RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3BP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000087266

Ensembl transcript IDs: ENST00000356331.9, ENST00000435136.8, ENST00000452765.7, ENST00000502260.5, ENST00000503219.5, ENST00000503393.8, ENST00000504294.5, ENST00000504450.1, ENST00000505941.5, ENST00000506932.1, ENST00000508338.1, ENST00000508385.5, ENST00000509677.5, ENST00000510074.5, ENST00000510193.1, ENST00000510204.5, ENST00000511185.5, ENST00000511237.5, ENST00000511663.5, ENST00000511747.6, ENST00000512014.5, ENST00000512131.5, ENST00000513020.5, ENST00000513069.1, ENST00000513095.5, ENST00000515183.5, ENST00000515737.5, ENST00000515802.5

Found 1398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCTGCGGCTTCTCTGGCCTGGGCAGGACTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCTTCAGCGCAGGAGGCCGGGGAGCCA +
Preference number: 1 (lower is better)
Translates to: GAAASLAWAGLRAAP*PQALAASAQEAGEP
Trigger: TGGCTCCCCGGCCTCCTGCGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCAGAGAAGCCGCAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR GCA 90 bp TCGCTGGAGGTGCGGGAGCTGCGGCTTCTCTGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTCAGGCACTGGCAGCTTCAGCGCAGG +
Preference number: 1 (lower is better)
Translates to: SLEVRELRLLWPGQD*GPRHGLRHWQLQRR
Trigger: CCTGCGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCAGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 90 bp GGCCCGGGGCATGTCAGAGAAGGCTGGCTTCCTGGGCGTGGGCACTaGGGGTGGTGGGTAAGCCGGTGGGTGCATCAGGGCATCCTCAAG +
Preference number: 1 (lower is better)
Translates to: GPGHVREGWLPGRGH*GWWVSRWVHQGILK
Trigger: CTTGAGGATGCCCTGATGCACCCACCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATGCCCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 90 bp AGGAGTGGGCCCGGGGCATGTCAGAGAAGGCTGGCTTCCTGGGCGTaGGCACTGGGGGTGGTGGGTAAGCCGGTGGGTGCATCAGGGCAT +
Preference number: 1 (lower is better)
Translates to: RSGPGACQRRLASWA*ALGVVGKPVGASGH
Trigger: ATGCCCTGATGCACCCACCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATGCCCCGGGCCCACTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 90 bp GCCCTTGGAGGTAAAGGAGTGGGCCCGGGGCATGTCAGAGAAGGCTaGCTTCCTGGGCGTGGGCACTGGGGGTGGTGGGTAAGCCGGTGG +
Preference number: 1 (lower is better)
Translates to: ALGGKGVGPGHVREG*LPGRGHWGWWVSRW
Trigger: CCACCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR GCA 90 bp CGGCCTAGAGCAGCTCACACAGACGTGGACAGCTGTGCTAGCAGGTaGAGAGTCTGGGAGGCGAGGCTGGACCAGGGCCCCAGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: RPRAAHTDVDSCASR*RVWEARLDQGPSWA
Trigger: AGCCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCTGTCCACGTCTGTGTGAGCTGCTCTAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GGTAGCAGGTACCCTGGGGCAAGGCTCAGCCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTCAGCAGCCAGGCCAACATCTGGGAG +
Preference number: 1 (lower is better)
Translates to: GSRYPGARLSPPRAQ*VPLGVLSSQANIWE
Trigger: CTCCCAGATGTTGGCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGGGCTGAGCCTTGCCCCAGGGTACCTGCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR GCA 90 bp CCTGCAGAGGTGGCCTTGGACACCTGGTTCCTGGAAGCAGCTGGCTaGCGTCATCTGCAGGGCCTGCAGTTCCACCGCACCCTATGGCCC +
Preference number: 1 (lower is better)
Translates to: PAEVALDTWFLEAAG*RHLQGLQFHRTLWP
Trigger: GGGCCATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp AGCAGGTGCAGAGTCTGGGAGGCGAGGCTGGACCAGGGCCCCAGCTaGGCTTCGGGTAACCACAGGCCTCAACTGTCCAGTTGGCCAGAG +
Preference number: 1 (lower is better)
Translates to: SRCRVWEARLDQGPS*ASGNHRPQLSSWPE
Trigger: CTCTGGCCAACTGGACAGTTGAGGCCTGTGGTTACCCGAAGCCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GCAGCTCACACAGACGTGGACAGCTGTGCTAGCAGGTGCAGAGTCTaGGAGGCGAGGCTGGACCAGGGCCCCAGCTGGGCTTCGGGTAAC +
Preference number: 1 (lower is better)
Translates to: AAHTDVDSCASRCRV*EARLDQGPSWASGN
Trigger: GTTACCCGAAGCCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCTGTCCACGTCTGTGTGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp CTGTGCCGTAAGCACCTCATACCCAGCTGTCCCCAGACTGGGCTGTaGACTCAGCCAGGCCAGAGGCCCCTGTCTGGAATGGGACCAGGC +
Preference number: 1 (lower is better)
Translates to: LCRKHLIPSCPQTGL*TQPGQRPLSGMGPG
Trigger: GCCTGGTCCCATTCCAGACAGGGGCCTCTGGCCTGGCTGAGTTCACAGCCCAGTCTGGGGACAGCTGGGTATGAGGTGCTTACGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp CAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGTaGAGCTGGAAACTGATCCCGGCCTGGGAGGACCCTGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: QLMAHHWIEPSPGHA*SWKLIPAWEDPGAG
Trigger: CCCTGCTCCAGGGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR GCA 90 bp AGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATaGGTGAAGCTGGAAACTGATCCCGGCCTGGGAGGACCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: RAAHGPSLDRAQPRT*VKLETDPGLGGPWS
Trigger: GCTCCAGGGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR CCA 90 bp AACCCCTGCAGAGGTGGCCTTGGACACCTGGTTCCTGGAAGCAGCTaGCTGCCGTCATCTGCAGGGCCTGCAGTTCCACCGCACCCTATG +
Preference number: 1 (lower is better)
Translates to: NPCRGGLGHLVPGSS*LPSSAGPAVPPHPM
Trigger: CATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp AGGCAGGCTGAAGAGGAAACCCCTGCAGAGGTGGCCTTGGACACCTaGTTCCTGGAAGCAGCTGGCTGCCGTCATCTGCAGGGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: RQAEEETPAEVALDT*FLEAAGCRHLQGLQ
Trigger: CTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTTCCTCTTCAGCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 90 bp GAGGCAGCAGAACTGGTGAGTGGGGTGTGGGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGATCTGTTACTCGCTGTGCACCCTGGG +
Preference number: 1 (lower is better)
Translates to: EAAELVSGVWAPSPD*PSLGPDLLLAVHPG
Trigger: CCCAGGGTGCACAGCGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGCCCACACCCCACTCACCAGTTCTGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 90 bp GGCTCTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATaGTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAACT +
Preference number: 1 (lower is better)
Translates to: GSGGWAARGCGSAPP*CPHSQTGPRPPGRT
Trigger: AGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR GCA 90 bp GTCCGTGGGGTACGGGGAAAGGCTGATATCCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGTGTCCGAGCTGGAGTCGCTGGTGTC +
Preference number: 1 (lower is better)
Translates to: VRGVRGKADIHRPLN*AVEAVCVRAGVAGV
Trigger: GACACCAGCGACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACCCCACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 90 bp CTGAAGAGGAAACCCCTGCAGAGGTGGCCTTGGACACCTGGTTCCTaGAAGCAGCTGGCTGCCGTCATCTGCAGGGCCTGCAGTTCCACC +
Preference number: 1 (lower is better)
Translates to: LKRKPLQRWPWTPGS*KQLAAVICRACSST
Trigger: GGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTTCCTCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp AGGCCTCAACTGTCCAGTTGGCCAGAGGGACCTATCACCTGGCTCTaGGCCCCAGGATGCTTTAGCCACTTGAGCCGGCTCCAGGTGACC +
Preference number: 1 (lower is better)
Translates to: RPQLSSWPEGPITWL*APGCFSHLSRLQVT
Trigger: GGTCACCTGGAGCCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAGCCAGGTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp AGAACAACAGAAGCTCCCTGTGCTCCAGCCTCGGCTGTGGTGCACTaGCCTCTCACCCCAGGCAGGCTGAAGAGGAAACCCCTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: RTTEAPCAPASAVVH*PLTPGRLKRKPLQR
Trigger: CCTCTGCAGGGGTTTCCTCTTCAGCCTGCCTGGGGTGAGAGGTCAGTGCACCACAGCCGAGGCTGGAGCACAGGGAGCTTCTGTTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTaGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGAT +
Preference number: 1 (lower is better)
Translates to: GTGQVSVGQQSPFVL*SLAPGSALEPNLLD
Trigger: ATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR CCA 90 bp CAAGGCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTTCCTGGGGGTCCCAGGGCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: QGKAHCCFIGGNSPY*SLCLSVPGGPRASP
Trigger: GGGGCTGGCCCTGGGACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp AACCACAGGCCTCAACTGTCCAGTTGGCCAGAGGGACCTATCACCTaGCTCTGGGCCCCAGGATGCTTTAGCCACTTGAGCCGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: NHRPQLSSWPEGPIT*LWAPGCFSHLSRLQ
Trigger: CTGGAGCCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAGCCAGGTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGGCCTGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp CGGGCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCC +
Preference number: 1 (lower is better)
Translates to: RAHLVSKGRSFFSWK*PISLRSKAIQLLRS
Trigger: GGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR CCA 90 bp TGGGCCCGGGCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTG +
Preference number: 1 (lower is better)
Translates to: WARAHLVSKGRSFFS*KWPISLRSKAIQLL
Trigger: CAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGCCCGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR GCA 90 bp GCAAGTCTCGGGAGGTCATGGGAACTCCTCATGGCTCCTTCTTCATaGTGGAGGACCACGGCCTGCCCCATCCCACCCCAACACACTCTT +
Preference number: 1 (lower is better)
Translates to: ASLGRSWELLMAPSS*WRTTACPIPPQHTL
Trigger: AAGAGTGTGTTGGGGTGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAG +
Preference number: 1 (lower is better)
Translates to: APGSALEPNLLDETG*VLRDVHHRGPRQAQ
Trigger: CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR CCA 90 bp GGGGACCAGTGTTCCTGTCCTTGGAGCCCAGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAG +
Preference number: 1 (lower is better)
Translates to: GDQCSCPWSPGTAWS*VSGIGTGQVSVGQQ
Trigger: CTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR CCA 90 bp CTGGAGTCGCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCC +
Preference number: 1 (lower is better)
Translates to: LESLVSKGRSFFSWK*PISLRSKAIQLLRS
Trigger: GGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGCGACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 90 bp TGTTCCTGGTGTGACCCTGGTGTCCTAGGCCATCCCTCCAGCGCCTaGATCACCCTCAAAAGCCTCTTCCCTGCTGAGCTTCAATCTGCC +
Preference number: 1 (lower is better)
Translates to: CSWCDPGVLGHPSSA*ITLKSLFPAELQSA
Trigger: GGCAGATTGAAGCTCAGCAGGGAAGAGGCTTTTGAGGGTGATCCAGGCGCTGGAGGGATGGCCTAGGACACCAGGGTCACACCAGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp TCCGAGCTGGAGTCGCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTG +
Preference number: 1 (lower is better)
Translates to: SELESLVSKGRSFFS*KWPISLRSKAIQLL
Trigger: CAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR TCA 90 bp TGGAACTCCATGGCAGAAAGTAAGGGGATGGATTGGGGCTGGGCCTaGGCCAGGTATTGCCTGGAAGACTTGGGCATCTGGGTACCACCG +
Preference number: 1 (lower is better)
Translates to: WNSMAESKGMDWGWA*ARYCLEDLGIWVPP
Trigger: CGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAATACCTGGCTCAGGCCCAGCCCCAATCCATCCCCTTACTTTCTGCCATGGAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 90 bp CCAGCCCAGACTGCCCAAGTTTGGGTCCTGATCTGTTACTCGCTGTaGACCCTGGGGAAGTCACTCAGTGACCTGCACCCTGGAAGACAA +
