAGGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480549.6
ENST00000496636.1
CDS TCA 72 bp CTTTGCTGGGCCCAGTGGTGGCTGTTGCTAGCTTCTTaGCTGTGGGGAGGGATGTTTTGGGCATCAACTTTT +
Preference number: 6 (lower is better)
Translates to: LCWAQWWLLLAS*LWGGMFWASTF
Trigger: AAAAGTTGATGCCCAAAACATCCCTCCCCACAGTCAAGAAGCTAGCAACAGCCACCACTGGGCCCAGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CAA 90 bp GGGTGGTGGGAGTACAAAGTTGTCTGGAAAAACTCCTCTTCGTCCTaGACACTCTCCTTCCCACCAGCCCTTATCCTCTGTGGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: GWWEYKVVWKNSSSS*TLSFPPALILCGLA
Trigger: AGCAAGACCACAGAGGATAAGGGCTGGTGGGAAGGAGAGTGTCAAGGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453908.8
ENST00000505871.7
CDS CCA 72 bp CTTCTTGATTGGGGGTGGTGGGAGTACAAAGTTGTCTaGAAAAACTCCTCTTCGTCCTTGACACTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLDWGWWEYKVV*KNSSSSLTLSF
Trigger: GAAGGAGAGTGTCAAGGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACCACCCCCAATCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000453908.8
ENST00000480549.6
ENST00000505871.7
CDS CCA 72 bp ATCCTTAATTGGGGGTGGTGGGAGTACAAAGTTGTCTaGAAAAACTCCTCTTCGTCCTTGACACTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ILNWGWWEYKVV*KNSSSSLTLSF
Trigger: GAAGGAGAGTGTCAAGGACGAAGAGGAGTTTTTCCAGACAACTTTGTACTCCCACCACCCCCAATTAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496636.1