RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3BP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000131370

Ensembl transcript IDs: ENST00000366391.6, ENST00000383791.8, ENST00000408919.7, ENST00000412806.1, ENST00000417936.5, ENST00000426925.5, ENST00000450625.1, ENST00000459627.1, ENST00000465894.6

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCAGGCGGAGTCGAACTGCCGCTTGTCATCCTCCAGCAGCCGCTaGTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCACCTCT +
Preference number: 1 (lower is better)
Translates to: CQAESNCRLSSSSSR*SAREMVSLAARSTS
Trigger: AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp CCTTGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTaGCTTTCTGAGCTTCCAGCTGAGCCTGCCTCGCCACCCTCCGTG +
Preference number: 1 (lower is better)
Translates to: PWRHGAPLWPSGSPA*LSELPAEPASPPSV
Trigger: CACGGAGGGTGGCGAGGCAGGCTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp TGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTaGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTGG +
Preference number: 1 (lower is better)
Translates to: CHPPAAAARPGRWSP*RHGAPLWPSGSPAW
Trigger: CCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp ACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATaGTCTCCTTGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGT +
Preference number: 1 (lower is better)
Translates to: TAACHPPAAAARPGR*SPWRHGAPLWPSGS
Trigger: ACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp GCTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCACCTCTGTaGCCCTCTGGAAGTCCTGCGTGGCTTTCTGAGCTTCCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: ARPGRWSPWRHGAPL*PSGSPAWLSELPAE
Trigger: CTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 90 bp CTTCTCCAGCTGTCGCATGCGGCCCATGGCGGCATTGTACCTGGCTaGCGTCTCCTTATGCACCAGCTCGCTCCTGGTCTTGGTCTGCTC +
Preference number: 1 (lower is better)
Translates to: LLQLSHAAHGGIVPG*RLLMHQLAPGLGLL
Trigger: GAGCAGACCAAGACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 90 bp AGAGCTGCTTCATCCGGTTCTCCAAGGCCTGGCCCTCAGGGGAGGTaGTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGC +
Preference number: 1 (lower is better)
Translates to: RAASSGSPRPGPQGR*CFGSYCCHHCHCYC
Trigger: GCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGGCCAGGCCTTGGAGAACCGGATGAAGCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CCA 90 bp GGGCTGGGCAGATCCAGGCTGCCAGGCCTCACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGGCTTGTTGGTCCTGAACTAAAGCTG +
Preference number: 1 (lower is better)
Translates to: GLGRSRLPGLTTAGN*SGISDGLVGPELKL
Trigger: CAGCTTTAGTTCAGGACCAACAAGCCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CCA 90 bp GTTTCTTCTCCAGCTGTCGCATGCGGCCCATGGCGGCATTGTACCTaGCTGCCGTCTCCTTATGCACCAGCTCGCTCCTGGTCTTGGTCT +
Preference number: 1 (lower is better)
Translates to: VSSPAVACGPWRHCT*LPSPYAPARSWSWS
Trigger: AGACCAAGACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGAAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp CCAGCTGAGCCTGCCTCGCCACCCTCCGTGCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCA +
Preference number: 1 (lower is better)
Translates to: PAEPASPPSVPPSRA*SLPQLCQFSSPVHP
Trigger: TGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGGCTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 90 bp CCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTaGATTCACTTCGAGGGCCCAACACTGGGAACATCATCCCAAACT +
Preference number: 1 (lower is better)
Translates to: PCLLVLLHIQGRRPR*IHFEGPTLGTSSQT
Trigger: AGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR GCA 90 bp TCAGCAATAATTCCATCTCTTCCCTTTGAGCACTGTAGGGAGAGCTaGTTCATCCGGTTCTCCAAGGCCTGGCCCTCAGGGGAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: SAIIPSLPFEHCRES*FIRFSKAWPSGEVL
Trigger: CAGCACCTCCCCTGAGGGCCAGGCCTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTGCTCAAAGGGAAGAGATGGAATTATTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR TCA 90 bp AACCGCAGGGAACTGGTCAGGCATCTCAGACGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGACTGGGTTTCCGAGTCATCTTCAGA +
Preference number: 1 (lower is better)
Translates to: NRRELVRHLRRACWS*TKAGHGLGFRVIFR
Trigger: TCTGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR TCA 90 bp TGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCTaGGGCCCCGGTTGTTGTTGGCTTTGTCACTTGTTTTATTCTCTG +
Preference number: 1 (lower is better)
Translates to: CCFGSYCCHHCHCYC*GPGCCWLCHLFYSL
Trigger: CAGAGAATAAAACAAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR GCA 90 bp CCACCCTCCGTGCCTCCCAGTAGGGCTTGGAGTCTTCCACAGCTTTaGCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTGCTTCAA +
Preference number: 1 (lower is better)
Translates to: PPSVPPSRAWSLPQL*QFSSPVHPVSPLLQ
Trigger: TTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp ATCTCAGACGGGCTTGTTGGTCCTGAACTAAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCAGACACAAAGTTGCTACAGCTGTCA +
Preference number: 1 (lower is better)
Translates to: ISDGLVGPELKLDTD*VSESSSDTKLLQLS
Trigger: TGACAGCTGTAGCAACTTTGTGTCTGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCGTCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR GCA 90 bp CACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTGCAG +
Preference number: 1 (lower is better)
Translates to: HSFANFLHQFIQFHR*FNQNRAELLTSILQ
Trigger: CTGCAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 90 bp CAACCATTCTTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTaGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCA +
Preference number: 1 (lower is better)
Translates to: QPFFTCTSLRINPLG*QDKAYAVEPSPPQP
Trigger: TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAAGAATGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR GCA 90 bp ACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTaGTCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATC +
Preference number: 1 (lower is better)
Translates to: TKAVNLVTVYPQQEL*SEKPAQELLPRRTI
Trigger: GATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR GCA 90 bp ACTGGTGACCACAGCACTCCATGCTCTTCCTTATGGAAAAAGGGTTaGCTAGAAGATTTAGGCAATACTGGGAGTTCTTATTTGAAGTCA +
Preference number: 1 (lower is better)
Translates to: TGDHSTPCSSLWKKG*LEDLGNTGSSYLKS
Trigger: TGACTTCAAATAAGAACTCCCAGTATTGCCTAAATCTTCTAGGCAACCCTTTTTCCATAAGGAAGAGCATGGAGTGCTGTGGTCACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
3UTR-3UTR GCA 90 bp GCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCCTCGCCACCCTCCGTaGCTCCCAGTAGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: AACHPPAAAARPGRWSPWPRHPP*LPVGLG
Trigger: TCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGG...CCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR TCA 90 bp CTTCTCCAGCTGTCGCATGCGGCCCATGGCGGCATTGTACCTGGCTGCCGTCTCACAGAGCGGAACTTCTaGCGAGCATCCTGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LLQLSHAAHGGIVPGCRLTERNF*RASCSQ
Trigger: CTGGCTGCAGGATGCTCGTCAGAAGTTCCGCTCTGT...GAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR GCA 90 bp TCGCATGCGGCCCATGGCGGCATTGTACCTGGCTGCCGTCTCCTTATGCACCAGCAGGCGGAGTCGAACTaGCGCTTGTCATCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SHAAHGGIVPGCRLLMHQQAESN*RLSSSS
Trigger: GCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTG...CTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR CCA 90 bp AGGGGAGGAGGCCCCGCTGCATTCACTTCGAGGGCCCAACACTGGGAACATCATACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGG +
Preference number: 2 (lower is better)
Translates to: RGGGPAAFTSRAQHWEHHTTAGN*SGISDG
Trigger: CCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGT...ATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR TCA 90 bp GGAGGTGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCTGAGCGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGA +
Preference number: 2 (lower is better)
Translates to: GGAALALTAATTATATAERACWS*TKAGHG
Trigger: TCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCG...CTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR GCA 90 bp TCGAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCG +
Preference number: 2 (lower is better)
Translates to: SNCRLSSSSSRCSAREMVIQFHR*FNQNRA
Trigger: CGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGAT...GACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTATGGGCAGATCCAGGCTaGCAGGCCTCACAACCGCAG +
Preference number: 2 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLWADPG*QASQPQ
Trigger: CTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCA...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR CCA 90 bp CTGCATTCACTTCGAGGGCCCAACACTGGGAACATCATCCCAAACTCTGACAGGAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: LHSLRGPNTGNIIPNSDRKLDTD*VSESSS
Trigger: TGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTT...CCTGTCAGAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR CCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTGGGGAGGTGCTGCTTTaGCTCTTACTGCTGCCACCA +
Preference number: 2 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCGEVLL*LLLLPP
Trigger: TGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCC...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR TCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGCATCATCCCAAACTCTaGCAGGGACACAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKHHPKL*QGHRAG
Trigger: CCCAGCCCTGTGTCCCTGTCAGAGTTTGGGATGATG...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR GCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCATTATTGCTTCCACAATaGCGTTATACGGAATGTTCC +
Preference number: 2 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPLLLPQ*RYTECS
Trigger: GGAACATTCCGTATAACGGCATTGTGGAAGCAATAA...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR-3UTR GCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACAGAGAAGCAAGCTGTTaGCCCCACTTTGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYREASC*PHFGLA
Trigger: AGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCT...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR CCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCATATCGTGGGATAAAGTaGAGAGGACATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPYRGIK*RGHLHF
Trigger: AAAATGGAGATGTCCTCTCCACTTTATCCCACGATA...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR CAA 90 bp CCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTGCA +
Preference number: 2 (lower is better)
Translates to: PQLCQFSSPVHPVSP*LQPEQSGTSDEHPA
Trigger: TGCAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR GCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATCCTCAGGGGAGGTGCTaGTTTGGCTCTTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYPQGRC*FGSYCC
Trigger: GCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGG...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR TCA 90 bp GCTACTGCTGAGGCCCCGGTTGTTGTTGGCTTTGTCACTTGTTTTATTCTCTGCTCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: ATAEAPVVVGFVTCFILCSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...GCAGAGAATAAAACAAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR TCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAAGCCCTCAAGGTCACTaGAACTTCATTAGAGCAGTT +
Preference number: 2 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPSPQGH*NFIRAV
Trigger: AACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCT...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR TCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACACAAGAACTCTGCTCTaGAAAACCAGCCCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYTRTLL*KTSPRA
Trigger: AGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGT...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR TCA 90 bp CAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTGCTTCAACCACCGAGGAAACACAGTTaGGGCTTAAGAAGGGATCTG +
Preference number: 2 (lower is better)
Translates to: QLCQFSSPVHPVSPLLQPPRKHS*GLRRDL
Trigger: CAGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGG...TGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR TCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTAGCCCTCAAGGTCACTaGAACTTCATTAGAGCAGTT +
Preference number: 2 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCSPQGH*NFIRAV
Trigger: AACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCT...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCAGAGAAGCAAGCTGTTaGCCCCACTTTGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPREASC*PHFGLA
Trigger: AGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR GCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATACTTGTTTTATTCTCTaGCCCTTCTGCCCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYTCFIL*PFCPVS
Trigger: GGAGACAGGGCAGAAGGGGCAGAGAATAAAACAAGT...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR CCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTATAAATCCCCTTGGCTaGCAGGATAAGGCTTATGCT +
Preference number: 2 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGINPLG*QDKAYA
Trigger: AGCATAAGCCTTATCCTGCCAGCCAAGGGGATTTAT...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR-3UTR CCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACTATCGTGGGATAAAGTaGAGAGGACATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYYRGIK*RGHLHF
Trigger: AAAATGGAGATGTCCTCTCCACTTTATCCCACGATA...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR TCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAACAAGAACTCTGCTCTaGAAAACCAGCCCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPTRTLL*KTSPRA
Trigger: AGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGT...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR GCA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCAGCCTTTGCCAACACATaGCTGCCTACTCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSAFANT*LPTPFP
Trigger: AGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGC...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR-3UTR GCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTCTTCAGACACAAAGTTaGTACAGCTGTCATCTTCAA +
Preference number: 2 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGLQTQS*YSCHLQ
Trigger: TTGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAG...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR TCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCATCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR TCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTTCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR TCA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCAACAAGAACTCTGCTCTaGAAAACCAGCCCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSTRTLL*KTSPRA
Trigger: AGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGT...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR-3UTR GCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGATAGGAACTAGTTATTaGTTCCACAATGCCGTTATA +
Preference number: 2 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKIGTSY*FHNAVI
Trigger: TATAACGGCATTGTGGAAGCAATAACTAGTTCCTAT...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR GCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTATAGGAACTAGTTATTaGTTCCACAATGCCGTTATA +
Preference number: 2 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGIGTSY*FHNAVI
Trigger: TATAACGGCATTGTGGAAGCAATAACTAGTTCCTAT...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR GCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTTTATTGCTTCCACAATaGCGTTATACGGAATGTTCC +
Preference number: 2 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTLLLPQ*RYTECS
Trigger: GGAACATTCCGTATAACGGCATTGTGGAAGCAATAA...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCTTATTGCTTCCACAATaGCGTTATACGGAATGTTCC +
Preference number: 2 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPLLLPQ*RYTECS
Trigger: GGAACATTCCGTATAACGGCATTGTGGAAGCAATAA...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR CCA 72 bp TGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATaGTCTCCTTGGCGGCACGGAGCACCTCTGTGGCCC +
Preference number: 3 (lower is better)
Translates to: CHPPAAAARPGR*SPWRHGAPLWP
Trigger: GGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 72 bp GAGTCGAACTGCCGCTTGTCATCCTCCAGCAGCCGCTaGTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGG +
Preference number: 3 (lower is better)
Translates to: ESNCRLSSSSSR*SAREMVSLAAR
Trigger: CCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTCGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 72 bp CCAGCTGTCGCATGCGGCCCATGGCGGCATTGTACCTaGCTGCCGTCTCCTTATGCACCAGCTCGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PAVACGPWRHCT*LPSPYAPARSW
Trigger: CCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 72 bp TCCGGTTCTCCAAGGCCTGGCCCTCAGGGGAGGTGCTaGTTTGGCTCTTACTGCTGCCACCACTGCCACTGC +
Preference number: 3 (lower is better)
Translates to: SGSPRPGPQGRC*FGSYCCHHCHC
Trigger: GCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGGCCAGGCCTTGGAGAACCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR GCA 72 bp CCCATGGCGGCATTGTACCTGGCTGCCGTCTCCTTATaGACCAGCTCGCTCCTGGTCTTGGTCTGCTCCGCC +
Preference number: 3 (lower is better)
Translates to: PMAALYLAAVSL*TSSLLVLVCSA
Trigger: GGCGGAGCAGACCAAGACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 72 bp CACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTaGCTTTCTGAGCTTCCAGCTGAGCCTGCCTCGCCA +
Preference number: 3 (lower is better)
Translates to: HGAPLWPSGSPA*LSELPAEPASP
Trigger: TGGCGAGGCAGGCTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 72 bp CTGTCGCATGCGGCCCATGGCGGCATTGTACCTGGCTaGCGTCTCCTTATGCACCAGCTCGCTCCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: LSHAAHGGIVPG*RLLMHQLAPGL
Trigger: AAGACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 72 bp GGGAGATGGTCTCCTTGGCGGCACGGAGCACCTCTGTaGCCCTCTGGAAGTCCTGCGTGGCTTTCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: GRWSPWRHGAPL*PSGSPAWLSEL
Trigger: AAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 72 bp AGATCCAGGCTGCCAGGCCTCACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGGCTTGTTGGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: RSRLPGLTTAGN*SGISDGLVGPE
Trigger: TTCAGGACCAACAAGCCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGTGAGGCCTGGCAGCCTGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR CAA 90 bp CTTCTCCAGCTGTCGCATGCGGCCCATGGCGGCATTGTACCTGGCTGCCGTCTCACCGAGGAAACACAGTaGAGGCTTAAGAAGGGATCT +
Preference number: 3 (lower is better)
Translates to: LLQLSHAAHGGIVPGCRLTEETQ*RLKKGS
Trigger: AGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGGT...GAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 72 bp CCTGCCTCGCCACCCTCCGTGCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCA +
Preference number: 3 (lower is better)
Translates to: PASPPSVPPSRA*SLPQLCQFSSP
Trigger: TGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 72 bp CTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTaGATTCACTTCGAGGGCCCAACACTGGGAACATCA +
Preference number: 3 (lower is better)
Translates to: LVLLHIQGRRPR*IHFEGPTLGTS
Trigger: TGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR TCA 72 bp GAACTGGTCAGGCATCTCAGACGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGACTGGGTTTCCGAGTC +
Preference number: 3 (lower is better)
Translates to: ELVRHLRRACWS*TKAGHGLGFRV
Trigger: GACTCGGAAACCCAGTCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCGTCTGAGATGCCTGACCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR TCA 72 bp GGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCTaGGGCCCCGGTTGTTGTTGGCTTTGTCACTTGTTT +
Preference number: 3 (lower is better)
Translates to: GSYCCHHCHCYC*GPGCCWLCHLF
Trigger: AAACAAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CCA 72 bp GAGAAAGAGAAGCAAGCTGTTGCCCCCACTTTGGCCTaGCTTCCCAGCCATCTTCCCAGCTCTGGTTCTTTC +
Preference number: 3 (lower is better)
Translates to: EKEKQAVAPTLA*LPSHLPSSGSF
Trigger: GAAAGAACCAGAGCTGGGAAGATGGCTGGGAAGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR TCA 72 bp TTCACCGTTGCTTCAACCAGAACAGAGCGGAACTTCTaGCGAGCATCCTGCAGCCAGGGGAAACCGAGGAAA +
Preference number: 3 (lower is better)
Translates to: FTVASTRTERNF*RASCSQGKPRK
Trigger: TTTCCTCGGTTTCCCCTGGCTGCAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR-3UTR CAA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACAAGAGAAGCAAGCTGTaGCCCCCACTTTGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYKRSKL*PPLWPG
Trigger: GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTT...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR-3UTR CAA 90 bp CTCAGGGGAGGTGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTCGGTTGTTGTTGGCTTaGTCACTTGTTTTATTCTCT +
Preference number: 3 (lower is better)
Translates to: LRGGAALALTAATTATATRLLLA*SLVLFS
Trigger: AGAGAATAAAACAAGTGACAAAGCCAACAACAACCG...AGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR GCA 72 bp GTGCCTCCCAGTAGGGCTTGGAGTCTTCCACAGCTTTaGCAATTTTCTTCACCAGTTCATCCAGTTTCACCG +
Preference number: 3 (lower is better)
Translates to: VPPSRAWSLPQL*QFSSPVHPVSP
Trigger: CGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CCA 72 bp GGGCTTGTTGGTCCTGAACTAAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCAGACACAAAGTTGCTA +
Preference number: 3 (lower is better)
Translates to: GLVGPELKLDTD*VSESSSDTKLL
Trigger: TAGCAACTTTGTGTCTGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR CAA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTCTGAGGCCCCGGTTGTaGTTGGCTTTGTCACTTGTT +
Preference number: 3 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCLRPRL*LALSLV
Trigger: AACAAGTGACAAAGCCAACAACAACCGGGGCCTCAG...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR GCA 72 bp GCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCGGAACTTCTGACGAGC +
Preference number: 3 (lower is better)
Translates to: ANFLHQFIQFHR*FNQNRAELLTS
Trigger: GCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR GCA 72 bp GCACATCGGCCAGGGCCCAGGATGAATCAGCCAATCTaGACCATTTTTATGTCAGCAATAATTCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: AHRPGPRMNQPI*TIFMSAIIPSL
Trigger: AAGAGATGGAATTATTGCTGACATAAAAATGGTGCAGATTGGCTGATTCATCCTGGGCCCTGGCCGATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR-3UTR CAA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAAAGAGAAGCAAGCTGTaGCCCCCACTTTGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIKRSKL*PPLWPG
Trigger: GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTT...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
3UTR TCA 72 bp ATTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTaGTATGCACATCGGCCAGGGCCCAGGATGAATCAG +
Preference number: 3 (lower is better)
Translates to: IGTMFSSSMYKC*YAHRPGPRMNQ
Trigger: CTGATTCATCCTGGGCCCTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CCA 72 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTaGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: FTCTSLRINPLG*QDKAYAVEPSP
Trigger: GGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
3UTR-3UTR CAA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATTCTTCAGACACAAAGTaGCTACAGCTGTCATCTTCA +
Preference number: 3 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYSSDTK*LQLSSS
Trigger: TGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGA...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CCA 72 bp ATGGAAAAAGGGTTGCCTAGAAGATTTAGGCAATACTaGGAGTTCTTATTTGAAGTCACAGAAAGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: MEKGLPRRFRQY*EFLFEVTERRN
Trigger: GTTTCTCCTTTCTGTGACTTCAAATAAGAACTCCCAGTATTGCCTAAATCTTCTAGGCAACCCTTTTTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
3UTR-3UTR CAA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCATGTTGGCTTTGTCACTaGTTTTATTCTCTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSCWLCH*FYSLPL
Trigger: AAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACA...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CCA 72 bp TTTCTTTCTTTTTCATTTAGATATCGTGGGATAAAGTaGAGAGGACATCTCCATTTTCCCATACAAACTGAG +
Preference number: 3 (lower is better)
Translates to: FLSFSFRYRGIK*RGHLHFPIQTE
Trigger: CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGAAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCCCTCGCCACCCTCCGTaGCTCCCAGTAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSSSRCSAREMVSLAARSPRHPP*LPVGLG
Trigger: TCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGG...GCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp GCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGGCGGCTCCGCTTCAGTaGCGCGTCCATGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AACHPPAAAARPGRWSPWAAPLQ*RVHAGS
Trigger: GCTGCCTGCATGGACGCGGCACTGAAGCGGAGCCGC...CCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CCA 90 bp TCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCGCACCAGCTCGCTCCTaGTCTTGGTCTGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSSSRCSAREMVSLAARSAPARS*SWSAPP
Trigger: AGGCGGAGCAGACCAAGACCAGGAGCGAGCTGGTGC...GCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CAA 72 bp TCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTaGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSRCSAREMVS*AARSTSVALWK
Trigger: CTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp TCGCATGCGGCCCATGGCGGCATTGTACCTGGCTGCCGTCTCCTTATGCACCAGTCAGTGCCGCGTCCATaGAGGCAGCCGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: SHAAHGGIVPGCRLLMHQSVPRP*RQPARA
Trigger: CGCGCGTGCCGGCTGCCTGCATGGACGCGGCACTGA...CTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp AGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCACCTCTGCTGCCGTCTCCTTATaGACCAGCTCGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSRCSAREMVSLAARSTSAAVSL*TSSLLV
Trigger: GACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGC...AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CCA 90 bp CCCTTCTGCCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTTGCCACAGGCTGGGCTaGAGCCGCCTCGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PFCPVSSFYFTFRGGGPACHRLG*SRLATA
Trigger: GGCTGTGGCGAGGCGGCTCCAGCCCAGCCTGTGGCA...AGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR CCA 90 bp CTCAGGGGAGGTGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCGGCTGCCACAGGCTaGGCTGGAGCCGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LRGGAALALTAATTATATAAATG*AGAASP
Trigger: TGGCGAGGCGGCTCCAGCCCAGCCTGTGGCAGCCGC...AGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR CCA 90 bp GAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCGTCGCATGCGGCCCATaGCGGCATTGTACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ELPLVILQQPLLGQGDGLVACGP*RHCTWL
Trigger: CAGCCAGGTACAATGCCGCCATGGGCCGCATGCGAC...GAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR TCA 90 bp CTTCTCCAGCTGTCGCATGCGGCCCATGGCGGCATTGTACCTGGCTGCCGTCTCTCTGCTCCGCCTCCATaGCCCTCTGAGTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: LLQLSHAAHGGIVPGCRLSAPPP*PSEWRD
Trigger: ATCACGCCACTCAGAGGGTCATGGAGGCGGAGCAGA...GAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp AGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCACCTCTGGCATTGTACCTGGCTaGCGTCTCCTTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SSRCSAREMVSLAARSTSGIVPG*RLLMHQ
Trigger: CTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCC...AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp GAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCTCTCCAGCTGTCGCATaGGGCCCATGGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: ELPLVILQQPLLGQGDGLSPAVA*GPWRHC
Trigger: ACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGA...GAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp GGAGGTGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCTGAGGCGGCTCCGCTTCAGTaGCGCGTCCATGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGAALALTAATTATATAEAAPLQ*RVHAGS
Trigger: GCTGCCTGCATGGACGCGGCACTGAAGCGGAGCCGC...CTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR GCA 90 bp CTGCTGCCACCACTGCCACTGCTACTGCTGAGGCCCCGGTTGTTGTTGGCTTTGGGGAGGAGGCCCCGCTaGATTCACTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLPPLPLLLLRPRLLLALGRRPR*IHFEGP
Trigger: TGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCC...CAAAGCCAACAACAACCGGGGCCTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR TCA 90 bp GAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCACAGAGCGGAACTTCTaGCGAGCATCCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ELPLVILQQPLLGQGDGLTERNF*RASCSQ
Trigger: CTGGCTGCAGGATGCTCGTCAGAAGTTCCGCTCTGT...GAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCAGCGGCTCCGCTTCAGTaGCGCGTCCATGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPAAPLQ*RVHAGS
Trigger: GCTGCCTGCATGGACGCGGCACTGAAGCGGAGCCGC...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp GCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AACHPPAAAARPGRWSPWPPSRA*SLPQLC
Trigger: GCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGG...CCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACCTCGCCACCCTCCGTaGCTCCCAGTAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPPRHPP*LPVGLG
Trigger: TCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGG...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CCA 90 bp CCGTTGCTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTGCAGCCAGGGCTCGGCCAGGGAGATaGTCTCCTTGGCGGCACGGA +
Preference number: 4 (lower is better)
Translates to: PLLQPEQSGTSDEHPAARARPGR*SPWRHG
Trigger: TCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGC...CCTGGCTGCAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CCA 90 bp TCTCCTGCCAGGCGGAGTCGAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTTGGCGGCATTGTACCTaGCTGCCGTCTCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: SPARRSRTAACHPPAAAAWRHCT*LPSPYA
Trigger: TGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCA...AGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTGGCAGGAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CCA 90 bp CTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACAAGAGGCCCCATGGCACTaGAGCGCCGCCGCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LGWQDKAYAVEPSPPQPQEAPWH*SAAARG
Trigger: TCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTC...TTGTGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp CTGCTGCCACCACTGCCACTGCTACTGCTGAGGCCCCGGTTGTTGTTGGCTTTGGATCCTCCACAGATGTaGTGGATCCGGGGATCCACC +
Preference number: 4 (lower is better)
Translates to: LLPPLPLLLLRPRLLLALDPPQM*WIRGST
Trigger: GGTGGATCCCCGGATCCAGCACATCTGTGGAGGATC...CAAAGCCAACAACAACCGGGGCCTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR CCA 90 bp CCCTTCTGCCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTCCTCCACAGATGTGCTaGATCCGGGGATCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PFCPVSSFYFTFRGGGPAPPQMC*IRGSTS
Trigger: AGAGGTGGATCCCCGGATCCAGCACATCTGTGGAGG...AGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR TCA 90 bp TCCTTGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTGGCTTTCCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: SLAARSTSVALWKSCVAFQSPVC*YHPWTD
Trigger: ATCAGTCCACGGATGATATCAACAGACGGGAGACTG...GAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR TCA 90 bp GAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCCGAGGAAACACAGTTaGGGCTTAAGAAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: ELPLVILQQPLLGQGDGLPRKHS*GLRRDL
Trigger: CAGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGG...GAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCGCGGCTGCCACAGGCTaGGCTGGAGCCGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCAAATG*AGAASP
Trigger: TGGCGAGGCGGCTCCAGCCCAGCCTGTGGCAGCCGC...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp TCCTTGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTGGCTTTCATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: SLAARSTSVALWKSCVAFIQFHR*FNQNRA
Trigger: CGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGAT...GAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp GGAGGTGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCTGAGCATCAGGCTCAGGTTTaGTCCCTGGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGAALALTAATTATATAEHQAQV*SLADPP
Trigger: TGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATG...CTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR GCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACCTCAGGGGAGGTGCTaGTTTGGCTCTTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPPQGRC*FGSYCC