Preference number: 1 (lower is better)
Translates to: PAQTAQVWVLICYSL*TLGKSLSDLHPGRQ
Trigger: TTGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp CTAGAACACTTATGGCAAGTCTCGGGAGGTCATGGGAACTCCTCATaGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAC +
Preference number: 1 (lower is better)
Translates to: LEHLWQVSGGHGNSS*LLLHAGGPRPAPSH
Trigger: GTGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACTTGCCATAAGTGTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp GGTCCTGATCTGTTACTCGCTGTGCACCCTGGGGAAGTCACTCAGTaGCCTGCACCCTGGAAGACAAGACAACCAACTGTTGGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: GPDLLLAVHPGEVTQ*PAPWKTRQPTVGVP
Trigger: GGGAACCCCAACAGTTGGTTGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGTAACAGATCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp CGTCGTGCTCATAGTCTTCATTGTCCGTGGGGTACGGGGAAAGGCTaGTATCCACAGGCCGCTCAACTGCGCCGTAGAAGCTGTCTGTGT +
Preference number: 1 (lower is better)
Translates to: RRAHSLHCPWGTGKG*YPQAAQLRRRSCLC
Trigger: ACACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACCCCACGGACAATGAAGACTATGAGCACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR GCA 90 bp CCTCCTTCCCAATCAAGCCCCAGCCACCAAGGCAAAGCTCACTGCTaGTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGC +
Preference number: 1 (lower is better)
Translates to: PPSQSSPSHQGKAHC*FIGGNSPYWSLCLS
Trigger: GCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCCTTGGTGGCTGGGGCTTGATTGGGAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 90 bp CTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTG +
Preference number: 1 (lower is better)
Translates to: LLRSSSEEAEKNHVR*FLLIWMILKGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR TCA 90 bp ACAAGAACACAAGACTCACATAAGCCAGGGCAGAGAGGCCGGAAGTaGCACTGTGAGGGGAGGGCACTTGGGTGCTGGCAAAACTATTTC +
Preference number: 1 (lower is better)
Translates to: TRTQDSHKPGQRGRK*HCEGRALGCWQNYF
Trigger: GAAATAGTTTTGCCAGCACCCAAGTGCCCTCCCCTCACAGTGTCACTTCCGGCCTCTCTGCCCTGGCTTATGTGAGTCTTGTGTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp CCTTATATGTGGACTAGAACACTTATGGCAAGTCTCGGGAGGTCATaGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCC +
Preference number: 1 (lower is better)
Translates to: PYMWTRTLMASLGRS*ELLMAPSSCWRTTA
Trigger: GGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCCACATATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp TCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATaGATGATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: SEEAEKNHVRCFLLI*MILKGKTLLDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR TCA 90 bp TGGCTGGAAGATGGCTTAAAAGGGTTCACCACTCACACACACTTCTaGGGTGGTGGGGGTTGTCTGTCAAGCATCTTCACAGGGTCACTG +
Preference number: 1 (lower is better)
Translates to: WLEDGLKGFTTHTHF*GGGGCLSSIFTGSL
Trigger: CAGTGACCCTGTGAAGATGCTTGACAGACAACCCCCACCACCTCAGAAGTGTGTGTGAGTGGTGAACCCTTTTAAGCCATCTTCCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GGTCAGACAGGGCAAAGAATTCTGACTGCAGGGAGGAGGAATGGCTaGTTTTCCAGAGATAGATCAGAACAACAGAAGCTCCCTGTGCTC +
Preference number: 1 (lower is better)
Translates to: GQTGQRILTAGRRNG*FSRDRSEQQKLPVL
Trigger: GAGCACAGGGAGCTTCTGTTGTTCTGATCTATCTCTGGAAAACCAGCCATTCCTCCTCCCTGCAGTCAGAATTCTTTGCCCTGTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GCTCTGTACCCATCAAATCTCCCTCCAGTGAGAATGGCTGGAAGATaGCTTAAAAGGGTTCACCACTCACACACACTTCTGAGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: ALYPSNLPPVRMAGR*LKRVHHSHTLLRWW
Trigger: CCACCACCTCAGAAGTGTGTGTGAGTGGTGAACCCTTTTAAGCCATCTTCCAGCCATTCTCACTGGAGGGAGATTTGATGGGTACAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp CCAACTGTCCATCTACAGCAGGCATGTCCAATCTTTTGGCTTCCATaGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACAC +
Preference number: 1 (lower is better)
Translates to: PTVHLQQACPIFWLP*TIPEELSRVTHKIH
Trigger: GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCAAAAGATTGGACATGCCTGCTGTAGATGGACAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp AATGGTAATCCCAACCCTACCCTTATATGTGGACTAGAACACTTATaGCAAGTCTCGGGAGGTCATGGGAACTCCTCATGGCTCCTTCTT +
Preference number: 1 (lower is better)
Translates to: NGNPNPTLICGLEHL*QVSGGHGNSSWLLL
Trigger: AAGAAGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCCACATATAAGGGTAGGGTTGGGATTACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp TCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTaGTCAGTAAATGGTAATCCCAACCCTACCCTTATATGTGGACTA +
Preference number: 1 (lower is better)
Translates to: SKQMMSSTQLGTSQM*SVNGNPNPTLICGL
Trigger: TAGTCCACATATAAGGGTAGGGTTGGGATTACCATTTACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GTCTGCCAAGGATGGGAAGGCAAGGGAATTCTGTTTTACTGCTGGTaGGCACGTAAACTAGAACAATATTTAGAAAGATCTTCATACCCT +
Preference number: 1 (lower is better)
Translates to: VCQGWEGKGILFYCW*ARKLEQYLERSSYP
Trigger: AGGGTATGAAGATCTTTCTAAATATTGTTCTAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCCCTTGCCTTCCCATCCTTGGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp GGAACAGAGGAAAGAATCCAACAACAGATCTACATATGTCATATGTaGACATATGACAGAGGTGGCATTGCAGATGGGCGCAGAAAGTTA +
Preference number: 1 (lower is better)
Translates to: GTEERIQQQIYICHM*TYDRGGIADGRRKL
Trigger: TAACTTTCTGCGCCCATCTGCAATGCCACCTCTGTCATATGTCCACATATGACATATGTAGATCTGTTGTTGGATTCTTTCCTCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp ATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGTATaGTTCAAGGGGATAAAGCACAGAAACAGGAAAATACTGCAATGC +
Preference number: 1 (lower is better)
Translates to: IITSQRSQLPEFASV*FKGIKHRNRKILQC
Trigger: GCATTGCAGTATTTTCCTGTTTCTGTGCTTTATCCCCTTGAATCATACAGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp GGAAAGAATCCAACAACAGATCTACATATGTCATATGTGGACATATaGCAGAGGTGGCATTGCAGATGGGCGCAGAAAGTTAGATTACAA +
Preference number: 1 (lower is better)
Translates to: GKNPTTDLHMSYVDI*QRWHCRWAQKVRLQ
Trigger: TTGTAATCTAACTTTCTGCGCCCATCTGCAATGCCACCTCTGTCATATGTCCACATATGACATATGTAGATCTGTTGTTGGATTCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 90 bp AATGTCTGCCAAGGATGGGAAGGCAAGGGAATTCTGTTTTACTGCTaGTGGGCACGTAAACTAGAACAATATTTAGAAAGATCTTCATAC +
Preference number: 1 (lower is better)
Translates to: NVCQGWEGKGILFYC*WARKLEQYLERSSY
Trigger: GTATGAAGATCTTTCTAAATATTGTTCTAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCCCTTGCCTTCCCATCCTTGGCAGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 90 bp GTTTTTAGCAATGAACATGCACAAACTATACTACGCACAGCAACATaGATAAATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: VFSNEHAQTILRTAT*INLTDIITSQRSQL
Trigger: CAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATTTATTCATGTTGCTGTGCGTAGTATAGTTTGTGCATGTTCATTGCTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR GCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGGAGCCCCCAGTCCCTaGACACCCAGCTGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEGAPSP*TPSCPG
Trigger: TCCAGGGCAGCTGGGTGTGCAGGGACTGGGGGCTCC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTATCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGATCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: ANLPAQQGHPALALLLGGSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...TCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp CTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LVAGQHVGVVVLHHAAHTPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...AGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAATTCCACCGCACCCTATaGCCCCCTGGGGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREFHRTL*PPGVTA
Trigger: GGCTGTGACCCCAGGGGGCCATAGGGTGCGGTGGAA...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATCTGGGAGGCGAGGCTaGACCAGGGCCCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPSGRRG*TRAPAG
Trigger: CCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGGAGGGCAACGCAGGGTaGGGCGGGGCAGTTTCACTC +
Preference number: 2 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLEGNAG*GGAVSL
Trigger: GAGTGAAACTGCCCCGCCTCACCCTGCGTTGCCCTC...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGCCCAGCGAGGGGCTTaGTGCTGCTGGGTCACAGAA +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREAQRGA*CCWVTE
Trigger: TTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAATCGCCCATCCTGAGGTaGAGGAAGCACCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWRESPILR*RKHLPG
Trigger: CCCAGGGAGGTGCTTCCTGCACCTCAGGATGGGCGA...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTATCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: ALAWQPHGLPSPRPSVAVSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...TACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTACCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: ALAWQPHGLPSPRPSVAVPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...TACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCTTCCACCGCACCCTATaGCCCCCTGGGGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSFHRTL*PPGVTA
Trigger: GGCTGTGACCCCAGGGGGCCATAGGGTGCGGTGGAA...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGCTCCTTCTTCATGCTaGAGGACCACGGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREAPSSC*RTTACP
Trigger: GGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CAA 90 bp GCAGAGATAAGGCAGGGGGTGTGTGCGAGGTGCCCAGCGAGGGGCTaGATGCTGCTGGGTCACAGAAACAGAGGTTGTGGCCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: AEIRQGVCARCPARG*MLLGHRNRGCGPSP
Trigger: GGGGGAAGGGCCACAACCTCTGTTTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCACCTCGCACACACCCCCTGCCTTATCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAGGCAGCAGAACTGGTaGGTGGGGTGTGGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLRQQNW*VGCGLP
Trigger: TGGGAGCCCACACCCCACTCACCAGTTCTGCTGCCT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGGCAGAGGTGGGACTTaGACCCAGGCCTCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREGRGGT*TQASVR
Trigger: TCTCACAGAGGCCTGGGTTCAAGTCCCACCTCTGCC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 2 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCTGGCTGCCGTCATCTaGAGGGCCTGCAGTTCCACC +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSLAAVI*RACSST
Trigger: GGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGCCTCGGCTGTGGTaGACTGACCTCTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSQPRLW*TDLSPQ
Trigger: CTGGGGTGAGAGGTCAGTGCACCACAGCCGAGGCTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp CTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACTGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 2 (lower is better)
