RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3BP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000130147

Ensembl transcript IDs: ENST00000344528.8, ENST00000392011.7, ENST00000409212.5, ENST00000416021.5, ENST00000444916.5, ENST00000446904.5, ENST00000454947.1, ENST00000462602.6, ENST00000484097.1, ENST00000489601.1, ENST00000493436.5

Found 774 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCAACGAGCTGCAGTAGGCAGTCCCTTCAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGATGGGTGTAGCCTAGCTGGCGGGCCC +
Preference number: 1 (lower is better)
Translates to: WQRAAVGSPFRPLPR*RRAAHDGCSLAGGP
Trigger: GGGCCCGCCAGCTAGGCTACACCCATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCTGAAGGGACTGCCTACTGCAGCTCGTTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp AATCTGTCTGAGCAGCCGCCCCTTCCTCCCTCTTCAGCTCCGCGGTaGCAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: NLSEQPPLPPSSAPR*QQGTQGRRGLALQS
Trigger: GCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAGCTGAAGAGGGAGGAAGGGGCGGCTGCTCAGACAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp GAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGGGAATCAGAAACGCTCCCAGTGACC +
Preference number: 1 (lower is better)
Translates to: ERGPTTERASFRAEC*NAKCGRESETLPVT
Trigger: GGTCACTGGGAGCGTTTCTGATTCCCGGCCACACTTTGCATTTCAACACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp CACAGGAAGTGTCCTGGCACGTTGCTAAGGATCACCTCACTCTACTaGTTTGCCAGTATCAGTCCTTCCTCCTGCTCCCTTCCAACACGC +
Preference number: 1 (lower is better)
Translates to: HRKCPGTLLRITSLY*FASISPSSCSLPTR
Trigger: GCGTGTTGGAAGGGAGCAGGAGGAAGGACTGATACTGGCAAATCAGTAGAGTGAGGTGATCCTTAGCAACGTGCCAGGACACTTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR GCA 90 bp GAAGTGTCCTGGCACGTTGCTAAGGATCACCTCACTCTACTGATTTaGCAGTATCAGTCCTTCCTCCTGCTCCCTTCCAACACGCGACAT +
Preference number: 1 (lower is better)
Translates to: EVSWHVAKDHLTLLI*QYQSFLLLPSNTRH
Trigger: ATGTCGCGTGTTGGAAGGGAGCAGGAGGAAGGACTGATACTGGCAAATCAGTAGAGTGAGGTGATCCTTAGCAACGTGCCAGGACACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp CACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGGCTCTaGTTCGGTCATGAAGTTTTCTTCCTGTCCACAGAAGAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: HSICNKHESQWPPRL*FGHEVFFLSTEEAA
Trigger: TGCTGCCTCTTCTGTGGACAGGAAGAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp AGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGCCTTAGATaGAATGAAATGCAGAGTTTGGCAAATGGCAGCTGGCACCTCTGC +
Preference number: 1 (lower is better)
Translates to: RRHRYTRKEEGLSLR*NEMQSLANGSWHLC
Trigger: GCAGAGGTGCCAGCTGCCATTTGCCAAACTCTGCATTTCATTTCATCTAAGGCTTAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR GCA 90 bp GGACCACCTCACTCTCAAATGGCATTGTTCTTGTCAATGACTAATTaGACACTGGCAGGGGCCCTAAAGACTGTCAACTCATGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: GPPHSQMALFLSMTN*TLAGALKTVNSWLL
Trigger: AAGCAGCCATGAGTTGACAGTCTTTAGGGCCCCTGCCAGTGTGCAATTAGTCATTGACAAGAACAATGCCATTTGAGAGTGAGGTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR CCA 90 bp TGTTTCAAGAAAGCAGTTTTAGAGAATGAGATTCGGGATCCCAAATaGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTT +
Preference number: 1 (lower is better)
Translates to: CFKKAVLENEIRDPK*SLTTAGTQEVSWHV
Trigger: AACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTTGGGATCCCGAATCTCATTCTCTAAAACTGCTTTCTTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp AAGAATGAGCTGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTaGTTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACC +
Preference number: 1 (lower is better)
Translates to: KNELYPFTEKPLFPT*FTFLHAGSERGPTT
Trigger: GGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACAGCTCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp CTCACCAAAGATTCACATATTCTATGGATGGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACAATCAAATCCGAGGAGGGAGCAGGA +
Preference number: 1 (lower is better)
Translates to: LTKDSHILWMVIYYE*GKARKTIKSEEGAG
Trigger: TCCTGCTCCCTCCTCGGATTTGATTGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGACCATCCATAGAATATGTGAATCTTTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 90 bp AGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTaGAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTTACT +
Preference number: 1 (lower is better)
Translates to: SSGHLNANAGLHSAH*SSPKIHIFYGWSFT
Trigger: AGTAAATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR GCA 90 bp AACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGTCTaGACCCTAAAGTTATTAATGCAACACTGTGTCAAGTTCCTGATT +
Preference number: 1 (lower is better)
Translates to: NTRHLRRIVRFTQHV*TLKLLMQHCVKFLI
Trigger: AATCAGGAACTTGACACAGTGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTCTTCAGCTCCGCGGTaGCAGCAGGGCACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHSSAPR*QQGTQG
Trigger: GCCCTGCGTGCCCTGCTGTCACCGCGGAGCTGAAGA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGTCTTCAGCTCCGCGGTaGCAGCAGGGCACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: FLHAGSERGPTTERASFRSSAPR*QQGTQG
Trigger: GCCCTGCGTGCCCTGCTGTCACCGCGGAGCTGAAGA...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTATCTTCAGCTCCGCGGTaGCAGCAGGGCACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLSSAPR*QQGTQG
Trigger: GCCCTGCGTGCCCTGCTGTCACCGCGGAGCTGAAGA...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGAT +
Preference number: 2 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHRPLPR*RRAAHD
Trigger: ATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGGAGGGAGCAGGACCTaGGGCCTTCTCAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKGGSRT*GLLRKN
Trigger: ATTCTTTCTGAGAAGGCCCCAGGTCCTGCTCCCTCC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR CAA 90 bp GTTTGGCAAATGGCAGCTGGCACCTCTGCACATCAGCATAAGGCGTaGCTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTC +
Preference number: 2 (lower is better)
Translates to: VWQMAAGTSAHQHKA*LVRPTTASAISTRV
Trigger: GACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAGCAACGCCTTATGCTGATGTGCAGAGGTGCCAGCTGCCATTTGCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHFRAEC*NAKCGR
Trigger: CCGGCCACACTTTGCATTTCAACACTCAGCCCGGAA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACA +
Preference number: 2 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHVIYYE*GKARKT
Trigger: TGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGAC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGGAGGGAGCAGGACCTaGGGCCTTCTCAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLGGSRT*GLLRKN
Trigger: ATTCTTTCTGAGAAGGCCCCAGGTCCTGCTCCCTCC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAGCATCTTTCCGGGCTaGGTGTTGAAATGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSIFPG*VLKCKV
Trigger: CACTTTGCATTTCAACACTCAGCCCGGAAAGATGCT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGCTCTGATTCGGTCATaGAGTTTTCTTCCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKALIRS*SFLPVH
Trigger: GTGGACAGGAAGAAAACTTCATGACCGAATCAGAGC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGCTCTGATTCGGTCATaGAGTTTTCTTCCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: LVRPTTASAISTRVSGHQALIRS*SFLPVH
Trigger: GTGGACAGGAAGAAAACTTCATGACCGAATCAGAGC...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTTGTCAATGACTAATTaGACACTGGCAGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKLSMTN*TLAGAL
Trigger: TAGGGCCCCTGCCAGTGTGCAATTAGTCATTGACAA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGAT +
Preference number: 2 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHRPLPR*RRAAHD
Trigger: ATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACA +
Preference number: 2 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHVIYYE*GKARKT
Trigger: TGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGAC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTATGGCCACCAAGGCTCTaGTTCGGTCATGAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLWPPRL*FGHEVF
Trigger: GAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCA...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGAT +
Preference number: 2 (lower is better)
Translates to: THCEIHTACLHPKVINATRPLPR*RRAAHD
Trigger: ATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAGAAAGCTATGTGATTaGCAACGAGCTGCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: FLHAGSERGPTTERASFRRKLCD*QRAAVG
Trigger: GCCTACTGCAGCTCGTTGCCAATCACATAGCTTTCT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGCTGTACCCGTTTACTaGAAAGCCACTTTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLAVPVY*KATFSH
Trigger: GTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACAGC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACATTGTTCTTGTCAATaGCTAATTGCACACTGGCAG +
Preference number: 2 (lower is better)
Translates to: LVRPTTASAISTRVSGHQHCSCQ*LIAHWQ
Trigger: CTGCCAGTGTGCAATTAGTCATTGACAAGAACAATG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR GCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACTCTATGGGAAGCACTaGTTTGACCTCAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: LVRPTTASAISTRVSGHQLYGKH*FDLKEK
Trigger: TTTTTCCTTGAGGTCAAAGCAGTGCTTCCCATAGAG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGAAAGCTATGTGATTaGCAACGAGCTGCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLRKLCD*QRAAVG
Trigger: GCCTACTGCAGCTCGTTGCCAATCACATAGCTTTCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGTTTCATCTAAACTATaGCTTCCTTCCGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHVSSKL*LPSEET
Trigger: TGTCTCCTCGGAAGGAAGTCATAGTTTAGATGAAAC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCACATATTCTATGGATaGTCATTTACTACGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHHIFYG*SFTTSE
Trigger: CTCACTCGTAGTAAATGACCATCCATAGAATATGTG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: THCEIHTACLHPKVINATFRAEC*NAKCGR
Trigger: CCGGCCACACTTTGCATTTCAACACTCAGCCCGGAA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCTTACACGCAGGGAGTaGAAGAGGTCCAACAACCGA +
Preference number: 2 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHLTRRE*KRSNNR
Trigger: TCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGGAGGGAGCAGGACCTaGGGCCTTCTCAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: THCEIHTACLHPKVINATGGSRT*GLLRKN
Trigger: ATTCTTTCTGAGAAGGCCCCAGGTCCTGCTCCCTCC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAAGACTGTCAACTCATaGCTGCTTTCTAATCTATTG +
Preference number: 2 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKKTVNS*LLSNLL
Trigger: CAATAGATTAGAAAGCAGCCATGAGTTGACAGTCTT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCAGAAACGCTCCCAGTaGCCTTTAAATACCTATATA +
Preference number: 2 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHQKRSQ*PLNTYI
Trigger: TATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATTGGCAAATGGCAGCTaGCACCTCTGCACATCAGCA +
Preference number: 2 (lower is better)
Translates to: THCEIHTACLHPKVINATLANGS*HLCTSA
Trigger: TGCTGATGTGCAGAGGTGCCAGCTGCCATTTGCCAA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATTGAAATGCAAAGTGTaGCCGGGAATCAGAAACGCT +
Preference number: 2 (lower is better)
Translates to: THCEIHTACLHPKVINATLKCKV*PGIRNA
Trigger: AGCGTTTCTGATTCCCGGCCACACTTTGCATTTCAA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAAGCAGTTTTAGAGAATaGGATTCGGGATCCCAAATG +
Preference number: 2 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTSSFRE*DSGSQM
Trigger: CATTTGGGATCCCGAATCTCATTCTCTAAAACTGCT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR GCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACTCTATGGGAAGCACTaGTTTGACCTCAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTLYGKH*FDLKEK
Trigger: TTTTTCCTTGAGGTCAAAGCAGTGCTTCCCATAGAG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACACATATTCTATGGATaGTCATTTACTACGAGTGAG +
Preference number: 2 (lower is better)
Translates to: THCEIHTACLHPKVINATHIFYG*SFTTSE
Trigger: CTCACTCGTAGTAAATGACCATCCATAGAATATGTG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACAGAAACGCTCCCAGTaGCCTTTAAATACCTATATA +
Preference number: 2 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTQKRSQ*PLNTYI
Trigger: TATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR CCA 72 bp GCTGCAGTAGGCAGTCCCTTCAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGATGGGTGTAGCCTAGCT +
Preference number: 3 (lower is better)
Translates to: AAVGSPFRPLPR*RRAAHDGCSLA
Trigger: AGCTAGGCTACACCCATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCTGAAGGGACTGCCTACTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGGGCAGAAGAGGGCTaGCACTCCAGAGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRAEEG*HSRAAG
Trigger: TCCTGCTGCTCTGGAGTGCAAGCCCTCTTCTGCCCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp CCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGGGAATCAGAAACGCTC +
Preference number: 3 (lower is better)
Translates to: PTTERASFRAEC*NAKCGRESETL
Trigger: GAGCGTTTCTGATTCCCGGCCACACTTTGCATTTCAACACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR CCA 72 bp TGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTaGCACGTTGCTAAGGATCACCTCACTCTACTGATT +
Preference number: 3 (lower is better)
Translates to: WSLTTAGTQEVS*HVAKDHLTLLI
Trigger: AATCAGTAGAGTGAGGTGATCCTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACTGCTTTCTAATCTATaGGCAGAAACAGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LVRPTTASAISTRVSGHQLLSNL*AETAQG
Trigger: GCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCAG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp AAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTaGGTGTTGAAATGCAAAGTGTGGCCGGGAATCAGA +
Preference number: 3 (lower is better)
Translates to: KRSNNRTSIFPG*VLKCKVWPGIR
Trigger: TCTGATTCCCGGCCACACTTTGCATTTCAACACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp CGAGAGTCAGTGGCCACCAAGGCTCTGATTCGGTCATaGAGTTTTCTTCCTGTCCACAGAAGAGGCAGCAAA +
Preference number: 3 (lower is better)
Translates to: RESVATKALIRS*SFLPVHRRGSK
Trigger: TTTGCTGCCTCTTCTGTGGACAGGAAGAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCACTGACTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp TGTCCTGGCACGTTGCTAAGGATCACCTCACTCTACTaGTTTGCCAGTATCAGTCCTTCCTCCTGCTCCCTT +
Preference number: 3 (lower is better)
Translates to: CPGTLLRITSLY*FASISPSSCSL
Trigger: AAGGGAGCAGGAGGAAGGACTGATACTGGCAAATCAGTAGAGTGAGGTGATCCTTAGCAACGTGCCAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAGGGCAGAAGAGGGCTaGCACTCCAGAGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHRAEEG*HSRAAG
Trigger: TCCTGCTGCTCTGGAGTGCAAGCCCTCTTCTGCCCT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCTGCTTTCTAATCTATaGGCAGAAACAGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLLSNL*AETAQG
Trigger: GCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCAG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp TTTTCCCACGTGATTCACCTTCTTACACGCAGGGAGTaGAAGAGGTCCAACAACCGAACGAGCATCTTTCCG +
Preference number: 3 (lower is better)
Translates to: FSHVIHLLTRRE*KRSNNRTSIFP
Trigger: CGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATCACGTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp TGCAATAAGCACGAGAGTCAGTGGCCACCAAGGCTCTaGTTCGGTCATGAAGTTTTCTTCCTGTCCACAGAA +
Preference number: 3 (lower is better)
Translates to: CNKHESQWPPRL*FGHEVFFLSTE
Trigger: TTCTGTGGACAGGAAGAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCACTGACTCTCGTGCTTATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR CCA 72 bp AAAGCAGTTTTAGAGAATGAGATTCGGGATCCCAAATaGTCCCTGACAACTGCAGGCACACAGGAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: KAVLENEIRDPK*SLTTAGTQEVS
Trigger: GGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTTGGGATCCCGAATCTCATTCTCTAAAACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp CTGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTaGTTCACCTTCTTACACGCAGGGAGTGAAAGAGGT +
Preference number: 3 (lower is better)
Translates to: LYPFTEKPLFPT*FTFLHAGSERG
Trigger: ACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp AGGTACACCAGGAAGGAAGAGGGGTTAAGCCTTAGATaGAATGAAATGCAGAGTTTGGCAAATGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RYTRKEEGLSLR*NEMQSLANGSW
Trigger: CCAGCTGCCATTTGCCAAACTCTGCATTTCATTTCATCTAAGGCTTAACCCCTCTTCCTTCCTGGTGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp CACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTaGAGCTCACCAAAGATTCACATATTCTATGGATGG +
Preference number: 3 (lower is better)
Translates to: HLNANAGLHSAH*SSPKIHIFYGW
Trigger: CCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR TCA 72 bp GATTCACATATTCTATGGATGGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACAATCAAATCCGAGGAG +
Preference number: 3 (lower is better)
Translates to: DSHILWMVIYYE*GKARKTIKSEE
Trigger: CTCCTCGGATTTGATTGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGACCATCCATAGAATATGTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR GCA 72 bp CATCTACGACGCATTGTGAGATTCACACAGCATGTCTaGACCCTAAAGTTATTAATGCAACACTGTGTCAAG +
Preference number: 3 (lower is better)
Translates to: HLRRIVRFTQHV*TLKLLMQHCVK
Trigger: CTTGACACAGTGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGTCGTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACAAATGGCATTGTTCTaGTCAATGACTAATTGCACA +
Preference number: 3 (lower is better)
Translates to: THCEIHTACLHPKVINATQMALF*SMTNCT
Trigger: TGTGCAATTAGTCATTGACAAGAACAATGCCATTTG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGGCTGGGCCGGGCCCTaGCGACCACCAGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAGWAGP*RPPARS
Trigger: AGAACGTGCTGGTGGTCGGCAGGGCCCGGCCCAGCC...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATCCCCAGGGGCGACGTaGCCCTCGGGCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRASPGAT*PSGTWM
Trigger: CATCCACGTGCCCGAGGGCCACGTCGCCCCTGGGGA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAGAGAAGGGAGACGCTaGCTCGCATGGCGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQREGRR*LAWRPR
Trigger: GCGGGGACGCCATGCGAGCCAGCGTCTCCCTTCTCT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392011.7
CDS-3UTR GCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACCTGACCGGCGGCTCTaGGTGGAGTCCGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAPDRRL*VESVCD
Trigger: GTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAGCACGTTCTTGGTGTaGACGAGGCCCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQSTFLV*TRPTLP
Trigger: GGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAAGCGAGGGAGGCCATTaGAGTTGGCCGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRASEGGH*SWPLGS
Trigger: GGATCCGAGCGGCCAACTCCAATGGCCTCCCTCGCT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCCACCAGCACGTTCTTaGTGTGCACGAGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQPPARS*CARGPP
Trigger: GGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCCCCACAGCTGCAGTTaGGCGGGACGGAGACATATG +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQPHSCS*AGRRHM
Trigger: CATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACTGGTGTCAGGAAGCTaGACAGCACCCCCGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRALVSGS*TAPPEL
Trigger: TAGCTCCGGGGGTGCTGTCCAGCTTCCTGACACCAG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTTCATGGAGATCTGCTaGGTCTCCCCAGGGGCGACG +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQFMEIC*VSPGAT
Trigger: CGTCGCCCCTGGGGAGACCCAGCAGATCTCCATGAA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAAGGGTAGAGGATGCTTaGGCCATGGGCCACGACAGC +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRARVEDA*AMGHDS
Trigger: GCTGTCGTGGCCCATGGCCCAAGCATCCTCTACCCT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCGATGTACCACTCCTTaGTCCACAGCTGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQRCTTP*STAGPG
Trigger: TCCGGGGCCAGCTGTGGACCAAGGAGTGGTACATCG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGATCACGAAGTCGTCCTaGTCCGCAGGGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQITKSS*SAGLKA
Trigger: CGCCTTCAGCCCTGCGGACCAGGACGACTTCGTGAT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTTCGGTGGTGTTGTGTaGGTACCACCACTCACCGCC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQFGGVV*VPPLTA
Trigger: GGCGGTGAGTGGTGGTACGCACACAACACCACCGAA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTCAGGCGGCTCACCTTaGCCAGCTTCAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQSGGSP*PASAGI
Trigger: GATTCCAGCTGAAGCTGGGCAAGGTGAGCCGCCTGA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACGGGACGGAGACATATaGCCCTTCCTTCGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRARDGDI*PFLRVA
Trigger: AGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCGGGACGGAGACATATaGCCCTTCCTTCGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQRDGDI*PFLRVA
Trigger: AGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACTGACCACCAGGCCCTaGCAGTCCATCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRALTTRP*QSIFSR
Trigger: CCTACTGAAGATGGACTGCCAGGGCCTGGTGGTCAG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGGGGTTGTCCCGCCTaGCCGGCGGCTCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRGCPA*PAALRG
Trigger: TCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQFRAEC*NAKCGR
Trigger: CCGGCCACACTTTGCATTTCAACACTCAGCCCGGAA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCCAGCAGCACCGAGGTaGTCAGCTCGGGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSPAAPR*SARGPS
Trigger: GCTCGGGCCCCGAGCTGAGCACCTCGGTGCTGCTGG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCCAGCAGCACCGAGGTaGTCAGCTCGGGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHPAAPR*SARGPS
Trigger: GCTCGGGCCCCGAGCTGAGCACCTCGGTGCTGCTGG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATGCCAGTGCTATTCGTaGTGGCTGAGCTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRACQCYS*WLSWIR
Trigger: CCGAATCCAGCTCAGCCACCACGAATAGCACTGGCA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAAGCTCGTTGGGGTTCTaGGAGGTGATGGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRASSLGF*EVMGKI
Trigger: GATCTTCCCCATCACCTCCCAGAACCCCAACGAGCT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTCTGGACACAAAACTaGGTGAGGATGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAVWTQN*VRMASW
Trigger: CCAGGAGGCCATCCTCACCCAGTTTTGTGTCCAGAC...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACGTGGAGTCCGTTTGTaGCTGGAAGCTCATCGAAGA +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRARGVRL*LEAHRR
Trigger: TCTTCGATGAGCTTCCAGTCACAAACGGACTCCACG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAGGCATAGATGTACGTaGGGAATTTGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQRHRCT*GICRAA