Trigger: GCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGG...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp CCCTTCTGCCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTGCCTTTGCCAACACATaGCTGCCTACTCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PFCPVSSFYFTFRGGGPAAFANT*LPTPFP
Trigger: AGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGC...AGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR CCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAGAGGCCCCATGGCACTaGAGCGCCGCCGCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPEAPWH*SAAARG
Trigger: TCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTC...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCTGCCACAGGCTGGGCTaGAGCCGCCTCGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCCHRLG*SRLATA
Trigger: GGCTGTGGCGAGGCGGCTCCAGCCCAGCCTGTGGCA...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp CCCTTCTGCCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTCTCAGGTTTGCTCCCTaGCAGATCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: PFCPVSSFYFTFRGGGPALRFAP*QILHRC
Trigger: ACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAG...AGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR TCA 90 bp CTGCATTCACTTCGAGGGCCCAACACTGGGAACATCATCCCAAACTCTGACAGGGGCCAGGGCCCAGGATaGATCAGCCAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LHSLRGPNTGNIIPNSDRGQGPG*ISQSAP
Trigger: TGGTGCAGATTGGCTGATTCATCCTGGGCCCTGGCC...CCTGTCAGAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR GCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTGACGCAGCTCGCCGATaGGGATACCTCCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCDAARR*GYLRPR
Trigger: CCGCGGCCGGAGGTATCCGCATCGGCGAGCTGCGTC...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCATGCTTTGGCTCTTACTaGTGCCACCACTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPCFGSY*CHHCHC
Trigger: GCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCA...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp CACCGTTGCTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTGCAGCCAACCTCTGTGGCCCTCTaGAAGTCCTGCGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HRCFNQNRAELLTSILQPTSVAL*KSCVAF
Trigger: GAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGT...TGGCTGCAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CCA 90 bp TTTCACCGTTGCTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTGCAGGGGAGATGGTCTCCTTaGCGGCACGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: FHRCFNQNRAELLTSILQGRWSP*RHGAPL
Trigger: CAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCC...CTGCAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR TCA 90 bp GAGGAGGCCCCGCTGCATTCACTTCGAGGGCCCAACACTGGGAACATCATCCCAACAAGAACTCTGCTCTaGAAAACCAGCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: EEAPLHSLRGPNTGNIIPTRTLL*KTSPRA
Trigger: AGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGT...TGGGATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTATCAGTGCCGCGTCCATaGAGGCAGCCGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLSVPRP*RQPARA
Trigger: CGCGCGTGCCGGCTGCCTGCATGGACGCGGCACTGA...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACCTCGCCACCCTCCGTaGCTCCCAGTAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPPRHPP*LPVGLG
Trigger: TCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGG...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCCTTCTGCCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTACTTGTTTTATTCTCTaGCCCTTCTGCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PFCPVSSFYFTFRGGGPATCFIL*PFCPVS
Trigger: GGAGACAGGGCAGAAGGGGCAGAGAATAAAACAAGT...AGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR CCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTAATCCCCGAGGCCCCATaGCACTGGAGCGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLIPEAP*HWSAAA
Trigger: AGCGGCGGCGCTCCAGTGCCATGGGGCCTCGGGGAT...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp CTGCTTTGGCTCTTACTGCTGCCACCACTGCCACTGCTACTGCTGAGGCCCCGGATAAATCCCCTTGGCTaGCAGGATAAGGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: LLWLLLLPPLPLLLLRPRINPLG*QDKAYA
Trigger: AGCATAAGCCTTATCCTGCCAGCCAAGGGGATTTAT...CCGGGGCCTCAGCAGTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR GCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCCCTCGCCACCCTCCGTaGCTCCCAGTAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELPRHPP*LPVGLG
Trigger: TCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGG...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCATGGGCAGATCCAGGCTaGCAGGCCTCACAACCGCAG +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPWADPG*QASQPQ
Trigger: CTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCA...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCTGGGCAGATCCAGGCTaGCAGGCCTCACAACCGCAG +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCWADPG*QASQPQ
Trigger: CTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCA...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACGGGAGGAGGCCCCGCTaGATTCACTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYGRRPR*IHFEGP
Trigger: TGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCC...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAGGGAGATGGTCTCCTTaGCGGCACGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPGRWSP*RHGAPL
Trigger: CAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCC...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCGGGAGATGGTCTCCTTaGCGGCACGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCGRWSP*RHGAPL
Trigger: CAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCC...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAGCACCAGCTCGCTCCTaGTCTTGGTCTGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPAPARS*SWSAPP
Trigger: AGGCGGAGCAGACCAAGACCAGGAGCGAGCTGGTGC...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGATCCCCGAGGCCCCATaGCACTGGAGCGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQIPEAP*HWSAAA
Trigger: AGCGGCGGCGCTCCAGTGCCATGGGGCCTCGGGGAT...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp ACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTGCTTCAACCCGGCAGGATTTCGGCTaGCTCCTCCGAGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TALPIFFTSSSSFTVASTRQDFG*LLRAAP
Trigger: CGGAGCCGCTCGGAGGAGCCAGCCGAAATCCTGCCG...GGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
3UTR CAA 72 bp CTGCCACCACTGCCACTGCTACTGCTGAGGCCCCGGTaGTTGTTGGCTTTGTCACTTGTTTTATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPPLPLLLLRPR*LLALSLVLFSA
Trigger: GGCAGAGAATAAAACAAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAGTAGCAGTGGCAGTGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR TCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACATCTGCTCCGCCTCCATaGCCCTCTGAGTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTSAPPP*PSEWRD
Trigger: ATCACGCCACTCAGAGGGTCATGGAGGCGGAGCAGA...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACACAGGCGGAGTCGAACTaGCGCTTGTCATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTQAESN*RLSSSS
Trigger: GCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTG...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCGCTGCCGTCTCCTTATaGACCAGCTCGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCAAVSL*TSSLLV
Trigger: GACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGC...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACCACAGATGTGCTGCTaGCCTCAGCACCAACACCGC +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPPQMCC*PQHQHR
Trigger: GCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGG...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTTCAGTGCCGCGTCCATaGAGGCAGCCGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFSVPRP*RQPARA
Trigger: CGCGCGTGCCGGCTGCCTGCATGGACGCGGCACTGA...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGGGCAGATCCAGGCTaGCAGGCCTCACAACCGCAG +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELWADPG*QASQPQ
Trigger: CTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGGGGAGGAGGCCCCGCTaGATTCACTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKGRRPR*IHFEGP
Trigger: TGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCC...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCACGGAGCACCTCTGTaGCCCTCTGGAAGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYHGAPL*PSGSPA
Trigger: CGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTG...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGGCTCGGCCAGGGAGATaGTCTCCTTGGCGGCACGGA +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKARPGR*SPWRHG
Trigger: TCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGC...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTAGCTCGGCCAGGGAGATaGTCTCCTTGGCGGCACGGA +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLARPGR*SPWRHG
Trigger: TCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGC...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTGAGGCCCCATGGCACTaGAGCGCCGCCGCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFEAPWH*SAAARG
Trigger: TCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTC...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGCGGCAGGATTTCGGCTaGCTCCTCCGAGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTERQDFG*LLRAAP
Trigger: CGGAGCCGCTCGGAGGAGCCAGCCGAAATCCTGCCG...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATCGGCAGGATTTCGGCTaGCTCCTCCGAGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYRQDFG*LLRAAP
Trigger: CGGAGCCGCTCGGAGGAGCCAGCCGAAATCCTGCCG...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp CTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACAACTCAGGTTTGCTCCCTaGCAGATCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: LGWQDKAYAVEPSPPQPQLRFAP*QILHRC
Trigger: ACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAG...TTGTGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR TCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCACAGAGCGGAACTTCTaGCGAGCATCCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCTERNF*RASCSQ
Trigger: CTGGCTGCAGGATGCTCGTCAGAAGTTCCGCTCTGT...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS-3UTR GCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCCAGGCGGAGTCGAACTaGCGCTTGTCATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELQAESN*RLSSSS
Trigger: GCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTG...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TGGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGCAGGCGGAGTCGAACTaGCGCTTGTCATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WSLPQLCQFSSPVHPVSPQAESN*RLSSSS
Trigger: GCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTG...CGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR GCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTTCTCCAGCTGTCGCATaGGGCCCATGGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCSPAVA*GPWRHC
Trigger: ACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGA...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGTCTCCAGCTGTCGCATaGGGCCCATGGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLSPAVA*GPWRHC
Trigger: ACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGA...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCCACAGATGTGCTGCTaGCCTCAGCACCAACACCGC +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLPQMCC*PQHQHR
Trigger: GCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGG...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACACCTCCACAGATGTGCTaGTGCCCTCAGCACCAACAC +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTPPQMC*CPQHQH
Trigger: GTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGG...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGGAGGAGGCCCCGCTaGATTCACTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEGRRPR*IHFEGP
Trigger: TGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCC...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACGGCCCTCAGGGGAGGTaGTGCTTTGGCTCTTACTGC +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYGPQGR*CFGSYC
Trigger: GCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGGCC...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAAGGGAGATGGTCTCCTTaGCGGCACGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQGRWSP*RHGAPL
Trigger: CAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCC...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGGCACCAGCTCGCTCCTaGTCTTGGTCTGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKAPARS*SWSAPP
Trigger: AGGCGGAGCAGACCAAGACCAGGAGCGAGCTGGTGC...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAGAGCGCCGCCGCTCGTaGATCTCATCTGAGATCATC +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPERRRS*ISSEII
Trigger: GATGATCTCAGATGAGATCCACGAGCGGCGGCGCTC...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATCCCCGAGGCCCCATaGCACTGGAGCGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPIPEAP*HWSAAA
Trigger: AGCGGCGGCGCTCCAGTGCCATGGGGCCTCGGGGAT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTTTAGN*SGISDG
Trigger: CCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGT...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCTTAGN*SGISDG
Trigger: CCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGT...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCCCCTCTGGCACCACATaGGCTGTCAGCTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELPSGTT*AVSWLC
Trigger: ACAGAGCCAGCTGACAGCCCATGTGGTGCCAGAGGG...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS-3UTR TCA 90 bp GGACTGGGTTTCCGAGTCATCTTCAGACACAAAGTTGCTACAGCTGTCATCTTCCGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGA +
Preference number: 4 (lower is better)
Translates to: GLGFRVIFRHKVATAVIFRACWS*TKAGHG
Trigger: TCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCG...GAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGATGACTCGGAAACCCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR TCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGGCCAGGGCCCAGGATaGATCAGCCAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGGQGPG*ISQSAP
Trigger: TGGTGCAGATTGGCTGATTCATCCTGGGCCCTGGCC...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAAGGCCAGGGCCCAGGATaGATCAGCCAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQGQGPG*ISQSAP
Trigger: TGGTGCAGATTGGCTGATTCATCCTGGGCCCTGGCC...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACAGGCGGAGTCGAACTaGCGCTTGTCATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLQAESN*RLSSSS
Trigger: GCTGGAGGATGACAAGCGGCAGTTCGACTCCGCCTG...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGGCTGCCGTCTCCTTATaGACCAGCTCGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKAAVSL*TSSLLV
Trigger: GACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGC...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACACCTCAGGGGAGGTGCTaGTTTGGCTCTTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTPQGRC*FGSYCC
Trigger: GCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGG...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp GAGGAGGCCCCGCTGCATTCACTTCGAGGGCCCAACACTGGGAACATCATCCCAATGAATCAGCCAATCTaGACCATTTTTATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EEAPLHSLRGPNTGNIIPMNQPI*TIFMSA
Trigger: TGCTGACATAAAAATGGTGCAGATTGGCTGATTCAT...TGGGATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR GCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAAGAGAAGCAAGCTGTTaGCCCCACTTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTREASC*PHFGLA
Trigger: AGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCT...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACACCTCTGTGGCCCTCTaGAAGTCCTGCGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYTSVAL*KSCVAF
Trigger: GAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGT...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCACCTCTGTGGCCCTCTaGAAGTCCTGCGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELTSVAL*KSCVAF
Trigger: GAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGT...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGGTCGCATGCGGCCCATaGCGGCATTGTACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQVACGP*RHCTWL