Translates to: LVAGQHVGVVVLHHAAHTVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...AGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp AGGGCCCCTGTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: RAPVTALAWQPHGLPSPRAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...CCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCATTAGCCAGGCGTGGTaGCGGGCGCCTGGAATCCCA +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSISQAW*RAPGIP
Trigger: TGGGATTCCAGGCGCCCGCCACCACGCCTGGCTAAT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCAGCAGGTGCAGAGTCTaGGAGGCGAGGCTGGACCAG +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSSRCRV*EARLDQ
Trigger: CTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GTCCCACACAACCAGGACCTTCCCCGACTTGGTAGAGGAGTTCCGGATGCAGTACTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: VPHNQDLPRLGRGVPDAVLRAAP*PQALAA
Trigger: AGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAG...TACTGCATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCTGGTTGTGTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATGCCCTGGCCTGACCTaGGGCAGCAGAACTGGTGAG +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPCPGLT*GSRTGE
Trigger: CTCACCAGTTCTGCTGCCTCAGGTCAGGCCAGGGCA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGGGCAGAGGTGGGACTTaGACCCAGGCCTCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLGRGGT*TQASVR
Trigger: TCTCACAGAGGCCTGGGTTCAAGTCCCACCTCTGCC...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR GCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACTGGCTGCCGTCATCTaGAGGGCCTGCAGTTCCACC +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPLAAVI*RACSST
Trigger: GGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGAGTCCCTTCGTCCTCTaGAGCCTGGCGCCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDESPFVL*SLAPGS
Trigger: TGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAACTCGCTGTGCACCCTaGGGAAGTCACTCAGTGACC +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWRETRCAP*GSHSVT
Trigger: GGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 2 (lower is better)
Translates to: AGSYEMSITEALGKHSLASSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452765.7
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAAAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 2 (lower is better)
Translates to: AQQGHPALALLLGGGREEKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...TTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR GCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 2 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR GCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDERQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGGAGCCCCCAGTCCCTaGACACCCAGCTGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGGAPSP*TPSCPG
Trigger: TCCAGGGCAGCTGGGTGTGCAGGGACTGGGGGCTCC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGTCATCTGCAGGGCCTaGAGTTCCACCGCACCCTAT +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEVICRA*SSTAPY
Trigger: ATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGAC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCATCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: DETGWVLRDVHHRGPRQASVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GSALEPNLLDETGWVLRDPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGCAGCAGCACTGCCCTaGCCTGACCTGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPAAALP*PDLRQQ
Trigger: CTGCTGCCTCAGGTCAGGCCAGGGCAGTGCTGCTGC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGTCAGTCACTGTCAGTaGGCCCAAGTGCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREVSHCQ*AQVLTS
Trigger: TGAGGTCAGCACTTGGGCCCACTGACAGTGACTGAC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGTTGGAGGTAAAGGAGTaGGCCCGGGGCATGTCAGAG +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDELEVKE*ARGMSE
Trigger: CTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAA...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGTGTGCCAGGGAGAGTaGCCTGCTGGAACTCCATGG +
Preference number: 2 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAVCQGE*PAGTPW
Trigger: CCATGGAGTTCCAGCAGGTCACTCTCCCTGGCACAC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGAGTGGGCCCAAGTGCTaGCCTCAGTTTAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDESGPKC*PQFRFP
Trigger: GGGAAACCTAAACTGAGGTCAGCACTTGGGCCCACT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp TCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGCGTGAAGCTGGAAACTaGTCCCGGCCTGGGAGGACC +
Preference number: 2 (lower is better)
Translates to: SSEEAEKNHVRCFLLIWMREAGN*SRPGRT
Trigger: GGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACG...CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR GCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 2 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 2 (lower is better)
Translates to: GSALEPNLLDETGWVLRDAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR GCA 90 bp AGGGCCCCTGTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 2 (lower is better)
Translates to: RAPVTALAWQPHGLPSPRSAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...CCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 2 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: AKLTAALLEATAPTGACVPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
3UTR-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTACTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 2 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGLEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAGTCCCTTCGTCCTCTaGAGCCTGGCGCCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: CWMRLAGSYEMSITEALGSPFVL*SLAPGS
Trigger: TGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGAGCCAGGTATTGCCTaGAAGACTTGGGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSEPGIA*KTWASG
Trigger: CCCAGATGCCCAAGTCTTCCAGGCAATACCTGGCTC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCAGAAAGTAAGGGGATaGATTGGGGCTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEQKVRG*IGAGPE
Trigger: CTCAGGCCCAGCCCCAATCCATCCCCTTACTTTCTG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAAACCCCTGCAGAGGTaGCCTTGGACACCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPKPLQR*PWTPGS
Trigger: GGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACCTATCACCTGGCTCTaGGCCCCAGGATGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPPITWL*APGCFS
Trigger: GCTAAAGCATCCTGGGGCCCAGAGCCAGGTGATAGG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAAGCATGTTTCACCCTaGGCTGGGGGTGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLKHVSP*AGGASQ
Trigger: TTGGGAAGCACCCCCAGCCCAGGGTGAAACATGCTT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AACGTTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGTTAGTGCAGAAAAACTGATCCCGGCCTaGGAGGACCCTGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: NVVGRGLLSRPHHPVSAEKLIPA*EDPGAG
Trigger: CCCTGCTCCAGGGTCCTCCCAGGCCGGGATCAGTTT...TTCTGCACTAACAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAAACTGATCCCGGCCTaGGAGGACCCTGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPKLIPA*EDPGAG
Trigger: CCCTGCTCCAGGGTCCTCCCAGGCCGGGATCAGTTT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp AGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: SSCAPPRRRPRRTTCGASRGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...AGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR TCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGGGGAAGTCACTCAGTaGCCTGCACCCTGGAAGACA +
Preference number: 2 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQGEVTQ*PAPWKT
Trigger: TGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGAGCCCAGGACATGCGTaGAGCTGGAAACTGATCCCG +
Preference number: 2 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRSPGHA*SWKLIP
Trigger: CGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCT...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR GCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 2 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR GCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGTTCCCGGGTACTGCTaGGGTCACCACTTAGACATC +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPVPGYC*GHHLDI
Trigger: GATGTCTAAGTGGTGACCGCAGCAGTACCCGGGAAC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAGCCCGCTCAGTGTATaGAAGTTCTGGAACGGGGAC +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPSPLSV*KFWNGD
Trigger: GTCCCCGTTCCAGAACTTGCATACACTGAGCGGGCT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp AAGGAGTGGGCCCGGGGCATGTCAGAGAAGGCTGGCTTCCTGGGCGTGGGCACTAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATG +
Preference number: 2 (lower is better)
Translates to: KEWARGMSEKAGFLGVGTKNHVR*FLLIWM
Trigger: CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT...AGTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATGCCCCGGGCCCACTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 2 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LQANDVKHPARHLTDVVSSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: DETGWVLRDVHHRGPRQALEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 2 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGGGAGAGTGACCTGCTaGAACTCCATGGCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSGRVTC*NSMAES
Trigger: ACTTTCTGCCATGGAGTTCCAGCAGGTCACTCTCCC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGATTGGGGCTGGGCCTaGGCCAGGTATTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LTAALLEATAPTGACVLADWGWA*ARYCLE
Trigger: TTCCAGGCAATACCTGGCTCAGGCCCAGCCCCAATC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPAPSPD*PSLGPD
Trigger: ATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGCGGAGATCACGGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: LTAALLEATAPTGACVLARRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCG...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp GTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 2 (lower is better)
Translates to: VTALAWQPHGLPSPRPSVGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...TACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGSGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: AKLTAALLEATAPTGACVAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
3UTR-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: AALLEATAPTGACVLAFLAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCAGTCCCTTCGTCCTCTaGAGCCTGGCGCCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: AKLTAALLEATAPTGACVSPFVL*SLAPGS
Trigger: TGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACT...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
3UTR-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTCAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: AGSYEMSITEALGKHSLAQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAATTGCCTGGAAGACTTaGGCATCTGGGTACCACCGT +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPIAWKT*ASGYHR