Trigger: TGCGGCCCTGCAAATTCCTCACGTACATCTATGCCT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTCTTCAGCTCCGCGGTaGCAGCAGGGCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSSSAPR*QQGTQG
Trigger: GCCCTGCGTGCCCTGCTGTCACCGCGGAGCTGAAGA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCGAAGATGTTGCCAGTaGTATTCGTGGTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQRRCCQ*YSWWLS
Trigger: GCTCAGCCACCACGAATAGCACTGGCAACATCTTCG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTGCTTCCCCCACAGCTaGAGGGCCACCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKCFPHS*RATGAG
Trigger: CCCTGCCCCGGTGGCCCTGCAGCTGTGGGGGAAGCA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATCCCCAGGGGCGACGTaGCCCTCGGGCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSPGAT*PSGTWM
Trigger: CATCCACGTGCCCGAGGGCCACGTCGCCCCTGGGGA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCCTGCTCGCTGGCTTTaGCCTCGTAATTCGTCATAT +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQPARWL*PRNSSY
Trigger: ATATGACGAATTACGAGGTCAAAGCCAGCGAGCAGG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGGCTTCCAGCGCTTGGTaGTGGGGTTTTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQASSAW*WGFSSC
Trigger: ACAAGATGAAAAACCCCATCACCAAGCGCTGGAAGC...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCCTGGTCCGCAGGGCTaGAGGCGGCTGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSPGPQG*RRLLSE
Trigger: TTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATGGCCACCAAGGCTCTaGTTCGGTCATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAWPPRL*FGHEVF
Trigger: GAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTATCCCAGCAGATGCTaGAGCTTCTGCCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQYPSRC*SFCLKQ
Trigger: TTGCTTGAGGCAGAAGCTTCAGCATCTGCTGGGATA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCAGGCCACGGACGCTaGACGACTCGGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHAGHGR*TTRSLS
Trigger: GGAGAGAGACCGAGTCGTGCAGCGTCCGTGGCCTGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCCAGCAGCACCGAGGTaGTCAGCTCGGGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRPAAPR*SARGPS
Trigger: GCTCGGGCCCCGAGCTGAGCACCTCGGTGCTGCTGG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAGAAACTCGACGATGTaGGAGCATCGGACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQRNSTM*EHRTWL
Trigger: AAGCCAAGTCCGATGCTCCCACATCGTCGAGTTTCT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTACCGTCTTGAAGGATaGGTGGATGTGTTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQYRLEG*VDVFRA
Trigger: GGCCCTAAACACATCCACCCATCCTTCAAGACGGTA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATCCTTGGTCCACAGCTaGCCCCGGAGCCTGACCCGC +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSLVHS*PRSLTR
Trigger: GCGGGTCAGGCTCCGGGGCCAGCTGTGGACCAAGGA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGACACAGGAAGTGTCCTaGCACGTTGCTAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQTQEVS*HVAKDH
Trigger: GTGATCCTTAGCAACGTGCCAGGACACTTCCTGTGT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCAATATGTTTCTTCCTaGTACAGCCGCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQQYVSS*YSRSLS
Trigger: CGAGAGGCTGCGGCTGTACCAGGAAGAAACATATTG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGATTAAAGCTCGTCTCTaGAAACCCTTCGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQIKARL*KPFAQV
Trigger: GACCTGAGCGAAGGGTTTTCAGAGACGAGCTTTAAT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGGGGTTGTCCCGCCTaGCCGGCGGCTCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLRGCPA*PAALRG
Trigger: TCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATAGGGGTTGTCCCGCCTaGCCGGCGGCTCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRGCPA*PAALRG
Trigger: TCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCCTCCAGCACAGGGCTaGTGCTGCAGGACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHPPAQG*CCRTCH
Trigger: GTGACAGGTCCTGCAGCATCAGCCCTGTGCTGGAGG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGGTGCAGCTCCTGGATaGCATCCCGGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSGAAPG*HPGSCP
Trigger: GGGACAGCTACCGGGATGTCATCCAGGAGCTGCACC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCCTGGTCCGCAGGGCTaGAGGCGGCTGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKPGPQG*RRLLSE
Trigger: TTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGGCTCTGATTCGGTCATaGAGTTTTCTTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQALIRS*SFLPVH
Trigger: GTGGACAGGAAGAAAACTTCATGACCGAATCAGAGC...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCGGGGCAGGGTTGGGTaGCTGGCGTGTGACCTCGCT +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRRGRVG*LACDLA
Trigger: AGCGAGGTCACACGCCAGGCACCCAACCCTGCCCCG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCACGAGGCCCACCCTaGCCTGGTAGTAGCCGATGT +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHARGPP*PGSSRC
Trigger: ACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCAGGGCCGCAGGATCTaGTCCAGCAGCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKQGRRI*SSSTEV
Trigger: CACCTCGGTGCTGCTGGAGCAGATCCTGCGGCCCTG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATTGTCAATGACTAATTaGACACTGGCAGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRALSMTN*TLAGAL
Trigger: TAGGGCCCCTGCCAGTGTGCAATTAGTCATTGACAA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAGAAATGGATTGGTCTaGACCCCATTCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQRNGLV*TPFQKG
Trigger: CCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGCAGGGTTGGGTGCCTaGCGTGTGACCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQAGLGA*RVTSLT
Trigger: GGTCAGCGAGGTCACACGCCAGGCACCCAACCCTGC...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCCACCAGCACGTTCTTaGTGTGCACGAGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSPPARS*CARGPP
Trigger: GGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGCTCCCGCCAGCGCTaGGCCACCTCTACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHSSRQR*ATSTAV
Trigger: CACGGCTGTAGAGGTGGCCCAGCGCTGGCGGGAGCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGAT +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRPLPR*RRAAHD
Trigger: ATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCTCCACGCAGCGGCATaGCTCTCGGATCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKLHAAA*LSDLTS
Trigger: GCTGGTGAGATCCGAGAGTCATGCCGCTGCGTGGAG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAATCAGGGTCCCCTCTaGCTTGCAGCGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKNQGPL*LAAREA
Trigger: GGCCTCCCTCGCTGCAAGTCAGAGGGGACCCTGATT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCATCCAGGCTGGGCATaGCGGGCACGTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHHPGWA*RARSHS
Trigger: TGAATGGGAACGTGCCCGTCATGCCCAGCCTGGATG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCATCCAGGCTGGGCATaGCGGGCACGTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSHPGWA*RARSHS
Trigger: TGAATGGGAACGTGCCCGTCATGCCCAGCCTGGATG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCGGGCACGTGGATGCTaGTGCTGGTGTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHRARGC*CWCQEA
Trigger: AGCTTCCTGACACCAGCATCAGCATCCACGTGCCCG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCCTGAACCCGCAGCGTaGAGTCAGAGAGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSPEPAA*SQRARW
Trigger: CCAACGAGCTCTCTGACTTCACGCTGCGGGTTCAGG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAGGGAGACGCAGCTCTaGCCGAGAAGCATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKRETQL*PRSMSG
Trigger: GCCGGACATGCTTCTCGGTCAGAGCTGCGTCTCCCT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGGGTCCCCTCTGACTTaGAGCGAGGGAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKGSPLT*SEGGHW
Trigger: CCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACCC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCCTGACCGGCGGCTCTaGGTGGAGTCCGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKPDRRL*VESVCD
Trigger: GTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCGCACCACTTTGGCCTaGTCGCTGGCTTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRTTLA*SLALTS
Trigger: CGAGGTCAAAGCCAGCGAGCAGGCCAAAGTGGTGCG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCTCACTCTACTGATTTaGCAGTATCAGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQLTLLI*QYQSFL
Trigger: GAGGAAGGACTGATACTGGCAAATCAGTAGAGTGAG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCAGCTCCAGCTCCTTaGCTACCTCGTCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHAAPAP*LPRLGC
Trigger: ACAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAATCCACAGTACTTTTaGGATTCAGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQNPQYF*DSAHPG
Trigger: GCCTGGATGAGCTGAATCCCAAAAGTACTGTGGATT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTGGCCCTCGGGCACGTaGATGCTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSWPSGT*MLMLVS
Trigger: TGACACCAGCATCAGCATCCACGTGCCCGAGGGCCA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTTGTGCAGCTGTGCCTaGACCGTGTCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSLCSCA*TVSPQL
Trigger: CAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCAGGGTTGGGTGCCTaGCGTGTGACCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRAGLGA*RVTSLT
Trigger: GGTCAGCGAGGTCACACGCCAGGCACCCAACCCTGC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGCTCCCGCCAGCGCTaGGCCACCTCTACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLSSRQR*ATSTAV
Trigger: CACGGCTGTAGAGGTGGCCCAGCGCTGGCGGGAGCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGCCGCTCGGATCCGCTaGGCCGCCATCTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLAARIR*AAISKL
Trigger: GAGTTTCGAGATGGCGGCTCAGCGGATCCGAGCGGC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCGGGCACGTGGATGCTaGTGCTGGTGTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKRARGC*CWCQEA
Trigger: AGCTTCCTGACACCAGCATCAGCATCCACGTGCCCG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGTGGGGTTCTGGGAGGTaGTGGGGAAGATCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRWGSGR*WGRSGG
Trigger: GCCGCCTGATCTTCCCCATCACCTCCCAGAACCCCA...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACCTGAACCCGCAGCGTaGAGTCAGAGAGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQPEPAA*SQRARW
Trigger: CCAACGAGCTCTCTGACTTCACGCTGCGGGTTCAGG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGGTTTCATCTAAACTATaGCTTCCTTCCGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQVSSKL*LPSEET
Trigger: TGTCTCCTCGGAAGGAAGTCATAGTTTAGATGAAAC...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGCAGGCCACGGACGCTaGACGACTCGGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHAGHGR*TTRSLS
Trigger: GGAGAGAGACCGAGTCGTGCAGCGTCCGTGGCCTGC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCAGGGCTCCAGGTTGTaGAGCTGTGCCTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRQGSRL*SCAWTV
Trigger: CACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCGCACCACTTTGGCCTaGTCGCTGGCTTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKRTTLA*SLALTS
Trigger: CGAGGTCAAAGCCAGCGAGCAGGCCAAAGTGGTGCG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGCACGAGGCCCACCCTaGCCTGGTAGTAGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHARGPP*PGSSRC
Trigger: ACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTGC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAGCACGTTCTTGGTGTaGACGAGGCCCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRSTFLV*TRPTLP
Trigger: GGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAGGGCTGAAGGCGGCTaGTCTCAGAACGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKRAEGG*SQNVQG
Trigger: TCCCTGGACGTTCTGAGAGCAGCCGCCTTCAGCCCT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCTCAAGCAAACACGCTaGGCGGCGGCATCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLKQTR*AAASTR
Trigger: CCGAGTGGATGCCGCCGCGCAGCGTGTTTGCTTGAG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAACCGGCGGCTCTGCGTaGAGTCCGTTTGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQTGGSA*SPFVTG
Trigger: TCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTGGCCCTCGGGCACGTaGATGCTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKWPSGT*MLMLVS
Trigger: TGACACCAGCATCAGCATCCACGTGCCCGAGGGCCA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTTCATGGAGATCTGCTaGGTCTCCCCAGGGGCGACG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKFMEIC*VSPGAT
Trigger: CGTCGCCCCTGGGGAGACCCAGCAGATCTCCATGAA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTCGCTCCTCAGGCACTaGAGGCCCACTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHSLLRH*RPTVLL
Trigger: CAAAAGCACAGTGGGCCTCCAGTGCCTGAGGAGCGA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAATCACGAAGTCGTCCTaGTCCGCAGGGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQITKSS*SAGLKA
Trigger: CGCCTTCAGCCCTGCGGACCAGGACGACTTCGTGAT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTGCTTTCTAATCTATTaGCAGAAACAGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQCFLIY*QKQLRA
Trigger: TGCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATCGAAGGTTATATGGTaGGATGATTGGCGAATTGTG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRASKVIW*DDWRIV
Trigger: CACAATTCGCCAATCATCCCACCATATAACCTTCGA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCTGAGCTGGATTCGGTaGAGGAGGATGTACCTGCGT +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLSWIR*RRMYLR
Trigger: ACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGCTATTCGTGGTGGCTaGGCTGGATTCGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSAIRGG*AGFGEG
Trigger: TCCTTCACCGAATCCAGCTCAGCCACCACGAATAGC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCTATTCGTGGTGGCTaGGCTGGATTCGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHAIRGG*AGFGEG
Trigger: TCCTTCACCGAATCCAGCTCAGCCACCACGAATAGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTTGCTCGGGGGCAGGTaGTTTCAAGCCGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSLLGGR*FQAGEE
Trigger: TTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAAATCCTCCCGGCTCTaGAATTGCTCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQKSSRL*NCSGAG
Trigger: ACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCGGGCACGTGGATGCTaGTGCTGGTGTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHRARGC*CWCQEA
Trigger: AGCTTCCTGACACCAGCATCAGCATCCACGTGCCCG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCCCCACAGCTGCAGTTaGGCGGGACGGAGACATATG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRPHSCS*AGRRHM
Trigger: CATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGCAACTTACCAAACTTaGGGCTGGACACCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQATYQT*GWTPGG
Trigger: ACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGC...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCCCGGCAGAAAAAGGTaGGCGGCAGGTTCACGTAGC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHPGRKR*AAGSRS
Trigger: GCTACGTGAACCTGCCGCTCACCTTTTTCTGCCGGG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTATCCCAAATGGTCCCTaGCAACTGCAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSIPNGP*QLQAHR
Trigger: CCTGTGTGCCTGCAGTTGTCAGGGACCATTTGGGAT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCAAAAGCCTCCAGCCTaGCCTGGAGGTAGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKQKPPA*PGGRAV
Trigger: AACGGCTCTACCTCCAGGTCAGGCTGGAGGCTTTTG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTTTCATGGAGATCTaGTGGGTCTCCCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRAFMEI*WVSPGA
Trigger: CGCCCCTGGGGAGACCCAGCAGATCTCCATGAAAGC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCAGGTTGTGCAGCTGTaGCTGGACCGTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHQVVQL*LDRVPT
Trigger: TGTGGGGACACGGTCCAGGCACAGCTGCACAACCTG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGACAAAACGAACTGGTaGTTCCCCCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSDKTNW*FPHSCR
Trigger: CCTGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTCAGGCGGCTCACCTTaGCCAGCTTCAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKSGGSP*PASAGI
Trigger: GATTCCAGCTGAAGCTGGGCAAGGTGAGCCGCCTGA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGCACGTTCTTGGTGTaGACGAGGCCCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLSTFLV*TRPTLP
Trigger: GGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATTGTCCAGGCCCAGGTaGAGCTCCTGGATGACATCC +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQLSRPR*SSWMTS
Trigger: GGATGTCATCCAGGAGCTGCACCTGGGCCTGGACAA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGAGTCCCAGTGAGGTaGTTCCAGCGCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRVPVR*FQRLVM
Trigger: CATCACCAAGCGCTGGAAGCACCTCACTGGGACTCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGGGCTGAAGGCGGCTaGTCTCAGAACGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHRAEGG*SQNVQG
Trigger: TCCCTGGACGTTCTGAGAGCAGCCGCCTTCAGCCCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTCAAGCAAACACGCTaGGCGGCGGCATCCACTCGG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHLKQTR*AAASTR
Trigger: CCGAGTGGATGCCGCCGCGCAGCGTGTTTGCTTGAG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGGCACCCAGAAATCCTaGTGTCTCTCCTCGCCAAAC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSGTQKS*CLSSPN
Trigger: GTTTGGCGAGGAGAGACAGCAGGATTTCTGGGTGCC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGGAGGCCATTGGAGTTaGCCGCTCGGATCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLGGHWS*PLGSAE
Trigger: CTCAGCGGATCCGAGCGGCCAACTCCAATGGCCTCC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGGAGGCCATTGGAGTTaGCCGCTCGGATCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHGGHWS*PLGSAE
Trigger: CTCAGCGGATCCGAGCGGCCAACTCCAATGGCCTCC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCAGCTCCAGCTCCTTaGCTACCTCGTCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRAAPAP*LPRLGC
Trigger: ACAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTGC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTGCCAGTGCTATTCGTaGTGGCTGAGCTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHCQCYS*WLSWIR
Trigger: CCGAATCCAGCTCAGCCACCACGAATAGCACTGGCA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGCATCGGACTTGGCTTaGAGGACGGAGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQASDLA*RTESSE
Trigger: CTCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGC...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTGGGAGCATCGGACTTaGCTTGGAGGACGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSWEHRT*LGGRRV
Trigger: AACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACGGGCCAGCTTCCTGTaGTTTAGCCAGGCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQRASFL*FSQAVR
Trigger: TCGAACTGCCTGGCTAAACCACAGGAAGCTGGCCCG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCGGGCCAGCTTCCTGTaGTTTAGCCAGGCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKRASFL*FSQAVR
Trigger: TCGAACTGCCTGGCTAAACCACAGGAAGCTGGCCCG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCTGGTGTCAGGAAGCTaGACAGCACCCCCGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLVSGS*TAPPEL
Trigger: TAGCTCCGGGGGTGCTGTCCAGCTTCCTGACACCAG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCCAGCAGGGCTTTCATaGAGATCTGCTGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKPAGLS*RSAGSP
Trigger: GGGAGACCCAGCAGATCTCCATGAAAGCCCTGCTGG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTTGTGCAGCTGTGCCTaGACCGTGTCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLCSCA*TVSPQL
Trigger: CAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGGGTAGAGGATGCTTaGGCCATGGGCCACGACAGC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHRVEDA*AMGHDS
Trigger: GCTGTCGTGGCCCATGGCCCAAGCATCCTCTACCCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAGGGTAGAGGATGCTTaGGCCATGGGCCACGACAGC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRRVEDA*AMGHDS
Trigger: GCTGTCGTGGCCCATGGCCCAAGCATCCTCTACCCT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGTCTGGACACAAAACTaGGTGAGGATGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHVWTQN*VRMASW
Trigger: CCAGGAGGCCATCCTCACCCAGTTTTGTGTCCAGAC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAAATCCTCCCGGCTCTaGAATTGCTCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRKSSRL*NCSGAG
Trigger: ACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTGGTCGTCCTTCACCTaGACCCGCAGCGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHWSSFT*TRSVKS
Trigger: TGACTTCACGCTGCGGGTTCAGGTGAAGGACGACCA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCGACTTCGTTCTTCTTaGGAAACCTCCTTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRLRSS*ETSFAR
Trigger: CCGGGCAAAGGAGGTTTCTCAAGAAGAACGAAGTCG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCCCGGCAGAAAAAGGTaGGCGGCAGGTTCACGTAGC +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHPGRKR*AAGSRS
Trigger: GCTACGTGAACCTGCCGCTCACCTTTTTCTGCCGGG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQFRAEC*NAKCGR
Trigger: CCGGCCACACTTTGCATTTCAACACTCAGCCCGGAA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGACTGTGTCAAGTTCCTaGTTTTATGTGAGTCACATT +
Preference number: 4 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQTVSSS*FYVSHI
Trigger: AATGTGACTCACATAAAATCAGGAACTTGACACAGT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAATCCCAAATGGTCCCTaGCAACTGCAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQIPNGP*QLQAHR
Trigger: CCTGTGTGCCTGCAGTTGTCAGGGACCATTTGGGAT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACCCTTCAGTTTCAAATaGAGGCCACGGACGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQPFSFK*RPRTLH
Trigger: GTGCAGCGTCCGTGGCCTGCATTTGAAACTGAAGGG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTTCGGTGGTGTTGTGTaGGTACCACCACTCACCGCC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHFGGVV*VPPLTA
Trigger: GGCGGTGAGTGGTGGTACGCACACAACACCACCGAA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCGAAGATGTTGCCAGTaGTATTCGTGGTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRRCCQ*YSWWLS
Trigger: GCTCAGCCACCACGAATAGCACTGGCAACATCTTCG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGCTTTCATGGAGATCTaGTGGGTCTCCCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHAFMEI*WVSPGA
Trigger: CGCCCCTGGGGAGACCCAGCAGATCTCCATGAAAGC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGTGGAAGGGTAGAGGATaGTTGGGCCATGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRWKGRG*LGHGPR
Trigger: TCGTGGCCCATGGCCCAAGCATCCTCTACCCTTCCA...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTGCTTCCCCCACAGCTaGAGGGCCACCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHCFPHS*RATGAG
Trigger: CCCTGCCCCGGTGGCCCTGCAGCTGTGGGGGAAGCA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGACAAAACGAACTGGTaGTTCCCCCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKDKTNW*FPHSCR