Trigger: CAGCCAGGTACAATGCCGCCATGGGCCGCATGCGAC...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACGAGCGCCGCCGCTCGTaGATCTCATCTGAGATCATC +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYERRRS*ISSEII
Trigger: GATGATCTCAGATGAGATCCACGAGCGGCGGCGCTC...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCPPSRA*SLPQLC
Trigger: GCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGG...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGTCTGCTCCGCCTCCATaGCCCTCTGAGTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQSAPPP*PSEWRD
Trigger: ATCACGCCACTCAGAGGGTCATGGAGGCGGAGCAGA...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAACATCATCCCAAACTCTaGCAGGGACACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQHHPKL*QGHRAG
Trigger: CCCAGCCCTGTGTCCCTGTCAGAGTTTGGGATGATG...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATGGCCAGGGCCCAGGATaGATCAGCCAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYGQGPG*ISQSAP
Trigger: TGGTGCAGATTGGCTGATTCATCCTGGGCCCTGGCC...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR TCA 90 bp CTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACAATCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGWQDKAYAVEPSPPQPQSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...TTGTGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR TCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACTGGGAGTTCTTATTTaGAGTCACAGAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPLGVLI*SHRKEK
Trigger: TTTCTCCTTTCTGTGACTTCAAATAAGAACTCCCAG...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR TCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGCAGGGCACGGCTGCCTaGCTCCTTCTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEQGTAA*LLLIIH
Trigger: GTGGATGATGAGAAGGAGTCAGGCAGCCGTGCCCTG...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS-3UTR GCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGGCTGCCGTCTCCTTATaGACCAGCTCGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQAAVSL*TSSLLV
Trigger: GACCAGGAGCGAGCTGGTGCATAAGGAGACGGCAGC...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAACCTCCACAGATGTGCTaGTGCCCTCAGCACCAACAC +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQPPQMC*CPQHQH
Trigger: GTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGG...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGATCCTCCACAGATGTaGTGCTGCCCTCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTDPPQM*CCPQHQ
Trigger: TTGGTGCTGAGGGCAGCAGCACATCTGTGGAGGATC...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCCCTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACTTCAGACACAAAGTTaGTACAGCTGTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: PLGWQDKAYAVEPSPPQPLQTQS*YSCHLQ
Trigger: TTGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAG...TGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACATTTGGCTCTTACTGCTaGCACCACTGCCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTFGSYC*HHCHCY
Trigger: GTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAA...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGTGCTTTGGCTCTTACTaGTGCCACCACTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLCFGSY*CHHCHC
Trigger: GCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCA...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACTGCTTTGGCTCTTACTaGTGCCACCACTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYCFGSY*CHHCHC
Trigger: GCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCA...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGGGCCCTCAGGGGAGGTaGTGCTTTGGCTCTTACTGC +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQGPQGR*CFGSYC
Trigger: GCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGGCC...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGAGAGAAGCAAGCTGTTaGCCCCACTTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLREASC*PHFGLA
Trigger: AGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCT...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAACTTCTGAAAGGTGGCTaGTGTACCACGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQLLKGG*CTTGPA
Trigger: TGCTGGGCCCGTGGTACAGCAGCCACCTTTCAGAAG...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR CCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTACCTCTGTGGCCCTCTaGAAGTCCTGCGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGTSVAL*KSCVAF
Trigger: GAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGT...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCGCTCGGCCAGGGAGATaGTCTCCTTGGCGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPARPGR*SPWRHG
Trigger: TCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGC...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGGCGGCATTGTACCTaGCTGCCGTCTCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELWRHCT*LPSPYA
Trigger: TGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLPPSRA*SLPQLC
Trigger: GCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGG...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCCTCAGGTTTGCTCCCTaGCAGATCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCLRFAP*QILHRC
Trigger: ACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAG...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAACAGAGCGGAACTTCTaGCGAGCATCCTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPTERNF*RASSSS
Trigger: TGAACTTGAGGATGCTCGTCAGAAGTTCCGCTCTGT...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000426925.5
CDS-3UTR TCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTCGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGA +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGRACWS*TKAGHG
Trigger: TCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCG...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGCGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGA +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKRACWS*TKAGHG
Trigger: TCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCG...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACACCGAGGAAACACAGTTaGGGCTTAAGAAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTPRKHS*GLRRDL
Trigger: CAGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGG...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAAGGCATTGTACCTGGCTaGCGTCTCCTTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQGIVPG*RLLMHQ
Trigger: CTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCC...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGCATCAGGCTCAGGTTTaGTCCCTGGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKHQAQV*SLADPP
Trigger: TGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATG...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCTGGGCAGATCCAGGCTaGCAGGCCTCACAACCGCAG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPWADPG*QASQPQ
Trigger: CTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCA...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTGGCCCTCAGGGGAGGTaGTGCTTTGGCTCTTACTGC +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFGPQGR*CFGSYC
Trigger: GCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGGCC...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACACACTGTAGGGAGAGCTaGTTCATCCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTHCRES*FIRFSK
Trigger: CTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTG...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCCACTGTAGGGAGAGCTaGTTCATCCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELHCRES*FIRFSK
Trigger: CTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTG...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTAAGAGAAGCAAGCTGTTaGCCCCACTTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLREASC*PHFGLA
Trigger: AGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCT...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGAGAGAAGCAAGCTGTTaGCCCCACTTTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKREASC*PHFGLA
Trigger: AGCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCT...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCGCACCAGCTCGCTCCTaGTCTTGGTCTGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPAPARS*SWSAPP
Trigger: AGGCGGAGCAGACCAAGACCAGGAGCGAGCTGGTGC...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCGTCGCATGCGGCCCATaGCGGCATTGTACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPVACGP*RHCTWL
Trigger: CAGCCAGGTACAATGCCGCCATGGGCCGCATGCGAC...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTETTAGN*SGISDG
Trigger: CCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGT...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTCGAGGGCCCAACACTaGGAACATCATCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELSRAQH*EHHPKL
Trigger: GAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGTCGAGGGCCCAACACTaGGAACATCATCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLSRAQH*EHHPKL
Trigger: GAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGA...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATGGGGAGGTGCTGCTTTaGCTCTTACTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYGEVLL*LLLLPP
Trigger: TGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCC...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGGGAGGTGCTGCTTTaGCTCTTACTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEGEVLL*LLLLPP
Trigger: TGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCC...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACACAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTQSPVC*YHPWTD
Trigger: ATCAGTCCACGGATGATATCAACAGACGGGAGACTG...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAACAGAGCGGAACTTCTaGCGAGCATCCTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTTERNF*RASSSS
Trigger: TGAACTTGAGGATGCTCGTCAGAAGTTCCGCTCTGT...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000426925.5
CDS-3UTR TCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGCGGGCTTGTTGGTCCTaGACTAAAGCTGGACACGGA +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQRACWS*TKAGHG
Trigger: TCCGTGTCCAGCTTTAGTTCAGGACCAACAAGCCCG...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTCATCATCCCAAACTCTaGCAGGGACACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFHHPKL*QGHRAG
Trigger: CCCAGCCCTGTGTCCCTGTCAGAGTTTGGGATGATG...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCATCTGGGGATGAGAACTaGCTGACAGCAACACTTAAG +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPSGDEN*LTATLK
Trigger: CTTAAGTGTTGCTGTCAGTCAGTTCTCATCCCCAGA...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR TCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGTTCTCCAGTTCTCCCTaGATAGCCAGGAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKFSSSP*IARSME
Trigger: CTCCATGCTCCTGGCTATTCAGGGAGAACTGGAGAA...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR GCA 90 bp TGCCTAGAAGATTTAGGCAATACTGGGAGTTCTTATTTGAAGTCACAGAAAGGACTCCTGGTCTTGGTCTaGTCCGCCTCCATGACCCTC +
Preference number: 4 (lower is better)
Translates to: CLEDLGNTGSSYLKSQKGLLVLV*SASMTL
Trigger: GAGGGTCATGGAGGCGGAGCAGACCAAGACCAGGAG...TCCTTTCTGTGACTTCAAATAAGAACTCCCAGTATTGCCTAAATCTTCTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCATCTCCAGCTGTCGCATaGGGCCCATGGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPSPAVA*GPWRHC
Trigger: ACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGA...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGAGGGTCAGTTTGGCCTaGAGGTCATCCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLRVSLA*RSSTVF
Trigger: AAAGACTGTGGATGACCTGCAGGCCAAACTGACCCT...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCCCACAGATGTGCTGCTaGCCTCAGCACCAACACCGC +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPPQMCC*PQHQHR
Trigger: GCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGG...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTCCTCCACAGATGTGCTaGTGCCCTCAGCACCAACAC +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFPPQMC*CPQHQH
Trigger: GTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGG...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPIQFHR*FNQNRA
Trigger: CGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGAT...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGCATCAGGCTCAGGTTTaGTCCCTGGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEHQAQV*SLADPP
Trigger: TGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATG...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAATTTGGCTCTTACTGCTaGCACCACTGCCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQFGSYC*HHCHCY
Trigger: GTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAA...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTCCTCAGGGGAGGTGCTaGTTTGGCTCTTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFPQGRC*FGSYCC
Trigger: GCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGG...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGGCCCTCAGGGGAGGTaGTGCTTTGGCTCTTACTGC +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTGPQGR*CFGSYC
Trigger: GCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGGCC...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACACACCTCGTCTTTATCTaGCACTGTGTCTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTHLVFI*HCVSSL
Trigger: CAATGAGGAGACACAGTGGCAGATAAAGACGAGGTG...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGTGGCGGCATTGTACCTaGCTGCCGTCTCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQWRHCT*LPSPYA
Trigger: TGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCA...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGTTGCCAGGGTCAGTTTaGCCTGCAGGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQLPGSV*PAGHPQ
Trigger: CTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAA...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAACTCAGGTTTGCTCCCTaGCAGATCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQLRFAP*QILHRC
Trigger: ACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAG...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYKLDTD*VSESSS
Trigger: TGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTT...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTTCGAGGGCCCAACACTaGGAACATCATCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGSRAQH*EHHPKL
Trigger: GAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGA...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACGGCCTTCTGAAAGGTaGCTGCTGTACCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIRPSER*LLYHGP
Trigger: GGGCCCGTGGTACAGCAGCCACCTTTCAGAAGGCCG...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR TCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATATCTGCTCCGCCTCCATaGCCCTCTGAGTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPISAPPP*PSEWRD
Trigger: ATCACGCCACTCAGAGGGTCATGGAGGCGGAGCAGA...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCCATCATCCCAAACTCTaGCAGGGACACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPHHPKL*QGHRAG
Trigger: CCCAGCCCTGTGTCCCTGTCAGAGTTTGGGATGATG...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAAGCCCTCAAGGTCACTaGAACTTCATTAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTSPQGH*NFIRAV
Trigger: AACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCT...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTGGCATTGTACCTGGCTaGCGTCTCCTTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFGIVPG*RLLMHQ
Trigger: CTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCC...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGCTTGTACTCGCCTTTTaGCAGGGTCAGTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQLVLAF*QGQFGL
Trigger: CAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAG...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGACTTGTTTTATTCTCTaGCCCTTCTGCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLTCFIL*PFCPVS
Trigger: GGAGACAGGGCAGAAGGGGCAGAGAATAAAACAAGT...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTCCTCAGGGGAGGTGCTaGTTTGGCTCTTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTPQGRC*FGSYCC
Trigger: GCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGG...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGCACTGTAGGGAGAGCTaGTTCATCCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQHCRES*FIRFSK