Trigger: ACGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAAT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGGACTAGAACACTTATaGCAAGTCTCGGGAGGTCAT +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREGLEHL*QVSGGH
Trigger: ATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: PTCWMRLAGSYEMSITEARGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGGGGTTCCCGGGTACTaGTGCGGTCACCACTTAGAC +
Preference number: 2 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQGVPGY*CGHHLD
Trigger: GTCTAAGTGGTGACCGCAGCAGTACCCGGGAACCCC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: LTAALLEATAPTGACVLAAPSPD*PSLGPD
Trigger: ATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGAGGTACCCAATAACTaGTCGCTAATGCAGGGAATG +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSEVPNN*SLMQGM
Trigger: CATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTCTCTGGGCCCCAGGATaGTTTAGCCACTTGAGCCGG +
Preference number: 2 (lower is better)
Translates to: LQANDVKHPARHLTDVVSLWAPG*FSHLSR
Trigger: CCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAG...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: FLFVEVANLPAQQGHPALGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...AAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 2 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 2 (lower is better)
Translates to: AGSYEMSITEALGKHSLALDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GTCCCACACAACCAGGACCTTCCCCGACTTGGTAGAGGAGTTCCGGATGCAGTAGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACA +
Preference number: 2 (lower is better)
Translates to: VPHNQDLPRLGRGVPDAVGTAWS*VSGIGT
Trigger: TGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCC...TACTGCATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCTGGTTGTGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAAGACAACCAACTGTTaGGGTTCCCGGGTACTGCTG +
Preference number: 2 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAKTTNC*GSRVLL
Trigger: CAGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACAGACTGCCCAAGTTTaGGTCCTGATCTGTTACTCG +
Preference number: 2 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPQTAQV*VLICYS
Trigger: CGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCATTAAAAATCCAGCCTaGAAGGTGTGCCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSIKNPA*KVCQGE
Trigger: CTCTCCCTGGCACACCTTCCAGGCTGGATTTTTAAT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CAA 90 bp GTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: VRCFLLIWMILKGKT*LDVVSSAARITLPV
Trigger: AACAGGCAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CAA 90 bp CGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTGGACGTG +
Preference number: 2 (lower is better)
Translates to: RSSSEEAEKNHVRCF*LIWMILKGKTLLDV
Trigger: CACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR TCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGCAGTGGGGAGTGGCATaGCTCCCTAAGCAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: LTAALLEATAPTGACVLAQWGVA*LPKQVQ
Trigger: CTGAACTTGCTTAGGGAGTCATGCCACTCCCCACTG...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAGTCACTCAGTGACCTaGACCCTGGAAGACAAGACA +
Preference number: 2 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQSHSVT*TLEDKT
Trigger: TGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGTCATCTGCAGGGCCTaGAGTTCCACCGCACCCTAT +
Preference number: 2 (lower is better)
Translates to: LQANDVKHPARHLTDVVSVICRA*SSTAPY
Trigger: ATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGAC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACCTGGAAGCAGCTGGCTaGCGTCATCTGCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHLEAAG*RHLQGL
Trigger: CAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAG...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAAGCTGTGCTAGCAGGTaGAGAGTCTGGGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSSCASR*RVWEAR
Trigger: CCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCT...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 2 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452765.7
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: AKLTAALLEATAPTGACVQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
3UTR-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPLVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACA +
Preference number: 2 (lower is better)
Translates to: AALLEATAPTGACVLAFLGTAWS*VSGIGT
Trigger: TGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGCAGACTGCCCAAGTTTaGGTCCTGATCTGTTACTCG +
Preference number: 2 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQQTAQV*VLICYS
Trigger: CGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTG...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCAGAAAGTAAGGGGATaGATTGGGGCTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGQKVRG*IGAGPE
Trigger: CTCAGGCCCAGCCCCAATCCATCCCCTTACTTTCTG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGTCAGTCACTGTCAGTaGGCCCAAGTGCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGVSHCQ*AQVLTS
Trigger: TGAGGTCAGCACTTGGGCCCACTGACAGTGACTGAC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACCCTACCCTTATATGTaGACTAGAACACTTATGGCA +
Preference number: 2 (lower is better)
Translates to: GQATSWHCPLSRQSRWREPYPYM*TRTLMA
Trigger: TGCCATAAGTGTTCTAGTCCACATATAAGGGTAGGG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CAA 90 bp CGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGCCTGTTAGT +
Preference number: 2 (lower is better)
Translates to: RCFLLIWMILKGKTL*DVVSSAARITLPVS
Trigger: ACTAACAGGCAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CAA 90 bp CGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGTTAGTGCAG +
Preference number: 2 (lower is better)
Translates to: RCFLLIWMILKGKTL*DVVSSAARITLLVQ
Trigger: CTGCACTAACAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR CAA 90 bp GTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGTTAGTG +
Preference number: 2 (lower is better)
Translates to: VRCFLLIWMILKGKT*LDVVSSAARITLLV
Trigger: CACTAACAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR-3UTR TCA 90 bp AAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGCGTGAAGCTGGAAACTaGTCCCGGCCTGGGAGGACC +
Preference number: 2 (lower is better)
Translates to: KNHVRCFLLIWMILKGKTREAGN*SRPGRT
Trigger: GGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACG...CGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACCGGAGATCACGGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHRRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCG...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAGCTGTGCTAGCAGGTaGAGAGTCTGGGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHSCASR*RVWEAR
Trigger: CCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 2 (lower is better)
Translates to: SFFSWKWPISLRSKAIQLGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...GAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 2 (lower is better)
Translates to: AALLEATAPTGACVLAFLLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp CTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 2 (lower is better)
Translates to: LSFRGSGQSPCAARPSSSLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...AGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGLVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGTTCCTGGAAGCAGCTaGCTGCCGTCATCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHVPGSS*LPSSAG
Trigger: CCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAAC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCAGTTTAGGTTTCCCTaGCATAAGGTGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLQFRFP*HKVLRK
Trigger: TTTTCTTAGCACCTTATGTCAGGGAAACCTAAACTG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCAGTTTAGGTTTCCCTaGCATAAGGTGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEQFRFP*HKVLRK
Trigger: TTTTCTTAGCACCTTATGTCAGGGAAACCTAAACTG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACTGTGGCCCCCTTGGTTaGGTGAAAGCACCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHCGPLG*VKAPPE
Trigger: CTCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACA...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAAGCCCGCTCAGTGTATaGAAGTTCTGGAACGGGGAC +
Preference number: 2 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSSPLSV*KFWNGD
Trigger: GTCCCCGTTCCAGAACTTGCATACACTGAGCGGGCT...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACA +
Preference number: 2 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSGTAWS*VSGIGT
Trigger: TGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCC...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAAACCCCTGCAGAGGTaGCCTTGGACACCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHKPLQR*PWTPGS
Trigger: GGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACCCAAGTTTGGGTCCTaGTCTGTTACTCGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSPKFGS*SVTRCA
Trigger: TGCACAGCGAGTAACAGATCAGGACCCAAACTTGGG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGGCAAAGCTCACTGCTaGTTTATTGGAGGCAACAGC +
Preference number: 2 (lower is better)
Translates to: LQANDVKHPARHLTDVVSGKAHC*FIGGNS
Trigger: GCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACCCAGGGAGAGTGACCTaGTGGAACTCCATGGCAGAA +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHPGRVT*WNSMAE
Trigger: TTCTGCCATGGAGTTCCAGCAGGTCACTCTCCCTGG...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGGGAGGAGGAATGGCTaGTTTTCCAGAGATAGATCA +
Preference number: 2 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGGRRNG*FSRDRS
Trigger: TGATCTATCTCTGGAAAACCAGCCATTCCTCCTCCC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGACCAGGGCCCCAGCTaGGCTTCGGGTAACCACAGG +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRDQGPS*ASGNHR
Trigger: CCTGTGGTTACCCGAAGCCCAGCTGGGGCCCTGGTC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGAGAGGTCGTGAGGGGTaGCAGGGAGCCTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRRGREG*QGAWQG
Trigger: TCCCTGCCAGGCTCCCTGCCACCCCTCACGACCTCT...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGCTCATGGCCCATCACTaGATAGAGCCCAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: KNHVRCFLLIWMILKGKTLMAHH*IEPSPG
Trigger: TCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAG...CGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR TCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAGCACTGCCCTGGCCTaGCCTGAGGCAGCAGAACTG +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASSTALA*PEAAEL
Trigger: CAGTTCTGCTGCCTCAGGTCAGGCCAGGGCAGTGCT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGATTCTGCCTCAGCTCTaGGCCCCTCAGAGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRILPQL*APQSGA