Trigger: CCTGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGGCTGGGCCGGGCCCTaGCGACCACCAGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHGWAGP*RPPARS
Trigger: AGAACGTGCTGGTGGTCGGCAGGGCCCGGCCCAGCC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCTCACTATCCAGCTCTaGCCGGCAGAAAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLTIQL*PAEKGE
Trigger: CTCACCTTTTTCTGCCGGGCAGAGCTGGATAGTGAG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAGAGTCCCAGTGAGGTaGTTCCAGCGCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQRVPVR*FQRLVM
Trigger: CATCACCAAGCGCTGGAAGCACCTCACTGGGACTCT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATTCACACAGCATGTCTaGACCCTAAAGTTATTAATG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAFTQHV*TLKLLM
Trigger: CATTAATAACTTTAGGGTGCAGACATGCTGTGTGAA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTATGGTCCCTGACAACTaGAGGCACACAGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSMVPDN*RHTGSV
Trigger: GACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCAT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTGTAGCCCATTTCGGTaGTGTTGTGTGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHCSPFR*CCVRTT
Trigger: GGTGGTACGCACACAACACCACCGAAATGGGCTACA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTCCCCAGGGGCGACGTaGCCCTCGGGCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHSPGAT*PSGTWM
Trigger: CATCCACGTGCCCGAGGGCCACGTCGCCCCTGGGGA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTATTCATGGAGATCTGCTaGGTCTCCCCAGGGGCGACG +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLFMEIC*VSPGAT
Trigger: CGTCGCCCCTGGGGAGACCCAGCAGATCTCCATGAA...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCGGGACGGAGACATATaGCCCTTCCTTCGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRRDGDI*PFLRVA
Trigger: AGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATAGGATGCTTGGGCCATaGGCCACGACAGCCACGTAC +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRMLGP*ATTATY
Trigger: GTACGTGGCTGTCGTGGCCCATGGCCCAAGCATCCT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGGATGCTTGGGCCATaGGCCACGACAGCCACGTAC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLRMLGP*ATTATY
Trigger: GTACGTGGCTGTCGTGGCCCATGGCCCAAGCATCCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGTCTGGACACAAAACTaGGTGAGGATGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKVWTQN*VRMASW
Trigger: CCAGGAGGCCATCCTCACCCAGTTTTGTGTCCAGAC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGGCACTTTTAGGGGGTaGCTGAGGAGTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKGTFRG*LRSLDT
Trigger: TGTGTCCAGACTCCTCAGCCACCCCCTAAAAGTGCC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTCCTTGGTCCACAGCTaGCCCCGGAGCCTGACCCGC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTSLVHS*PRSLTR
Trigger: GCGGGTCAGGCTCCGGGGCCAGCTGTGGACCAAGGA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCTGACCACCAGGCCCTaGCAGTCCATCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLTTRP*QSIFSR
Trigger: CCTACTGAAGATGGACTGCCAGGGCCTGGTGGTCAG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCTGACCACCAGGCCCTaGCAGTCCATCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRLTTRP*QSIFSR
Trigger: CCTACTGAAGATGGACTGCCAGGGCCTGGTGGTCAG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACACATATTCTATGGATaGTCATTTACTACGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAHIFYG*SFTTSE
Trigger: CTCACTCGTAGTAAATGACCATCCATAGAATATGTG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTTGGCAAATGGCAGCTaGCACCTCTGCACATCAGCA +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLANGS*HLCTSA
Trigger: TGCTGATGTGCAGAGGTGCCAGCTGCCATTTGCCAA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
3UTR CAA 72 bp ATGGCAGCTGGCACCTCTGCACATCAGCATAAGGCGTaGCTTGTGAGGCCAACCACAGCATCTGCAATAAGC +
Preference number: 4 (lower is better)
Translates to: MAAGTSAHQHKA*LVRPTTASAIS
Trigger: GCTTATTGCAGATGCTGTGGTTGGCCTCACAAGCAACGCCTTATGCTGATGTGCAGAGGTGCCAGCTGCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGTGATTTCAAGCCGGTaGAGAAACTCGACGATGTGG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSVISSR*RNSTMW
Trigger: CCACATCGTCGAGTTTCTTCACCGGCTTGAAATCAC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATAAATCCTCCCGGCTCTaGAATTGCTCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHKSSRL*NCSGAG
Trigger: ACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGGACACAAAACTGGGTaGGGATGGCCTCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHGHKTG*GWPPGR
Trigger: ACGACCAGGAGGCCATCCTCACCCAGTTTTGTGTCC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACGACTTCGTTCTTCTTaGGAAACCTCCTTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQRLRSS*ETSFAR
Trigger: CCGGGCAAAGGAGGTTTCTCAAGAAGAACGAAGTCG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCAAACGGGGACAGGATaGTTTTCCCGACTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHQTGTG*FSRLRS
Trigger: AGAACGAAGTCGGGAAAATCATCCTGTCCCCGTTTG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGCAACTTACCAAACTTaGGGCTGGACACCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLATYQT*GWTPGG
Trigger: ACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCCTGGTCCGCAGGGCTaGAGGCGGCTGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTPGPQG*RRLLSE
Trigger: TTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGTTCCGGGCTGAGTGTTaGAATGCAAAGTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRFRAEC*NAKCGR
Trigger: CCGGCCACACTTTGCATTTCAACACTCAGCCCGGAA...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTATCCCAGCAGATGCTaGAGCTTCTGCCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSYPSRC*SFCLKQ
Trigger: TTGCTTGAGGCAGAAGCTTCAGCATCTGCTGGGATA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTGGAAGGGTAGAGGATaGTTGGGCCATGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHWKGRG*LGHGPR
Trigger: TCGTGGCCCATGGCCCAAGCATCCTCTACCCTTCCA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATGCTTCCCCCACAGCTaGAGGGCCACCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATCFPHS*RATGAG
Trigger: CCCTGCCCCGGTGGCCCTGCAGCTGTGGGGGAAGCA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTCAGGCGGCTCACCTTaGCCAGCTTCAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHSGGSP*PASAGI
Trigger: GATTCCAGCTGAAGCTGGGCAAGGTGAGCCGCCTGA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTTGAGAAACCTCCTTTaGCCGGAAGGCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSLRNLL*PEGLMA
Trigger: TGCCATCAAGCCTTCCGGGCAAAGGAGGTTTCTCAA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCTCACTATCCAGCTCTaGCCGGCAGAAAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKLTIQL*PAEKGE
Trigger: CTCACCTTTTTCTGCCGGGCAGAGCTGGATAGTGAG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGCCAACCACAGCATCTaGAATAAGCACGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSANHSI*NKHESQ
Trigger: CTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGCATCGGACTTGGCTTaGAGGACGGAGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLASDLA*RTESSE
Trigger: CTCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCGGGCCAGCTTCCTGTaGTTTAGCCAGGCAGTTCGA +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRASFL*FSQAVR
Trigger: TCGAACTGCCTGGCTAAACCACAGGAAGCTGGCCCG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTCGCTCCTCAGGCACTaGAGGCCCACTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHSLLRH*RPTVLL
Trigger: CAAAAGCACAGTGGGCCTCCAGTGCCTGAGGAGCGA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGCAGGGTTGGGTGCCTaGCGTGTGACCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTAGLGA*RVTSLT
Trigger: GGTCAGCGAGGTCACACGCCAGGCACCCAACCCTGC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCTGGACAAAACGAACTaGTGCTTCCCCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRLDKTN*CFPHSC
Trigger: GCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCTGGACAAAACGAACTaGTGCTTCCCCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLDKTN*CFPHSC
Trigger: GCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGACACCGGGCGGTCCTaGAAAGTCGGGTACTTTGTA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHDTGRS*KVGYFV
Trigger: TACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAAGACGCTGGCTCGCATaGCGTCCCCGCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTRRWLA*RPRRLL
Trigger: CAGGAGCCGGCGGGGACGCCATGCGAGCCAGCGTCT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392011.7
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCAATATGTTTCTTCCTaGTACAGCCGCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSQYVSS*YSRSLS
Trigger: CGAGAGGCTGCGGCTGTACCAGGAAGAAACATATTG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGAATCAGGGTCCCCTCTaGCTTGCAGCGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTNQGPL*LAAREA
Trigger: GGCCTCCCTCGCTGCAAGTCAGAGGGGACCCTGATT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTATTAAAGCTCGTCTCTaGAAACCCTTCGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSIKARL*KPFAQV
Trigger: GACCTGAGCGAAGGGTTTTCAGAGACGAGCTTTAAT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTGGGGCAATAGTCCTTaGTCGCAATCACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHWGNSP*SQSLPL
Trigger: CAAAGGAAGTGATTGCGATCAAGGACTATTGCCCCA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGTCACTCAGTGTTaGGTTCCGGTAGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRAVTQC*VPVVQG
Trigger: CCCTTGAACTACCGGAACTCAACACTGAGTGACAGC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCGTGGAGTCCGTTTGTaGCTGGAAGCTCATCGAAGA +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRRGVRL*LEAHRR
Trigger: TCTTCGATGAGCTTCCAGTCACAAACGGACTCCACG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTGGTCACTACCGTCTTaGAGGATGGGTGGATGTGTT +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKWSLPS*RMGGCV
Trigger: AACACATCCACCCATCCTTCAAGACGGTAGTGACCA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTCTGATGGCTCCAGGTaGGTAAGAAGTCATACGCAG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKSDGSR*VRSHTQ
Trigger: CTGCGTATGACTTCTTACTCACCTGGAGCCATCAGA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATCTGATGGCTCCAGGTaGGTAAGAAGTCATACGCAG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSDGSR*VRSHTQ
Trigger: CTGCGTATGACTTCTTACTCACCTGGAGCCATCAGA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGGTGCAGCTCCTGGATaGCATCCCGGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTGAAPG*HPGSCP
Trigger: GGGACAGCTACCGGGATGTCATCCAGGAGCTGCACC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGCTTCCAGCGCTTGGTaGTGGGGTTTTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKASSAW*WGFSSC
Trigger: ACAAGATGAAAAACCCCATCACCAAGCGCTGGAAGC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCCACTTTTTCCCACGTaGTTCACCTTCTTACACGCA +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHPLFPT*FTFLHA
Trigger: TGCGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCTGTACCCGTTTACTaGAAAGCCACTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHAVPVY*KATFSH
Trigger: GTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACAGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCTCTGATTCGGTCATaGAGTTTTCTTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHALIRS*SFLPVH
Trigger: GTGGACAGGAAGAAAACTTCATGACCGAATCAGAGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTGGCCACCAAGGCTCTaGTTCGGTCATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKWPPRL*FGHEVF
Trigger: GAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGATAAGGCGTTGCTTGTaGGGCCAACCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRIRRCL*GQPQHL
Trigger: CAGATGCTGTGGTTGGCCTCACAAGCAACGCCTTAT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACCCTTCAGTTTCAAATaGAGGCCACGGACGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLPFSFK*RPRTLH
Trigger: GTGCAGCGTCCGTGGCCTGCATTTGAAACTGAAGGG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTTTGGGGCACAGTCATaGCCAAAAATGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHFGAQS*PKMVTT
Trigger: GGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACGGGGCAGGGTTGGGTaGCTGGCGTGTGACCTCGCT +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATRGRVG*LACDLA
Trigger: AGCGAGGTCACACGCCAGGCACCCAACCCTGCCCCG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATTGAGAAACCTCCTTTaGCCGGAAGGCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQLRNLL*PEGLMA
Trigger: TGCCATCAAGCCTTCCGGGCAAAGGAGGTTTCTCAA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCAGGGCCGCAGGATCTaGTCCAGCAGCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHQGRRI*SSSTEV
Trigger: CACCTCGGTGCTGCTGGAGCAGATCCTGCGGCCCTG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATATGGTCCCTGACAACTaGAGGCACACAGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHMVPDN*RHTGSV
Trigger: GACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCAT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCCTCGCCAAACCAAATaGAAAAGCCTCCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRPRQTK*KSLQPD
Trigger: GTCAGGCTGGAGGCTTTTGCATTTGGTTTGGCGAGG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGAAGCACCCTACTGTTaGGGTGCTTGTCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQEAPYC*GACLCF
Trigger: GAAACAGAGACAAGCACCCCAACAGTAGGGTGCTTC...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGAAGCACCCTACTGTTaGGGTGCTTGTCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKEAPYC*GACLCF
Trigger: GAAACAGAGACAAGCACCCCAACAGTAGGGTGCTTC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACTTCATATTTCTTCCTaGTACAGCCGCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQLHISS*YSRSLS
Trigger: CGAGAGGCTGCGGCTGTACCAGGAAGAAATATGAAG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344528.8
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCATTTCCGAAAGGTGTaGGGTTGTCTACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKHFRKV*GCLRAR
Trigger: CCTTGCTCGTAGACAACCCCACACCTTTCGGAAATG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTACCGTCTTGAAGGATaGGTGGATGTGTTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKYRLEG*VDVFRA
Trigger: GGCCCTAAACACATCCACCCATCCTTCAAGACGGTA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGACCAGGAGCGTCTTTaGGGCACAGTCATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLDQERL*GTVMPK
Trigger: TTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTTGCCCAGCTTCAGCTaGAATCCTCGCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLPSFS*NPRTTL
Trigger: CAAAGTGGTGCGAGGATTCCAGCTGAAGCTGGGCAA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGCTCGTTGGGGTTCTaGGAGGTGATGGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLSSLGF*EVMGKI
Trigger: GATCTTCCCCATCACCTCCCAGAACCCCAACGAGCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAGACACCGGGCGGTCCTaGAAAGTCGGGTACTTTGTA +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLDTGRS*KVGYFV
Trigger: TACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTC...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGGAGGGAGCAGGACCTaGGGCCTTCTCAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHGGSRT*GLLRKN
Trigger: ATTCTTTCTGAGAAGGCCCCAGGTCCTGCTCCCTCC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAACACAGGAAGTGTCCTaGCACGTTGCTAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQTQEVS*HVAKDH
Trigger: GTGATCCTTAGCAACGTGCCAGGACACTTCCTGTGT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGCCGCTCGGATCCGCTaGGCCGCCATCTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTAARIR*AAISKL
Trigger: GAGTTTCGAGATGGCGGCTCAGCGGATCCGAGCGGC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGTGATTTCAAGCCGGTaGAGAAACTCGACGATGTGG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRVISSR*RNSTMW
Trigger: CCACATCGTCGAGTTTCTTCACCGGCTTGAAATCAC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCCTCCAGCACAGGGCTaGTGCTGCAGGACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHPPAQG*CCRTCH
Trigger: GTGACAGGTCCTGCAGCATCAGCCCTGTGCTGGAGG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAAAACATACAGACCTTaGGATCCTGGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHKTYRP*DPGAWT
Trigger: TGTCCAGGCCCCAGGATCTCAAGGTCTGTATGTTTT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCCCGGCAGAAAAAGGTaGGCGGCAGGTTCACGTAGC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTPGRKR*AAGSRS
Trigger: GCTACGTGAACCTGCCGCTCACCTTTTTCTGCCGGG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGGTGCAGCTCCTGGATaGCATCCCGGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHGAAPG*HPGSCP
Trigger: GGGACAGCTACCGGGATGTCATCCAGGAGCTGCACC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAGCATCTTTCCGGGCTaGGTGTTGAAATGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKSIFPG*VLKCKV
Trigger: CACTTTGCATTTCAACACTCAGCCCGGAAAGATGCT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACTTACACGCAGGGAGTaGAAGAGGTCCAACAACCGA +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLLTRRE*KRSNNR
Trigger: TCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTGGCCACCAAGGCTCTaGTTCGGTCATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHWPPRL*FGHEVF
Trigger: GAAAACTTCATGACCGAATCAGAGCCTTGGTGGCCA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATATAAGGCGTTGCTTGTaGGGCCAACCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHIRRCL*GQPQHL
Trigger: CAGATGCTGTGGTTGGCCTCACAAGCAACGCCTTAT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTATCTACGACGCATTGTaGGATTCACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSIYDAL*DSHSMS
Trigger: AGACATGCTGTGTGAATCTCACAATGCGTCGTAGAT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGAAGGAGGATGTACCTaGGTCAAAAAGGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSEGGCT*VKKEQI
Trigger: GATTTGCTCCTTTTTGACGCAGGTACATCCTCCTTC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCAGGTTGTGCAGCTGTaGCTGGACCGTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTQVVQL*LDRVPT
Trigger: TGTGGGGACACGGTCCAGGCACAGCTGCACAACCTG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGCACGAGGCCCACCCTaGCCTGGTAGTAGCCGATGT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHARGPP*PGSSRC
Trigger: ACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTGC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACAGGGCCGCAGGATCTaGTCCAGCAGCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTQGRRI*SSSTEV
Trigger: CACCTCGGTGCTGCTGGAGCAGATCCTGCGGCCCTG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACTCACTATCCAGCTCTaGCCGGCAGAAAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLLTIQL*PAEKGE
Trigger: CTCACCTTTTTCTGCCGGGCAGAGCTGGATAGTGAG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGAGGGCTGAAGGCGGCTaGTCTCAGAACGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRAEGG*SQNVQG
Trigger: TCCCTGGACGTTCTGAGAGCAGCCGCCTTCAGCCCT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCCAACCACAGCATCTaGAATAAGCACGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRANHSI*NKHESQ
Trigger: CTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCTCACTCTACTGATTTaGCAGTATCAGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLTLLI*QYQSFL
Trigger: GAGGAAGGACTGATACTGGCAAATCAGTAGAGTGAG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAGCGAGGGAGGCCATTaGAGTTGGCCGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHSEGGH*SWPLGS
Trigger: GGATCCGAGCGGCCAACTCCAATGGCCTCCCTCGCT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCATTTCCGAAAGGTGTaGGGTTGTCTACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRHFRKV*GCLRAR
Trigger: CCTTGCTCGTAGACAACCCCACACCTTTCGGAAATG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTATGTAGCCCATTTCGGTaGTGTTGTGTGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLCSPFR*CCVRTT
Trigger: GGTGGTACGCACACAACACCACCGAAATGGGCTACA...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCTTGGCTACCTCGTCTaGGCTGTCTGGAAGATTATC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRLGYLV*AVWKII
Trigger: GATAATCTTCCAGACAGCCCAGACGAGGTAGCCAAG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTCATTCAGAAATGGATTaGTCTGGACCCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSHSEMD*SGPHSR
Trigger: TCTGGAATGGGGTCCAGACCAATCCATTTCTGAATG...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGTTCCCATTCAGAAATaGATTGGTCTGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHVPIQK*IGLDPI
Trigger: AATGGGGTCCAGACCAATCCATTTCTGAATGGGAAC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGAGTCCGTTTGTGACTaGAAGCTCATCGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSESVCD*KLIEDV
Trigger: AACATCTTCGATGAGCTTCCAGTCACAAACGGACTC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAGAAACTCGACGATGTaGGAGCATCGGACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRRNSTM*EHRTWL
Trigger: AAGCCAAGTCCGATGCTCCCACATCGTCGAGTTTCT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGAGCAAGTCCAGGTCGTaGCAAGACCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTSKSRS*QDRASF
Trigger: GAAGCTGGCCCGGTCTTGCCACGACCTGGACTTGCT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTACCGTCTTGAAGGATaGGTGGATGTGTTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHYRLEG*VDVFRA
Trigger: GGCCCTAAACACATCCACCCATCCTTCAAGACGGTA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCGATGTACCACTCCTTaGTCCACAGCTGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRCTTP*STAGPG
Trigger: TCCGGGGCCAGCTGTGGACCAAGGAGTGGTACATCG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCCACCAGCACGTTCTTaGTGTGCACGAGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHPPARS*CARGPP
Trigger: GGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATATTCGGGATCCCAAATaGTCCCTGACAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHIRDPK*SLTTAG
Trigger: GCCTGCAGTTGTCAGGGACCATTTGGGATCCCGAAT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACTCCACGCAGCGGCATaGCTCTCGGATCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTLHAAA*LSDLTS
Trigger: GCTGGTGAGATCCGAGAGTCATGCCGCTGCGTGGAG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGTGGGGCAATAGTCCTTaGTCGCAATCACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRWGNSP*SQSLPL
Trigger: CAAAGGAAGTGATTGCGATCAAGGACTATTGCCCCA...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGTGATTTCAAGCCGGTaGAGAAACTCGACGATGTGG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHVISSR*RNSTMW
Trigger: CCACATCGTCGAGTTTCTTCACCGGCTTGAAATCAC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACCTCCAGCACAGGGCTaGTGCTGCAGGACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTPPAQG*CCRTCH
Trigger: GTGACAGGTCCTGCAGCATCAGCCCTGTGCTGGAGG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTGGTCACTACCGTCTTaGAGGATGGGTGGATGTGTT +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHWSLPS*RMGGCV