Trigger: CTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTG...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACATTGCCAACACATGCCTaGCTACTCCCTTTCCTAACT +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTLPTHA*LLPFLT
Trigger: AGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAA...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATGCCTTTGCCAACACATaGCTGCCTACTCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYAFANT*LPTPFP
Trigger: AGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGC...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACTATTAACAGCCTTTaGCAACACATGCCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTTINSL*QHMPAY
Trigger: GTAGGCAGGCATGTGTTGGCAAAGGCTGTTAATAGT...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTCTTAAGCTTCGAGACTaGAGTGTGCAGCCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTLKLRD*SVQPRP
Trigger: GGGCCTCGGCTGCACACTGCAGTCTCGAAGCTTAAG...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTTGGCGGCATTGTACCTaGCTGCCGTCTCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFWRHCT*LPSPYA
Trigger: TGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCA...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGKLDTD*VSESSS
Trigger: TGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTT...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGTCGAGGGCCCAACACTaGGAACATCATCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTESRAQH*EHHPKL
Trigger: GAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGA...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAGGCCCCGGTTGTTGTTaGCTTTGTCACTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPGPGCC*LCHLFY
Trigger: ATAAAACAAGTGACAAAGCCAACAACAACCGGGGCC...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCACATGGGCTGTCAGCTaGCTCTGTCCTCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPTWAVS*LCPQGF
Trigger: GAAGCCCTGAGGACAGAGCCAGCTGACAGCCCATGT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS-3UTR CCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACATCTGCAAACACCTACTaGACCTCAAGTTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTSANTY*TSSSVS
Trigger: GGAGACTGAACTTGAGGTCCAGTAGGTGTTTGCAGA...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
3UTR CAA 72 bp TGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGCGGAACTTCTGACGAG +
Preference number: 4 (lower is better)
Translates to: CQFSSPVHPVSP*LQPEQSGTSDE
Trigger: CTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR TCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTCTCGTGGATCTCATCTaGGATCATCTCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGLVDLI*DHLQVL
Trigger: AAGAACCTGGAGATGATCTCAGATGAGATCCACGAG...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACTCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTTTTAAAAGCCCCCTCTaGACACCAGAGGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGFKSPL*TPEVVK
Trigger: TTTCACCACCTCTGGTGTTCAGAGGGGGCTTTTAAA...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCGGCATTGTACCTGGCTaGCGTCTCCTTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPGIVPG*RLLMHQ
Trigger: CTGGTGCATAAGGAGACGGCAGCCAGGTACAATGCC...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGAGGGTCAGTTTGGCCTaGAGGTCATCCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTERVSLA*RSSTVF
Trigger: AAAGACTGTGGATGACCTGCAGGCCAAACTGACCCT...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAAACTTGTTTTATTCTCTaGCCCTTCTGCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQTCFIL*PFCPVS
Trigger: GGAGACAGGGCAGAAGGGGCAGAGAATAAAACAAGT...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCATGCTTTGGCTCTTACTaGTGCCACCACTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPCFGSY*CHHCHC
Trigger: GCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCA...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTTTGCCAACACATGCCTaGCTACTCCCTTTCCTAACT +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGLPTHA*LLPFLT
Trigger: AGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAA...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTGACCACAGCACTCCATaGTCTTCCTTATGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCDHSTP*SSLWKK
Trigger: CTTTTTCCATAAGGAAGAGCATGGAGTGCTGTGGTC...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCACCGAGATCACGCCATTaGACTCCAGCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPPRSRH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAATGGCGTGATCTCGG...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR CCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTTTGCCAGGGTCAGTTTaGCCTGCAGGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTLPGSV*PAGHPQ
Trigger: CTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAA...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPPPSRA*SLPQLC
Trigger: GCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGG...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEKLDTD*VSESSS
Trigger: TGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTT...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAACAACCGCAGGGAACTaGTCAGGCATCTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPITTAGN*SGISDG
Trigger: CCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGT...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACGGCCCCGGTTGTTGTTaGCTTTGTCACTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYGPGCC*LCHLFY
Trigger: ATAAAACAAGTGACAAAGCCAACAACAACCGGGGCC...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTATAAATCCCCTTGGCTaGCAGGATAAGGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCINPLG*QDKAYA
Trigger: AGCATAAGCCTTATCCTGCCAGCCAAGGGGATTTAT...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp CTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACAAAGATTTAGGCAATACTaGGAGTTCTTATTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LGWQDKAYAVEPSPPQPQRFRQY*EFLFEV
Trigger: GACTTCAAATAAGAACTCCCAGTATTGCCTAAATCT...TTGTGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CCA 90 bp GCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTGCTTCAACCAGAACAGATCTGCAAACACCTACTaGACCTCAAGTTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ANFLHQFIQFHRCFNQNRSANTY*TSSSVS
Trigger: GGAGACTGAACTTGAGGTCCAGTAGGTGTTTGCAGA...TCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR TCA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTISSVD*FNFSSS
Trigger: AGAACTGGAGAAGTTAAATCAGTCCACGGATGATAT...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp TTCACATGCACTTCTCTTAGAATAAATCCCCTTGGCTGGCAGGATAAGGCTTATTTTAAAAGCCCCCTCTaGACACCAGAGGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: FTCTSLRINPLGWQDKAYFKSPL*TPEVVK
Trigger: TTTCACCACCTCTGGTGTTCAGAGGGGGCTTTTAAA...ATAAGCCTTATCCTGCCAGCCAAGGGGATTTATTCTAAGAGAAGTGCATGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR TCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGAAAATGATTACTGGTaGCCACAGCACTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEENDYW*PQHSML
Trigger: GAGCATGGAGTGCTGTGGTCACCAGTAATCATTTTC...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR TCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCACTTTTGACGGCCTTCTaGAAGGTGGCTGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPLLTAF*KVAAVP
Trigger: TGGTACAGCAGCCACCTTTCAGAAGGCCGTCAAAAG...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAAAGTGTAACCCCTGTTaGTGGGCACACTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPKCNPC*WAHSGQ
Trigger: TTGGCCAGAGTGTGCCCATCAACAGGGGTTACACTT...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCCTTGTACTCGCCTTTTaGCAGGGTCAGTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPLVLAF*QGQFGL
Trigger: CAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAG...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAGATCCTCCACAGATGTaGTGCTGCCCTCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIDPPQM*CCPQHQ
Trigger: TTGGTGCTGAGGGCAGCAGCACATCTGTGGAGGATC...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACATCAGGCTCAGGTTTaGTCCCTGGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIHQAQV*SLADPP
Trigger: TGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATG...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGACTTGTTTTATTCTCTaGCCCTTCTGCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTETCFIL*PFCPVS
Trigger: GGAGACAGGGCAGAAGGGGCAGAGAATAAAACAAGT...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTTTTGGCTCTTACTGCTaGCACCACTGCCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTFGSYC*HHCHCY
Trigger: GTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAA...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCTTTGGCTCTTACTGCTaGCACCACTGCCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPFGSYC*HHCHCY
Trigger: GTAGCAGTGGCAGTGGTGGCAGCAGTAAGAGCCAAA...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTCAGGAGCATGGAGAATaGATTGAGCTGGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGQEHGE*IELGFK
Trigger: CTTAAATCCCAGCTCAATGCATTCTCCATGCTCCTG...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR CCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTAAGCTGGACACGGACTaGGTTTCCGAGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFKLDTD*VSESSS
Trigger: TGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTT...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGGCCCCGGTTGTTGTTaGCTTTGTCACTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGGPGCC*LCHLFY
Trigger: ATAAAACAAGTGACAAAGCCAACAACAACCGGGGCC...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCAGGGGAGGTGCTGCTTTaGCTCTTACTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSGEVLL*LLLLPP
Trigger: TGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCC...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CCA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCATATCGTGGGATAAAGTaGAGAGGACATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPYRGIK*RGHLHF
Trigger: AAAATGGAGATGTCCTCTCCACTTTATCCCACGATA...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp GCTACTGCTGAGGCCCCGGTTGTTGTTGGCTTTGTCACTTGTTTTATTCTCTGCTTTTTAAGCCTCCACTaGGTCAAAAATATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ATAEAPVVVGFVTCFILCFLSLH*VKNMCS
Trigger: AGAGCACATATTTTTGACCCAGTGGAGGCTTAAAAA...GCAGAGAATAAAACAAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000412806.1
3UTR CAA 72 bp CCACAGCACTCCATGCTCTTCCTTATGGAAAAAGGGTaGCCTAGAAGATTTAGGCAATACTGGGAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PQHSMLFLMEKG*PRRFRQYWEFL
Trigger: TAAGAACTCCCAGTATTGCCTAAATCTTCTAGGCAACCCTTTTTCCATAAGGAAGAGCATGGAGTGCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR TCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTISSVD*FNFSSS
Trigger: AGAACTGGAGAAGTTAAATCAGTCCACGGATGATAT...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYISSVD*FNFSSS
Trigger: AGAACTGGAGAAGTTAAATCAGTCCACGGATGATAT...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp TGCCTAGAAGATTTAGGCAATACTGGGAGTTCTTATTTGAAGTCACAGAAAGGACAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: CLEDLGNTGSSYLKSQKGQSPVC*YHPWTD
Trigger: ATCAGTCCACGGATGATATCAACAGACGGGAGACTG...TCCTTTCTGTGACTTCAAATAAGAACTCCCAGTATTGCCTAAATCTTCTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR TCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTQSPVC*YHPWTD
Trigger: ATCAGTCCACGGATGATATCAACAGACGGGAGACTG...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR TCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTGAAAAGATGCTCTTTTaGCGGCCTTCTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFEKMLF*RPSERW
Trigger: CCACCTTTCAGAAGGCCGTCAAAAGAGCATCTTTTC...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR TCA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCTCTCTGCTTCAGTTATaGATCCCTTATTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCSLLQL*IPYFFK
Trigger: CTTGAAGAAATAAGGGATTCATAACTGAAGCAGAGA...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCACTCCAGGAGACAGGATaGATCCCACAGGATCCTAAA +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPLQETG*IPQDPK
Trigger: TTTAGGATCCTGTGGGATTCATCCTGTCTCCTGGAG...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCAGGGTCAGTTTGGCCTaGAGGTCATCCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPRVSLA*RSSTVF
Trigger: AAAGACTGTGGATGACCTGCAGGCCAAACTGACCCT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCTTCAGACACAAAGTTaGTACAGCTGTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLLQTQS*YSCHLQ
Trigger: TTGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAG...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGTTATTGCTTCCACAATaGCGTTATACGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLLLLPQ*RYTECS
Trigger: GGAACATTCCGTATAACGGCATTGTGGAAGCAATAA...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAATCAAGCAAGAAAAGATaGTCTTTTGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQSSKKR*SFDGLL
Trigger: CAGAAGGCCGTCAAAAGAGCATCTTTTCTTGCTTGA...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTATCTCCCAGTTCTCTCTaGTTCAGTTATGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLSPSSL*FSYESL
Trigger: AAGGGATTCATAACTGAAGCAGAGAGAACTGGGAGA...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTAGAGCGAAATTCTATATaGTTCACACCAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLERNSI*FTPTPG
Trigger: TCCTGGAGTTGGTGTGAAGCATATAGAATTTCGCTC...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR TCA 90 bp GCTTGGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCAATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWSLPQLCQFSSPVHPVSISSVD*FNFSSS
Trigger: AGAACTGGAGAAGTTAAATCAGTCCACGGATGATAT...TGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR TCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTACAAGAACTCTGCTCTaGAAAACCAGCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTTRTLL*KTSPRA
Trigger: AGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGT...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTIQFHR*FNQNRA
Trigger: CGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGAT...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAACTTCAGACACAAAGTTaGTACAGCTGTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQLQTQS*YSCHLQ
Trigger: TTGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAG...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCACACTGTAGGGAGAGCTaGTTCATCCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSHCRES*FIRFSK
Trigger: CTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTG...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCACCTCTTCACACCCTCTaGCATGTATCTGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPPLHTL*HVSDEF
Trigger: GAACTCATCAGATACATGGCAGAGGGTGTGAAGAGG...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR CCA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAATATCGTGGGATAAAGTaGAGAGGACATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQYRGIK*RGHLHF
Trigger: AAAATGGAGATGTCCTCTCCACTTTATCCCACGATA...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGTATCGTGGGATAAAGTaGAGAGGACATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKYRGIK*RGHLHF
Trigger: AAAATGGAGATGTCCTCTCCACTTTATCCCACGATA...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTATATCGTGGGATAAAGTaGAGAGGACATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLYRGIK*RGHLHF
Trigger: AAAATGGAGATGTCCTCTCCACTTTATCCCACGATA...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCTCCATGTATAAATGTTaGTATGCACATCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPSMYKC*YAHRPG
Trigger: CCCTGGCCGATGTGCATATCAACATTTATACATGGA...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAAGCCCTCAAGGTCACTaGAACTTCATTAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPSPQGH*NFIRAV
Trigger: AACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCT...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCAGCCCTCAAGGTCACTaGAACTTCATTAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPSPQGH*NFIRAV
Trigger: AACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR TCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAACAAGAACTCTGCTCTaGAAAACCAGCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPITRTLL*KTSPRA