Trigger: GGCCCCACTCTGAGGGGCTCAGAGCTGAGGCAGAAT...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp TTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAAGCCCAGGACATGCGTaGAGCTGGAAACTGATCCCG +
Preference number: 2 (lower is better)
Translates to: LLIWMILKGKTLLDVVSSSPGHA*SWKLIP
Trigger: CGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCT...TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAAGACAACCAACTGTTaGGGTTCCCGGGTACTGCTG +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHKTTNC*GSRVLL
Trigger: CAGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCTCCAGCCTCGGCTGTaGTGCACTGACCTCTCACCC +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASLQPRL*CTDLSP
Trigger: GGGTGAGAGGTCAGTGCACCACAGCCGAGGCTGGAG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGTGTGCCAGGGAGAGTaGCCTGCTGGAACTCCATGG +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRVCQGE*PAGTPW
Trigger: CCATGGAGTTCCAGCAGGTCACTCTCCCTGGCACAC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCTCTGGGCCCCAGGATaGTTTAGCCACTTGAGCCGG +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASLWAPG*FSHLSR
Trigger: CCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAAAGCAAAGGTGTCCTaGACTGCACCACTCACTAGC +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHKAKVS*TAPLTS
Trigger: GCTAGTGAGTGGTGCAGTCCAGGACACCTTTGCTTT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASAPSPD*PSLGPD
Trigger: ATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGAACAGAAGCTCCCTGTaGTCCAGCCTCGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRNRSSL*SSLGCG
Trigger: ACCACAGCCGAGGCTGGAGCACAGGGAGCTTCTGTT...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGATGGCTCCTTCTTCATaGTGGAGGACCACGGCCTGC +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRMAPSS*WRTTAC
Trigger: GCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCAT...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGGCACCTCACAGATGTaGTCAGTAAATGGTAATCCC +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHGTSQM*SVNGNP
Trigger: GGGATTACCATTTACTGACCACATCTGTGAGGTGCC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGTGCTGTGGCCCCCTTaGTTGAGTGAAAGCACCTCC +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASVLWPP*LSESTS
Trigger: GGAGGTGCTTTCACTCAACCAAGGGGGCCACAGCAC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCACTCCCCAGTGCTGTaGCCCCCTTGGTTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASHSPVL*PPWLSE
Trigger: TTCACTCAACCAAGGGGGCCACAGCACTGGGGAGTG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCATCCCTCCAGCGCCTaGATCACCCTCAAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASHPSSA*ITLKSL
Trigger: GAGGCTTTTGAGGGTGATCCAGGCGCTGGAGGGATG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCAGTGGGGAGTGGCATaGCTCCCTAAGCAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASQWGVA*LPKQVQ
Trigger: CTGAACTTGCTTAGGGAGTCATGCCACTCCCCACTG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGCCAAAGAAGCCAGCTaGCAGAATTTGCATCTGTAT +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHAKEAS*QNLHLY
Trigger: ATACAGATGCAAATTCTGGCAGCTGGCTTCTTTGGC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTT +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASGNSPY*SLCLSV
Trigger: AACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGGGAGAGTGACCTGCTaGAACTCCATGGCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRGRVTC*NSMAES
Trigger: ACTTTCTGCCATGGAGTTCCAGCAGGTCACTCTCCC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGCCCAGAAGGATCAGTaGGAACCGAGGTTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRAQKDQ*EPRFLL
Trigger: CAGAAGAAACCTCGGTTCCCACTGATCCTTCTGGGC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAAGCCTCTTCCCTGCTaGGCTTCAATCTGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASKPLPC*ASICLS
Trigger: AGAAAGGCAGATTGAAGCTCAGCAGGGAAGAGGCTT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAGTGAAATGAATCTGTaGACTACGATACAGCCAAAC +
Preference number: 2 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHSEMNL*TTIQPN
Trigger: GTTTGGCTGTATCGTAGTTCACAGATTCATTTCACT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGGCAAAGCTCACTGCTaGTTTATTGGAGGCAACAGC +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRGKAHC*FIGGNS
Trigger: GCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAGTCACTCAGTGACCTaGACCCTGGAAGACAAGACA +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASSHSVT*TLEDKT
Trigger: TGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCAGACTGCCCAAGTTTaGGTCCTGATCTGTTACTCG +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASQTAQV*VLICYS
Trigger: CGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTACACTTCTGAGGTGGTaGGGGTTGTCTGTCAAGCAT +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASTLLRW*GLSVKH
Trigger: ATGCTTGACAGACAACCCCCACCACCTCAGAAGTGT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGGGAGGAGGAATGGCTaGTTTTCCAGAGATAGATCA +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASGRRNG*FSRDRS
Trigger: TGATCTATCTCTGGAAAACCAGCCATTCCTCCTCCC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGGACTAGAACACTTATaGCAAGTCTCGGGAGGTCAT +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRGLEHL*QVSGGH
Trigger: ATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGCATTCAAAGGCATCCTaGGCTGCATGCATTGGACAA +
Preference number: 2 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRHSKAS*AACIGQ
Trigger: TTGTCCAATGCATGCAGCCCAGGATGCCTTTGAATG...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGAATCGATTGAACCCTaGAGATTTGCATTGAGCCGA +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASESIEP*RFALSR
Trigger: TCGGCTCAATGCAAATCTCCAGGGTTCAATCGATTC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR TCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTTCTGCAGGAAATGAATaGAAAAGGGATTCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: NLTDIITSQRSQLPEFASSAGNE*KRDSAS
Trigger: TGAGGCAGAATCCCTTTTTCATTCATTTCCTGCAGA...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GCTTCTCTGGCCTGGGCAGGACTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCTTCAGCGCAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: ASLAWAGLRAAP*PQALAASAQEA
Trigger: GGCCTCCTGCGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCAGAGAAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp ATCGCTGGAGGTGCGGGAGCTGCGGCTTCTCTGGCCTaGGCAGGACTGCGGGCCGCGCCATGGCCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: IAGGAGAAASLA*AGLRAAPWPQA
Trigger: TGCCTGAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCAGCGAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp ACCCTCGCCCATCCTGAGGTGCAGGAAGCACCTCCCTaGGGCTGCGCTGAGCCCCAACCAGCAGGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: TLAHPEVQEAPP*GCAEPQPAGEL
Trigger: GAGCTCCCCTGCTGGTTGGGGCTCAGCGCAGCCCCAGGGAGGTGCTTCCTGCACCTCAGGATGGGCGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp CCTGGGCGTGGGCACTGGGGGTGGTGGGTAAGCCGGTaGGTGCATCAGGGCATCCTCAAGCCTTCCGGGCTC +
Preference number: 3 (lower is better)
Translates to: PGRGHWGWWVSR*VHQGILKPSGL
Trigger: GAGCCCGGAAGGCTTGAGGATGCCCTGATGCACCCACCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp TACCCTGGGGCAAGGCTCAGCCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTCAGCAGCCAGGCCAAC +
Preference number: 3 (lower is better)
Translates to: YPGARLSPPRAQ*VPLGVLSSQAN
Trigger: GTTGGCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGGGCTGAGCCTTGCCCCAGGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp CCCGGAAGCAAGGGGGTTTCCGGAGGCCGGGTGCGGTaGGCATGGTGCTCAGAGGGGGATCGCTCATCCTTC +
Preference number: 3 (lower is better)
Translates to: PGSKGVSGGRVR*AWCSEGDRSSF
Trigger: GAAGGATGAGCGATCCCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAACCCCCTTGCTTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR GCA 72 bp TCCTGGAAGCAGCTGGCTGCCGTCATCTGCAGGGCCTaGAGTTCCACCGCACCCTATGGCCCCCTGGGGTCA +
Preference number: 3 (lower is better)
Translates to: SWKQLAAVICRA*SSTAPYGPLGS
Trigger: TGACCCCAGGGGGCCATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp ACTCTCCCGGAAGCAAGGGGGTTTCCGGAGGCCGGGTaGGGTGGGCATGGTGCTCAGAGGGGGATCGCTCAT +
Preference number: 3 (lower is better)
Translates to: TLPEARGFPEAG*GGHGAQRGIAH
Trigger: ATGAGCGATCCCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAACCCCCTTGCTTCCGGGAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp ACAGACGTGGACAGCTGTGCTAGCAGGTGCAGAGTCTaGGAGGCGAGGCTGGACCAGGGCCCCAGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: TDVDSCASRCRV*EARLDQGPSWA
Trigger: AGCCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCTGTCCACGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp GGCAGGGGGTGTGTGCGAGGTGCCCAGCGAGGGGCTTaGTGCTGCTGGGTCACAGAAACAGAGGTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: GRGCVRGAQRGA*CCWVTETEVVA
Trigger: GGCCACAACCTCTGTTTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCACCTCGCACACACCCCCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp GTGGCCTTGGACACCTGGTTCCTGGAAGCAGCTGGCTaGCGTCATCTGCAGGGCCTGCAGTTCCACCGCACC +
Preference number: 3 (lower is better)
Translates to: VALDTWFLEAAG*RHLQGLQFHRT
Trigger: GGTGCGGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp AGAGTCTGGGAGGCGAGGCTGGACCAGGGCCCCAGCTaGGCTTCGGGTAACCACAGGCCTCAACTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: RVWEARLDQGPS*ASGNHRPQLSS
Trigger: ACTGGACAGTTGAGGCCTGTGGTTACCCGAAGCCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGACTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAATGCCCAGCGAGGGGCTaGATGCTGCTGGGTCACAGA +
Preference number: 3 (lower is better)
Translates to: GQATSWHCPLSRQSRWRECPARG*MLLGHR
Trigger: TCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCA...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp GGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATaGTGCCCACACTCACAAACAGGACCTCGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: GWAARGCGSAPP*CPHSQTGPRPP
Trigger: TGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR CCA 72 bp AGAGGTGGCCTTGGACACCTGGTTCCTGGAAGCAGCTaGCTGCCGTCATCTGCAGGGCCTGCAGTTCCACCG +
Preference number: 3 (lower is better)
Translates to: RGGLGHLVPGSS*LPSSAGPAVPP
Trigger: CGGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp CCGCGCCATGGCCTCAGGCACTGGCAGCTTCAGCGCAGGAGGCCGGGGAGCCACTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: PRHGLRHWQLQRRRPGSHWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...GTGGCTCCCCGGCCTCCTGCGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CAA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 3 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR TCA 72 bp GCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGTaGAGCTGGAAACTGATCCCGGCCTGGGAGGACCCT +
Preference number: 3 (lower is better)
Translates to: AHHWIEPSPGHA*SWKLIPAWEDP