Trigger: AACACATCCACCCATCCTTCAAGACGGTAGTGACCA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCCTGCTCGCTGGCTTTaGCCTCGTAATTCGTCATAT +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHPARWL*PRNSSY
Trigger: ATATGACGAATTACGAGGTCAAAGCCAGCGAGCAGG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATGGGGTTCTGGGAGGTaGTGGGGAAGATCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTWGSGR*WGRSGG
Trigger: GCCGCCTGATCTTCCCCATCACCTCCCAGAACCCCA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATGGGGTTCTGGGAGGTaGTGGGGAAGATCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATWGSGR*WGRSGG
Trigger: GCCGCCTGATCTTCCCCATCACCTCCCAGAACCCCA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACAAACGGGGACAGGATaGTTTTCCCGACTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLQTGTG*FSRLRS
Trigger: AGAACGAAGTCGGGAAAATCATCCTGTCCCCGTTTG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGCATCTTTCCGGGCTaGGTGTTGAAATGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHSIFPG*VLKCKV
Trigger: CACTTTGCATTTCAACACTCAGCCCGGAAAGATGCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGCTGTACCCGTTTACTaGAAAGCCACTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHAVPVY*KATFSH
Trigger: GTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACAGC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRVIYYE*GKARKT
Trigger: TGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGAC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCATTGTTCTTGTCAATaGCTAATTGCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHHCSCQ*LIAHWQ
Trigger: CTGCCAGTGTGCAATTAGTCATTGACAAGAACAATG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGATCACCTCACTCTACTaGTTTGCCAGTATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKITSLY*FASISP
Trigger: AGGACTGATACTGGCAAATCAGTAGAGTGAGGTGAT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTTCGGTGGTGTTGTGTaGGTACCACCACTCACCGCC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTFGGVV*VPPLTA
Trigger: GGCGGTGAGTGGTGGTACGCACACAACACCACCGAA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACCTGACCGGCGGCTCTaGGTGGAGTCCGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTPDRRL*VESVCD
Trigger: GTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCGGAGCTATCCAGCTTaGACACGATGTTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRSYPA*TRCLSP
Trigger: TGGAGACAAACATCGTGTGCAAGCTGGATAGCTCCG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACAGGGCTCCAGGTTGTaGAGCTGTGCCTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATQGSRL*SCAWTV
Trigger: CACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACGGGGCAGGGTTGGGTaGCTGGCGTGTGACCTCGCT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTRGRVG*LACDLA
Trigger: AGCGAGGTCACACGCCAGGCACCCAACCCTGCCCCG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCTCTATGGGAAGCACTaGTTTGACCTCAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLYGKH*FDLKEK
Trigger: TTTTTCCTTGAGGTCAAAGCAGTGCTTCCCATAGAG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGCCAACCACAGCATCTaGAATAAGCACGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHANHSI*NKHESQ
Trigger: CTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAGCGAGGGAGGCCATTaGAGTTGGCCGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATSEGGH*SWPLGS
Trigger: GGATCCGAGCGGCCAACTCCAATGGCCTCCCTCGCT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATACCGGCGGCTCTGCGTaGAGTCCGTTTGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHTGGSA*SPFVTG
Trigger: TCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAGCAAGTCCAGGTCGTaGCAAGACCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHSKSRS*QDRASF
Trigger: GAAGCTGGCCCGGTCTTGCCACGACCTGGACTTGCT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTCGCTCCTCAGGCACTaGAGGCCCACTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTSLLRH*RPTVLL
Trigger: CAAAAGCACAGTGGGCCTCCAGTGCCTGAGGAGCGA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATCCTTGGTCCACAGCTaGCCCCGGAGCCTGACCCGC +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTSLVHS*PRSLTR
Trigger: GCGGGTCAGGCTCCGGGGCCAGCTGTGGACCAAGGA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAAGCTCCCGCCAGCGCTaGGCCACCTCTACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTSSRQR*ATSTAV
Trigger: CACGGCTGTAGAGGTGGCCCAGCGCTGGCGGGAGCT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGAAAGCTATGTGATTaGCAACGAGCTGCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHRKLCD*QRAAVG
Trigger: GCCTACTGCAGCTCGTTGCCAATCACATAGCTTTCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAATATGGTGGGATGATTaGCGAATTGTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQIWWDD*RIVCPG
Trigger: ACCAGGACACACAATTCGCCAATCATCCCACCATAT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAGTGATAGATGGTCTCTaGGAGAAATTATGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQVIDGL*EKLWGG
Trigger: TCCACCCCATAATTTCTCCCAGAGACCATCTATCAC...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGCCGCTCGGATCCGCTaGGCCGCCATCTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTAARIR*AAISKL
Trigger: GAGTTTCGAGATGGCGGCTCAGCGGATCCGAGCGGC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACATCCAGGCTGGGCATaGCGGGCACGTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATHPGWA*RARSHS
Trigger: TGAATGGGAACGTGCCCGTCATGCCCAGCCTGGATG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTTGCTCGGGGGCAGGTaGTTTCAAGCCGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTLLGGR*FQAGEE
Trigger: TTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACCCCACAGCTGCAGTTaGGCGGGACGGAGACATATG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATPHSCS*AGRRHM
Trigger: CATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGGACACAAAACTGGGTaGGGATGGCCTCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHGHKTG*GWPPGR
Trigger: ACGACCAGGAGGCCATCCTCACCCAGTTTTGTGTCC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCAGAAACGCTCCCAGTaGCCTTTAAATACCTATATA +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHQKRSQ*PLNTYI
Trigger: TATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHVIYYE*GKARKT
Trigger: TGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGAC...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATATTATGGGGTGGAGTTaGGAAGCACAATCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHIMGWS*EAQSKV
Trigger: AACCTTCGATTGTGCTTCTCAACTCCACCCCATAAT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCGCAATCACTTCCTTTaGATTTCCGAAAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRNHFL*ISERCG
Trigger: CCCACACCTTTCGGAAATGCAAAGGAAGTGATTGCG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGAAGGAGGATGTACCTaGGTCAAAAAGGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHEGGCT*VKKEQI
Trigger: GATTTGCTCCTTTTTGACGCAGGTACATCCTCCTTC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGCTTTCATGGAGATCTaGTGGGTCTCCCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATAFMEI*WVSPGA
Trigger: CGCCCCTGGGGAGACCCAGCAGATCTCCATGAAAGC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGCAGCTCCAGCTCCTTaGCTACCTCGTCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATAAPAP*LPRLGC
Trigger: ACAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTGC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATAGAAATGGATTGGTCTaGACCCCATTCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRNGLV*TPFQKG
Trigger: CCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGAAATGGATTGGTCTaGACCCCATTCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLRNGLV*TPFQKG
Trigger: CCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCATTCAGAAATGGATTaGTCTGGACCCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHHSEMD*SGPHSR
Trigger: TCTGGAATGGGGTCCAGACCAATCCATTTCTGAATG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGTTCCCATTCAGAAATaGATTGGTCTGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHVPIQK*IGLDPI
Trigger: AATGGGGTCCAGACCAATCCATTTCTGAATGGGAAC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAATCCACAGTACTTTTaGGATTCAGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRNPQYF*DSAHPG
Trigger: GCCTGGATGAGCTGAATCCCAAAAGTACTGTGGATT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAACCGGCGGCTCTGCGTaGAGTCCGTTTGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATTGGSA*SPFVTG
Trigger: TCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTGGGAGCATCGGACTTaGCTTGGAGGACGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTWEHRT*LGGRRV
Trigger: AACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACTGGTGTCAGGAAGCTaGACAGCACCCCCGGAGCTA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATLVSGS*TAPPEL
Trigger: TAGCTCCGGGGGTGCTGTCCAGCTTCCTGACACCAG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATTGTGCAGCTGTGCCTaGACCGTGTCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTLCSCA*TVSPQL
Trigger: CAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAGGATGCTTGGGCCATaGGCCACGACAGCCACGTAC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATRMLGP*ATTATY
Trigger: GTACGTGGCTGTCGTGGCCCATGGCCCAAGCATCCT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGGCACTTTTAGGGGGTaGCTGAGGAGTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTGTFRG*LRSLDT
Trigger: TGTGTCCAGACTCCTCAGCCACCCCCTAAAAGTGCC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGACACCGGGCGGTCCTaGAAAGTCGGGTACTTTGTA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTDTGRS*KVGYFV
Trigger: TACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTTGAAATGCAAAGTGTaGCCGGGAATCAGAAACGCT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHLKCKV*PGIRNA
Trigger: AGCGTTTCTGATTCCCGGCCACACTTTGCATTTCAA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTGCTTTCTAATCTATTaGCAGAAACAGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKCFLIY*QKQLRA
Trigger: TGCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATATATGGTGGGATGATTaGCGAATTGTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHIWWDD*RIVCPG
Trigger: ACCAGGACACACAATTCGCCAATCATCCCACCATAT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTCGAAGGTTATATGGTaGGATGATTGGCGAATTGTG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKSKVIW*DDWRIV
Trigger: CACAATTCGCCAATCATCCCACCATATAACCTTCGA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCTGAGCTGGATTCGGTaGAGGAGGATGTACCTGCGT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHLSWIR*RRMYLR
Trigger: ACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCGTGGAGTCCGTTTGTaGCTGGAAGCTCATCGAAGA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRGVRL*LEAHRR
Trigger: TCTTCGATGAGCTTCCAGTCACAAACGGACTCCACG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATGGTCGTCCTTCACCTaGACCCGCAGCGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTWSSFT*TRSVKS
Trigger: TGACTTCACGCTGCGGGTTCAGGTGAAGGACGACCA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCATTGTTCTTGTCAATaGCTAATTGCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHHCSCQ*LIAHWQ
Trigger: CTGCCAGTGTGCAATTAGTCATTGACAAGAACAATG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGGGTTAAGCCTTAGATaGAATGAAATGCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKGLSLR*NEMQSL
Trigger: CAAACTCTGCATTTCATTTCATCTAAGGCTTAACCC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAGCAGTTTTAGAGAATaGGATTCGGGATCCCAAATG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRSSFRE*DSGSQM
Trigger: CATTTGGGATCCCGAATCTCATTCTCTAAAACTGCT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGCAGTTTTAGAGAATaGGATTCGGGATCCCAAATG +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHSSFRE*DSGSQM
Trigger: CATTTGGGATCCCGAATCTCATTCTCTAAAACTGCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTTGGTCTTCAGTATCTaGATAAGTAGCTATACAACG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSLVFSI*ISSYTT
Trigger: CGTTGTATAGCTACTTATTCAGATACTGAAGACCAA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATGGAAGGGTAGAGGATaGTTGGGCCATGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTWKGRG*LGHGPR
Trigger: TCGTGGCCCATGGCCCAAGCATCCTCTACCCTTCCA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATTGTCCAGGCCCAGGTaGAGCTCCTGGATGACATCC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTLSRPR*SSWMTS
Trigger: GGATGTCATCCAGGAGCTGCACCTGGGCCTGGACAA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTTCACACAGCATGTCTaGACCCTAAAGTTATTAATG +
Preference number: 4 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHFTQHV*TLKLLM
Trigger: CATTAATAACTTTAGGGTGCAGACATGCTGTGTGAA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACTCACTCTACTGATTTaGCAGTATCAGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLLTLLI*QYQSFL
Trigger: GAGGAAGGACTGATACTGGCAAATCAGTAGAGTGAG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTGGGAGCATCGGACTTaGCTTGGAGGACGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHWEHRT*LGGRRV
Trigger: AACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACCAGCAGGGCTTTCATaGAGATCTGCTGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATPAGLS*RSAGSP
Trigger: GGGAGACCCAGCAGATCTCCATGAAAGCCCTGCTGG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACCAGCAGGGCTTTCATaGAGATCTGCTGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTPAGLS*RSAGSP
Trigger: GGGAGACCCAGCAGATCTCCATGAAAGCCCTGCTGG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGGCACTTTTAGGGGGTaGCTGAGGAGTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHGTFRG*LRSLDT
Trigger: TGTGTCCAGACTCCTCAGCCACCCCCTAAAAGTGCC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAAGGCCTCTCCCTCGATaGAGGAGGGCGGCGCATGAT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTRPLPR*RRAAHD
Trigger: ATCATGCGCCGCCCTCCTCCATCGAGGGAGAGGCCT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTTGAAATGCAAAGTGTaGCCGGGAATCAGAAACGCT +
Preference number: 4 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHLKCKV*PGIRNA
Trigger: AGCGTTTCTGATTCCCGGCCACACTTTGCATTTCAA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAAGACTGTCAACTCATaGCTGCTTTCTAATCTATTG +
Preference number: 4 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSKTVNS*LLSNLL
Trigger: CAATAGATTAGAAAGCAGCCATGAGTTGACAGTCTT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGTCGAAGGTTATATGGTaGGATGATTGGCGAATTGTG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRSKVIW*DDWRIV
Trigger: CACAATTCGCCAATCATCCCACCATATAACCTTCGA...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACAATCGAAGGTTATATaGTGGGATGATTGGCGAATT +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQQSKVI*WDDWRI
Trigger: AATTCGCCAATCATCCCACCATATAACCTTCGATTG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGCTGTCACTCAGTGTTaGGTTCCGGTAGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHAVTQC*VPVVQG
Trigger: CCCTTGAACTACCGGAACTCAACACTGAGTGACAGC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACTGAGCTGGATTCGGTaGAGGAGGATGTACCTGCGT +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATLSWIR*RRMYLR
Trigger: ACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGCTATTCGTGGTGGCTaGGCTGGATTCGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATAIRGG*AGFGEG
Trigger: TCCTTCACCGAATCCAGCTCAGCCACCACGAATAGC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATTGCTCGGGGGCAGGTaGTTTCAAGCCGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATLLGGR*FQAGEE
Trigger: TTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCCTGCTCGCTGGCTTTaGCCTCGTAATTCGTCATAT +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTPARWL*PRNSSY
Trigger: ATATGACGAATTACGAGGTCAAAGCCAGCGAGCAGG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACCTGAACCCGCAGCGTaGAGTCAGAGAGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTPEPAA*SQRARW
Trigger: CCAACGAGCTCTCTGACTTCACGCTGCGGGTTCAGG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGGGTTAAGCCTTAGATaGAATGAAATGCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRGLSLR*NEMQSL
Trigger: CAAACTCTGCATTTCATTTCATCTAAGGCTTAACCC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGACTGTGTCAAGTTCCTaGTTTTATGTGAGTCACATT +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKTVSSS*FYVSHI
Trigger: AATGTGACTCACATAAAATCAGGAACTTGACACAGT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAATCCCAAATGGTCCCTaGCAACTGCAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTIPNGP*QLQAHR
Trigger: CCTGTGTGCCTGCAGTTGTCAGGGACCATTTGGGAT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCGAAGATGTTGCCAGTaGTATTCGTGGTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHRRCCQ*YSWWLS
Trigger: GCTCAGCCACCACGAATAGCACTGGCAACATCTTCG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACGCACCACTTTGGCCTaGTCGCTGGCTTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTRTTLA*SLALTS
Trigger: CGAGGTCAAAGCCAGCGAGCAGGCCAAAGTGGTGCG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTGCGGGACTTCACTCTaGCCACTGAAGCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHCGTSL*PLKLTK
Trigger: TTTGGTGAGCTTCAGTGGGCAGAGTGAAGTCCCGCA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGTTCACACAGCATGTCTaGACCCTAAAGTTATTAATG +
Preference number: 4 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKFTQHV*TLKLLM
Trigger: CATTAATAACTTTAGGGTGCAGACATGCTGTGTGAA...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATATGGTCCCTGACAACTaGAGGCACACAGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHMVPDN*RHTGSV
Trigger: GACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCAT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCATTTCCGAAAGGTGTaGGGTTGTCTACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTHFRKV*GCLRAR
Trigger: CCTTGCTCGTAGACAACCCCACACCTTTCGGAAATG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGAGAAACTCGACGATGTaGGAGCATCGGACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRNSTM*EHRTWL
Trigger: AAGCCAAGTCCGATGCTCCCACATCGTCGAGTTTCT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAAGCAAGTCCAGGTCGTaGCAAGACCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTSKSRS*QDRASF
Trigger: GAAGCTGGCCCGGTCTTGCCACGACCTGGACTTGCT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATGGCCCTCGGGCACGTaGATGCTGATGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTWPSGT*MLMLVS
Trigger: TGACACCAGCATCAGCATCCACGTGCCCGAGGGCCA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGACCAGGAGCGTCTTTaGGGCACAGTCATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTDQERL*GTVMPK
Trigger: TTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGACCAGGAGCGTCTTTaGGGCACAGTCATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATDQERL*GTVMPK
Trigger: TTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTTGCCCAGCTTCAGCTaGAATCCTCGCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHLPSFS*NPRTTL
Trigger: CAAAGTGGTGCGAGGATTCCAGCTGAAGCTGGGCAA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAAGACTGTCAACTCATaGCTGCTTTCTAATCTATTG +
Preference number: 4 (lower is better)
Translates to: LVRPTTASAISTRVSGHQKTVNS*LLSNLL
Trigger: CAATAGATTAGAAAGCAGCCATGAGTTGACAGTCTT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCGAATTGTGTGTCCTaGTTCTTGCAGCATAAAATA +
Preference number: 4 (lower is better)
Translates to: FLHAGSERGPTTERASFRANCVS*FLQHKI
Trigger: TATTTTATGCTGCAAGAACCAGGACACACAATTCGC...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGCGAATTGTGTGTCCTaGTTCTTGCAGCATAAAATA +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHANCVS*FLQHKI
Trigger: TATTTTATGCTGCAAGAACCAGGACACACAATTCGC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATCAATCGAAGGTTATATaGTGGGATGATTGGCGAATT +
Preference number: 4 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHQSKVI*WDDWRI
Trigger: AATTCGCCAATCATCCCACCATATAACCTTCGATTG...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTGGGGCAATAGTCCTTaGTCGCAATCACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTWGNSP*SQSLPL
Trigger: CAAAGGAAGTGATTGCGATCAAGGACTATTGCCCCA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGCTGTCACTCAGTGTTaGGTTCCGGTAGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTAVTQC*VPVVQG
Trigger: CCCTTGAACTACCGGAACTCAACACTGAGTGACAGC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTGGTCACTACCGTCTTaGAGGATGGGTGGATGTGTT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHWSLPS*RMGGCV
Trigger: AACACATCCACCCATCCTTCAAGACGGTAGTGACCA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAAAACATACAGACCTTaGGATCCTGGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHKTYRP*DPGAWT
Trigger: TGTCCAGGCCCCAGGATCTCAAGGTCTGTATGTTTT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGGACACAAAACTGGGTaGGGATGGCCTCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTGHKTG*GWPPGR
Trigger: ACGACCAGGAGGCCATCCTCACCCAGTTTTGTGTCC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACGACTTCGTTCTTCTTaGGAAACCTCCTTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTRLRSS*ETSFAR
Trigger: CCGGGCAAAGGAGGTTTCTCAAGAAGAACGAAGTCG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCAAACGGGGACAGGATaGTTTTCCCGACTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHQTGTG*FSRLRS
Trigger: AGAACGAAGTCGGGAAAATCATCCTGTCCCCGTTTG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGCAACTTACCAAACTTaGGGCTGGACACCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTATYQT*GWTPGG
Trigger: ACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAGGCATAGATGTACGTaGGGAATTTGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATRHRCT*GICRAA
Trigger: TGCGGCCCTGCAAATTCCTCACGTACATCTATGCCT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACAGAAACGCTCCCAGTaGCCTTTAAATACCTATATA +
Preference number: 4 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLQKRSQ*PLNTYI
Trigger: TATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACTTACACGCAGGGAGTaGAAGAGGTCCAACAACCGA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATLTRRE*KRSNNR
Trigger: TCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAATAAGGCGTTGCTTGTaGGGCCAACCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATIRRCL*GQPQHL
Trigger: CAGATGCTGTGGTTGGCCTCACAAGCAACGCCTTAT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCGCAATCACTTCCTTTaGATTTCCGAAAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRNHFL*ISERCG
Trigger: CCCACACCTTTCGGAAATGCAAAGGAAGTGATTGCG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGCTCATCGAAGATGTTaGCAGTGCTATTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHAHRRC*QCYSWW
Trigger: CCACCACGAATAGCACTGGCAACATCTTCGATGAGC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCGGAGCTATCCAGCTTaGACACGATGTTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHRSYPA*TRCLSP