Trigger: AGCTCTTGGGCTGGTTTTTCAGAGCAGAGTTCTTGT...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACTGCACATAGTACTTTaGCTTGAGTTCAAAATAAGG +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLLHIVL*LEFKIR
Trigger: CCTTATTTTGAACTCAAGGCAAAGTACTATGTGCAG...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTAATGAATCAGCCAATCTaGACCATTTTTATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLMNQPI*TIFMSA
Trigger: TGCTGACATAAAAATGGTGCAGATTGGCTGATTCAT...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGTTATTGCTTCCACAATaGCGTTATACGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQLLLPQ*RYTECS
Trigger: GGAACATTCCGTATAACGGCATTGTGGAAGCAATAA...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCATAGGAACTAGTTATTaGTTCCACAATGCCGTTATA +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELIGTSY*FHNAVI
Trigger: TATAACGGCATTGTGGAAGCAATAACTAGTTCCTAT...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAATAGGAACTAGTTATTaGTTCCACAATGCCGTTATA +
Preference number: 4 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTIGTSY*FHNAVI
Trigger: TATAACGGCATTGTGGAAGCAATAACTAGTTCCTAT...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAACTATTAACAGCCTTTaGCAACACATGCCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPTINSL*QHMPAY
Trigger: GTAGGCAGGCATGTGTTGGCAAAGGCTGTTAATAGT...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR GCA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTTATGGAAAAAGGGTTaGCTAGAAGATTTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELLWKKG*LEDLGN
Trigger: ATTGCCTAAATCTTCTAGGCAACCCTTTTTCCATAA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTTTTTTCTCCACAGCATaGTTTAATAATGAAATGCGG +
Preference number: 4 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCFFSTA*FNNEMR
Trigger: CCGCATTTCATTATTAAAGCATGCTGTGGAGAAAAA...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGGCCCCGGTTGTTGTTaGCTTTGTCACTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTGPGCC*LCHLFY
Trigger: ATAAAACAAGTGACAAAGCCAACAACAACCGGGGCC...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTTTTTTAAGCCTCCACTaGGTCAAAAATATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGFLSLH*VKNMCS
Trigger: AGAGCACATATTTTTGACCCAGTGGAGGCTTAAAAA...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR TCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAATAATTCTCTGGGGATaGGAACTGACTGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIIILWG*ELTDSN
Trigger: GTTGCTGTCAGTCAGTTCTCATCCCCAGAGAATTAT...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGCTGCACATAGTACTTTaGCTTGAGTTCAAAATAAGG +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTELHIVL*LEFKIR
Trigger: CCTTATTTTGAACTCAAGGCAAAGTACTATGTGCAG...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR GCA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTCTTCAGACACAAAGTTaGTACAGCTGTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: PEEQSLALKVTETSLEQFLQTQS*YSCHLQ
Trigger: TTGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAG...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGATGAATCAGCCAATCTaGACCATTTTTATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEMNQPI*TIFMSA
Trigger: TGCTGACATAAAAATGGTGCAGATTGGCTGATTCAT...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAGAGAATGCATTGAGCTaGGATTTAAGGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIENALS*DLRRWQ
Trigger: TTGCCACCTCCTTAAATCCCAGCTCAATGCATTCTC...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATTCTCAACTCTGAATaGACATTTGAATTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPILNSE*TFEFPR
Trigger: CCGAGGGAATTCAAATGTGCATTCAGAGTTGAGAAT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CCA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGCACAGGATCCTAAAATaGGATTTGTATTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQHRILK*DLYLPF
Trigger: AAAAGGCAAATACAAATCCCATTTTAGGATCCTGTG...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR TCA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTAAGAAAGAATCCATCTaGTTCTCAACTCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTKKESI*FSTLNA
Trigger: TGCATTCAGAGTTGAGAATCAGATGGATTCTTTCTT...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR GCA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATGAATCAGCCAATCTaGACCATTTTTATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPMNQPI*TIFMSA
Trigger: TGCTGACATAAAAATGGTGCAGATTGGCTGATTCAT...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATATTATTGCTTCCACAATaGCGTTATACGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPILLLPQ*RYTECS
Trigger: GGAACATTCCGTATAACGGCATTGTGGAAGCAATAA...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR GCA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAATAGGAACTAGTTATTaGTTCCACAATGCCGTTATA +
Preference number: 4 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPIGTSY*FHNAVI
Trigger: TATAACGGCATTGTGGAAGCAATAACTAGTTCCTAT...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS GCA 90 bp CCGGCGCCCACGCGGGCGACACCTCCTCGCAGAGCCTGGACGCCGTaGCATGCCCGCGGTGCCGCGGCCGGGCAGGGGTACCCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: PAPTRATPPRRAWTP*HARGAAAGQGYPRG
Trigger: TCCTCGGGGGTACCCCTGCCCGGCCGCGGCACCGCGGGCATGGCACGGCGTCCAGGCTCTGCGAGGAGGTGTCGCCCGCGTGGGCGCCGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS CCA 90 bp CCACGGTGCCCGGCGCCCACGCGGGCGACACCTCCTCGCAGAGCCTaGACGCCGTGCCATGCCCGCGGTGCCGCGGCCGGGCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: PRCPAPTRATPPRRA*TPCHARGAAAGQGY
Trigger: GTACCCCTGCCCGGCCGCGGCACCGCGGGCATGGCACGGCGTCCAGGCTCTGCGAGGAGGTGTCGCCCGCGTGGGCGCCGGGCACCGTGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS GCA 90 bp ACCGGTGCCAGCCCGCGCTGCAGGGCAACGCCCACCCGCCCACGGTaGCCGGCGCCCACGCGGGCGACACCTCCTCGCAGAGCCTGGACG +
Preference number: 5 (lower is better)
Translates to: TGASPRCRATPTRPR*PAPTRATPPRRAWT
Trigger: CGTCCAGGCTCTGCGAGGAGGTGTCGCCCGCGTGGGCGCCGGGCACCGTGGGCGGGTGGGCGTTGCCCTGCAGCGCGGGCTGGCACCGGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS GCA 90 bp GCCCACGCGGGCGACACCTCCTCGCAGAGCCTGGACGCCGTGCCATaGCCGCGGTGCCGCGGCCGGGCAGGGGTACCCCCGAGGATACCA +
Preference number: 5 (lower is better)
Translates to: AHAGDTSSQSLDAVP*PRCRGRAGVPPRIP
Trigger: TGGTATCCTCGGGGGTACCCCTGCCCGGCCGCGGCACCGCGGGCATGGCACGGCGTCCAGGCTCTGCGAGGAGGTGTCGCCCGCGTGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS GCA 90 bp TTTCGGCTGGCTCCTCCGAGCGGCTCCGCTTCAGTGCCGCGTCCATaGAGGCAGCCGGCACGCGCGCCGCGCAGTGGGCTCCGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: FRLAPPSGSASVPRP*RQPARAPRSGLRSA
Trigger: GGCGCTCCGGAGCCCACTGCGCGGCGCGCGTGCCGGCTGCCTGCATGGACGCGGCACTGAAGCGGAGCCGCTCGGAGGAGCCAGCCGAAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000412806.1
ENST00000450625.1
CDS CCA 90 bp TTCCTCCTCCTCCTCCTCGTCCCGGGCAGGCGGCAGGATTTCGGCTaGCTCCTCCGAGCGGCTCCGCTTCAGTGCCGCGTCCATGCAGGC +
Preference number: 5 (lower is better)
Translates to: FLLLLLVPGRRQDFG*LLRAAPLQCRVHAG
Trigger: GCCTGCATGGACGCGGCACTGAAGCGGAGCCGCTCGGAGGAGCCAGCCGAAATCCTGCCGCCTGCCCGGGACGAGGAGGAGGAGGAGGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000412806.1
ENST00000450625.1
CDS-3UTR CAA 90 bp TCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATGGTCTCCTTGGCGGCACGGAGCAGGGAGATGGTCTCCTaGGCGGCACGGAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: SSSSRCSAREMVSLAARSREMVS*AARSTS
Trigger: AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCT...GCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CAA 90 bp GAGATGGTCTCCTTGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCCGGCCCATGGCGGCATaGTACCTGGCTGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: EMVSLAARSTSVALWKSCRPMAA*YLAAVS
Trigger: GGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCG...GCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGGAGACCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS GCA 90 bp CAGGCTCAGGTTTGCTCCCTGGCAGATCCTCCACAGATGTGCTGCTaGCCTCAGCACCAACACCGCATCCCCGAGGCCCCATGGCACTGG +
Preference number: 5 (lower is better)
Translates to: QAQVCSLADPPQMCC*PQHQHRIPEAPWHW
Trigger: CCAGTGCCATGGGGCCTCGGGGATGCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 90 bp CCACATGGGCTGTCAGCTGGCTCTGTCCTCAGGGCTTCTGCTGTCTaGATCGCTATCTCCTCCAGGGCACGGCTGCCTGACTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PHGLSAGSVLRASAV*IAISSRARLPDSFS
Trigger: TGAGAAGGAGTCAGGCAGCCGTGCCCTGGAGGAGATAGCGATGCAGACAGCAGAAGCCCTGAGGACAGAGCCAGCTGACAGCCCATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS TCA 90 bp CCGAGGCCCCATGGCACTGGAGCGCCGCCGCTCGTGGATCTCATCTaGGATCATCTCCAGGTTCTTCAGGGCCATCTTGTACTCGCCTTT +
Preference number: 5 (lower is better)
Translates to: PRPHGTGAPPLVDLI*DHLQVLQGHLVLAF
Trigger: AAAGGCGAGTACAAGATGGCCCTGAAGAACCTGGAGATGATCTCAGATGAGATCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CCA 90 bp CCTTGGCGGCACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTaGCTTTCTGAGCTTCCAGCTGAGCCTATATGCTTCACACCAACT +
Preference number: 5 (lower is better)
Translates to: PWRHGAPLWPSGSPA*LSELPAEPICFTPT
Trigger: AGTTGGTGTGAAGCATATAGGCTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTGCCGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417936.5
CDS-3UTR CAA 90 bp CGGAGTCGAACTGCCGCTTGTCATCCTCCAGCAGCCGCTGCTCGGCCAGGGAGATTGTTGATGGCTCTCTaGAGTTTCTTCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RSRTAACHPPAAAARPGRLLMAL*SFFSSC
Trigger: ACAGCTGGAGAAGAAACTCAAGAGAGCCATCAACAA...TCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTCGACTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CAA 90 bp CTGCCTCGCCACCCTCCGTGCCTCCCAGTAGGGCTTGGAGTCTTCCACAGCTTTCATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LPRHPPCLPVGLGVFHSFHPVSP*LQPEQS
Trigger: GCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATG...AAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CAA 90 bp AGGGGAGGAGGCCCCGCTGCATTCACTTCGAGGGCCCAACACTGGGAACATCATCTGAGGCCCCGGTTGTaGTTGGCTTTGTCACTTGTT +
Preference number: 5 (lower is better)
Translates to: RGGGPAAFTSRAQHWEHHLRPRL*LALSLV
Trigger: AACAAGTGACAAAGCCAACAACAACCGGGGCCTCAG...ATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS-3UTR CAA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACACGGCCCATGGCGGCATaGTACCTGGCTGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTRPMAA*YLAAVS
Trigger: GGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCG...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACGGCCCATGGCGGCATaGTACCTGGCTGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPRPMAA*YLAAVS
Trigger: GGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCG...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CAGATCCAGGCTGCCAGGCCTCACAACCGCAGGGAACTGGTCAGGCATCTCAGATTCCATCTCTTCCCTTaGAGCACTGTAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: QIQAARPHNRRELVRHLRFHLFP*STVGRA
Trigger: AGCTCTCCCTACAGTGCTCAAAGGGAAGAGATGGAA...TCTGAGATGCCTGACCAGTTCCCTGCGGTTGTGAGGCCTGGCAGCCTGGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS GCA 90 bp TCAGGGCTTCTGCTGTCTGCATCGCTATCTCCTCCAGGGCACGGCTaGCTGACTCCTTCTCATCATCCACATCTCAGCCCAAATGTCACA +
Preference number: 5 (lower is better)
Translates to: SGLLLSASLSPPGHG*LTPSHHPHLSPNVT
Trigger: TGTGACATTTGGGCTGAGATGTGGATGATGAGAAGGAGTCAGGCAGCCGTGCCCTGGAGGAGATAGCGATGCAGACAGCAGAAGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS-3UTR CAA 90 bp CCCTTCTGCCCTGTCTCCTCGTTCTACTTCACATTCAGGGGAGGAGGCCCCGCTAGGCCCCGGTTGTTGTaGGCTTTGTCACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: PFCPVSSFYFTFRGGGPARPRLL*ALSLVL
Trigger: TAAAACAAGTGACAAAGCCAACAACAACCGGGGCCT...AGCGGGGCCTCCTCCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS CCA 90 bp AACCAGATCTCTGCCTCGCCACCCTCCGTGCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCA +
Preference number: 5 (lower is better)
Translates to: NQISASPPSVPPSRA*SLPQLCQFSSPVHP
Trigger: TGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGAGATCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426925.5
ENST00000465894.6
CDS-3UTR CAA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCAGGGAGATGGTCTCCTaGGCGGCACGGAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCREMVS*AARSTS
Trigger: AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCT...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAAGGGAGATGGTCTCCTaGGCGGCACGGAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: PLYGMFHKGCEPSHSLPTREMVS*AARSTS
Trigger: AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCT...TGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCAGCTCGCTCCTGGTCTaGGTCTGCTCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCSSLLV*VCSASM
Trigger: CATGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCT...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTCGGCCCATGGCGGCATaGTACCTGGCTGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGRPMAA*YLAAVS
Trigger: GGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCG...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CACTGTAGGGAGAGCTGCTTCATCCGGTTCTCCAAGGCCTGGCCCTCAGGGGAGTCTTCAGACACAAAGTaGCTACAGCTGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: HCRESCFIRFSKAWPSGESSDTK*LQLSSS
Trigger: TGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGA...CTCCCCTGAGGGCCAGGCCTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS CCA 90 bp GCCAACATGGTGAAACCCCGCCTCTACCTAAATACAAAAATTAGCTaGGCATGGTTGTGGGAGCCTGTACTCCCAGCTACTCGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: ANMVKPRLYLNTKIS*AWLWEPVLPATREA
Trigger: AGCCTCCCGAGTAGCTGGGAGTACAGGCTCCCACAACCATGCCCAGCTAATTTTTGTATTTAGGTAGAGGCGGGGTTTCACCATGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366391.6
CDS CCA 90 bp GGTTCTTCAGGGCCATCTTGTACTCGCCTTTTGCCAGGGTCAGTTTaGCCTGCAGGTCATCCACAGTCTTTTTCAGTTGCTCGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GSSGPSCTRLLPGSV*PAGHPQSFSVARAA
Trigger: TGCAGCTCGAGCAACTGAAAAAGACTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGATGGCCCTGAAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGAGTCGAACTGCCGCTaGTCATCCTCCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTESNCR*SSSSSR
Trigger: GCGGCTGCTGGAGGATGACAAGCGGCAGTTCGACTC...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAAGCTCGCTCCTGGTCTaGGTCTGCTCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTSSLLV*VCSASM
Trigger: CATGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCT...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCAGCATCAGGCTCAGGTTaGCTCCCTGGCAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPASGSG*LPGRSS
Trigger: GGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGC...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS TCA 90 bp CCCTTATTTCTTCAAGCAAGAAAAGATGCTCTTTTGACGGCCTTCTaGAAGGTGGCTGCTGTACCACGGGCCCAGCACCTCTTCACACCC +
Preference number: 5 (lower is better)
Translates to: PLFLQARKDALLTAF*KVAAVPRAQHLFTP
Trigger: GGGTGTGAAGAGGTGCTGGGCCCGTGGTACAGCAGCCACCTTTCAGAAGGCCGTCAAAAGAGCATCTTTTCTTGCTTGAAGAAATAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417936.5
ENST00000426925.5
ENST00000465894.6
CDS GCA 90 bp AAAGGTGGCTGCTGTACCACGGGCCCAGCACCTCTTCACACCCTCTaGCATGTATCTGATGAGTTCCAAATAAGAGAACCAGATCTCTGC +
Preference number: 5 (lower is better)
Translates to: KGGCCTTGPAPLHTL*HVSDEFQIREPDLC
Trigger: GCAGAGATCTGGTTCTCTTATTTGGAACTCATCAGATACATGGCAGAGGGTGTGAAGAGGTGCTGGGCCCGTGGTACAGCAGCCACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426925.5
ENST00000465894.6
CDS-3UTR CAA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGAGCTCGCTCCTGGTCTaGGTCTGCTCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKSSLLV*VCSASM
Trigger: CATGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCT...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp GCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTGCTTCAACCAGAACAGAAGCTCGCTCCTGGTCTaGGTCTGCTCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: ANFLHQFIQFHRCFNQNRSSLLV*VCSASM
Trigger: CATGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCT...TCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CAA 90 bp CTTGGCTGGCAGGATAAGGCTTATGCTGTAGAACCTTCTCCCCCACAGCCACAACATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LGWQDKAYAVEPSPPQPQHPVSP*LQPEQS