Trigger: AGGGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR GCA 72 bp GGGAGGTCATGGGAACTCCTCATGGCTCCTTCTTCATaGTGGAGGACCACGGCCTGCCCCATCCCACCCCAA +
Preference number: 3 (lower is better)
Translates to: GRSWELLMAPSS*WRTTACPIPPQ
Trigger: TTGGGGTGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp TGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTaGCCACACTCACAAACAGGACCTCGCCCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: WAARGCGSAPPC*PHSQTGPRPPG
Trigger: ACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
3UTR CCA 72 bp TGGGCTTCGGGTAACCACAGGCCTCAACTGTCCAGTTaGCCAGAGGGACCTATCACCTGGCTCTGGGCCCCA +
Preference number: 3 (lower is better)
Translates to: WASGNHRPQLSS*PEGPITWLWAP
Trigger: TGGGGCCCAGAGCCAGGTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGGCCTGTGGTTACCCGAAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 3 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CAA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 3 (lower is better)
Translates to: GSALEPNLLDETGWVLRDAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR TCA 72 bp GTGGGCTCCCAGCCCAGACTGCCCAAGTTTGGGTCCTaGTCTGTTACTCGCTGTGCACCCTGGGGAAGTCAC +
Preference number: 3 (lower is better)
Translates to: VGSQPRLPKFGS*SVTRCAPWGSH
Trigger: GTGACTTCCCCAGGGTGCACAGCGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp AAGCACCTCATACCCAGCTGTCCCCAGACTGGGCTGTaGACTCAGCCAGGCCAGAGGCCCCTGTCTGGAATG +
Preference number: 3 (lower is better)
Translates to: KHLIPSCPQTGL*TQPGQRPLSGM
Trigger: CATTCCAGACAGGGGCCTCTGGCCTGGCTGAGTTCACAGCCCAGTCTGGGGACAGCTGGGTATGAGGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GAAGAGGAAACCCCTGCAGAGGTGGCCTTGGACACCTaGTTCCTGGAAGCAGCTGGCTGCCGTCATCTGCAG +
Preference number: 3 (lower is better)
Translates to: EEETPAEVALDT*FLEAAGCRHLQ
Trigger: CTGCAGATGACGGCAGCCAGCTGCTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp AGGTCATGGGAACTCCTCATGGCTCCTTCTTCATGCTaGAGGACCACGGCCTGCCCCATCCCACCCCAACAC +
Preference number: 3 (lower is better)
Translates to: RSWELLMAPSSC*RTTACPIPPQH
Trigger: GTGTTGGGGTGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 3 (lower is better)
Translates to: AKLTAALLEATAPTGACVAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
3UTR-3UTR CAA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGTATTGCCTGGAAGACTaGGGCATCTGGGTACCACCG +
Preference number: 3 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEYCLED*GIWVPP
Trigger: CGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAATA...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp GGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATaGGACTGGCTGGGTCCTACGAGATGTCCATCACAG +
Preference number: 3 (lower is better)
Translates to: GAWFSPRTQPAG*DWLGPTRCPSQ
Trigger: CTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR TCA 72 bp CAAGACTCACATAAGCCAGGGCAGAGAGGCCGGAAGTaGCACTGTGAGGGGAGGGCACTTGGGTGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: QDSHKPGQRGRK*HCEGRALGCWQ
Trigger: TTGCCAGCACCCAAGTGCCCTCCCCTCACAGTGTCACTTCCGGCCTCTCTGCCCTGGCTTATGTGAGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp GAACTGGTGAGTGGGGTGTGGGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGATCTGTTACTCGCTGTG +
Preference number: 3 (lower is better)
Translates to: ELVSGVWAPSPD*PSLGPDLLLAV
Trigger: CACAGCGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGCCCACACCCCACTCACCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp GTACGGGGAAAGGCTGATATCCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGTGTCCGAGCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: VRGKADIHRPLN*AVEAVCVRAGV
Trigger: GACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp GCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTTCCTGGGGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: AHCCFIGGNSPY*SLCLSVPGGPR
Trigger: CCTGGGACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR CCA 72 bp TGTGACCCTGGTGTCCTAGGCCATCCCTCCAGCGCCTaGATCACCCTCAAAAGCCTCTTCCCTGCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: CDPGVLGHPSSA*ITLKSLFPAEL
Trigger: AAGCTCAGCAGGGAAGAGGCTTTTGAGGGTGATCCAGGCGCTGGAGGGATGGCCTAGGACACCAGGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 3 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATATTGCCTGGAAGACTaGGGCATCTGGGTACCACCG +
Preference number: 3 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPYCLED*GIWVPP
Trigger: CGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAATA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp CAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: QLLRSSSEEAEKNHVRCFLKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...GAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR-3UTR CAA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGAGCCCAGGCACAGCTaGGTCCTGGGTTTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGEPRHS*VLGFWD
Trigger: ATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCAAGACAACCAACTGTaGGGGTTCCCGGGTACTGCT +
Preference number: 3 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAQDNQL*GFPGTA
Trigger: AGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTTG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp AGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: SKAIQLLRSSSEEAEKNHLKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...GTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR TCA 72 bp GAGCCAGGCAGGGGCCAGGGTCTAGGCTCAGAGCAGTaGAGGATAGATAGGGTCACATGCCAGTTAGTGGCA +
Preference number: 3 (lower is better)
Translates to: EPGRGQGLGSEQ*RIDRVTCQLVA
Trigger: TGCCACTAACTGGCATGTGACCCTATCTATCCTTCACTGCTCTGAGCCTAGACCCTGGCCCCTGCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp TCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCATCACAGAGGCCCTAGG +
Preference number: 3 (lower is better)
Translates to: SALEPNLLDETG*VLRDVHHRGPR
Trigger: CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
3UTR CCA 72 bp TGTGAACTCAGCCAGGCCAGAGGCCCCTGTCTGGAATaGGACCAGGCATGCAGGAGGTACCCAATAACTGCT +
Preference number: 3 (lower is better)
Translates to: CELSQARGPCLE*DQACRRYPITA
Trigger: AGCAGTTATTGGGTACCTCCTGCATGCCTGGTCCCATTCCAGACAGGGGCCTCTGGCCTGGCTGAGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp TTATGGCAAGTCTCGGGAGGTCATGGGAACTCCTCATaGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LWQVSGGHGNSS*LLLHAGGPRPA
Trigger: GGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACTTGCCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GGGCTTGATGCTGCTGGGTCACAGAAACAGAGGTTGTaGCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGC +
Preference number: 3 (lower is better)
Translates to: GLDAAGSQKQRL*PFPHSPRLETS
Trigger: GCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGCCACAACCTCTGTTTCTGTGACCCAGCAGCATCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp CTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTC +
Preference number: 3 (lower is better)
Translates to: LVSKGRSFFSWK*PISLRSKAIQL
Trigger: GAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR CCA 72 bp GAGTCGCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATC +
Preference number: 3 (lower is better)
Translates to: ESLVSKGRSFFS*KWPISLRSKAI
Trigger: GATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGCGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp CTCTTCAGCTATCTTCAGGAACTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGATGTGGGTGGTCCTCG +
Preference number: 3 (lower is better)
Translates to: LFSYLQELGLVG*HRWGLRCGWSS
Trigger: CGAGGACCACCCACATCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGCTGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CCA 72 bp GCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATC +
Preference number: 3 (lower is better)
Translates to: AHLVSKGRSFFS*KWPISLRSKAI
Trigger: GATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR TCA 72 bp CATAGTCTTCATTGTCCGTGGGGTACGGGGAAAGGCTaGTATCCACAGGCCGCTCAACTGCGCCGTAGAAGC +
Preference number: 3 (lower is better)
Translates to: HSLHCPWGTGKG*YPQAAQLRRRS
Trigger: GCTTCTACGGCGCAGTTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACCCCACGGACAATGAAGACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR-3UTR CAA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCAAGACAACCAACTGTaGGGGTTCCCGGGTACTGCT +
Preference number: 3 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGQDNQL*GFPGTA
Trigger: AGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTTG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTTATTGCCTGGAAGACTaGGGCATCTGGGTACCACCG +
Preference number: 3 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGYCLED*GIWVPP
Trigger: CGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAATA...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp AAGACAAGACAACCAACTGTTGGGGTTCCCGGGTACTaGTGCGGTCACCACTTAGACATCAGCATGGGCACC +
Preference number: 3 (lower is better)
Translates to: KTRQPTVGVPGY*CGHHLDISMGT
Trigger: GGTGCCCATGCTGATGTCTAAGTGGTGACCGCAGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp CTGTTACTCGCTGTGCACCCTGGGGAAGTCACTCAGTaGCCTGCACCCTGGAAGACAAGACAACCAACTGTT +
Preference number: 3 (lower is better)
Translates to: LLLAVHPGEVTQ*PAPWKTRQPTV
Trigger: AACAGTTGGTTGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp TTTCCAGAGATAGATCAGAACAACAGAAGCTCCCTGTaGTCCAGCCTCGGCTGTGGTGCACTGACCTCTCAC +
Preference number: 3 (lower is better)
Translates to: FPEIDQNNRSSL*SSLGCGALTSH
Trigger: GTGAGAGGTCAGTGCACCACAGCCGAGGCTGGAGCACAGGGAGCTTCTGTTGTTCTGATCTATCTCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp TCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATGATCTTGAAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: SSSEEAEKNHVR*FLLIWMILKGK
Trigger: TTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR CCA 72 bp GCACCACTCACTAGCTCAGCACCCCAGGCACCAGGCTaGAAACCACATCTCGCACCCAATTCTCCATTTAAA +
Preference number: 3 (lower is better)
Translates to: APLTSSAPQAPG*KPHLAPNSPFK
Trigger: TTTAAATGGAGAATTGGGTGCGAGATGTGGTTTCCAGCCTGGTGCCTGGGGTGCTGAGCTAGTGAGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp CAGCGCCTGGATCACCCTCAAAAGCCTCTTCCCTGCTaGGCTTCAATCTGCCTTTCTATGAAATGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: QRLDHPQKPLPC*ASICLSMKWPQ
Trigger: TTGGGGCCATTTCATAGAAAGGCAGATTGAAGCTCAGCAGGGAAGAGGCTTTTGAGGGTGATCCAGGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp TGGACTAGAACACTTATGGCAAGTCTCGGGAGGTCATaGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: WTRTLMASLGRS*ELLMAPSSCWR
Trigger: CCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp AGGGGAGCTCCGCACAACGTGGCCCAGAAGGATCAGTaGGAACCGAGGTTTCTTCTGGTTCTAAAAACATCT +
Preference number: 3 (lower is better)
Translates to: RGAPHNVAQKDQ*EPRFLLVLKTS