Trigger: TGGAGACAAACATCGTGTGCAAGCTGGATAGCTCCG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTTTGGGGCACAGTCATaGCCAAAAATGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTFGAQS*PKMVTT
Trigger: GGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATGCGGGACTTCACTCTaGCCACTGAAGCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATCGTSL*PLKLTK
Trigger: TTTGGTGAGCTTCAGTGGGCAGAGTGAAGTCCCGCA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTTGTCAATGACTAATTaGACACTGGCAGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTLSMTN*TLAGAL
Trigger: TAGGGCCCCTGCCAGTGTGCAATTAGTCATTGACAA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATGTAGCCCATTTCGGTaGTGTTGTGTGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATCSPFR*CCVRTT
Trigger: GGTGGTACGCACACAACACCACCGAAATGGGCTACA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCTTGGCTACCTCGTCTaGGCTGTCTGGAAGATTATC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHLGYLV*AVWKII
Trigger: GATAATCTTCCAGACAGCCCAGACGAGGTAGCCAAG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGCATCGGACTTGGCTTaGAGGACGGAGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTASDLA*RTESSE
Trigger: CTCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGAGAAAGCTATGTGATTaGCAACGAGCTGCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRKLCD*QRAAVG
Trigger: GCCTACTGCAGCTCGTTGCCAATCACATAGCTTTCT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATTGGCAAATGGCAGCTaGCACCTCTGCACATCAGCA +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTLANGS*HLCTSA
Trigger: TGCTGATGTGCAGAGGTGCCAGCTGCCATTTGCCAA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAATTCGGGATCCCAAATaGTCCCTGACAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTIRDPK*SLTTAG
Trigger: GCCTGCAGTTGTCAGGGACCATTTGGGATCCCGAAT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATCTGATGGCTCCAGGTaGGTAAGAAGTCATACGCAG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATSDGSR*VRSHTQ
Trigger: CTGCGTATGACTTCTTACTCACCTGGAGCCATCAGA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAGCATCTTTCCGGGCTaGGTGTTGAAATGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHSIFPG*VLKCKV
Trigger: CACTTTGCATTTCAACACTCAGCCCGGAAAGATGCT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGCTCATCGAAGATGTTaGCAGTGCTATTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATAHRRC*QCYSWW
Trigger: CCACCACGAATAGCACTGGCAACATCTTCGATGAGC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTTTGGGGCACAGTCATaGCCAAAAATGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHFGAQS*PKMVTT
Trigger: GGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGACAAAACGAACTGGTaGTTCCCCCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTDKTNW*FPHSCR
Trigger: CCTGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCATTCAGAAATGGATTaGTCTGGACCCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTHSEMD*SGPHSR
Trigger: TCTGGAATGGGGTCCAGACCAATCCATTTCTGAATG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATGCCAGTGCTATTCGTaGTGGCTGAGCTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTCQCYS*WLSWIR
Trigger: CCGAATCCAGCTCAGCCACCACGAATAGCACTGGCA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGATATGGTGGGATGATTaGCGAATTGTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTIWWDD*RIVCPG
Trigger: ACCAGGACACACAATTCGCCAATCATCCCACCATAT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAAGGCATAGATGTACGTaGGGAATTTGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTRHRCT*GICRAA
Trigger: TGCGGCCCTGCAAATTCCTCACGTACATCTATGCCT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACTTACACGCAGGGAGTaGAAGAGGTCCAACAACCGA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTLTRRE*KRSNNR
Trigger: TCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACCACTTTTTCCCACGTaGTTCACCTTCTTACACGCA +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTPLFPT*FTFLHA
Trigger: TGCGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGCTCTGATTCGGTCATaGAGTTTTCTTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTALIRS*SFLPVH
Trigger: GTGGACAGGAAGAAAACTTCATGACCGAATCAGAGC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGTTTCATCTAAACTATaGCTTCCTTCCGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTVSSKL*LPSEET
Trigger: TGTCTCCTCGGAAGGAAGTCATAGTTTAGATGAAAC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATATCTACGACGCATTGTaGGATTCACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHIYDAL*DSHSMS
Trigger: AGACATGCTGTGTGAATCTCACAATGCGTCGTAGAT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATATCACCTCACTCTACTaGTTTGCCAGTATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHITSLY*FASISP
Trigger: AGGACTGATACTGGCAAATCAGTAGAGTGAGGTGAT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATATTATGGGGTGGAGTTaGGAAGCACAATCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHIMGWS*EAQSKV
Trigger: AACCTTCGATTGTGCTTCTCAACTCCACCCCATAAT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACATTGTCAATGACTAATTaGACACTGGCAGGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATLSMTN*TLAGAL
Trigger: TAGGGCCCCTGCCAGTGTGCAATTAGTCATTGACAA...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAACCCTACTGTTGGGGTaGTTGTCTCTGTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTTLLLG*LSLFQL
Trigger: CAACTGAAACAGAGACAAGCACCCCAACAGTAGGGT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAGAAAGCTATGTGATTaGCAACGAGCTGCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATRKLCD*QRAAVG
Trigger: GCCTACTGCAGCTCGTTGCCAATCACATAGCTTTCT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATTGGCAAATGGCAGCTaGCACCTCTGCACATCAGCA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTLANGS*HLCTSA
Trigger: TGCTGATGTGCAGAGGTGCCAGCTGCCATTTGCCAA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAATTCGGGATCCCAAATaGTCCCTGACAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTIRDPK*SLTTAG
Trigger: GCCTGCAGTTGTCAGGGACCATTTGGGATCCCGAAT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAAAAACATACAGACCTTaGGATCCTGGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTKTYRP*DPGAWT
Trigger: TGTCCAGGCCCCAGGATCTCAAGGTCTGTATGTTTT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGCTTCCAGCGCTTGGTaGTGGGGTTTTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTASSAW*WGFSSC
Trigger: ACAAGATGAAAAACCCCATCACCAAGCGCTGGAAGC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCATTGTTCTTGTCAATaGCTAATTGCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHHCSCQ*LIAHWQ
Trigger: CTGCCAGTGTGCAATTAGTCATTGACAAGAACAATG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAATCACCTCACTCTACTaGTTTGCCAGTATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATITSLY*FASISP
Trigger: AGGACTGATACTGGCAAATCAGTAGAGTGAGGTGAT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAGCAGTTTTAGAGAATaGGATTCGGGATCCCAAATG +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHSSFRE*DSGSQM
Trigger: CATTTGGGATCCCGAATCTCATTCTCTAAAACTGCT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAATTATGGGGTGGAGTTaGGAAGCACAATCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATIMGWS*EAQSKV
Trigger: AACCTTCGATTGTGCTTCTCAACTCCACCCCATAAT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGAAGGAGGATGTACCTaGGTCAAAAAGGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTEGGCT*VKKEQI
Trigger: GATTTGCTCCTTTTTGACGCAGGTACATCCTCCTTC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGCTCATCGAAGATGTTaGCAGTGCTATTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTAHRRC*QCYSWW
Trigger: CCACCACGAATAGCACTGGCAACATCTTCGATGAGC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR GCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCTCTATGGGAAGCACTaGTTTGACCTCAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHLYGKH*FDLKEK
Trigger: TTTTTCCTTGAGGTCAAAGCAGTGCTTCCCATAGAG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAATCCACAGTACTTTTaGGATTCAGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATNPQYF*DSAHPG
Trigger: GCCTGGATGAGCTGAATCCCAAAAGTACTGTGGATT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGAGTCCGTTTGTGACTaGAAGCTCATCGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATESVCD*KLIEDV
Trigger: AACATCTTCGATGAGCTTCCAGTCACAAACGGACTC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGAGTCCGTTTGTGACTaGAAGCTCATCGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTESVCD*KLIEDV
Trigger: AACATCTTCGATGAGCTTCCAGTCACAAACGGACTC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATTGCTTTCTAATCTATTaGCAGAAACAGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHCFLIY*QKQLRA
Trigger: TGCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCA...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAACACAGGAAGTGTCCTaGCACGTTGCTAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTTQEVS*HVAKDH
Trigger: GTGATCCTTAGCAACGTGCCAGGACACTTCCTGTGT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGTGATAGATGGTCTCTaGGAGAAATTATGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTVIDGL*EKLWGG
Trigger: TCCACCCCATAATTTCTCCCAGAGACCATCTATCAC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACCACTTTTTCCCACGTaGTTCACCTTCTTACACGCA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTPLFPT*FTFLHA
Trigger: TGCGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGTCATTTACTACGAGTaGGGCAAAGCACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTVIYYE*GKARKT
Trigger: TGTCTTCCGTGCTTTGCCTCACTCGTAGTAAATGAC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTTGGTCTTCAGTATCTaGATAAGTAGCTATACAACG +
Preference number: 4 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTLVFSI*ISSYTT
Trigger: CGTTGTATAGCTACTTATTCAGATACTGAAGACCAA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATGCGAATTGTGTGTCCTaGTTCTTGCAGCATAAAATA +
Preference number: 4 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHANCVS*FLQHKI
Trigger: TATTTTATGCTGCAAGAACCAGGACACACAATTCGC...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACAGAAACGCTCCCAGTaGCCTTTAAATACCTATATA +
Preference number: 4 (lower is better)
Translates to: THCEIHTACLHPKVINATQKRSQ*PLNTYI
Trigger: TATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAGGGTTAAGCCTTAGATaGAATGAAATGCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTGLSLR*NEMQSL
Trigger: CAAACTCTGCATTTCATTTCATCTAAGGCTTAACCC...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAATCTACGACGCATTGTaGGATTCACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTIYDAL*DSHSMS
Trigger: AGACATGCTGTGTGAATCTCACAATGCGTCGTAGAT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGTTCCCATTCAGAAATaGATTGGTCTGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTVPIQK*IGLDPI
Trigger: AATGGGGTCCAGACCAATCCATTTCTGAATGGGAAC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGTTTCATCTAAACTATaGCTTCCTTCCGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTVSSKL*LPSEET
Trigger: TGTCTCCTCGGAAGGAAGTCATAGTTTAGATGAAAC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACATTGGTCTTCAGTATCTaGATAAGTAGCTATACAACG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTLVFSI*ISSYTT
Trigger: CGTTGTATAGCTACTTATTCAGATACTGAAGACCAA...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CCA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACACATATTCTATGGATaGTCATTTACTACGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RESETLPVTFKYLYTSLTHIFYG*SFTTSE
Trigger: CTCACTCGTAGTAAATGACCATCCATAGAATATGTG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR TCA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAACTGTGTCAAGTTCCTaGTTTTATGTGAGTCACATT +
Preference number: 4 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTTVSSS*FYVSHI
Trigger: AATGTGACTCACATAAAATCAGGAACTTGACACAGT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp GGAGAGAAGGGAGACGCTGGCTCGCATGGCGTCCCCGCCGGCTCCTaGGGCTCCGCTCGTCGGCCAGCGGCTCGGCCCAGCCGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: GEKGDAGSHGVPAGS*GSARRPAARPSRGR
Trigger: GCGCCCCCGGCTGGGCCGAGCCGCTGGCCGACGAGCGGAGCCTCAGGAGCCGGCGGGGACGCCATGCGAGCCAGCGTCTCCCTTCTCTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392011.7
CDS TCA 90 bp TCCTCACAGGAGGGATCTGGCTCGCATGGCGTCCCCGCCGGCTCCTaGGGCTCCGCTCGTCGGCCAGCGGCTCGGCCCAGCCGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: SSQEGSGSHGVPAGS*GSARRPAARPSRGR
Trigger: GCGCCCCCGGCTGGGCCGAGCCGCTGGCCGACGAGCGGAGCCTCAGGAGCCGGCGGGGACGCCATGCGAGCCAGATCCCTCCTGTGAGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS CCA 90 bp GCTGAGTCCGGCGGCTCTCCCGCGGCTCCTCCCGCGCGGCATCTCTaGGCGCCCGACACCCGGTCAGGGCCAGCTGGGCCTGTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: AESGGSPAAPPARHL*APDTRSGPAGPVPN
Trigger: GTTGGGGACAGGCCCAGCTGGCCCTGACCGGGTGTCGGGCGCCCAGAGATGCCGCGCGGGAGGAGCCGCGGGAGAGCCGCCGGACTCAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS TCA 90 bp GGCAATATGTTTCTTCCTGGCTCGCATGGCGTCCCCGCCGGCTCCTaGGGCTCCGCTCGTCGGCCAGCGGCTCGGCCCAGCCGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: GNMFLPGSHGVPAGS*GSARRPAARPSRGR
Trigger: GCGCCCCCGGCTGGGCCGAGCCGCTGGCCGACGAGCGGAGCCTCAGGAGCCGGCGGGGACGCCATGCGAGCCAGGAAGAAACATATTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416021.5
CDS TCA 90 bp AGGCCCCGGGCTAGGAGCCGCGGGACCCAGGGTTGGGGTCCCAACTaGCACCCGCCCGTGCCGCGGAGCGGGCTTCTCGGTAAACATCGC +
Preference number: 5 (lower is better)
Translates to: RPRARSRGTQGWGPN*HPPVPRSGLLGKHR
Trigger: GCGATGTTTACCGAGAAGCCCGCTCCGCGGCACGGGCGGGTGTCAGTTGGGACCCCAACCCTGGGTCCCGCGGCTCCTAGCCCGGGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS CCA 90 bp GCTCCAGCAGCACCGAGGTGCTCAGCTCGGGGCCCGAGCACAGGCTaGGCCGGGCCCTGCCGACCACCAGCACGTTCTTGGTGTGCACGA +
Preference number: 5 (lower is better)
Translates to: APAAPRCSARGPSTG*AGPCRPPARSWCAR
Trigger: TCGTGCACACCAAGAACGTGCTGGTGGTCGGCAGGGCCCGGCCCAGCCTGTGCTCGGGCCCCGAGCTGAGCACCTCGGTGCTGCTGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp CAGCCGGTCCCCGCCCGCGGGCCGCCGGCGCTGTCACCTCGCGGCTaGTCGGTCACCCGATCGCCAAGCCAGAAACCGGAGTTTTCAATT +
Preference number: 5 (lower is better)
Translates to: QPVPARGPPALSPRG*SVTRSPSQKPEFSI
Trigger: AATTGAAAACTCCGGTTTCTGGCTTGGCGATCGGGTGACCGAGCAGCCGCGAGGTGACAGCGCCGGCGGCCCGCGGGCGGGGACCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS CCA 90 bp CCGAGCACAGGCTGGGCCGGGCCCTGCCGACCACCAGCACGTTCTTaGTGTGCACGAGGCCCACCCTGCCCTGGTAGTAGCCGATGTACC +
Preference number: 5 (lower is better)
Translates to: PSTGWAGPCRPPARS*CARGPPCPGSSRCT
Trigger: GGTACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGGTCGGCAGGGCCCGGCCCAGCCTGTGCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp GGAGCCGCGGGACCCAGGGTTGGGGTCCCAACTGACACCCGCCCGTaGCGCGGAGCGGGCTTCTCGGTAAACATCGCTCAGAGAACAACG +
Preference number: 5 (lower is better)
Translates to: GAAGPRVGVPTDTRP*RGAGFSVNIAQRTT
Trigger: CGTTGTTCTCTGAGCGATGTTTACCGAGAAGCCCGCTCCGCGGCACGGGCGGGTGTCAGTTGGGACCCCAACCCTGGGTCCCGCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS TCA 90 bp CCACCCGCTCGGGCTCACTATCCAGCTCTGCCCGGCAGAAAAAGGTaGGCGGCAGGTTCACGTAGCCCAGGGCGTCAGCGAAGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: PPARAHYPALPGRKR*AAGSRSPGRQRRSA
Trigger: GGCGCTCCTTCGCTGACGCCCTGGGCTACGTGAACCTGCCGCTCACCTTTTTCTGCCGGGCAGAGCTGGATAGTGAGCCCGAGCGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp GGGCCATGGGCCACGACAGCCACGTACATACAGGGCTCCAGGTTGTaGAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAGTTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: GPWATTATYIQGSRL*SCAWTVSPQLQLSG
Trigger: CCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGTGGCTGTCGTGGCCCATGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGGTTTGTCTCCACGGCTaGGGTCTGGCCCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQVCLHG*GLAPTR
Trigger: CCTGGTTGGGGCCAGACCCAAGCCGTGGAGACAAAC...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAACCACCAGCACGTTCTaGGTGTGCACGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRATTSTF*VCTRPT
Trigger: GGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGGT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp GGCCACGACAGCCACGTACATACAGGGCTCCAGGTTGTGCAGCTGTaGCTGGACCGTGTCCCCACAGCTGCAGTTGAGCGGGACGGAGAC +
Preference number: 5 (lower is better)
Translates to: GHDSHVHTGLQVVQL*LDRVPTAAVERDGD
Trigger: GTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGTGGCTGTCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp CCCTGCCGACCACCAGCACGTTCTTGGTGTGCACGAGGCCCACCCTaGCCTGGTAGTAGCCGATGTACCACTCCTTGGTCCACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: PCRPPARSWCARGPP*PGSSRCTTPWSTAG
Trigger: GCCAGCTGTGGACCAAGGAGTGGTACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGGTCGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp TGTTCTTTTTCAGATCTCATCGATCCATCAGGCTCCACGACCCTCTaGTCGCTGAGTCCGGCGGCTCTCCCGCGGCTCCTCCCGCGCGGC +
Preference number: 5 (lower is better)
Translates to: CSFSDLIDPSGSTTL*SLSPAALPRLLPRG
Trigger: GCCGCGCGGGAGGAGCCGCGGGAGAGCCGCCGGACTCAGCGAGCAGAGGGTCGTGGAGCCTGATGGATCGATGAGATCTGAAAAAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS CCA 90 bp AGCAGGGCTTTCATGGAGATCTGCTGGGTCTCCCCAGGGGCGACGTaGCCCTCGGGCACGTGGATGCTGATGCTGGTGTCAGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRAFMEICWVSPGAT*PSGTWMLMLVSGSW
Trigger: CCAGCTTCCTGACACCAGCATCAGCATCCACGTGCCCGAGGGCCACGTCGCCCCTGGGGAGACCCAGCAGATCTCCATGAAAGCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp GGCGACGTGAGAACAATCCCTCCTTTGTGTACACACCACCCAACCTaGGCTCTGTCCCGCGGCTGCTGGGGTGGGGGAGCTGCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: GDVRTIPPLCTHHPT*ALSRGCWGGGAASL
Trigger: CAGGCTAGCAGCTCCCCCACCCCAGCAGCCGCGGGACAGAGCCCAGGTTGGGTGGTGTGTACACAAAGGAGGGATTGTTCTCACGTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS CCA 90 bp TGCATGCTGGCTGCCGGGGGAGGCCACCCTCAGTTCCTTGCCACATaGCCTCTCTATATGGCAGCCTGCTCCACCACAGCCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CMLAAGGGHPQFLAT*PLYMAACSTTASRG
Trigger: TCCCCTGCTGGCTGTGGTGGAGCAGGCTGCCATATAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGATACAGGGCTCCAGGTaGTGCAGCTGTGCCTGGACC +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQIQGSR*CSCAWT
Trigger: GGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTAT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp TCACCAGCCTCTTGCCCTTCAGTTTCAAATGCAGGCCACGGACGCTaGACGACTCGGTCTCTCTCCACAGGGCCAGGGCTCCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SPASCPSVSNAGHGR*TTRSLSTGPGLPSR
Trigger: CCTGGAGGGGAGCCCTGGCCCTGTGGAGAGAGACCGAGTCGTGCAGCGTCCGTGGCCTGCATTTGAAACTGAAGGGCAAGAGGCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000409212.5
ENST00000444916.5
ENST00000489601.1
CDS CCA 90 bp CTGGACCGTGTCCCCACAGCTGCAGTTGAGCGGGACGGAGACATATaGCCCTTCCTTCGAGTCGCTCCTCAGGCACTGGAGGCCCACTGT +
Preference number: 5 (lower is better)
Translates to: LDRVPTAAVERDGDI*PFLRVAPQALEAHC
Trigger: ACAGTGGGCCTCCAGTGCCTGAGGAGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp GAGCAGCAGGAGGGGAGGGGACCCATTCAAATCACGAAGTCGTCCTaGTCCGCAGGGCTGAAGGCGGCTGCTCTCAGAACGTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EQQEGRGPIQITKSS*SAGLKAAALRTSRE
Trigger: CTCCCTGGACGTTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGGACGACTTCGTGATTTGAATGGGTCCCCTCCCCTCCTGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGCCACCGGGGCAGGGTaGGGTGCCTGGCGTGTGACC +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSATGAG*GAWRVT
Trigger: GGTCACACGCCAGGCACCCAACCCTGCCCCGGTGGC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCCACCGGGGCAGGGTaGGGTGCCTGGCGTGTGACC +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHATGAG*GAWRVT
Trigger: GGTCACACGCCAGGCACCCAACCCTGCCCCGGTGGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp CCAGGTTGTGCAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAGTTaGGCGGGACGGAGACATATGGCCCTTCCTTCGAGTCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PGCAAVPGPCPHSCS*AGRRHMALPSSRSS
Trigger: TGAGGAGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp CAGGACACGGCCTTCTGTCCAGGAGAGAAGGGAGACGCCTACTCCTaGATCAGGGTGACTCGGCAGTCTGGCCCAGGCCAGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: QDTAFCPGEKGDAYS*IRVTRQSGPGQSSC
Trigger: ACAGGAGCTCTGGCCTGGGCCAGACTGCCGAGTCACCCTGATTCAGGAGTAGGCGTCTCCCTTCTCTCCTGGACAGAAGGCCGTGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454947.1
CDS TCA 90 bp GGGAGACGCGCAGCAGTGGGGTCTCCTCCTCAAGTCACACGGCGCTaGCATCACTACAGAGCCGGCGCCTTTGAGAGCAGAACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GRRAAVGSPPQVTRR*HHYRAGAFESRTSQ
Trigger: TTGGCTGGTTCTGCTCTCAAAGGCGCCGGCTCTGTAGTGATGTCAGCGCCGTGTGACTTGAGGAGGAGACCCCACTGCTGCGCGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS GCA 90 bp CTTCAACTGCATGCTGGCTGCCGGGGGAGGCCACCCTCAGTTCCTTaGCACATGGCCTCTCTATATGGCAGCCTGCTCCACCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: LQLHAGCRGRPPSVP*HMASLYGSLLHHSQ
Trigger: CTGGCTGTGGTGGAGCAGGCTGCCATATAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGCAGTTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CCA 90 bp TCAGGTCAATCAGGGTCCCCTCTGACTTGCAGCGAGGGAGGCCATTaGAGTTGGCCGCTCGGATCCGCTGAGCCGCCATCTCGAAACTCG +
Preference number: 5 (lower is better)
Translates to: SGQSGSPLTCSEGGH*SWPLGSAEPPSRNS
Trigger: CGAGTTTCGAGATGGCGGCTCAGCGGATCCGAGCGGCCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACCCTGATTGACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000416021.5
ENST00000444916.5
ENST00000446904.5
ENST00000454947.1
CDS CCA 90 bp CCTTTGTGTACACACCACCCAACCTGGGCTCTGTCCCGCGGCTGCTaGGGTGGGGGAGCTGCTAGCCTGGCTTCTTGGAAGAGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: PLCTHHPTWALSRGC*GGGAASLASWKSEN
Trigger: GTTCTCACTCTTCCAAGAAGCCAGGCTAGCAGCTCCCCCACCCCAGCAGCCGCGGGACAGAGCCCAGGTTGGGTGGTGTGTACACAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS CCA 90 bp CCGGGGGAGGCCACCCTCAGTTCCTTGCCACATGGCCTCTCTATATaGCAGCCTGCTCCACCACAGCCAGCAGGGGAGACCATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: PGEATLSSLPHGLSI*QPAPPQPAGETICC
Trigger: ACAACAGATGGTCTCCCCTGCTGGCTGTGGTGGAGCAGGCTGCCATATAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACCCATTTCGGTGGTGTaGTGTGCGTACCACCACTCA +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAPISVV*CAYHHS
Trigger: TGAGTGGTGGTACGCACACAACACCACCGAAATGGG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGGCTTGCACACGATGTTaGTCTCCACGGCTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQACTRC*SPRLGS
Trigger: AGACCCAAGCCGTGGAGACAAACATCGTGTGCAAGC...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCCGGAGCTATCCAGCTaGCACACGATGTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQPELSS*HTMFVS
Trigger: GGAGACAAACATCGTGTGCAAGCTGGATAGCTCCGG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAAAGTCAGAGAGCTCGTaGGGGTTCTGGGAGGTGATG +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAKSESS*GFWEVM