Trigger: GCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATG...TTGTGGCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGCCAGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS TCA 90 bp GCATCCTCAAGTTCAGTCTCCCGTCTGTTGATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCTCCCTGGATCCGGGGATCCACCTCT +
Preference number: 5 (lower is better)
Translates to: ASSSSVSRLLISSVD*FNFSSSPWIRGSTS
Trigger: AGAGGTGGATCCCCGGATCCAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS TCA 90 bp TGGACCTCAAGTTCAGTCTCCCGTCTGTTGATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCTCCCCTCTGGCACCACATGGGCTGT +
Preference number: 5 (lower is better)
Translates to: WTSSSVSRLLISSVD*FNFSSSPLWHHMGC
Trigger: ACAGCCCATGTGGTGCCAGAGGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS TCA 90 bp TGGACCTCAAGTTCAGTCTCCCGTCTGTTGATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCTCCCTGGATCCGGGGATCCACCTCT +
Preference number: 5 (lower is better)
Translates to: WTSSSVSRLLISSVD*FNFSSSPWIRGSTS
Trigger: AGAGGTGGATCCCCGGATCCAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS GCA 90 bp AAAGGTGGCTGCTGTACCACGGGCCCAGCACCTCTTCACACCCTCTaGCATGTATCTGATGAGTTCCAAATAAGAGAACCAGATCTCTTC +
Preference number: 5 (lower is better)
Translates to: KGGCCTTGPAPLHTL*HVSDEFQIREPDLF
Trigger: GAAGAGATCTGGTTCTCTTATTTGGAACTCATCAGATACATGGCAGAGGGTGTGAAGAGGTGCTGGGCCCGTGGTACAGCAGCCACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417936.5
CDS-3UTR CAA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCCTGCTGAGGCCCCGGTaGTTGTTGGCTTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCLLRPR*LLALSL
Trigger: AAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAG...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTTTGCCAGGGTCAGTTaGGCCTGCAGGTCATCCACA +
Preference number: 5 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELFARVS*ACRSST
Trigger: TGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTCTGCTGAGGCCCCGGTaGTTGTTGGCTTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCLLRPR*LLALSL
Trigger: AAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAG...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CAA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAAAAGAGAAGCAAGCTGTaGCCCCCACTTTGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQKRSKL*PPLWPG
Trigger: GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTT...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGAAGAGAAGCAAGCTGTaGCCCCCACTTTGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKKRSKL*PPLWPG
Trigger: GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTT...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS TCA 90 bp AGCGGAACTTCTGACGAGCATCCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTTCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: SGTSDEHPQVQSPVC*YHPWTDLTSPVLPG
Trigger: TCCAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGCTCGTCAGAAGTTCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS TCA 90 bp AGCGGAACTTCTGACGAGCATCCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTTCTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: SGTSDEHPQVQSPVC*YHPWTDLTSPVLPS
Trigger: AGAGGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGCTCGTCAGAAGTTCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465894.6
CDS TCA 90 bp GCATCCTCAAGTTCAGTCTCCCGTCTGTTGATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCTCCCTTGGCAAGTGAGGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: ASSSSVSRLLISSVD*FNFSSSPLASEDSA
Trigger: TGCAGAGTCCTCACTTGCCAAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS TCA 90 bp AGCGGAACTTCTGACGAGCATCCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SGTSDEHPQVQSPVC*YHPWTDLTSPVLPW
Trigger: CCAAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGCTCGTCAGAAGTTCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS-3UTR CAA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAAGGGAGATGGTCTCCTaGGCGGCACGGAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPREMVS*AARSTS
Trigger: AGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCT...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACTCTTGTACTCGCCTTTaGCCAGGGTCAGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYSCTRL*PGSVWP
Trigger: AGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGA...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTGCATCAGGCTCAGGTTaGCTCCCTGGCAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: PEEQSLALKVTETSLEQFASGSG*LPGRSS
Trigger: GGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGC...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCCTGAGGCCCCGGTTGTaGTTGGCTTTGTCACTTGTT +
Preference number: 5 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELLRPRL*LALSLV
Trigger: AACAAGTGACAAAGCCAACAACAACCGGGGCCTCAG...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACACTGAGGCCCCGGTTGTaGTTGGCTTTGTCACTTGTT +
Preference number: 5 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTLRPRL*LALSLV
Trigger: AACAAGTGACAAAGCCAACAACAACCGGGGCCTCAG...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS TCA 90 bp GATCTGCAAACACCTACTGGACCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTTCTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: DLQTPTGPQVQSPVC*YHPWTDLTSPVLPS
Trigger: AGAGGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGTCCAGTAGGTGTTTGCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS TCA 90 bp AGCGGAACTTCTGACGAGCATCCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTTCTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: SGTSDEHPQVQSPVC*YHPWTDLTSPVLPE
Trigger: TTCAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGCTCGTCAGAAGTTCCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS TCA 90 bp GATCTGCAAACACCTACTGGACCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTTCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: DLQTPTGPQVQSPVC*YHPWTDLTSPVLPG
Trigger: TCCAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGTCCAGTAGGTGTTTGCAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS GCA 90 bp CACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTaGTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: HSFANFLHQFIQFHR*FNQNRAELLTSILK
Trigger: CTTGAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000426925.5
ENST00000459627.1
ENST00000465894.6
CDS-3UTR CAA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGTTTGCCAGGGTCAGTTaGGCCTGCAGGTCATCCACA +
Preference number: 5 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQFARVS*ACRSST
Trigger: TGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAA...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCAGCATCAGGCTCAGGTTaGCTCCCTGGCAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPASGSG*LPGRSS
Trigger: GGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGC...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp ACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACTGAGGCCCCGGTTGTaGTTGGCTTTGTCACTTGTT +
Preference number: 5 (lower is better)
Translates to: TMPLYGMFHKGCEPSHSLLRPRL*LALSLV
Trigger: AACAAGTGACAAAGCCAACAACAACCGGGGCCTCAG...TAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGCTGCTGAGGCCCCGGTaGTTGTTGGCTTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQLLRPR*LLALSL
Trigger: AAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAG...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGCTGCTGAGGCCCCGGTaGTTGTTGGCTTTGTCACTT +
Preference number: 5 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTELLRPR*LLALSL
Trigger: AAGTGACAAAGCCAACAACAACCGGGGCCTCAGCAG...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTAAGAGAAGCAAGCTGTaGCCCCCACTTTGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PEEQSLALKVTETSLEQFKRSKL*PPLWPG
Trigger: GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTT...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCACTGTGTCTCCTCATaGCCCACAGCTTTAGCAACA +
Preference number: 5 (lower is better)
Translates to: QCRYTECSTKAVNLVTVYHCVSS*PTALAT
Trigger: TGTTGCTAAAGCTGTGGGCAATGAGGAGACACAGTG...GTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS GCA 90 bp CTCTGCTTCAGTTATGAATCCCTTATTTCTTCAAGCAAGAAAAGATaGTCTTTTGACGGCCTTCTGAAAGGTGGCTGCTGTACCACGGGC +
Preference number: 5 (lower is better)
Translates to: LCFSYESLISSSKKR*SFDGLLKGGCCTTG
Trigger: GCCCGTGGTACAGCAGCCACCTTTCAGAAGGCCGTCAAAAGAGCATCTTTTCTTGCTTGAAGAAATAAGGGATTCATAACTGAAGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417936.5
ENST00000426925.5
ENST00000465894.6
CDS-3UTR CAA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCTTGTTGATGGCTCTCTaGAGTTTCTTCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCLLMAL*SFFSSC
Trigger: ACAGCTGGAGAAGAAACTCAAGAGAGCCATCAACAA...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGTCTTGTACTCGCCTTTaGCCAGGGTCAGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTESCTRL*PGSVWP
Trigger: AGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGA...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTCATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: YRGIKWRGHLHFPIQTEGHPVSP*LQPEQS
Trigger: GCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATG...ACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAAGGCCCCGGTTGTTGTaGGCTTTGTCACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTRPRLL*ALSLVL
Trigger: TAAAACAAGTGACAAAGCCAACAACAACCGGGGCCT...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTTTGTTGATGGCTCTCTaGAGTTTCTTCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCLLMAL*SFFSSC
Trigger: ACAGCTGGAGAAGAAACTCAAGAGAGCCATCAACAA...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CAA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTGAGTCTTCCACAGCTTaGCCAATTTTCTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCESSTA*PIFFTS
Trigger: ACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTC...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CAA 90 bp TGGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGGAGTCTTCCACAGCTTaGCCAATTTTCTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: WSLPQLCQFSSPVHPVSPESSTA*PIFFTS
Trigger: ACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTC...CGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CAA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCAGCATCAGGCTCAGGTTaGCTCCCTGGCAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSASGSG*LPGRSS
Trigger: GGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGC...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CAA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGTTCCATCTCTTCCCTTaGAGCACTGTAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTEFHLFP*STVGRA
Trigger: AGCTCTCCCTACAGTGCTCAAAGGGAAGAGATGGAA...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTTGCTTCAACCAACCGAGGAAACACAGTaGAGGCTTAAGAAGGGATCT +
Preference number: 5 (lower is better)
Translates to: QLCQFSSPVHPVSPLLQPTEETQ*RLKKGS
Trigger: AGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGGT...TGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450625.1
CDS-3UTR CAA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGTTGTTGATGGCTCTCTaGAGTTTCTTCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKLLMAL*SFFSSC
Trigger: ACAGCTGGAGAAGAAACTCAAGAGAGCCATCAACAA...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTTCTTGTACTCGCCTTTaGCCAGGGTCAGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTSCTRL*PGSVWP
Trigger: AGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGA...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp AAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGGGTGAGAAGAGAAAGGAGTCTTCCACAGCTTaGCCAATTTTCTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: KWRGHLHFPIQTEGEKRKESSTA*PIFFTS
Trigger: ACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTC...CTTTCTCTTCTCACCCTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp ATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGTCTTCAGACACAAAGTaGCTACAGCTGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: MFHKGCEPSHSLPTTRTLSSDTK*LQLSSS
Trigger: TGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGA...CAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CTTCCACAATGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACATCTTCAGACACAAAGTaGCTACAGCTGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: LPQCRYTECSTKAVNLVTSSDTK*LQLSSS
Trigger: TGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGA...TGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp GAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGTTGGCTTTGTCACTaGTTTTATTCTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: ECSTKAVNLVTVYPQQELCWLCH*FYSLPL
Trigger: AAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACA...GAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CAGCCTTTGCCAACACATGCCTGCCTACTCCCTTTCCTAACTTTAAAGAACTGTTGTTGGCTTTGTCACTaGTTTTATTCTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: QPLPTHACLLPFLTLKNCCWLCH*FYSLPL
Trigger: AAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACA...ACAGTTCTTTAAAGTTAGGAAAGGGAGTAGGCAGGCATGTGTTGGCAAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CAA 90 bp TGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACAACAAGAACTCTGCCGGTTGTTGTTGGCTTaGTCACTTGTTTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: CSTKAVNLVTVYPQQELCRLLLA*SLVLFS
Trigger: AGAGAATAAAACAAGTGACAAAGCCAACAACAACCG...GCAGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TGCCGTTATACGGAATGTTCCACAAAGGCTGTGAACCTAGTCACAGTCTACCCACGGTTGTTGTTGGCTTaGTCACTTGTTTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: CRYTECSTKAVNLVTVYPRLLLA*SLVLFS
Trigger: AGAGAATAAAACAAGTGACAAAGCCAACAACAACCG...TGGGTAGACTGTGACTAGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp AGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTGAGAGGCCCCGGTTGTTGTaGGCTTTGTCACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: RYRGIKWRGHLHFPIQTERPRLL*ALSLVL
Trigger: TAAAACAAGTGACAAAGCCAACAACAACCGGGGCCT...CTCAGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CCAGAAGAACAATCTTTAGCCCTCAAGGTCACTGAAACTTCATTAGAGCAGTTTTTCCATCTCTTCCCTTaGAGCACTGTAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: PEEQSLALKVTETSLEQFFHLFP*STVGRA
Trigger: AGCTCTCCCTACAGTGCTCAAAGGGAAGAGATGGAA...AAACTGCTCTAATGAAGTTTCAGTGACCTTGAGGGCTAAAGATTGTTCTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCAAAGAGAAGCAAGCTGTaGCCCCCACTTTGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSKRSKL*PPLWPG
Trigger: GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTT...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000412806.1
CDS-3UTR CAA 90 bp TTGGCACAATGTTCTCCAGTTCCATGTATAAATGTTGATATGCACATCGGCCAGACCGAGGAAACACAGTaGAGGCTTAAGAAGGGATCT +
Preference number: 5 (lower is better)
Translates to: LAQCSPVPCINVDMHIGQTEETQ*RLKKGS
Trigger: AGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGGT...CTGGCCGATGTGCATATCAACATTTATACATGGAACTGGAGAACATTGTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS TCA 90 bp TTCCAGCTGAGCCTATATGCTTCACACCAACTCCAGGAGACAGGATaGATCCCACAGGATCCTAAAATGGGATTTGTATTTGCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: FQLSLYASHQLQETG*IPQDPKMGFVFAFL
Trigger: TAAAAAGGCAAATACAAATCCCATTTTAGGATCCTGTGGGATTCATCCTGTCTCCTGGAGTTGGTGTGAAGCATATAGGCTCAGCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417936.5
ENST00000465894.6
CDS-3UTR CAA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCATTTGCCAGGGTCAGTTaGGCCTGCAGGTCATCCACA +
Preference number: 5 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSFARVS*ACRSST
Trigger: TGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAA...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CAA 90 bp TCTTTCATAGGAACTAGTTATTGCTTCCACAATGCCGTTATACGGAATGTTCCACATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: SFIGTSYCFHNAVIRNVPHPVSP*LQPEQS
Trigger: GCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATG...TGGAACATTCCGTATAACGGCATTGTGGAAGCAATAACTAGTTCCTATGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCTTCCATCTCTTCCCTTaGAGCACTGTAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPFHLFP*STVGRA