Trigger: AGATGTTTTTAGAACCAGAAGAAACCTCGGTTCCCACTGATCCTTCTGGGCCACGTTGTGCGGAGCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp CGGGCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 3 (lower is better)
Translates to: RAHLVSKGRSFFSWKWPILIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...GATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513020.5
3UTR-3UTR CAA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 3 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPLIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR TCA 72 bp CCTAAGCAAGTTCAGGTCAGACAGGGCAAAGAATTCTaGCTGCAGGGAGGAGGAATGGCTGGTTTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: PKQVQVRQGKEF*LQGGGMAGFPE
Trigger: CTCTGGAAAACCAGCCATTCCTCCTCCCTGCAGTCAGAATTCTTTGCCCTGTCTGACCTGAACTTGCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp AGGGGTCTGCTCTGTACCCATCAAATCTCCCTCCAGTaGGAATGGCTGGAAGATGGCTTAAAAGGGTTCACC +
Preference number: 3 (lower is better)
Translates to: RGLLCTHQISLQ*EWLEDGLKGFT
Trigger: GGTGAACCCTTTTAAGCCATCTTCCAGCCATTCTCACTGGAGGGAGATTTGATGGGTACAGAGCAGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp AGGGGAGGGCACTTGGGTGCTGGCAAAACTATTTCCTaGTGGTGGTTGCAGATCGTTCACTTCCTAACAGTG +
Preference number: 3 (lower is better)
Translates to: RGGHLGAGKTIS*WWLQIVHFLTV
Trigger: CACTGTTAGGAAGTGAACGATCTGCAACCACCATCAGGAAATAGTTTTGCCAGCACCCAAGTGCCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp AAAAGGGTTCACCACTCACACACACTTCTGAGGTGGTaGGGGTTGTCTGTCAAGCATCTTCACAGGGTCACT +
Preference number: 3 (lower is better)
Translates to: KRVHHSHTLLRW*GLSVKHLHRVT
Trigger: AGTGACCCTGTGAAGATGCTTGACAGACAACCCCCACCACCTCAGAAGTGTGTGTGAGTGGTGAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATaGATGATCTTGAAGGGGAAAACGTTGTTGGACGTG +
Preference number: 3 (lower is better)
Translates to: AEKNHVRCFLLI*MILKGKTLLDV
Trigger: CACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR TCA 72 bp AAAATGGGTCTACTAGCAGCTGCTTCTCCAAGCAAATaGTGTCAAGCACCCAGCTCGGCACCTCACAGATGT +
Preference number: 3 (lower is better)
Translates to: KMGLLAAASPSK*CQAPSSAPHRC
Trigger: ACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAAGCAGCTGCTAGTAGACCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR-3UTR CAA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCTGTGGCCCCCTTGGTaGAGTGAAAGCACCTCCAGA +
Preference number: 3 (lower is better)
Translates to: NLTDIITSQRSQLPEFASLWPPW*SESTSR
Trigger: TCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACAG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GGGCAAAGAATTCTGACTGCAGGGAGGAGGAATGGCTaGTTTTCCAGAGATAGATCAGAACAACAGAAGCTC +
Preference number: 3 (lower is better)
Translates to: GQRILTAGRRNG*FSRDRSEQQKL
Trigger: GAGCTTCTGTTGTTCTGATCTATCTCTGGAAAACCAGCCATTCCTCCTCCCTGCAGTCAGAATTCTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp ATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTaGTCAGTAAATGGTAATCCCAACCCTACCCTTATA +
Preference number: 3 (lower is better)
Translates to: MMSSTQLGTSQM*SVNGNPNPTLI
Trigger: TATAAGGGTAGGGTTGGGATTACCATTTACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp CCAACAACAGATCTACATATGTCATATGTGGACATATaGCAGAGGTGGCATTGCAGATGGGCGCAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: PTTDLHMSYVDI*QRWHCRWAQKV
Trigger: AACTTTCTGCGCCCATCTGCAATGCCACCTCTGTCATATGTCCACATATGACATATGTAGATCTGTTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GAAAGAATCCAACAACAGATCTACATATGTCATATGTaGACATATGACAGAGGTGGCATTGCAGATGGGCGC +
Preference number: 3 (lower is better)
Translates to: ERIQQQIYICHM*TYDRGGIADGR
Trigger: GCGCCCATCTGCAATGCCACCTCTGTCATATGTCCACATATGACATATGTAGATCTGTTGTTGGATTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp AGATCTTCATACCCTAGAACCCAGGAGTCAGACTCCTaGGTACAAACCCTAGAAAAATTTGTGCACCATTTG +
Preference number: 3 (lower is better)
Translates to: RSSYPRTQESDS*VQTLEKFVHHL
Trigger: CAAATGGTGCACAAATTTTTCTAGGGTTTGTACTCAGGAGTCTGACTCCTGGGTTCTAGGGTATGAAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp TGCCAAGGATGGGAAGGCAAGGGAATTCTGTTTTACTaGTGGTGGGCACGTAAACTAGAACAATATTTAGAA +
Preference number: 3 (lower is better)
Translates to: CQGWEGKGILFY*WWARKLEQYLE
Trigger: TTCTAAATATTGTTCTAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCCCTTGCCTTCCCATCCTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR GCA 72 bp CATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTaGATCTGTATGATTCAAGGGGATAAAGCACAGAAA +
Preference number: 3 (lower is better)
Translates to: HNNEPKKPAARI*ICMIQGDKAQK
Trigger: TTTCTGTGCTTTATCCCCTTGAATCATACAGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp GGATGGGAAGGCAAGGGAATTCTGTTTTACTGCTGGTaGGCACGTAAACTAGAACAATATTTAGAAAGATCT +
Preference number: 3 (lower is better)
Translates to: GWEGKGILFYCW*ARKLEQYLERS
Trigger: AGATCTTTCTAAATATTGTTCTAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCCCTTGCCTTCCCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CCA 72 bp CAAGGATGGGAAGGCAAGGGAATTCTGTTTTACTGCTaGTGGGCACGTAAACTAGAACAATATTTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: QGWEGKGILFYC*WARKLEQYLER
Trigger: TCTTTCTAAATATTGTTCTAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCCCTTGCCTTCCCATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp AATGAACATGCACAAACTATACTACGCACAGCAACATaGATAAATCTCACAGACATAATAACGAGCCAAAGA +
Preference number: 3 (lower is better)
Translates to: NEHAQTILRTAT*INLTDIITSQR
Trigger: TCTTTGGCTCGTTATTATGTCTGTGAGATTTATTCATGTTGCTGTGCGTAGTATAGTTTGTGCATGTTCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR TCA 72 bp GAAGACCCAAATGGAAAGAGAGGTAAACCATGTTCATaGATCAGAAAACTCAATATTGTAAAGACGTCAATT +
Preference number: 3 (lower is better)
Translates to: EDPNGKRGKPCS*IRKLNIVKTSI
Trigger: AATTGACGTCTTTACAATATTGAGTTTTCTGATTCATGAACATGGTTTACCTCTCTTTCCATTTGGGTCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCCTGGGCAGGACTGCGGGCCGCGCCATGGCCTCAGGCACTGGCAGCTTCAGCGTTTCCGGAGGCCGGGTaGGGTGGGCATGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AWAGLRAAPWPQALAASAFPEAG*GGHGAQ
Trigger: CTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAA...CGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CCGCGCCATGGCCTCAGGCACTGGCAGCTTCAGCGCAGGAGGCCGGGGAGCCACCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PRHGLRHWQLQRRRPGSHPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...GTGGCTCCCCGGCCTCCTGCGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAATGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREWPGQD*GPRHGL
Trigger: GAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCA...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGATGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: ANLPAQQGHPALALLLGGWPGQD*GPRHGL
Trigger: GAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCA...TCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGTGGAGCAGGCCCCGTaGCCAGGGGTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSRAAHGPSLDRAQPRTCVEQAP*PGVQGS
Trigger: GGAGCCCTGGACCCCTGGCCACGGGGCCTGCTCCAC...GCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR TCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGGCCCTCCGTCCTCGTaGCCTGCTCGGGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRGPPSS*PARGRC
Trigger: ACACCGGCCCCGAGCAGGTCACGAGGACGGAGGGCC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435136.8
CDS-3UTR CCA 90 bp AGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACAGGTACGGGTGGCGGGTaGAGGCTGAGGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: RPSRAAHGPSLDRAQPRTGTGGG*RLRLHP
Trigger: GGGGTGCAGCCTCAGCCTCCACCCGCCACCCGTACC...TGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR CCA 90 bp CCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCCAGGGCGGGTACGGGTaGCGGGTGGAGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSRAAHGPSLDRAQPRTCQGGYG*RVEAEA
Trigger: AGCCTCAGCCTCCACCCGCCACCCGTACCCGCCCTG...GCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR TCA 90 bp GCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAAGAAGTCCAGTCGCGGTaGGGGTCCCGAGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AQQGHPALALLLGGGREEEVQSR*GSRGEG
Trigger: GCCTTCCCCTCGGGACCCTCACCGCGACTGGACTTC...TTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR GCA 90 bp GGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTTGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GCGSAPPCCPHSQTGPRPWPGQD*GPRHGL
Trigger: GAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCA...AGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCCTGGGCGTGGGCACTaGGGGTGGTGGGTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLPGRGH*GWWVSR
Trigger: CCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGAGGCCGGGTGCGGTaGGCATGGTGCTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAGGRVR*AWCSEG
Trigger: CCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGTGGAGCAGGCCCCGTaGCCAGGGGTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPVEQAP*PGVQGS
Trigger: GGAGCCCTGGACCCCTGGCCACGGGGCCTGCTCCAC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCGTGGAGCAGGCCCCGTaGCCAGGGGTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALVEQAP*PGVQGS
Trigger: GGAGCCCTGGACCCCTGGCCACGGGGCCTGCTCCAC...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTCTGGGAGGCGAGGCTaGACCAGGGCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRSGRRG*TRAPAG
Trigger: CCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGA...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGTCGGGGCCGGTGTCCTaGGGCCCAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLASGPVS*GPGRPC
Trigger: GCATGGCCTCCCTGGGCCCCAGGACACCGGCCCCGA...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435136.8
CDS-3UTR CCA 90 bp CCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGGCCCAGCCTCTGTTTaGGACAGGGCCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSRAAHGPSLDRAQPRTCGPASV*DRAWAG
Trigger: GCCAGCCCAGGCCCTGTCCCAAACAGAGGCTGGGCC...GCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGACCATCAGAGGTCGTaGGGGGTGGCAGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREDHQRS*GVAGSL
Trigger: CAGGCTCCCTGCCACCCCTCACGACCTCTGATGGTC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCACATCTGGGAGGCCGTaGTTAGGGGGCGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSTSGRP*LGGGGG
Trigger: GCCACCCCCGCCCCCTAAGCACGGCCTCCCAGATGT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAWPGQD*GPRHGL
Trigger: GAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCA...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGTGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQWPGQD*GPRHGL
Trigger: GAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCA...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAACCCTGGGCTGGGGGTaGTTCCCAAAGCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALTLGWG*FPKPLG