Trigger: CATCACCTCCCAGAACCCCAACGAGCTCTCTGACTT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACTTGAGAAACCTCCTTaGCCCGGAAGGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRALEKPP*PGRLDG
Trigger: GCCATCAAGCCTTCCGGGCAAAGGAGGTTTCTCAAG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp CCTTCTGTCCAGGAGAGAAGGGAGACGCCTACTCCTGAATCAGGGTaGCTCGGCAGTCTGGCCCAGGCCAGAGCTCCTGTGGAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: PSVQERRETPTPESG*LGSLAQARAPVEKA
Trigger: CGCTTTCTCCACAGGAGCTCTGGCCTGGGCCAGACTGCCGAGTCACCCTGATTCAGGAGTAGGCGTCTCCCTTCTCTCCTGGACAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454947.1
CDS CCA 90 bp ACGTGGCCCTCGGGCACGTGGATGCTGATGCTGGTGTCAGGAAGCTaGACAGCACCCCCGGAGCTATCCAGCTTGCACACGATGTTTGTC +
Preference number: 5 (lower is better)
Translates to: TWPSGTWMLMLVSGS*TAPPELSSLHTMFV
Trigger: GACAAACATCGTGTGCAAGCTGGATAGCTCCGGGGGTGCTGTCCAGCTTCCTGACACCAGCATCAGCATCCACGTGCCCGAGGGCCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp AGAGAAGGGAGACGCCTACTCCTGAATCAGGGTGACTCGGCAGTCTaGCCCAGGCCAGAGCTCCTGTGGAGAAAGCGACAGGCTGCATGG +
Preference number: 5 (lower is better)
Translates to: REGRRLLLNQGDSAV*PRPELLWRKRQAAW
Trigger: CCATGCAGCCTGTCGCTTTCTCCACAGGAGCTCTGGCCTGGGCCAGACTGCCGAGTCACCCTGATTCAGGAGTAGGCGTCTCCCTTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454947.1
CDS CCA 90 bp CTGTCCCGCGGCTGCTGGGGTGGGGGAGCTGCTAGCCTGGCTTCTTaGAAGAGTGAGAACGTTCCACGGGTGGCAACAGAAAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: LSRGCWGGGAASLAS*KSENVPRVATESGF
Trigger: GAATCCACTTTCTGTTGCCACCCGTGGAACGTTCTCACTCTTCCAAGAAGCCAGGCTAGCAGCTCCCCCACCCCAGCAGCCGCGGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAAAGTGTCCTGGCACGTaGCTAAGGATCACCTCACTC +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAKCPGT*LRITSL
Trigger: GAGTGAGGTGATCCTTAGCAACGTGCCAGGACACTT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp TGTTCCTCCACGCAGCGGCATGACTCTCGGATCTCACCAGCCTCTTaGCCTTCAGTTTCAAATGCAGGCCACGGACGCTGCACGACTCGG +
Preference number: 5 (lower is better)
Translates to: CSSTQRHDSRISPAS*PSVSNAGHGRCTTR
Trigger: CCGAGTCGTGCAGCGTCCGTGGCCTGCATTTGAAACTGAAGGGCAAGAGGCTGGTGAGATCCGAGAGTCATGCCGCTGCGTGGAGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000409212.5
ENST00000444916.5
ENST00000489601.1
CDS GCA 90 bp GCGCTTGCTTCTGAAGAAGGGGTTGTCCCGCCTGACCGGCGGCTCTaGGTGGAGTCCGTTTGTGACTGGAAGCTCATCGAAGATGTTGCC +
Preference number: 5 (lower is better)
Translates to: ALASEEGVVPPDRRL*VESVCDWKLIEDVA
Trigger: GGCAACATCTTCGATGAGCTTCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCTTCTTCAGAAGCAAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp CAGTTACTTGTGGCCATGGGACTGAGGCTTCAACTGCATGCTGGCTaGCGGGGGAGGCCACCCTCAGTTCCTTGCCACATGGCCTCTCTA +
Preference number: 5 (lower is better)
Translates to: QLLVAMGLRLQLHAG*RGRPPSVPCHMASL
Trigger: TAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGCAGTTGAAGCCTCAGTCCCATGGCCACAAGTAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CCA 90 bp ACGACAGCCACGTACATACAGGGCTCCAGGTTGTGCAGCTGTGCCTaGACCGTGTCCCCACAGCTGCAGTTGAGCGGGACGGAGACATAT +
Preference number: 5 (lower is better)
Translates to: TTATYIQGSRLCSCA*TVSPQLQLSGTETY
Trigger: ATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGTGGCTGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACCATTCAGAAATGGATaGGTCTGGACCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAPFRNG*VWTPFQ
Trigger: CTGGAATGGGGTCCAGACCAATCCATTTCTGAATGG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCCATTCAGAAATGGATaGGTCTGGACCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQPFRNG*VWTPFQ
Trigger: CTGGAATGGGGTCCAGACCAATCCATTTCTGAATGG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCTTCTGAAGAAGGGGTaGTCCCGCCTGACCGGCGGC +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLLKKG*SRLTGG
Trigger: GCCGCCGGTCAGGCGGGACAACCCCTTCTTCAGAAG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAATGGTCACTACCGTCTaGAAGGATGGGTGGATGTGT +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAMVTTV*KDGWMC
Trigger: ACACATCCACCCATCCTTCAAGACGGTAGTGACCAT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGTGCCGCACCACAGTCTaGAGCAACTTACCAAACTTG +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQCRTTV*SNLPNL
Trigger: CAAGTTTGGTAAGTTGCTCAAGACTGTGGTGCGGCA...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp TGGACACAAAACTGGGTGAGGATGGCCTCCTGGTCGTCCTTCACCTaGACCCGCAGCGTGAAGTCAGAGAGCTCGTTGGGGTTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: WTQNWVRMASWSSFT*TRSVKSESSLGFWE
Trigger: CTCCCAGAACCCCAACGAGCTCTCTGACTTCACGCTGCGGGTTCAGGTGAAGGACGACCAGGAGGCCATCCTCACCCAGTTTTGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp GGAGGGGACCCATTCAAATCACGAAGTCGTCCTGGTCCGCAGGGCTaGAGGCGGCTGCTCTCAGAACGTCCAGGGAGTTCACCAAGATCA +
Preference number: 5 (lower is better)
Translates to: GGDPFKSRSRPGPQG*RRLLSERPGSSPRS
Trigger: TGATCTTGGTGAACTCCCTGGACGTTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGGACGACTTCGTGATTTGAATGGGTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp GAGCTGCTAGCCTGGCTTCTTGGAAGAGTGAGAACGTTCCACGGGTaGCAACAGAAAGTGGATTCGCTGGTACAGCCGCAGCCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: ELLAWLLGRVRTFHG*QQKVDSLVQPQPLA
Trigger: GGCGAGAGGCTGCGGCTGTACCAGCGAATCCACTTTCTGTTGCCACCCGTGGAACGTTCTCACTCTTCCAAGAAGCCAGGCTAGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACAGCGAGGGAGGCCATaGGAGTTGGCCGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQQRGRP*ELAARI
Trigger: GATCCGAGCGGCCAACTCCAATGGCCTCCCTCGCTG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGCAGCTCCAGCTCCTaGGCTACCTCGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSSSSSS*ATSSGL
Trigger: CAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTGCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACCGATGTACCACTCCTaGGTCCACAGCTGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQPMYHS*VHSWPR
Trigger: CCGGGGCCAGCTGTGGACCAAGGAGTGGTACATCGG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACTGCTTTCTAATCTATaGGCAGAAACAGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRALLSNL*AETAQG
Trigger: GCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCAG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCTGCTTTCTAATCTATaGGCAGAAACAGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQLLSNL*AETAQG
Trigger: GCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCAG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGCCTCACTCTACTGATTaGCCAGTATCAGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQPHSTD*PVSVLP
Trigger: AGGAAGGACTGATACTGGCAAATCAGTAGAGTGAGG...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp CCTCCCGGCTCTGAAATTGCTCGGGGGCAGGTGATTTCAAGCCGGTaGAGAAACTCGACGATGTGGGAGCATCGGACTTGGCTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PPGSEIARGQVISSR*RNSTMWEHRTWLGG
Trigger: TCCTCCAAGCCAAGTCCGATGCTCCCACATCGTCGAGTTTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAATTTCAGAGCCGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp TGTCCGGCACCCAGAAATCCTGCTGTCTCTCCTCGCCAAACCAAATaGAAAAGCCTCCAGCCTGACCTGGAGGTAGAGCCGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: CPAPRNPAVSPRQTK*KSLQPDLEVEPFLQ
Trigger: CTGGAGGAACGGCTCTACCTCCAGGTCAGGCTGGAGGCTTTTGCATTTGGTTTGGCGAGGAGAGACAGCAGGATTTCTGGGTGCCGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS CCA 90 bp TTGCTTCTGAAGAAGGGGTTGTCCCGCCTGACCGGCGGCTCTGCGTaGAGTCCGTTTGTGACTGGAAGCTCATCGAAGATGTTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LLLKKGLSRLTGGSA*SPFVTGSSSKMLPV
Trigger: CACTGGCAACATCTTCGATGAGCTTCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCTTCTTCAGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp AGGGTTGGGTGCCTGGCGTGTGACCTCGCTGACCAGGAGCGTCTTTaGGGCACAGTCATGCCCAAAAATGGTCACTACCGTCTTGAAGGA +
Preference number: 5 (lower is better)
Translates to: RVGCLACDLADQERL*GTVMPKNGHYRLEG
Trigger: TCCTTCAAGACGGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTCAGCGAGGTCACACGCCAGGCACCCAACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTGTGGGAGCATCGGACTaGGCTTGGAGGACGGAGAGT +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSVGASD*AWRTES
Trigger: ACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCAC...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGTGGGAGCATCGGACTaGGCTTGGAGGACGGAGAGT +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHVGASD*AWRTES
Trigger: ACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCAC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGGTTTGTCTCCACGGCTaGGGTCTGGCCCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKVCLHG*GLAPTR
Trigger: CCTGGTTGGGGCCAGACCCAAGCCGTGGAGACAAAC...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTCCAGGTTGCTCAGCTaGACCTCCAGCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHSRLLS*TSSTGL
Trigger: CAGCCCTGTGCTGGAGGTCAAGCTGAGCAACCTGGA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTTCCAGGTTGCTCAGCTaGACCTCCAGCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSSRLLS*TSSTGL
Trigger: CAGCCCTGTGCTGGAGGTCAAGCTGAGCAACCTGGA...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAATTATGGGGTGGAGTaGAGAAGCACAATCGAAGGT +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQNYGVE*RSTIEG
Trigger: ACCTTCGATTGTGCTTCTCAACTCCACCCCATAATT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp GAGCCGTTCCTCCAGAGGTTCAGCATGTTCCTCCACGCAGCGGCATaGCTCTCGGATCTCACCAGCCTCTTGCCCTTCAGTTTCAAATGC +
Preference number: 5 (lower is better)
Translates to: EPFLQRFSMFLHAAA*LSDLTSLLPFSFKC
Trigger: GCATTTGAAACTGAAGGGCAAGAGGCTGGTGAGATCCGAGAGTCATGCCGCTGCGTGGAGGAACATGCTGAACCTCTGGAGGAACGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000409212.5
ENST00000444916.5
ENST00000489601.1
CDS-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGCAGCTCCAGCTCCTaGGCTACCTCGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHSSSSS*ATSSGL
Trigger: CAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTGCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGCATCGGACTTGGCTaGGAGGACGGAGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSSIGLG*EDGEFR
Trigger: TCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATCCAGGTTGCTCAGCTaGACCTCCAGCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSRLLS*TSSTGL
Trigger: CAGCCCTGTGCTGGAGGTCAAGCTGAGCAACCTGGA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACAATCCTCGCACCACTTaGGCCTGCTCGCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHNPRTT*ACSLAL
Trigger: CAAAGCCAGCGAGCAGGCCAAAGTGGTGCGAGGATT...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACAGCAACTTACCAAACTaGAGGCTGGACACCGGGCGG +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHSNLPN*RLDTGR
Trigger: CCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGCT...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCCGATGTACCACTCCTaGGTCCACAGCTGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHPMYHS*VHSWPR
Trigger: CCGGGGCCAGCTGTGGACCAAGGAGTGGTACATCGG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAGAAGGACTTCCGTTCTTaGTTCTCAGTGTTGTTACAG +
Preference number: 5 (lower is better)
Translates to: SAVTAGHAGQKRACTPEQKDFRS*FSVLLQ
Trigger: CTGTAACAACACTGAGAACAAAGAACGGAAGTCCTT...CTGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAGGGCAGAAGAGGGCTaGCACTCCAGAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKRAEEG*HSRAAG
Trigger: TCCTGCTGCTCTGGAGTGCAAGCCCTCTTCTGCCCT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp GGCAGTTCGAAAATCCTCCCGGCTCTGAAATTGCTCGGGGGCAGGTaGTTTCAAGCCGGTGAAGAAACTCGACGATGTGGGAGCATCGGA +
Preference number: 5 (lower is better)
Translates to: GSSKILPALKLLGGR*FQAGEETRRCGSIG
Trigger: TCCGATGCTCCCACATCGTCGAGTTTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTTTCGAACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp TCCTGCTGTCTCTCCTCGCCAAACCAAATGCAAAAGCCTCCAGCCTaGCCTGGAGGTAGAGCCGTTCCTCCAGAGGTTCAGCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: SCCLSSPNQMQKPPA*PGGRAVPPEVQHVP
Trigger: AGGAACATGCTGAACCTCTGGAGGAACGGCTCTACCTCCAGGTCAGGCTGGAGGCTTTTGCATTTGGTTTGGCGAGGAGAGACAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS GCA 90 bp TGGCGTGTGACCTCGCTGACCAGGAGCGTCTTTGGGGCACAGTCATaGCCAAAAATGGTCACTACCGTCTTGAAGGATGGGTGGATGTGT +
Preference number: 5 (lower is better)
Translates to: WRVTSLTRSVFGAQS*PKMVTTVLKDGWMC
Trigger: ACACATCCACCCATCCTTCAAGACGGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTCAGCGAGGTCACACGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp CTCAGAACGTCCAGGGAGTTCACCAAGATCAGAGTCCCAGTGAGGTaGTTCCAGCGCTTGGTGATGGGGTTTTTCATCTTGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LRTSREFTKIRVPVR*FQRLVMGFFILSRP
Trigger: GGGCCTGGACAAGATGAAAAACCCCATCACCAAGCGCTGGAAGCACCTCACTGGGACTCTGATCTTGGTGAACTCCCTGGACGTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp AGTTCAAGGGCTGCACATAGGAGGAGGGGATGTAGCCCATTTCGGTaGTGTTGTGTGCGTACCACCACTCACCGCCAGATGTGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SSRAAHRRRGCSPFR*CCVRTTTHRQMCPR
Trigger: TCTTGGACACATCTGGCGGTGAGTGGTGGTACGCACACAACACCACCGAAATGGGCTACATCCCCTCCTCCTATGTGCAGCCCTTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000416021.5
ENST00000446904.5
CDS CCA 90 bp GTCTTGAGCAACTTACCAAACTTGAGGCTGGACACCGGGCGGTCCTaGAAAGTCGGGTACTTTGTAGTGGTGGCAAACGGGGACAGGATG +
Preference number: 5 (lower is better)
Translates to: VLSNLPNLRLDTGRS*KVGYFVVVANGDRM
Trigger: CATCCTGTCCCCGTTTGCCACCACTACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGCTCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAGCATCGGACTTGGCTaGGAGGACGGAGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSIGLG*EDGEFR
Trigger: TCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGCT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACGCTTGCACACGATGTTaGTCTCCACGGCTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHACTRC*SPRLGS
Trigger: AGACCCAAGCCGTGGAGACAAACATCGTGTGCAAGC...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATCCCCACAGCTGCAGTaGAGCGGGACGGAGACATAT +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSPQLQ*SGTETY
Trigger: ATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAGCAACTTACCAAACTaGAGGCTGGACACCGGGCGG +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKSNLPN*RLDTGR
Trigger: CCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGCT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTATGTACGTGAGGAATTaGCAGGGCCGCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSMYVRN*QGRRIC
Trigger: GCAGATCCTGCGGCCCTGCAAATTCCTCACGTACAT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGCGTCCATCTGCTGCTaGGAGACCTTGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHASICC*ETLASF
Trigger: GAAGCTGGCCAAGGTCTCCAAGCAGCAGATGGACGC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAGGGCAGAAGAGGGCTaGCACTCCAGAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: FLHAGSERGPTTERASFRRAEEG*HSRAAG
Trigger: TCCTGCTGCTCTGGAGTGCAAGCCCTCTTCTGCCCT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCATGTGTGTCCTGGTTCTaGCAGCATAAAATAGCTAAT +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRACVSWF*QHKIAN
Trigger: ATTAGCTATTTTATGCTGCAAGAACCAGGACACACA...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCAAAGGTGCAACTGGTTTaGTTTCTTCTTTGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAKVQLV*FLLWGK
Trigger: TTTTCCCCAAAGAAGAAACAAAACCAGTTGCACCTT...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp TGTGAACACCAGGAGGTGTGGATCACTGAAGGCCATCTCAGAGTCTaGCAGCCACAAAAGATACTGGAGGTAGAGCCGTTCCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: CEHQEVWITEGHLRV*QPQKILEVEPFLQR
Trigger: CCTCTGGAGGAACGGCTCTACCTCCAGTATCTTTTGTGGCTGGCAGACTCTGAGATGGCCTTCAGTGATCCACACCTCCTGGTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCGAAGCACCCTACTGTaGGGGTGCTTGTCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHRSTLL*GCLSLF
Trigger: AAACAGAGACAAGCACCCCAACAGTAGGGTGCTTCG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCCGAAAGGTGTGGGGTaGTCTACGAGCAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: FLHAGSERGPTTERASFRPKGVG*STSKAL
Trigger: CAGTGCCTTGCTCGTAGACAACCCCACACCTTTCGG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCGCTGTCACTCAGTGTaGAGTTCCGGTAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHRCHSV*SSGSSR
Trigger: CCTTGAACTACCGGAACTCAACACTGAGTGACAGCG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGCCACCGGGGCAGGGTaGGGTGCCTGGCGTGTGACC +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATATGAG*GAWRVT
Trigger: GGTCACACGCCAGGCACCCAACCCTGCCCCGGTGGC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCTTGAGAAACCTCCTTaGCCCGGAAGGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKLEKPP*PGRLDG
Trigger: GCCATCAAGCCTTCCGGGCAAAGGAGGTTTCTCAAG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAGCAACTTACCAAACTaGAGGCTGGACACCGGGCGG +
Preference number: 5 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHSNLPN*RLDTGR
Trigger: CCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGCT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAGGTGCTTCCAGCGCTaGGTGATGGGGTTTTTCATC +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSRCFQR*VMGFFI
Trigger: GATGAAAAACCCCATCACCAAGCGCTGGAAGCACCT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTCCGCGGTGACAGCAGGGCACGCAGGGCAGAAGAGGGCTTGCACTCCAGAGCACAAATGGCATTGTTCTaGTCAATGACTAATTGCACA +
Preference number: 5 (lower is better)
Translates to: LRGDSRARRAEEGLHSRAQMALF*SMTNCT
Trigger: TGTGCAATTAGTCATTGACAAGAACAATGCCATTTG...TGCTCTGGAGTGCAAGCCCTCTTCTGCCCTGCGTGCCCTGCTGTCACCGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp AGCTTCCTGTGGTTTAGCCAGGCAGTTCGAAAATCCTCCCGGCTCTaGAATTGCTCGGGGGCAGGTGATTTCAAGCCGGTGAAGAAACTC +
Preference number: 5 (lower is better)
Translates to: SFLWFSQAVRKSSRL*NCSGAGDFKPVKKL
Trigger: GAGTTTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTTTCGAACTGCCTGGCTAAACCACAGGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACCGAAAGGTGTGGGGTaGTCTACGAGCAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLPKGVG*STSKAL
Trigger: CAGTGCCTTGCTCGTAGACAACCCCACACCTTTCGG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCCATTCAGAAATGGATaGGTCTGGACCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHPFRNG*VWTPFQ
Trigger: CTGGAATGGGGTCCAGACCAATCCATTTCTGAATGG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATTCCCCACAGCTGCAGTaGAGCGGGACGGAGACATAT +
Preference number: 5 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHSPQLQ*SGTETY
Trigger: ATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGA...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAATCCTCGCACCACTTaGGCCTGCTCGCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLNPRTT*ACSLAL
Trigger: CAAAGCCAGCGAGCAGGCCAAAGTGGTGCGAGGATT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATAAGTCAGAGAGCTCGTaGGGGTTCTGGGAGGTGATG +
Preference number: 5 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHKSESS*GFWEVM
Trigger: CATCACCTCCCAGAACCCCAACGAGCTCTCTGACTT...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGCTTTGCCCGGAAGGCTaGATGGCACTTTTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: FLHAGSERGPTTERASFRLCPEG*MALLGG
Trigger: ACCCCCTAAAAGTGCCATCAAGCCTTCCGGGCAAAG...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGATGTACGTGAGGAATTaGCAGGGCCGCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: FLHAGSERGPTTERASFRMYVRN*QGRRIC
Trigger: GCAGATCCTGCGGCCCTGCAAATTCCTCACGTACAT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp GCAAATCCACAGTACTTTTGGGATTCAGCTCATCCAGGCTGGGCATaGCGGGCACGTTCCCATTCAGAAATGGATTGGTCTGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: ANPQYFWDSAHPGWA*RARSHSEMDWSGPH
Trigger: ATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCATGCCCAGCCTGGATGAGCTGAATCCCAAAAGTACTGTGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp GACTGGAAGCTCATCGAAGATGTTGCCAGTGCTATTCGTGGTGGCTaGGCTGGATTCGGTGAAGGAGGATGTACCTGCGTCAAAAAGGAG +
Preference number: 5 (lower is better)
Translates to: DWKLIEDVASAIRGG*AGFGEGGCTCVKKE
Trigger: CTCCTTTTTGACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAGCCACCACGAATAGCACTGGCAACATCTTCGATGAGCTTCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACCTGGGAGAAGGCACTTaGATGTCATTAAAGCTCGTC +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHLGEGT*MSLKLV
Trigger: GACGAGCTTTAATGACATCAAAGTGCCTTCTCCCAG...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGAGCTCATCGAAGATGTaGCCAGTGCTATTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKSSSKM*PVLFVV
Trigger: CACCACGAATAGCACTGGCAACATCTTCGATGAGCT...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAGCTCATCGAAGATGTaGCCAGTGCTATTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSSSKM*PVLFVV
Trigger: CACCACGAATAGCACTGGCAACATCTTCGATGAGCT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCTTCTGAAGAAGGGGTaGTCCCGCCTGACCGGCGGC +
Preference number: 5 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHLLKKG*SRLTGG
Trigger: GCCGCCGGTCAGGCGGGACAACCCCTTCTTCAGAAG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACCGGAGCTATCCAGCTaGCACACGATGTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLPELSS*HTMFVS
Trigger: GGAGACAAACATCGTGTGCAAGCTGGATAGCTCCGG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACTTTGCCCGGAAGGCTaGATGGCACTTTTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLLCPEG*MALLGG
Trigger: ACCCCCTAAAAGTGCCATCAAGCCTTCCGGGCAAAG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTGCCCGGAAGGCTaGATGGCACTTTTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHLCPEG*MALLGG
Trigger: ACCCCCTAAAAGTGCCATCAAGCCTTCCGGGCAAAG...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCCGATGTACCACTCCTaGGTCCACAGCTGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHPMYHS*VHSWPR
Trigger: CCGGGGCCAGCTGTGGACCAAGGAGTGGTACATCGG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGACCACCAGCACGTTCTaGGTGTGCACGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTTTSTF*VCTRPT
Trigger: GGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGGT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCTACTGTTGGGGTGCTaGTCTCTGTTTCAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKLLLGC*SLFQLS
Trigger: GGACAACTGAAACAGAGACAAGCACCCCAACAGTAG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS TCA 90 bp CGAAGATGTTGCCAGTGCTATTCGTGGTGGCTGAGCTGGATTCGGTaGAGGAGGATGTACCTGCGTCAAAAAGGAGCAAATCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: RRCCQCYSWWLSWIR*RRMYLRQKGANPQY