Trigger: AGCTCTCCCTACAGTGCTCAAAGGGAAGAGATGGAA...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTAGGCCCCGGTTGTTGTaGGCTTTGTCACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTRPRLL*ALSLVL
Trigger: TAAAACAAGTGACAAAGCCAACAACAACCGGGGCCT...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TCTGAAAAACCAGCCCAAGAGCTCTTACCCAGAAGAACAATCTTTAGCCCTCAACTTATGGAAAAAGGGTaGCCTAGAAGATTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: SEKPAQELLPRRTIFSPQLMEKG*PRRFRQ
Trigger: TTGCCTAAATCTTCTAGGCAACCCTTTTTCCATAAG...TTGAGGGCTAAAGATTGTTCTTCTGGGTAAGAGCTCTTGGGCTGGTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS TCA 90 bp AAGAGCGAAATTCTATATGCTTCACACCAACTCCAGGAGACAGGATaGATCCCACAGGATCCTAAAATGGGATTTGTATTTGCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: KSEILYASHQLQETG*IPQDPKMGFVFAFL
Trigger: TAAAAAGGCAAATACAAATCCCATTTTAGGATCCTGTGGGATTCATCCTGTCTCCTGGAGTTGGTGTGAAGCATATAGAATTTCGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS-3UTR CAA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAGAGTCTTCCACAGCTTaGCCAATTTTCTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPIESSTA*PIFFTS
Trigger: ACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTC...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS-3UTR CAA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCTCTTCAGACACAAAGTaGCTACAGCTGTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPSSDTK*LQLSSS
Trigger: TGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGA...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATACAAACTTGTTGGCTTTGTCACTaGTTTTATTCTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: FRYRGIKWRGHLHFPIQTCWLCH*FYSLPL
Trigger: AAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACA...AGTTTGTATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp CCTACAGAGAAATTAACATCTTGTCAATCTAATAACAGTGGCAACCATTCTTCAACTCTGAATGCACATTaGAATTCCCTCGGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PTEKLTSCQSNNSGNHSSTLNAH*NSLGEL
Trigger: AAGCTCCCCGAGGGAATTCAAATGTGCATTCAGAGT...TGAAGAATGGTTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS-3UTR CAA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATATGTTGGCTTTGTCACTaGTTTTATTCTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPICWLCH*FYSLPL
Trigger: AAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACA...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TCTTTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCCGGTTGTTGTTGGCTTaGTCACTTGTTTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: SFSFRYRGIKWRGHLHFPRLLLA*SLVLFS
Trigger: AGAGAATAAAACAAGTGACAAAGCCAACAACAACCG...GGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000412806.1
ENST00000426925.5
CDS-3UTR CAA 90 bp TTTTCATTTAGATATCGTGGGATAAAGTGGAGAGGACATCTCCATTTTCCCATAACTGGGAGTTCTTATTaGAAGTCACAGAAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FSFRYRGIKWRGHLHFPITGSSY*KSQKGE
Trigger: TTCTCCTTTCTGTGACTTCAAATAAGAACTCCCAGT...TATGGGAAAATGGAGATGTCCTCTCCACTTTATCCCACGATATCTAAATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383791.8
CDS GCA 72 bp GGCGACACCTCCTCGCAGAGCCTGGACGCCGTGCCATaGCCGCGGTGCCGCGGCCGGGCAGGGGTACCCCCG +
Preference number: 6 (lower is better)
Translates to: GDTSSQSLDAVP*PRCRGRAGVPP
Trigger: CGGGGGTACCCCTGCCCGGCCGCGGCACCGCGGGCATGGCACGGCGTCCAGGCTCTGCGAGGAGGTGTCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS GCA 72 bp AGCCCGCGCTGCAGGGCAACGCCCACCCGCCCACGGTaGCCGGCGCCCACGCGGGCGACACCTCCTCGCAGA +
Preference number: 6 (lower is better)
Translates to: SPRCRATPTRPR*PAPTRATPPRR
Trigger: TCTGCGAGGAGGTGTCGCCCGCGTGGGCGCCGGGCACCGTGGGCGGGTGGGCGTTGCCCTGCAGCGCGGGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS GCA 72 bp ACGCGGGCGACACCTCCTCGCAGAGCCTGGACGCCGTaGCATGCCCGCGGTGCCGCGGCCGGGCAGGGGTAC +
Preference number: 6 (lower is better)
Translates to: TRATPPRRAWTP*HARGAAAGQGY
Trigger: GTACCCCTGCCCGGCCGCGGCACCGCGGGCATGGCACGGCGTCCAGGCTCTGCGAGGAGGTGTCGCCCGCGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS GCA 72 bp GCTCCTCCGAGCGGCTCCGCTTCAGTGCCGCGTCCATaGAGGCAGCCGGCACGCGCGCCGCGCAGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: APPSGSASVPRP*RQPARAPRSGL
Trigger: GAGCCCACTGCGCGGCGCGCGTGCCGGCTGCCTGCATGGACGCGGCACTGAAGCGGAGCCGCTCGGAGGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000412806.1
ENST00000450625.1
CDS GCA 72 bp CCTTTGTTGCACATCCACCCGAACCACCAGGCACGCTaGACCGACCCCGATCCTGCTACGGGTCGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: PLLHIHPNHQAR*TDPDPATGRRG
Trigger: CCCCCGCCGACCCGTAGCAGGATCGGGGTCGGTGCAGCGTGCCTGGTGGTTCGGGTGGATGTGCAACAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459627.1
CDS CCA 72 bp CAGCACCAACACCGCATCCCCGAGGCCCCATGGCACTaGAGCGCCGCCGCTCGTGGATCTCATCTGAGATCA +
Preference number: 6 (lower is better)
Translates to: QHQHRIPEAPWH*SAAARGSHLRS
Trigger: TGATCTCAGATGAGATCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTCGGGGATGCGGTGTTGGTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 72 bp GTTTGCTCCCTGGCAGATCCTCCACAGATGTGCTGCTaGCCTCAGCACCAACACCGCATCCCCGAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: VCSLADPPQMCC*PQHQHRIPEAP
Trigger: TGGGGCCTCGGGGATGCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 72 bp CAGGTTTGCTCCCTGGCAGATCCTCCACAGATGTGCTaGTGCCCTCAGCACCAACACCGCATCCCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: QVCSLADPPQMC*CPQHQHRIPEA
Trigger: GGCCTCGGGGATGCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CCA 72 bp CCCCGAGGCCCCATGGCACTGGAGCGCCGCCGCTCGTaGATCTCATCTGAGATCATCTCCAGGTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PRGPMALERRRS*ISSEIISRFFR
Trigger: CCTGAAGAACCTGGAGATGATCTCAGATGAGATCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CCA 72 bp CACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTaGCTTTCTGAGCTTCCAGCTGAGCCTGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: HGAPLWPSGSPA*LSELPAEPGRW
Trigger: CCACCTCCCAGGCTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS GCA 72 bp GCTCAGGTTTGCTCCCTGGCAGATCCTCCACAGATGTaGTGCTGCCCTCAGCACCAACACCGCATCCCCGAG +
Preference number: 6 (lower is better)
Translates to: AQVCSLADPPQM*CCPQHQHRIPE
Trigger: CTCGGGGATGCGGTGTTGGTGCTGAGGGCAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 72 bp ACATGGGCTGTCAGCTGGCTCTGTCCTCAGGGCTTCTaGTGTCTGCATCGCTATCTCCTCCAGGGCACGGCT +
Preference number: 6 (lower is better)
Translates to: TWAVSWLCPQGF*CLHRYLLQGTA
Trigger: AGCCGTGCCCTGGAGGAGATAGCGATGCAGACAGCAGAAGCCCTGAGGACAGAGCCAGCTGACAGCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS GCA 72 bp CCTCCGAGGCCACAGAAATGGCATCAGGCTCAGGTTTaGTCCCTGGCAGATCCTCCACAGATGTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PPRPQKWHQAQV*SLADPPQMCCC
Trigger: GCAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGCCATTTCTGTGGCCTCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 72 bp GCTCAGGTTTGCTCCCTGGCAGATCCTCCACAGATGTaGTGGATCCGGGGATCCACCTCTTCTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AQVCSLADPPQM*WIRGSTSSSSS
Trigger: GGAGGAGGAAGAAGAGGTGGATCCCCGGATCCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS CCA 72 bp CAGGTTTGCTCCCTGGCAGATCCTCCACAGATGTGCTaGATCCGGGGATCCACCTCTTCTTCCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: QVCSLADPPQMC*IRGSTSSSSSS
Trigger: GCTGGAGGAGGAAGAAGAGGTGGATCCCCGGATCCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS CAA 72 bp GCCTCCGAGGCCACAGAAATGGCATCAGGCTCAGGTTaGCTCCCTGGCAGATCCTCCACAGATGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ASEATEMASGSG*LPGRSSTDVLL
Trigger: CAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGCCATTTCTGTGGCCTCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 72 bp CTGCTGTCTGCATCGCTATCTCCTCCAGGGCACGGCTaGCTGACTCCTTCTCATCATCCACATCTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LLSASLSPPGHG*LTPSHHPHLSP
Trigger: TGGGCTGAGATGTGGATGATGAGAAGGAGTCAGGCAGCCGTGCCCTGGAGGAGATAGCGATGCAGACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS GCA 72 bp CCTCCGAGGCCACAGAAATGGCATCAGGCTCAGGTTTaGTCCCTGGCAGATCCTCCACAGATGTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: PPRPQKWHQAQV*SLADPPQMCWI
Trigger: GATCCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGCCATTTCTGTGGCCTCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS CCA 72 bp CACGGAGCACCTCTGTGGCCCTCTGGAAGTCCTGCGTaGCTTTCTGAGCTTCCAGCTGAGCCTATATGCTTC +
Preference number: 6 (lower is better)
Translates to: HGAPLWPSGSPA*LSELPAEPICF
Trigger: GAAGCATATAGGCTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417936.5
CDS CAA 72 bp GCCTCCGAGGCCACAGAAATGGCATCAGGCTCAGGTTaGCTCCCTGGCAGATCCTCCACAGATGTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: ASEATEMASGSG*LPGRSSTDVLD
Trigger: ATCCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGCCATTTCTGTGGCCTCGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412806.1
CDS TCA 72 bp CATGGCACTGGAGCGCCGCCGCTCGTGGATCTCATCTaGGATCATCTCCAGGTTCTTCAGGGCCATCTTGTA +
Preference number: 6 (lower is better)
Translates to: HGTGAPPLVDLI*DHLQVLQGHLV
Trigger: TACAAGATGGCCCTGAAGAACCTGGAGATGATCTCAGATGAGATCCACGAGCGGCGGCGCTCCAGTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CCA 72 bp GATTTAACTTCTCCAGTTCTCCCCTCTGGCACCACATaGGCTGTCAGCTGGCTCTGTCCTCAGGGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: DLTSPVLPSGTT*AVSWLCPQGFC
Trigger: GCAGAAGCCCTGAGGACAGAGCCAGCTGACAGCCCATGTGGTGCCAGAGGGGAGAACTGGAGAAGTTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408919.7
CDS CCA 72 bp TCTGCCTCGCCACCCTCCGTGCCTCCCAGTAGGGCTTaGAGTCTTCCACAGCTTTGCCAATTTTCTTCACCA +
Preference number: 6 (lower is better)
Translates to: SASPPSVPPSRA*SLPQLCQFSSP
Trigger: TGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426925.5
ENST00000465894.6
CDS GCA 72 bp AATAAGAGAACCAGATCTCTGCCTCGCCACCCTCCGTaGCTCCCAGTAGGGCTTGGAGTCTTCCACAGCTTT +
Preference number: 6 (lower is better)
Translates to: NKRTRSLPRHPP*LPVGLGVFHSF
Trigger: AAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGAGATCTGGTTCTCTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426925.5
ENST00000465894.6
CDS TCA 72 bp CTTCAAGCAAGAAAAGATGCTCTTTTGACGGCCTTCTaGAAGGTGGCTGCTGTACCACGGGCCCAGCACCTC +
Preference number: 6 (lower is better)
Translates to: LQARKDALLTAF*KVAAVPRAQHL
Trigger: GAGGTGCTGGGCCCGTGGTACAGCAGCCACCTTTCAGAAGGCCGTCAAAAGAGCATCTTTTCTTGCTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417936.5
ENST00000426925.5
ENST00000465894.6
CDS CAA 90 bp AGGTTCTTCAGGGCCATCTTGTACTCGCCTTTTGCCAGGGTCAGTTaGGCCTGCAGGTCATCCACAGTCTTTTTCAGTTGCTCGAGCTGC +
Preference number: 6 (lower is better)
Translates to: RFFRAILYSPFARVS*ACRSSTVFFSCSSC
Trigger: GCAGCTCGAGCAACTGAAAAAGACTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGATGGCCCTGAAGAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CCA 72 bp GGGCCATCTTGTACTCGCCTTTTGCCAGGGTCAGTTTaGCCTGCAGGTCATCCACAGTCTTTTTCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: GPSCTRLLPGSV*PAGHPQSFSVA
Trigger: AGCAACTGAAAAAGACTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGATGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CAA 72 bp AGGGCCATCTTGTACTCGCCTTTTGCCAGGGTCAGTTaGGCCTGCAGGTCATCCACAGTCTTTTTCAGTTGC +
Preference number: 6 (lower is better)
Translates to: RAILYSPFARVS*ACRSSTVFFSC
Trigger: GCAACTGAAAAAGACTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGATGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS CAA 72 bp AGCATCCTGCAGCCAGGGGAAACCGAGGAAACACAGTaGAGGCTTAAGAAGGGATCTGCAAACACCTACTGG +
Preference number: 6 (lower is better)
Translates to: SILQPGETEETQ*RLKKGSANTYW
Trigger: CCAGTAGGTGTTTGCAGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGGTTTCCCCTGGCTGCAGGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408919.7
ENST00000450625.1
CDS CAA 90 bp CTTCTGACGAGCATCCTGCAGCCAGGGGAAACCGAGGAAACACAGTaGAGGCTTAAGAAGGGATCTGCAAACACCTACTGGACCTCAAGT +
Preference number: 6 (lower is better)
Translates to: LLTSILQPGETEETQ*RLKKGSANTYWTSS
Trigger: ACTTGAGGTCCAGTAGGTGTTTGCAGATCCCTTCTTAAGCCTCAACTGTGTTTCCTCGGTTTCCCCTGGCTGCAGGATGCTCGTCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408919.7
ENST00000450625.1
CDS GCA 72 bp ATCTTGTACTCGCCTTTTGCCAGGGTCAGTTTGGCCTaGAGGTCATCCACAGTCTTTTTCAGTTGCTCGAGC +
Preference number: 6 (lower is better)
Translates to: ILYSPFARVSLA*RSSTVFFSCSS
Trigger: GCTCGAGCAACTGAAAAAGACTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS TCA 72 bp AGTTCAGTCTCCCGTCTGTTGATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCTCCCTGGATCCGGGGA +
Preference number: 6 (lower is better)
Translates to: SSVSRLLISSVD*FNFSSSPWIRG
Trigger: TCCCCGGATCCAGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383791.8
ENST00000450625.1
CDS TCA 72 bp AGTTCAGTCTCCCGTCTGTTGATATCATCCGTGGACTaGTTTAACTTCTCCAGTTCTCCCCTCTGGCACCAC +
Preference number: 6 (lower is better)
Translates to: SSVSRLLISSVD*FNFSSSPLWHH
Trigger: GTGGTGCCAGAGGGGAGAACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408919.7
ENST00000465894.6
CDS GCA 72 bp CTCCAGTTCTCCCTGAATAGCCAGGAGCATGGAGAATaGATTGAGCTGGGATTTAAGGAGGTGGCAAGTGTA +
Preference number: 6 (lower is better)
Translates to: LQFSLNSQEHGE*IELGFKEVASV
Trigger: TACACTTGCCACCTCCTTAAATCCCAGCTCAATGCATTCTCCATGCTCCTGGCTATTCAGGGAGAACTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS CAA 90 bp CCACAGCTTTGCCAATTTTCTTCACCAGTTCATCCAGTTTCACCGTaGCTTCAACCAGAACAGAGCGGAACTTCTGACGAGCATCCTCAA +
Preference number: 6 (lower is better)
Translates to: PQLCQFSSPVHPVSP*LQPEQSGTSDEHPQ
Trigger: TTGAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000426925.5
ENST00000459627.1
ENST00000465894.6
CDS TCA 72 bp ATCCCTTATTTCTTCAAGCAAGAAAAGATGCTCTTTTaGCGGCCTTCTGAAAGGTGGCTGCTGTACCACGGG +
Preference number: 6 (lower is better)
Translates to: IPYFFKQEKMLF*RPSERWLLYHG
Trigger: CCCGTGGTACAGCAGCCACCTTTCAGAAGGCCGTCAAAAGAGCATCTTTTCTTGCTTGAAGAAATAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417936.5
ENST00000426925.5
ENST00000465894.6
CDS TCA 72 bp TCTGACGAGCATCCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: SDEHPQVQSPVC*YHPWTDLTSPV
Trigger: AACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGCTCGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383791.8
ENST00000426925.5
ENST00000459627.1
ENST00000465894.6
CDS TCA 72 bp ACACCTACTGGACCTCAAGTTCAGTCTCCCGTCTGTTaGTATCATCCGTGGACTGATTTAACTTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: TPTGPQVQSPVC*YHPWTDLTSPV
Trigger: AACTGGAGAAGTTAAATCAGTCCACGGATGATATCAACAGACGGGAGACTGAACTTGAGGTCCAGTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408919.7
ENST00000450625.1
CDS TCA 72 bp AGCCTATATGCTTCACACCAACTCCAGGAGACAGGATaGATCCCACAGGATCCTAAAATGGGATTTGTATTT +
Preference number: 6 (lower is better)
Translates to: SLYASHQLQETG*IPQDPKMGFVF
Trigger: AAATACAAATCCCATTTTAGGATCCTGTGGGATTCATCCTGTCTCCTGGAGTTGGTGTGAAGCATATAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417936.5
ENST00000465894.6
CDS GCA 72 bp AGTTATGAATCCCTTATTTCTTCAAGCAAGAAAAGATaGTCTTTTGACGGCCTTCTGAAAGGTGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SYESLISSSKKR*SFDGLLKGGCC
Trigger: ACAGCAGCCACCTTTCAGAAGGCCGTCAAAAGAGCATCTTTTCTTGCTTGAAGAAATAAGGGATTCATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417936.5
ENST00000426925.5
ENST00000465894.6
CDS TCA 72 bp ATTCTATATGCTTCACACCAACTCCAGGAGACAGGATaGATCCCACAGGATCCTAAAATGGGATTTGTATTT +
Preference number: 6 (lower is better)
Translates to: ILYASHQLQETG*IPQDPKMGFVF
Trigger: AAATACAAATCCCATTTTAGGATCCTGTGGGATTCATCCTGTCTCCTGGAGTTGGTGTGAAGCATATAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426925.5
CDS GCA 72 bp AGTCTTTTTCAGTTGCTCGAGCTGCACATAGTACTTTaGCTTGAGTTCAAAATAAGGCTTGGACTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: SLFQLLELHIVL*LEFKIRLGLVD
Trigger: ATCAACAAGTCCAAGCCTTATTTTGAACTCAAGGCAAAGTACTATGTGCAGCTCGAGCAACTGAAAAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366391.6
ENST00000383791.8
ENST00000408919.7
ENST00000426925.5
CDS GCA 72 bp ACATTTAAGGGTAAACTCTCTTCTCCCAGTTCTCTCTaGTTCAGTTATGAATCCCTTATTTCTTCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: TFKGKLSSPSSL*FSYESLISSSK
Trigger: CTTGCTTGAAGAAATAAGGGATTCATAACTGAAGCAGAGAGAACTGGGAGAAGAGAGTTTACCCTTAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417936.5
ENST00000426925.5
ENST00000465894.6