Trigger: GTACTGTGGATTTGCTCCTTTTTGACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAGCCACCACGAATAGCACTGGCAACATCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp AGGCTGGGCATGACGGGCACGTTCCCATTCAGAAATGGATTGGTCTaGACCCCATTCCAGAAAGGGTTATTACTGTACATTCTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RLGMTGTFPFRNGLV*TPFQKGLLLYILPG
Trigger: ACCAGGCAGAATGTACAGTAATAACCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCATGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 90 bp CAGCTCATCCAGGCTGGGCATGACGGGCACGTTCCCATTCAGAAATaGATTGGTCTGGACCCCATTCCAGAAAGGGTTATTACTGTACAT +
Preference number: 5 (lower is better)
Translates to: QLIQAGHDGHVPIQK*IGLDPIPERVITVH
Trigger: ATGTACAGTAATAACCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCATGCCCAGCCTGGATGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATGATCTCACCAGCCTCTaGCCCTTCAGTTTCAAATGC +
Preference number: 5 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHDLTSL*PFSFKC
Trigger: GCATTTGAAACTGAAGGGCAAGAGGCTGGTGAGATC...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCTGGGAGAAGGCACTTaGATGTCATTAAAGCTCGTC +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKLGEGT*MSLKLV
Trigger: GACGAGCTTTAATGACATCAAAGTGCCTTCTCCCAG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAATCGCAATCACTTCCTTaGCATTTCCGAAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQSQSLP*HFRKVW
Trigger: CCACACCTTTCGGAAATGCAAAGGAAGTGATTGCGA...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACGCTGTCACTCAGTGTaGAGTTCCGGTAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLRCHSV*SSGSSR
Trigger: CCTTGAACTACCGGAACTCAACACTGAGTGACAGCG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGTGGGAGCATCGGACTaGGCTTGGAGGACGGAGAGT +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTVGASD*AWRTES
Trigger: ACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCAC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGATGGTCACTACCGTCTaGAAGGATGGGTGGATGTGT +
Preference number: 5 (lower is better)
Translates to: FLHAGSERGPTTERASFRMVTTV*KDGWMC
Trigger: ACACATCCACCCATCCTTCAAGACGGTAGTGACCAT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTGCTCCCTTCCAACACGCGACATCTACGACGCATTGTGAGATTCACACAGCATTGCCGCACCACAGTCTaGAGCAACTTACCAAACTTG +
Preference number: 5 (lower is better)
Translates to: LLPSNTRHLRRIVRFTQHCRTTV*SNLPNL
Trigger: CAAGTTTGGTAAGTTGCTCAAGACTGTGGTGCGGCA...ATGCTGTGTGAATCTCACAATGCGTCGTAGATGTCGCGTGTTGGAAGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCTCAGGGCACCTAAATGCTAATGCGGGACTTCACTCTGCCCACTCTTTGTTCTCAGTGTaGTTACAGTCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GRNSSGHLNANAGLHSAHSLFSV*LQSSFS
Trigger: GCTGAAGGAGGACTGTAACAACACTGAGAACAAAGA...GTGGGCAGAGTGAAGTCCCGCATTAGCATTTAGGTGCCCTGAGCTGTTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGGCGTCCATCTGCTGCTaGGAGACCTTGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTASICC*ETLASF
Trigger: GAAGCTGGCCAAGGTCTCCAAGCAGCAGATGGACGC...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATAGGTGCTTCCAGCGCTaGGTGATGGGGTTTTTCATC +
Preference number: 5 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHRCFQR*VMGFFI
Trigger: GATGAAAAACCCCATCACCAAGCGCTGGAAGCACCT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAGGTGCTTCCAGCGCTaGGTGATGGGGTTTTTCATC +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLRCFQR*VMGFFI
Trigger: GATGAAAAACCCCATCACCAAGCGCTGGAAGCACCT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACATCAGCATAAGGCGTaGCTTGTGAGGCCAACCACA +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLHQHKA*LVRPTT
Trigger: TGTGGTTGGCCTCACAAGCAACGCCTTATGCTGATG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCCTCACTCTACTGATTaGCCAGTATCAGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKPHSTD*PVSVLP
Trigger: AGGAAGGACTGATACTGGCAAATCAGTAGAGTGAGG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAACCTCACTCTACTGATTaGCCAGTATCAGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQPHSTD*PVSVLP
Trigger: AGGAAGGACTGATACTGGCAAATCAGTAGAGTGAGG...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAAGTGTCCTGGCACGTaGCTAAGGATCACCTCACTC +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLKCPGT*LRITSL
Trigger: GAGTGAGGTGATCCTTAGCAACGTGCCAGGACACTT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 90 bp TGGGCTGTCTGGAAGATTATCAATCATACCGCTGTCACTCAGTGTTaGGTTCCGGTAGTTCAAGGGCTGCACATAGGAGGAGGGGATGTA +
Preference number: 5 (lower is better)
Translates to: WAVWKIINHTAVTQC*VPVVQGLHIGGGDV
Trigger: TACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAACACTGAGTGACAGCGGTATGATTGATAATCTTCCAGACAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000446904.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAGCAGCTCCAGCTCCTaGGCTACCTCGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATSSSSS*ATSSGL
Trigger: CAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTGCT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGTTTGTCTCCACGGCTaGGGTCTGGCCCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATVCLHG*GLAPTR
Trigger: CCTGGTTGGGGCCAGACCCAAGCCGTGGAGACAAAC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAACCACCAGCACGTTCTaGGTGTGCACGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: RESETLPVTFKYLYTSLTTTSTF*VCTRPT
Trigger: GGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGGT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CTTGTGAGGCCAACCACAGCATCTGCAATAAGCACGAGAGTCAGTGGCCACCAAAATTATGGGGTGGAGTaGAGAAGCACAATCGAAGGT +
Preference number: 5 (lower is better)
Translates to: LVRPTTASAISTRVSGHQNYGVE*RSTIEG
Trigger: ACCTTCGATTGTGCTTCTCAACTCCACCCCATAATT...TTGGTGGCCACTGACTCTCGTGCTTATTGCAGATGCTGTGGTTGGCCTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCCCATTTCGGTGGTGTaGTGTGCGTACCACCACTCA +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTPISVV*CAYHHS
Trigger: TGAGTGGTGGTACGCACACAACACCACCGAAATGGG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACACTTCTGAAGAAGGGGTaGTCCCGCCTGACCGGCGGC +
Preference number: 5 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTLLKKG*SRLTGG
Trigger: GCCGCCGGTCAGGCGGGACAACCCCTTCTTCAGAAG...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAATACAGGGCTCCAGGTaGTGCAGCTGTGCCTGGACC +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATIQGSR*CSCAWT
Trigger: GGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTAT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTACTGCTTTCTAATCTATaGGCAGAAACAGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLLLSNL*AETAQG
Trigger: GCCCTGAGCTGTTTCTGCCAATAGATTAGAAAGCAG...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGGCTGAGTAAGGTGCAACTGGTTTaGTTTCTTCTTTGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: TQGVKEVQQPNEHLSGLSKVQLV*FLLWGK
Trigger: TTTTCCCCAAAGAAGAAACAAAACCAGTTGCACCTT...ACTCAGCCCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 90 bp CGAAAGTCAGTCGTGACTTCACCTCACATTCCGCCAGAAACCGACTaGAGATTGTTACCAAAGAATCCTTGTGCAAACAAACACCAGCCA +
Preference number: 5 (lower is better)
Translates to: RKSVVTSPHIPPETD*RLLPKNPCANKHQP
Trigger: TGGCTGGTGTTTGTTTGCACAAGGATTCTTTGGTAACAATCTGCAGTCGGTTTCTGGCGGAATGTGAGGTGAAGTCACGACTGACTTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446904.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCGAAGCACCCTACTGTaGGGGTGCTTGTCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTRSTLL*GCLSLF
Trigger: AAACAGAGACAAGCACCCCAACAGTAGGGTGCTTCG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR CAA 90 bp AACTATGACTTCCTTCCGAGGAGACACAGGTACACCAGGAAGGAAGAGGGGTTAAAATCCACAGTACTTTaGGGATTCAGCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: NYDFLPRRHRYTRKEEGLKSTVL*GFSSSR
Trigger: CCTGGATGAGCTGAATCCCAAAAGTACTGTGGATTT...TAACCCCTCTTCCTTCCTGGTGTACCTGTGTCTCCTCGGAAGGAAGTCATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAAGTCAGAGAGCTCGTaGGGGTTCTGGGAGGTGATG +
Preference number: 5 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHKSESS*GFWEVM
Trigger: CATCACCTCCCAGAACCCCAACGAGCTCTCTGACTT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATCTTTCCGGAAGGACTTCCGTTCTTaGTTCTCAGTGTTGTTACAG +
Preference number: 5 (lower is better)
Translates to: FLHAGSERGPTTERASFRKDFRS*FSVLLQ
Trigger: CTGTAACAACACTGAGAACAAAGAACGGAAGTCCTT...CCGGAAAGATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACCCATTTCGGTGGTGTaGTGTGCGTACCACCACTCA +
Preference number: 5 (lower is better)
Translates to: RESETLPVTFKYLYTSLTPISVV*CAYHHS
Trigger: TGAGTGGTGGTACGCACACAACACCACCGAAATGGG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCGCTGTCACTCAGTGTaGAGTTCCGGTAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHRCHSV*SSGSSR
Trigger: CCTTGAACTACCGGAACTCAACACTGAGTGACAGCG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGAGCTCATCGAAGATGTaGCCAGTGCTATTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTSSSKM*PVLFVV
Trigger: CACCACGAATAGCACTGGCAACATCTTCGATGAGCT...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACACCGGAGCTATCCAGCTaGCACACGATGTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATPELSS*HTMFVS
Trigger: GGAGACAAACATCGTGTGCAAGCTGGATAGCTCCGG...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACACTTGAGAAACCTCCTTaGCCCGGAAGGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: RESETLPVTFKYLYTSLTLEKPP*PGRLDG
Trigger: GCCATCAAGCCTTCCGGGCAAAGGAGGTTTCTCAAG...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp GATTCACCTTCTTACACGCAGGGAGTGAAAGAGGTCCAACAACCGAACGAGCATAAGGACTTCCGTTCTTaGTTCTCAGTGTTGTTACAG +
Preference number: 5 (lower is better)
Translates to: DSPSYTQGVKEVQQPNEHKDFRS*FSVLLQ
Trigger: CTGTAACAACACTGAGAACAAAGAACGGAAGTCCTT...ATGCTCGTTCGGTTGTTGGACCTCTTTCACTCCCTGCGTGTAAGAAGGTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp AAATGGTCCCTGACAACTGCAGGCACACAGGAAGTGTCCTGGCACGTTGCTAAGCAAATGGCATTGTTCTaGTCAATGACTAATTGCACA +
Preference number: 5 (lower is better)
Translates to: KWSLTTAGTQEVSWHVAKQMALF*SMTNCT
Trigger: TGTGCAATTAGTCATTGACAAGAACAATGCCATTTG...CTTAGCAACGTGCCAGGACACTTCCTGTGTGCCTGCAGTTGTCAGGGACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATCATCAGCATAAGGCGTaGCTTGTGAGGCCAACCACA +
Preference number: 5 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHHQHKA*LVRPTT
Trigger: TGTGGTTGGCCTCACAAGCAACGCCTTATGCTGATG...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGCTGGGAGAAGGCACTTaGATGTCATTAAAGCTCGTC +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTLGEGT*MSLKLV
Trigger: GACGAGCTTTAATGACATCAAAGTGCCTTCTCCCAG...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTCGCAATCACTTCCTTaGCATTTCCGAAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTSQSLP*HFRKVW
Trigger: CCACACCTTTCGGAAATGCAAAGGAAGTGATTGCGA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAAAGTGTCCTGGCACGTaGCTAAGGATCACCTCACTC +
Preference number: 5 (lower is better)
Translates to: RESETLPVTFKYLYTSLTKCPGT*LRITSL
Trigger: GAGTGAGGTGATCCTTAGCAACGTGCCAGGACACTT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAGATCTCACCAGCCTCTaGCCCTTCAGTTTCAAATGC +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATDLTSL*PFSFKC
Trigger: GCATTTGAAACTGAAGGGCAAGAGGCTGGTGAGATC...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344528.8
ENST00000409212.5
CDS-3UTR CAA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAGCTTGCACACGATGTTaGTCTCCACGGCTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTACTRC*SPRLGS
Trigger: AGACCCAAGCCGTGGAGACAAACATCGTGTGCAAGC...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACAATGTACGTGAGGAATTaGCAGGGCCGCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTMYVRN*QGRRIC
Trigger: GCAGATCCTGCGGCCCTGCAAATTCCTCACGTACAT...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TTCACTCTGCCCACTGAAGCTCACCAAAGATTCACATATTCTATGGATGGTCATAATTATGGGGTGGAGTaGAGAAGCACAATCGAAGGT +
Preference number: 5 (lower is better)
Translates to: FTLPTEAHQRFTYSMDGHNYGVE*RSTIEG
Trigger: ACCTTCGATTGTGCTTCTCAACTCCACCCCATAATT...ATGACCATCCATAGAATATGTGAATCTTTGGTGAGCTTCAGTGGGCAGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACGCATTGTGAGATTCACACAGCATGTCTGCACCCTAAAGTTATTAATGCAACAAAATCCACAGTACTTTaGGGATTCAGCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: THCEIHTACLHPKVINATKSTVL*GFSSSR
Trigger: CCTGGATGAGCTGAATCCCAAAAGTACTGTGGATTT...TGTTGCATTAATAACTTTAGGGTGCAGACATGCTGTGTGAATCTCACAATGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATGCCGCACCACAGTCTaGAGCAACTTACCAAACTTG +
Preference number: 5 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTCRTTV*SNLPNL
Trigger: CAAGTTTGGTAAGTTGCTCAAGACTGTGGTGCGGCA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp TGTACCCGTTTACTGAAAAGCCACTTTTTCCCACGTGATTCACCTTCTTACACGTGTGTGTCCTGGTTCTaGCAGCATAAAATAGCTAAT +
Preference number: 5 (lower is better)
Translates to: CTRLLKSHFFPRDSPSYTCVSWF*QHKIAN
Trigger: ATTAGCTATTTTATGCTGCAAGAACCAGGACACACA...CGTGTAAGAAGGTGAATCACGTGGGAAAAAGTGGCTTTTCAGTAAACGGGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATCGCAATCACTTCCTTaGCATTTCCGAAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTSQSLP*HFRKVW
Trigger: CCACACCTTTCGGAAATGCAAAGGAAGTGATTGCGA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp CGGGAATCAGAAACGCTCCCAGTGACCTTTAAATACCTATATACATCTCTAACAAAGGTGCAACTGGTTTaGTTTCTTCTTTGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: RESETLPVTFKYLYTSLTKVQLV*FLLWGK
Trigger: TTTTCCCCAAAGAAGAAACAAAACCAGTTGCACCTT...TGTTAGAGATGTATATAGGTATTTAAAGGTCACTGGGAGCGTTTCTGATTCCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS-3UTR CAA 90 bp ACAACGTTTCAGGCCAGTAAGGGAGTATACATTGATTATACTAAGGAAGTAACATGTGTGTCCTGGTTCTaGCAGCATAAAATAGCTAAT +
Preference number: 5 (lower is better)
Translates to: TTFQASKGVYIDYTKEVTCVSWF*QHKIAN
Trigger: ATTAGCTATTTTATGCTGCAAGAACCAGGACACACA...TGTTACTTCCTTAGTATAATCAATGTATACTCCCTTACTGGCCTGAAACGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GGCGGCTCTCCCGCGGCTCCTCCCGCGCGGCATCTCTaGGCGCCCGACACCCGGTCAGGGCCAGCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: GGSPAAPPARHL*APDTRSGPAGP
Trigger: AGGCCCAGCTGGCCCTGACCGGGTGTCGGGCGCCCAGAGATGCCGCGCGGGAGGAGCCGCGGGAGAGCCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS GCA 72 bp CCCGCCCGCGGGCCGCCGGCGCTGTCACCTCGCGGCTaGTCGGTCACCCGATCGCCAAGCCAGAAACCGGAG +
Preference number: 6 (lower is better)
Translates to: PARGPPALSPRG*SVTRSPSQKPE
Trigger: CTCCGGTTTCTGGCTTGGCGATCGGGTGACCGAGCAGCCGCGAGGTGACAGCGCCGGCGGCCCGCGGGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS TCA 72 bp GCTAGGAGCCGCGGGACCCAGGGTTGGGGTCCCAACTaGCACCCGCCCGTGCCGCGGAGCGGGCTTCTCGGT +
Preference number: 6 (lower is better)
Translates to: ARSRGTQGWGPN*HPPVPRSGLLG
Trigger: ACCGAGAAGCCCGCTCCGCGGCACGGGCGGGTGTCAGTTGGGACCCCAACCCTGGGTCCCGCGGCTCCTAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS GCA 72 bp TGCAGGGCCGCAGGATCTGCTCCAGCAGCACCGAGGTaGTCAGCTCGGGGCCCGAGCACAGGCTGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: CRAAGSAPAAPR*SARGPSTGWAG
Trigger: CCCGGCCCAGCCTGTGCTCGGGCCCCGAGCTGAGCACCTCGGTGCTGCTGGAGCAGATCCTGCGGCCCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GGCTGGGCCGGGCCCTGCCGACCACCAGCACGTTCTTaGTGTGCACGAGGCCCACCCTGCCCTGGTAGTAGC +
Preference number: 6 (lower is better)
Translates to: GWAGPCRPPARS*CARGPPCPGSS
Trigger: GCTACTACCAGGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGGTCGGCAGGGCCCGGCCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp CACAGCTGCAGGGCCACCGGGGCAGGGTTGGGTGCCTaGCGTGTGACCTCGCTGACCAGGAGCGTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: HSCRATGAGLGA*RVTSLTRSVFG
Trigger: CCCAAAGACGCTCCTGGTCAGCGAGGTCACACGCCAGGCACCCAACCCTGCCCCGGTGGCCCTGCAGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 72 bp GGACCCAGGGTTGGGGTCCCAACTGACACCCGCCCGTaGCGCGGAGCGGGCTTCTCGGTAAACATCGCTCAG +
Preference number: 6 (lower is better)
Translates to: GPRVGVPTDTRP*RGAGFSVNIAQ
Trigger: CTGAGCGATGTTTACCGAGAAGCCCGCTCCGCGGCACGGGCGGGTGTCAGTTGGGACCCCAACCCTGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS CCA 72 bp TGGGTCTCCCCAGGGGCGACGTGGCCCTCGGGCACGTaGATGCTGATGCTGGTGTCAGGAAGCTGGACAGCA +
Preference number: 6 (lower is better)
Translates to: WVSPGATWPSGT*MLMLVSGSWTA
Trigger: TGCTGTCCAGCTTCCTGACACCAGCATCAGCATCCACGTGCCCGAGGGCCACGTCGCCCCTGGGGAGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp ACACACCACCCAACCTGGGCTCTGTCCCGCGGCTGCTaGGGTGGGGGAGCTGCTAGCCTGGCTTCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: THHPTWALSRGC*GGGAASLASWK
Trigger: CTTCCAAGAAGCCAGGCTAGCAGCTCCCCCACCCCAGCAGCCGCGGGACAGAGCCCAGGTTGGGTGGTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS GCA 72 bp TCAGATCTCATCGATCCATCAGGCTCCACGACCCTCTaGTCGCTGAGTCCGGCGGCTCTCCCGCGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SDLIDPSGSTTL*SLSPAALPRLL
Trigger: GAGGAGCCGCGGGAGAGCCGCCGGACTCAGCGAGCAGAGGGTCGTGGAGCCTGATGGATCGATGAGATCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484097.1
CDS CCA 72 bp TCAGGGTCCCCTCTGACTTGCAGCGAGGGAGGCCATTaGAGTTGGCCGCTCGGATCCGCTGAGCCGCCATCT +
Preference number: 6 (lower is better)
Translates to: SGSPLTCSEGGH*SWPLGSAEPPS
Trigger: AGATGGCGGCTCAGCGGATCCGAGCGGCCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000416021.5
ENST00000444916.5
ENST00000446904.5
ENST00000454947.1
CDS TCA 72 bp CGGGCTCACTATCCAGCTCTGCCCGGCAGAAAAAGGTaGGCGGCAGGTTCACGTAGCCCAGGGCGTCAGCGA +
Preference number: 6 (lower is better)
Translates to: RAHYPALPGRKR*AAGSRSPGRQR
Trigger: TCGCTGACGCCCTGGGCTACGTGAACCTGCCGCTCACCTTTTTCTGCCGGGCAGAGCTGGATAGTGAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 72 bp GCCACGACAGCCACGTACATACAGGGCTCCAGGTTGTaGAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: ATTATYIQGSRL*SCAWTVSPQLQ
Trigger: CTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGTGGCTGTCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 72 bp GACGGACGCCACCCGCTCGGGCTCACTATCCAGCTCTaGCCGGCAGAAAAAGGTGAGCGGCAGGTTCACGTA +
Preference number: 6 (lower is better)
Translates to: DGRHPLGLTIQL*PAEKGERQVHV
Trigger: TACGTGAACCTGCCGCTCACCTTTTTCTGCCGGGCAGAGCTGGATAGTGAGCCCGAGCGGGTGGCGTCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 72 bp CATGCTGGCTGCCGGGGGAGGCCACCCTCAGTTCCTTaGCACATGGCCTCTCTATATGGCAGCCTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: HAGCRGRPPSVP*HMASLYGSLLH
Trigger: GTGGAGCAGGCTGCCATATAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS GCA 72 bp GTGGCCATGGGACTGAGGCTTCAACTGCATGCTGGCTaGCGGGGGAGGCCACCCTCAGTTCCTTGCCACATG +
Preference number: 6 (lower is better)
Translates to: VAMGLRLQLHAG*RGRPPSVPCHM
Trigger: CATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGCAGTTGAAGCCTCAGTCCCATGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CCA 72 bp TTCATGGAGATCTGCTGGGTCTCCCCAGGGGCGACGTaGCCCTCGGGCACGTGGATGCTGATGCTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: FMEICWVSPGAT*PSGTWMLMLVS
Trigger: TGACACCAGCATCAGCATCCACGTGCCCGAGGGCCACGTCGCCCCTGGGGAGACCCAGCAGATCTCCATGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp CAGCACCCCCGGAGCTATCCAGCTTGCACACGATGTTaGTCTCCACGGCTTGGGTCTGGCCCCAACCAGGGC +
Preference number: 6 (lower is better)
Translates to: QHPRSYPACTRC*SPRLGSGPNQG
Trigger: GCCCTGGTTGGGGCCAGACCCAAGCCGTGGAGACAAACATCGTGTGCAAGCTGGATAGCTCCGGGGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp TGGGCCACGACAGCCACGTACATACAGGGCTCCAGGTaGTGCAGCTGTGCCTGGACCGTGTCCCCACAGCTG +
Preference number: 6 (lower is better)
Translates to: WATTATYIQGSR*CSCAWTVSPQL
Trigger: CAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGTGGCTGTCGTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp GCATGCTGGCTGCCGGGGGAGGCCACCCTCAGTTCCTaGCCACATGGCCTCTCTATATGGCAGCCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: ACWLPGEATLSS*PHGLSIWQPAP
Trigger: TGGAGCAGGCTGCCATATAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CAA 90 bp CTTGGGCCATGGGCCACGACAGCCACGTACATACAGGGCTCCAGGTaGTGCAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAGTTGAGC +
Preference number: 6 (lower is better)
Translates to: LGPWATTATYIQGSR*CSCAWTVSPQLQLS
Trigger: GCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGTGGCTGTCGTGGCCCATGGCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 90 bp TCCAGGTTGTGCAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAGTaGAGCGGGACGGAGACATATGGCCCTTCCTTCGAGTCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SRLCSCAWTVSPQLQ*SGTETYGPSFESLL
Trigger: GAGGAGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 90 bp TCCATCCCCATCTCGTCGCAGGGCGACGTGAGAACAATCCCTCCTTaGTGTACACACCACCCAACCTGGGCTCTGTCCCGCGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SIPISSQGDVRTIPP*CTHHPTWALSRGCW
Trigger: CCAGCAGCCGCGGGACAGAGCCCAGGTTGGGTGGTGTGTACACAAAGGAGGGATTGTTCTCACGTCGCCCTGCGACGAGATGGGGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS TCA 72 bp GCAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAGTTaGGCGGGACGGAGACATATGGCCCTTCCTTCGAGT +
Preference number: 6 (lower is better)
Translates to: AAVPGPCPHSCS*AGRRHMALPSS
Trigger: ACTCGAAGGAAGGGCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp CAGGAGAGAAGGGAGACGCCTACTCCTGAATCAGGGTaGCTCGGCAGTCTGGCCCAGGCCAGAGCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: QERRETPTPESG*LGSLAQARAPV
Trigger: CACAGGAGCTCTGGCCTGGGCCAGACTGCCGAGTCACCCTGATTCAGGAGTAGGCGTCTCCCTTCTCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454947.1
CDS GCA 72 bp ACCCTTCGCTCAGGTCAATCAGGGTCCCCTCTGACTTaGAGCGAGGGAGGCCATTGGAGTTGGCCGCTCGGA +
Preference number: 6 (lower is better)
Translates to: TLRSGQSGSPLT*SEGGHWSWPLG
Trigger: TCCGAGCGGCCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACCCTGATTGACCTGAGCGAAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000416021.5
ENST00000444916.5
ENST00000446904.5
ENST00000454947.1
CDS GCA 72 bp CCACCAGCACGTTCTTGGTGTGCACGAGGCCCACCCTaGCCTGGTAGTAGCCGATGTACCACTCCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: PPARSWCARGPP*PGSSRCTTPWS
Trigger: GGACCAAGGAGTGGTACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTGCACACCAAGAACGTGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp TCGGGCACGTGGATGCTGATGCTGGTGTCAGGAAGCTaGACAGCACCCCCGGAGCTATCCAGCTTGCACACG +
Preference number: 6 (lower is better)
Translates to: SGTWMLMLVSGS*TAPPELSSLHT
Trigger: CGTGTGCAAGCTGGATAGCTCCGGGGGTGCTGTCCAGCTTCCTGACACCAGCATCAGCATCCACGTGCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GTCCCCACAGCTGCAGTTGAGCGGGACGGAGACATATaGCCCTTCCTTCGAGTCGCTCCTCAGGCACTGGAG +
Preference number: 6 (lower is better)
Translates to: VPTAAVERDGDI*PFLRVAPQALE
Trigger: CTCCAGTGCCTGAGGAGCGACTCGAAGGAAGGGCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp ACGTACATACAGGGCTCCAGGTTGTGCAGCTGTGCCTaGACCGTGTCCCCACAGCTGCAGTTGAGCGGGACG +
Preference number: 6 (lower is better)
Translates to: TYIQGSRLCSCA*TVSPQLQLSGT
Trigger: CGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCACAACCTGGAGCCCTGTATGTACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GAGGGGAGGGGACCCATTCAAATCACGAAGTCGTCCTaGTCCGCAGGGCTGAAGGCGGCTGCTCTCAGAACG +
Preference number: 6 (lower is better)
Translates to: EGRGPIQITKSS*SAGLKAAALRT
Trigger: CGTTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGGACGACTTCGTGATTTGAATGGGTCCCCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp AGAACAATCCCTCCTTTGTGTACACACCACCCAACCTaGGCTCTGTCCCGCGGCTGCTGGGGTGGGGGAGCT +
Preference number: 6 (lower is better)
Translates to: RTIPPLCTHHPT*ALSRGCWGGGA
Trigger: AGCTCCCCCACCCCAGCAGCCGCGGGACAGAGCCCAGGTTGGGTGGTGTGTACACAAAGGAGGGATTGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS CCA 72 bp GCCACCCTCAGTTCCTTGCCACATGGCCTCTCTATATaGCAGCCTGCTCCACCACAGCCAGCAGGGGAGACC +
Preference number: 6 (lower is better)
Translates to: ATLSSLPHGLSI*QPAPPQPAGET
Trigger: GGTCTCCCCTGCTGGCTGTGGTGGAGCAGGCTGCCATATAGAGAGGCCATGTGGCAAGGAACTGAGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CCA 72 bp ACTTGTGGCCATGGGACTGAGGCTTCAACTGCATGCTaGCTGCCGGGGGAGGCCACCCTCAGTTCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: TCGHGTEASTAC*LPGEATLSSLP
Trigger: TGGCAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGCAGTTGAAGCCTCAGTCCCATGGCCACAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CAA 72 bp TGCAGCTGTGCCTGGACCGTGTCCCCACAGCTGCAGTaGAGCGGGACGGAGACATATGGCCCTTCCTTCGAG +
Preference number: 6 (lower is better)
Translates to: CSCAWTVSPQLQ*SGTETYGPSFE
Trigger: CTCGAAGGAAGGGCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGGGACACGGTCCAGGCACAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 90 bp TCGTTGGGGTTCTGGGAGGTGATGGGGAAGATCAGGCGGCTCACCTaGCCCAGCTTCAGCTGGAATCCTCGCACCACTTTGGCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SLGFWEVMGKIRRLT*PSFSWNPRTTLACS
Trigger: CGAGCAGGCCAAAGTGGTGCGAGGATTCCAGCTGAAGCTGGGCAAGGTGAGCCGCCTGATCTTCCCCATCACCTCCCAGAACCCCAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp AACTGGGTGAGGATGGCCTCCTGGTCGTCCTTCACCTaGACCCGCAGCGTGAAGTCAGAGAGCTCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: NWVRMASWSSFT*TRSVKSESSLG
Trigger: CCCCAACGAGCTCTCTGACTTCACGCTGCGGGTTCAGGTGAAGGACGACCAGGAGGCCATCCTCACCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp GCAGCAGTGGGGTCTCCTCCTCAAGTCACACGGCGCTaGCATCACTACAGAGCCGGCGCCTTTGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: AAVGSPPQVTRR*HHYRAGAFESR
Trigger: TCTGCTCTCAAAGGCGCCGGCTCTGTAGTGATGTCAGCGCCGTGTGACTTGAGGAGGAGACCCCACTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS GCA 72 bp AGCTCCTGTGGAGAAAGCGACAGGCTGCATGGAGGCTaGATCCCAGCCTCACTGTCCTCTTCCCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSCGESDRLHGG*IPASLSSSPAA
Trigger: AGCAGCAGGGGAAGAGGACAGTGAGGCTGGGATGCAGCCTCCATGCAGCCTGTCGCTTTCTCCACAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454947.1
CDS GCA 72 bp GTTACTTGTGGCCATGGGACTGAGGCTTCAACTGCATaGTGGCTGCCGGGGGAGGCCACCCTCAGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: VTCGHGTEASTA*WLPGEATLSSL
Trigger: CAAGGAACTGAGGGTGGCCTCCCCCGGCAGCCAGCATGCAGTTGAAGCCTCAGTCCCATGGCCACAAGTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CCA 72 bp ACCCGCAGCGTGAAGTCAGAGAGCTCGTTGGGGTTCTaGGAGGTGATGGGGAAGATCAGGCGGCTCACCTTG +
Preference number: 6 (lower is better)
Translates to: TRSVKSESSLGF*EVMGKIRRLTL
Trigger: CAAGGTGAGCCGCCTGATCTTCCCCATCACCTCCCAGAACCCCAACGAGCTCTCTGACTTCACGCTGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp AGACGCCTACTCCTGAATCAGGGTGACTCGGCAGTCTaGCCCAGGCCAGAGCTCCTGTGGAGAAAGCGACAG +
Preference number: 6 (lower is better)
Translates to: RRLLLNQGDSAV*PRPELLWRKRQ
Trigger: CTGTCGCTTTCTCCACAGGAGCTCTGGCCTGGGCCAGACTGCCGAGTCACCCTGATTCAGGAGTAGGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454947.1
CDS CCA 72 bp GGCTGCTGGGGTGGGGGAGCTGCTAGCCTGGCTTCTTaGAAGAGTGAGAACGTTCCACGGGTGGCAACAGAA +
Preference number: 6 (lower is better)
Translates to: GCWGGGAASLAS*KSENVPRVATE
Trigger: TTCTGTTGCCACCCGTGGAACGTTCTCACTCTTCCAAGAAGCCAGGCTAGCAGCTCCCCCACCCCAGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS TCA 72 bp ACCGCGGGTCCATCCCCATCTCGTCGCAGGGCGACGTaGGAACAATCCCTCCTTTGTGTACACACCACCCAA +
Preference number: 6 (lower is better)
Translates to: TAGPSPSRRRAT*EQSLLCVHTTQ
Trigger: TTGGGTGGTGTGTACACAAAGGAGGGATTGTTCTCACGTCGCCCTGCGACGAGATGGGGATGGACCCGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS GCA 72 bp ACGCAGCGGCATGACTCTCGGATCTCACCAGCCTCTTaGCCTTCAGTTTCAAATGCAGGCCACGGACGCTGC +
Preference number: 6 (lower is better)
Translates to: TQRHDSRISPAS*PSVSNAGHGRC
Trigger: GCAGCGTCCGTGGCCTGCATTTGAAACTGAAGGGCAAGAGGCTGGTGAGATCCGAGAGTCATGCCGCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000409212.5
ENST00000444916.5
ENST00000489601.1
CDS GCA 72 bp TCTGAAGAAGGGGTTGTCCCGCCTGACCGGCGGCTCTaGGTGGAGTCCGTTTGTGACTGGAAGCTCATCGAA +
Preference number: 6 (lower is better)
Translates to: SEEGVVPPDRRL*VESVCDWKLIE
Trigger: TTCGATGAGCTTCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCTTCTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp AAGAAGGGGTTGTCCCGCCTGACCGGCGGCTCTGCGTaGAGTCCGTTTGTGACTGGAAGCTCATCGAAGATG +
Preference number: 6 (lower is better)
Translates to: KKGLSRLTGGSA*SPFVTGSSSKM
Trigger: CATCTTCGATGAGCTTCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGGCGGGACAACCCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp AAGTCCAGGTCGTGGCAAGACCGGGCCAGCTTCCTGTaGTTTAGCCAGGCAGTTCGAAAATCCTCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: KSRSWQDRASFL*FSQAVRKSSRL
Trigger: GAGCCGGGAGGATTTTCGAACTGCCTGGCTAAACCACAGGAAGCTGGCCCGGTCTTGCCACGACCTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GATGAAGTCCCACACGGTGGAAGGGTAGAGGATGCTTaGGCCATGGGCCACGACAGCCACGTACATACAGGG +
Preference number: 6 (lower is better)
Translates to: DEVPHGGRVEDA*AMGHDSHVHTG
Trigger: CCCTGTATGTACGTGGCTGTCGTGGCCCATGGCCCAAGCATCCTCTACCCTTCCACCGTGTGGGACTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp CTCCAGAGGTTCAGCATGTTCCTCCACGCAGCGGCATaGCTCTCGGATCTCACCAGCCTCTTGCCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LQRFSMFLHAAA*LSDLTSLLPFS
Trigger: ACTGAAGGGCAAGAGGCTGGTGAGATCCGAGAGTCATGCCGCTGCGTGGAGGAACATGCTGAACCTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000409212.5
ENST00000444916.5
ENST00000489601.1
CDS TCA 72 bp CCATTCAAATCACGAAGTCGTCCTGGTCCGCAGGGCTaGAGGCGGCTGCTCTCAGAACGTCCAGGGAGTTCA +
Preference number: 6 (lower is better)
Translates to: PFKSRSRPGPQG*RRLLSERPGSS
Trigger: TGAACTCCCTGGACGTTCTGAGAGCAGCCGCCTTCAGCCCTGCGGACCAGGACGACTTCGTGATTTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp CTTGTTGTAGCATCCAGTTACTTGTGGCCATGGGACTaGGGCTTCAACTGCATGCTGGCTGCCGGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LVVASSYLWPWD*GFNCMLAAGGG
Trigger: GCCTCCCCCGGCAGCCAGCATGCAGTTGAAGCCTCAGTCCCATGGCCACAAGTAACTGGATGCTACAACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS GCA 72 bp TCGGATCTCACCAGCCTCTTGCCCTTCAGTTTCAAATaGAGGCCACGGACGCTGCACGACTCGGTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SDLTSLLPFSFK*RPRTLHDSVSL
Trigger: GAGAGAGACCGAGTCGTGCAGCGTCCGTGGCCTGCATTTGAAACTGAAGGGCAAGAGGCTGGTGAGATCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000409212.5
ENST00000444916.5
ENST00000489601.1
CDS CCA 72 bp GCTGCACATAGGAGGAGGGGATGTAGCCCATTTCGGTaGTGTTGTGTGCGTACCACCACTCACCGCCAGATG +
Preference number: 6 (lower is better)
Translates to: AAHRRRGCSPFR*CCVRTTTHRQM
Trigger: CATCTGGCGGTGAGTGGTGGTACGCACACAACACCACCGAAATGGGCTACATCCCCTCCTCCTATGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000416021.5
ENST00000446904.5
CDS CCA 72 bp TGCCTGGCGTGTGACCTCGCTGACCAGGAGCGTCTTTaGGGCACAGTCATGCCCAAAAATGGTCACTACCGT +
Preference number: 6 (lower is better)
Translates to: CLACDLADQERL*GTVMPKNGHYR
Trigger: ACGGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTCAGCGAGGTCACACGCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp TTCTGGGAGGTGATGGGGAAGATCAGGCGGCTCACCTaGCCCAGCTTCAGCTGGAATCCTCGCACCACTTTG +
Preference number: 6 (lower is better)
Translates to: FWEVMGKIRRLT*PSFSWNPRTTL
Trigger: CAAAGTGGTGCGAGGATTCCAGCTGAAGCTGGGCAAGGTGAGCCGCCTGATCTTCCCCATCACCTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp TTCTGCCGCACCACAGTCTTGAGCAACTTACCAAACTaGAGGCTGGACACCGGGCGGTCCTGGAAAGTCGGG +
Preference number: 6 (lower is better)
Translates to: FCRTTVLSNLPN*RLDTGRSWKVG
Trigger: CCCGACTTTCCAGGACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGCTCAAGACTGTGGTGCGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 90 bp CAAGCCGGTGAAGAAACTCGACGATGTGGGAGCATCGGACTTGGCTaGGAGGACGGAGAGTTCCGAGAGACTGTAGGAGCGCTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: QAGEETRRCGSIGLG*EDGEFRETVGALAS
Trigger: AGAAGCAAGCGCTCCTACAGTCTCTCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCACATCGTCGAGTTTCTTCACCGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp CATCCCGGTAGCTGTCCCCGATCTGATGGCTCCAGGTaGGTAAGAAGTCATACGCAGGCTTCCACATGGCCT +
Preference number: 6 (lower is better)
Translates to: HPGSCPRSDGSR*VRSHTQASTWP
Trigger: AGGCCATGTGGAAGCCTGCGTATGACTTCTTACTCACCTGGAGCCATCAGATCGGGGACAGCTACCGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp CTCTCCTCGCCAAACCAAATGCAAAAGCCTCCAGCCTaGCCTGGAGGTAGAGCCGTTCCTCCAGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: LSSPNQMQKPPA*PGGRAVPPEVQ
Trigger: CTGAACCTCTGGAGGAACGGCTCTACCTCCAGGTCAGGCTGGAGGCTTTTGCATTTGGTTTGGCGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS CCA 72 bp CCTGACCGGCGGCTCTGCGTGGAGTCCGTTTGTGACTaGAAGCTCATCGAAGATGTTGCCAGTGCTATTCGT +
Preference number: 6 (lower is better)
Translates to: PDRRLCVESVCD*KLIEDVASAIR
Trigger: ACGAATAGCACTGGCAACATCTTCGATGAGCTTCCAGTCACAAACGGACTCCACGCAGAGCCGCCGGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GCCTGGCTTCTTGGAAGAGTGAGAACGTTCCACGGGTaGCAACAGAAAGTGGATTCGCTGGTACAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: AWLLGRVRTFHG*QQKVDSLVQPQ
Trigger: CTGCGGCTGTACCAGCGAATCCACTTTCTGTTGCCACCCGTGGAACGTTCTCACTCTTCCAAGAAGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS CAA 72 bp GAAGAAACTCGACGATGTGGGAGCATCGGACTTGGCTaGGAGGACGGAGAGTTCCGAGAGACTGTAGGAGCG +
Preference number: 6 (lower is better)
Translates to: EETRRCGSIGLG*EDGEFRETVGA
Trigger: CGCTCCTACAGTCTCTCGGAACTCTCCGTCCTCCAAGCCAAGTCCGATGCTCCCACATCGTCGAGTTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp AGGTGCTTCCAGCGCTTGGTGATGGGGTTTTTCATCTaGTCCAGGCCCAGGTGCAGCTCCTGGATGACATCC +
Preference number: 6 (lower is better)
Translates to: RCFQRLVMGFFI*SRPRCSSWMTS
Trigger: GGATGTCATCCAGGAGCTGCACCTGGGCCTGGACAAGATGAAAAACCCCATCACCAAGCGCTGGAAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp CAGGGCTCCCCTCCAGGACCTCGAAGCACCCTACTGTaGGGGTGCTTGTCTCTGTTTCAGTTGTCCCTCTTA +
Preference number: 6 (lower is better)
Translates to: QGSPPGPRSTLL*GCLSLFQLSLL
Trigger: TAAGAGGGACAACTGAAACAGAGACAAGCACCCCAACAGTAGGGTGCTTCGAGGTCCTGGAGGGGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409212.5
CDS CAA 72 bp TCACACGGCGCTGACATCACTACAGAGCCGGCGCCTTaGAGAGCAGAACCAGCCAACATCAATGCGACAGAC +
Preference number: 6 (lower is better)
Translates to: SHGADITTEPAP*RAEPANINATD
Trigger: GTCTGTCGCATTGATGTTGGCTGGTTCTGCTCTCAAAGGCGCCGGCTCTGTAGTGATGTCAGCGCCGTGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493436.5
CDS CAA 90 bp GGCTCTGCGTGGAGTCCGTTTGTGACTGGAAGCTCATCGAAGATGTaGCCAGTGCTATTCGTGGTGGCTGAGCTGGATTCGGTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: GSAWSPFVTGSSSKM*PVLFVVAELDSVKE
Trigger: CTCCTTCACCGAATCCAGCTCAGCCACCACGAATAGCACTGGCAACATCTTCGATGAGCTTCCAGTCACAAACGGACTCCACGCAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp TGGTTTAGCCAGGCAGTTCGAAAATCCTCCCGGCTCTaGAATTGCTCGGGGGCAGGTGATTTCAAGCCGGTG +
Preference number: 6 (lower is better)
Translates to: WFSQAVRKSSRL*NCSGAGDFKPV
Trigger: CACCGGCTTGAAATCACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTTTCGAACTGCCTGGCTAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp GAGAGAAGGGAGACGCTCCATCCCGAAAGTCAGTCGTaGCTTCACCTCACATTCCGCCAGAAACCGACTGCA +
Preference number: 6 (lower is better)
Translates to: ERRETLHPESQS*LHLTFRQKPTA
Trigger: TGCAGTCGGTTTCTGGCGGAATGTGAGGTGAAGTCACGACTGACTTTCGGGATGGAGCGTCTCCCTTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446904.5
CDS GCA 72 bp ACCTCGCTGACCAGGAGCGTCTTTGGGGCACAGTCATaGCCAAAAATGGTCACTACCGTCTTGAAGGATGGG +
Preference number: 6 (lower is better)
Translates to: TSLTRSVFGAQS*PKMVTTVLKDG
Trigger: CCCATCCTTCAAGACGGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAAGACGCTCCTGGTCAGCGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp AACTTACCAAACTTGAGGCTGGACACCGGGCGGTCCTaGAAAGTCGGGTACTTTGTAGTGGTGGCAAACGGG +
Preference number: 6 (lower is better)
Translates to: NLPNLRLDTGRS*KVGYFVVVANG
Trigger: CCCGTTTGCCACCACTACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp ACCAAGATCAGAGTCCCAGTGAGGTGCTTCCAGCGCTaGGTGATGGGGTTTTTCATCTTGTCCAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: TKIRVPVRCFQR*VMGFFILSRPR
Trigger: CCTGGGCCTGGACAAGATGAAAAACCCCATCACCAAGCGCTGGAAGCACCTCACTGGGACTCTGATCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp CTCATCGAAGATGTTGCCAGTGCTATTCGTGGTGGCTaGGCTGGATTCGGTGAAGGAGGATGTACCTGCGTC +
Preference number: 6 (lower is better)
Translates to: LIEDVASAIRGG*AGFGEGGCTCV
Trigger: GACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAGCCACCACGAATAGCACTGGCAACATCTTCGATGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp TCTGAAATTGCTCGGGGGCAGGTGATTTCAAGCCGGTaGAGAAACTCGACGATGTGGGAGCATCGGACTTGG +
Preference number: 6 (lower is better)
Translates to: SEIARGQVISSR*RNSTMWEHRTW
Trigger: CCAAGTCCGATGCTCCCACATCGTCGAGTTTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAATTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp AAAATCCTCCCGGCTCTGAAATTGCTCGGGGGCAGGTaGTTTCAAGCCGGTGAAGAAACTCGACGATGTGGG +
Preference number: 6 (lower is better)
Translates to: KILPALKLLGGR*FQAGEETRRCG
Trigger: CCCACATCGTCGAGTTTCTTCACCGGCTTGAAATCACCTGCCCCCGAGCAATTTCAGAGCCGGGAGGATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 72 bp CAGGAGGTGTGGATCACTGAAGGCCATCTCAGAGTCTaGCAGCCACAAAAGATACTGGAGGTAGAGCCGTTC +
Preference number: 6 (lower is better)
Translates to: QEVWITEGHLRV*QPQKILEVEPF
Trigger: GAACGGCTCTACCTCCAGTATCTTTTGTGGCTGGCAGACTCTGAGATGGCCTTCAGTGATCCACACCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CCA 72 bp CCAGGAGAGAAGGGAGACGCCATATGCCAATGCAGGTaGACAGACGGGAACTCAGAGCTTCTCAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: PGEKGDAICQCR*TDGNSELLKHK
Trigger: TTTGTGCTTGAGAAGCTCTGAGTTCCCGTCTGTCCACCTGCATTGGCATATGGCGTCTCCCTTCTCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462602.6
CDS CAA 90 bp TGGTTCTTGTTCTGCCGCACCACAGTCTTGAGCAACTTACCAAACTaGAGGCTGGACACCGGGCGGTCCTGGAAAGTCGGGTACTTTGTA +
Preference number: 6 (lower is better)
Translates to: WFLFCRTTVLSNLPN*RLDTGRSWKVGYFV
Trigger: TACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTCCAGCCTCAAGTTTGGTAAGTTGCTCAAGACTGTGGTGCGGCAGAACAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS GCA 72 bp TCCAGGGAGTTCACCAAGATCAGAGTCCCAGTGAGGTaGTTCCAGCGCTTGGTGATGGGGTTTTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: SREFTKIRVPVR*FQRLVMGFFIL
Trigger: CAAGATGAAAAACCCCATCACCAAGCGCTGGAAGCACCTCACTGGGACTCTGATCTTGGTGAACTCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp CAGCTCCAGCTCCTTGGCTACCTCGTCTGGGCTGTCTaGAAGATTATCAATCATACCGCTGTCACTCAGTGT +
Preference number: 6 (lower is better)
Translates to: QLQLLGYLVWAV*KIINHTAVTQC
Trigger: ACACTGAGTGACAGCGGTATGATTGATAATCTTCCAGACAGCCCAGACGAGGTAGCCAAGGAGCTGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000446904.5
CDS CCA 72 bp CAGGCTGGGCATGACGGGCACGTTCCCATTCAGAAATaGATTGGTCTGGACCCCATTCCAGAAAGGGTTATT +
Preference number: 6 (lower is better)
Translates to: QAGHDGHVPIQK*IGLDPIPERVI
Trigger: AATAACCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCATGCCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp GTACCTGCGTCAAAAAGGAGCAAATCCACAGTACTTTaGGGATTCAGCTCATCCAGGCTGGGCATGACGGGC +
Preference number: 6 (lower is better)
Translates to: VPASKRSKSTVL*GFSSSRLGMTG
Trigger: GCCCGTCATGCCCAGCCTGGATGAGCTGAATCCCAAAAGTACTGTGGATTTGCTCCTTTTTGACGCAGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp TGGAGTCCGTTTGTGACTGGAAGCTCATCGAAGATGTaGCCAGTGCTATTCGTGGTGGCTGAGCTGGATTCG +
Preference number: 6 (lower is better)
Translates to: WSPFVTGSSSKM*PVLFVVAELDS
Trigger: CGAATCCAGCTCAGCCACCACGAATAGCACTGGCAACATCTTCGATGAGCTTCCAGTCACAAACGGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp CATCAACTTGGATGCATCCTACTGGTTAGAAGCAAGTaGCTAGCTCGGCTCACGCCAAAGGGAGGGGACTTC +
Preference number: 6 (lower is better)
Translates to: HQLGCILLVRSK*LARLTPKGGDF
Trigger: GAAGTCCCCTCCCTTTGGCGTGAGCCGAGCTAGCAACTTGCTTCTAACCAGTAGGATGCATCCAAGTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CAA 90 bp AAGGAGGATGTACCTGCGTCAAAAAGGAGCAAATCCACAGTACTTTaGGGATTCAGCTCATCCAGGCTGGGCATGACGGGCACGTTCCCA +
Preference number: 6 (lower is better)
Translates to: KEDVPASKRSKSTVL*GFSSSRLGMTGTFP
Trigger: TGGGAACGTGCCCGTCATGCCCAGCCTGGATGAGCTGAATCCCAAAAGTACTGTGGATTTGCTCCTTTTTGACGCAGGTACATCCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 90 bp CTGGGCTGTCTGGAAGATTATCAATCATACCGCTGTCACTCAGTGTaGAGTTCCGGTAGTTCAAGGGCTGCACATAGGAGGAGGGGATGT +
Preference number: 6 (lower is better)
Translates to: LGCLEDYQSYRCHSV*SSGSSRAAHRRRGC
Trigger: ACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAACACTGAGTGACAGCGGTATGATTGATAATCTTCCAGACAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000446904.5
CDS CAA 90 bp ATCACAAGCTCCTTCTGGAAGGACTTCCGTTCTTTGTTCTCAGTGTaGTTACAGTCCTCCTTCAGCTTTTCTAGGACGGACGCCACCCGC +
Preference number: 6 (lower is better)
Translates to: ITSSFWKDFRSLFSV*LQSSFSFSRTDATR
Trigger: GCGGGTGGCGTCCGTCCTAGAAAAGCTGAAGGAGGACTGTAACAACACTGAGAACAAAGAACGGAAGTCCTTCCAGAAGGAGCTTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp TGCCAGTGCTATTCGTGGTGGCTGAGCTGGATTCGGTaGAGGAGGATGTACCTGCGTCAAAAAGGAGCAAAT +
Preference number: 6 (lower is better)
Translates to: CQCYSWWLSWIR*RRMYLRQKGAN
Trigger: ATTTGCTCCTTTTTGACGCAGGTACATCCTCCTTCACCGAATCCAGCTCAGCCACCACGAATAGCACTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp ACATATGGCCCTTCCTTCGAGTCGCTCCTCAGGCACTaGAGGCCCACTGTGCTTTTGCTAAAAAGGTCATTT +
Preference number: 6 (lower is better)
Translates to: TYGPSFESLLRH*RPTVLLLKRSF
Trigger: AAATGACCTTTTTAGCAAAAGCACAGTGGGCCTCCAGTGCCTGAGGAGCGACTCGAAGGAAGGGCCATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp GTCATGCCCAAAAATGGTCACTACCGTCTTGAAGGATaGGTGGATGTGTTTAGGGCCGTAGAGACCCACTGT +
Preference number: 6 (lower is better)
Translates to: VMPKNGHYRLEG*VDVFRAVETHC
Trigger: ACAGTGGGTCTCTACGGCCCTAAACACATCCACCCATCCTTCAAGACGGTAGTGACCATTTTTGGGCATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp CTGGGCATGACGGGCACGTTCCCATTCAGAAATGGATaGGTCTGGACCCCATTCCAGAAAGGGTTATTACTG +
Preference number: 6 (lower is better)
Translates to: LGMTGTFPFRNG*VWTPFQKGLLL
Trigger: CAGTAATAACCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCATGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 90 bp TCATCCAGGCTGGGCATGACGGGCACGTTCCCATTCAGAAATGGATaGGTCTGGACCCCATTCCAGAAAGGGTTATTACTGTACATTCTG +
Preference number: 6 (lower is better)
Translates to: SSRLGMTGTFPFRNG*VWTPFQKGLLLYIL
Trigger: CAGAATGTACAGTAATAACCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCATGCCCAGCCTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS TCA 72 bp TTCTCAAGCACAAATCTCCATCCCGAAAGTCAGTCGTaGCTTCACCTCACATTCCGCCAGAAACCGACTGCA +
Preference number: 6 (lower is better)
Translates to: FSSTNLHPESQS*LHLTFRQKPTA
Trigger: TGCAGTCGGTTTCTGGCGGAATGTGAGGTGAAGTCACGACTGACTTTCGGGATGGAGATTTGTGCTTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462602.6
CDS GCA 72 bp TGTAATCACGGGAGGAAGGCACAGCATCAACTTGGATaGATCCTACTGGTTAGAAGCAAGTTGCTAGCTCGG +
Preference number: 6 (lower is better)
Translates to: CNHGRKAQHQLG*ILLVRSKLLAR
Trigger: CCGAGCTAGCAACTTGCTTCTAACCAGTAGGATGCATCCAAGTTGATGCTGTGCCTTCCTCCCGTGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489601.1
CDS CAA 90 bp TCAGTCGTGACTTCACCTCACATTCCGCCAGAAACCGACTGCAGATaGTTACCAAAGAATCCTTGTGCAAACAAACACCAGCCAACTGCG +
Preference number: 6 (lower is better)
Translates to: SVVTSPHIPPETDCR*LPKNPCANKHQPTA
Trigger: CGCAGTTGGCTGGTGTTTGTTTGCACAAGGATTCTTTGGTAACAATCTGCAGTCGGTTTCTGGCGGAATGTGAGGTGAAGTCACGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446904.5
CDS TCA 72 bp GGAATCCTCGCACCACTTTGGCCTGCTCGCTGGCTTTaGCCTCGTAATTCGTCATATTGGAAAACATACAGA +
Preference number: 6 (lower is better)
Translates to: GILAPLWPARWL*PRNSSYWKTYR
Trigger: TCTGTATGTTTTCCAATATGACGAATTACGAGGTCAAAGCCAGCGAGCAGGCCAAAGTGGTGCGAGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp CTGGAAGATTATCAATCATACCGCTGTCACTCAGTGTaGAGTTCCGGTAGTTCAAGGGCTGCACATAGGAGG +
Preference number: 6 (lower is better)
Translates to: LEDYQSYRCHSV*SSGSSRAAHRR
Trigger: CCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAACACTGAGTGACAGCGGTATGATTGATAATCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000446904.5
CDS TCA 72 bp TGGAAGATTATCAATCATACCGCTGTCACTCAGTGTTaGGTTCCGGTAGTTCAAGGGCTGCACATAGGAGGA +
Preference number: 6 (lower is better)
Translates to: WKIINHTAVTQC*VPVVQGLHIGG
Trigger: TCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAACACTGAGTGACAGCGGTATGATTGATAATCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
ENST00000446904.5
CDS CCA 72 bp CAGTCCATCTTCAGTAGGGCCATCACAAGCTCCTTCTaGAAGGACTTCCGTTCTTTGTTCTCAGTGTTGTTA +
Preference number: 6 (lower is better)
Translates to: QSIFSRAITSSF*KDFRSLFSVLL
Trigger: TAACAACACTGAGAACAAAGAACGGAAGTCCTTCCAGAAGGAGCTTGTGATGGCCCTACTGAAGATGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp TCCTTCTGGAAGGACTTCCGTTCTTTGTTCTCAGTGTaGTTACAGTCCTCCTTCAGCTTTTCTAGGACGGAC +
Preference number: 6 (lower is better)
Translates to: SFWKDFRSLFSV*LQSSFSFSRTD
Trigger: GTCCGTCCTAGAAAAGCTGAAGGAGGACTGTAACAACACTGAGAACAAAGAACGGAAGTCCTTCCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CCA 72 bp ATGACGGGCACGTTCCCATTCAGAAATGGATTGGTCTaGACCCCATTCCAGAAAGGGTTATTACTGTACATT +
Preference number: 6 (lower is better)
Translates to: MTGTFPFRNGLV*TPFQKGLLLYI
Trigger: AATGTACAGTAATAACCCTTTCTGGAATGGGGTCCAGACCAATCCATTTCTGAATGGGAACGTGCCCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344528.8
ENST00000392011.7
ENST00000409212.5
CDS CAA 72 bp ACGGATAAATTCTATAGTTCCAATCTGCCTACTAACTaGGAAAGAATAAGCAGGAATACAATCTCGCACAGT +
Preference number: 6 (lower is better)
Translates to: TDKFYSSNLPTN*ERISRNTISHS
Trigger: ACTGTGCGAGATTGTATTCCTGCTTATTCTTTCCAAGTTAGTAGGCAGATTGGAACTATAGAATTTATCCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484097.1