Trigger: CCCCAGTGGCTTTGGGAAGCACCCCCAGCCCAGGGT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCCTGGGCGTGGGCACTaGGGGTGGTGGGTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWPGRGH*GWWVSR
Trigger: CCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACCTGGGCGTGGGCACTaGGGGTGGTGGGTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPPGRGH*GWWVSR
Trigger: CCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCTGGCTTCCTGGGCGTaGGCACTGGGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSLASWA*ALGVVG
Trigger: ACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCGGGTGCGGTGGGCATaGTGCTCAGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDERVRWA*CSEGDR
Trigger: GCGATCCCCCTCTGAGCACCATGCCCACCGCACCCG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GCGSAPPCCPHSQTGPRPLRAAP*PQALAA
Trigger: AGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAG...AGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQSSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PALALLLGGGREEPRAVLSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...AAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAAGAGGTCGTGAGGGGTaGCAGGGAGCCTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALRGREG*QGAWQG
Trigger: TCCCTGCCAGGCTCCCTGCCACCCCTCACGACCTCT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTACAGGAAGCACCTCCCTaGGGCTGCGCTGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALQEAPP*GCAEPQ
Trigger: TTGGGGCTCAGCGCAGCCCCAGGGAGGTGCTTCCTG...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCGGCCCAGCCTCTGTTTaGGACAGGGCCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTGPASV*DRAWAG
Trigger: GCCAGCCCAGGCCCTGTCCCAAACAGAGGCTGGGCC...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGGAGCAGCTCCTCCGGTaGGGAGGAAGGAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: ARPSSSCAPPRRRPRRTTEQLLR*GGRSHL
Trigger: CAGGTGGCTCCTTCCTCCCCACCGGAGGAGCTGCTC...CGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR TCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAAGCACTGCCCTGGCCTaGCCTGAGGCAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALSTALA*PEAAEL
Trigger: CAGTTCTGCTGCCTCAGGTCAGGCCAGGGCAGTGCT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCCCCAGACTGGGCTGTaGACTCAGCCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLPQTGL*TQPGQR
Trigger: CCTCTGGCCTGGCTGAGTTCACAGCCCAGTCTGGGG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACAGACATGTGAGGCCTaGCGCGCCTGGCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQQTCEA*RAWLPH
Trigger: GTGGGGCAGCCAGGCGCGTCAGGCCTCACATGTCTG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435136.8
CDS-3UTR TCA 90 bp TCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTCGTGAAGCTGGAAACTaGTCCCGGCCTGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: SSSCAPPRRRPRRTTCGAREAGN*SRPGRT
Trigger: GGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACG...AGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR GCA 90 bp CTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACTAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVAGQHVGVVVLHHAAHTRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...AGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGACATCTGGGAGGCCGTaGTTAGGGGGCGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWTSGRP*LGGGGG
Trigger: GCCACCCCCGCCCCCTAAGCACGGCCTCCCAGATGT...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTTTTCCGGAGGCCGGGTaGGGTGGGCATGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAFPEAG*GGHGAQ
Trigger: CTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAA...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGCCTGGGCAGGACTaGGGGCCGCGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLWPGQD*GPRHGL
Trigger: GAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGCCA...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGTGGAGGTGCGGGAGCTaGGGCTTCTCTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAWRCGS*GFSGLG
Trigger: GCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCA...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCTGGAGGTGCGGGAGCTaGGGCTTCTCTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALWRCGS*GFSGLG
Trigger: GCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCA...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGGTGATCGCTGGAGGTaGGGGAGCTGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREGDRWR*GSCGFS
Trigger: AGAGAAGCCGCAGCTCCCGCACCTCCAGCGATCACC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGGTGATCGCTGGAGGTaGGGGAGCTGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALGDRWR*GSCGFS
Trigger: AGAGAAGCCGCAGCTCCCGCACCTCCAGCGATCACC...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGGGCACTGGGGGTGGTaGGTAAGCCGGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSGHWGW*VSRWVH
Trigger: ATGCACCCACCGGCTTACCCACCACCCCCAGTGCCC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCTGGGCGTGGGCACTaGGGGTGGTGGGTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRPGRGH*GWWVSR
Trigger: CCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGG...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTGGCTTCCTGGGCGTaGGCACTGGGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLALASWA*ALGVVG
Trigger: ACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAAGCCAGGCCAACATCTaGGAGGCCGTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALSQANI*EAVLRG
Trigger: CCCCCTAAGCACGGCCTCCCAGATGTTGGCCTGGCT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGGGTGCGGTGGGCATaGTGCTCAGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWRVRWA*CSEGDR
Trigger: GCGATCCCCCTCTGAGCACCATGCCCACCGCACCCG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGGAGGCCGGGTGCGGTaGGCATGGTGCTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGGGRVR*AWCSEG
Trigger: CCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGGAGGCCGGGTGCGGTaGGCATGGTGCTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPGGRVR*AWCSEG
Trigger: CCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGGAGGCCGGGTGCGGTaGGCATGGTGCTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAGGRVR*AWCSEG
Trigger: CCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGCTCCGGGCTGGGGCTaGCACTCTCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPAPGWG*HSPGSK
Trigger: CTTGCTTCCGGGAGAGTGCCAGCCCCAGCCCGGAGC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGTGGAGCAGGCCCCGTaGCCAGGGGTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQVEQAP*PGVQGS
Trigger: GGAGCCCTGGACCCCTGGCCACGGGGCCTGCTCCAC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCACTGGGGGTGGTGGGTAAGCCGGTGGGTGCATCAGGGCATCCTCAAGCCTTCGTTGGCTGGCACAGGTaGGGGCTCAGATGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGVVGKPVGASGHPQAFVGWHR*GLRCGW
Trigger: CCACCCACATCTGAGCCCCCACCTGTGCCAGCCAAC...GAAGGCTTGAGGATGCCCTGATGCACCCACCGGCTTACCCACCACCCCCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGCTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALLGLVG*HRWGLR
Trigger: TCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAG...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGLRAAP*PQALAA
Trigger: AGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQLRAAP*PQALAA
Trigger: AGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAG...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGLRAAP*PQALAA
Trigger: AGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSSSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGACCAGGGCCCCAGCTaGGCTTCGGGTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEDQGPS*ASGNHR
Trigger: CCTGTGGTTACCCGAAGCCCAGCTGGGGCCCTGGTC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTCTGGGAGGCGAGGCTaGACCAGGGCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPSGRRG*TRAPAG
Trigger: CCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CAA 72 bp AGGCAGGGGGTGTGTGCGAGGTGCCCAGCGAGGGGCTaGATGCTGCTGGGTCACAGAAACAGAGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RQGVCARCPARG*MLLGHRNRGCG
Trigger: GCCACAACCTCTGTTTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCACCTCGCACACACCCCCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCTGGGCAGGACTGCGGGCCGCGCCATGGCCTCAGGCACTGGCAGCTTCAGCGACAGGTGGAAGGACTTaGGTTTGTCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AWAGLRAAPWPQALAASATGGRT*VCHSFW
Trigger: CCAGAAACTGTGACAAACTCAAGTCCTTCCACCTGT...CGCTGAAGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAGTCCTGCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR TCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTTGCCCTGGCCTGACCTaGGGCAGCAGAACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPACPGLT*GSRTGE
Trigger: CTCACCAGTTCTGCTGCCTCAGGTCAGGCCAGGGCA...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAGCACTGCCCTGGCCTaGCCTGAGGCAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLSTALA*PEAAEL
Trigger: CAGTTCTGCTGCCTCAGGTCAGGCCAGGGCAGTGCT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGTGTGCCAGGGAGAGTaGCCTGCTGGAACTCCATGG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREVCQGE*PAGTPW
Trigger: CCATGGAGTTCCAGCAGGTCACTCTCCCTGGCACAC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACACCCTCGCCCATCCTaGGGTGCAGGAAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPHPRPS*GAGSTS
Trigger: GGAGGTGCTTCCTGCACCTCAGGATGGGCGAGGGTG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGATTCTGCCTCAGCTCTaGGCCCCTCAGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEILPQL*APQSGA
Trigger: GGCCCCACTCTGAGGGGCTCAGAGCTGAGGCAGAAT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCATTCTGCCTCAGCTCTaGGCCCCTCAGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRILPQL*APQSGA
Trigger: GGCCCCACTCTGAGGGGCTCAGAGCTGAGGCAGAAT...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGAGAGGCCGGAAGTaGCACTGTGAGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSQRGRK*HCEGRA
Trigger: TGCCCTCCCCTCACAGTGTCACTTCCGGCCTCTCTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALALLLGGGREEPRAVLLRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...AAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR GCA 90 bp GCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: ANLPAQQGHPALALLLGGSGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...TCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR GCA 90 bp CTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACTAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LVAGQHVGVVVLHHAAHTSGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...AGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTACATCTGGGAGGCCGTaGTTAGGGGGCGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPTSGRP*LGGGGG
Trigger: GCCACCCCCGCCCCCTAAGCACGGCCTCCCAGATGT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGTTTCCGGAGGCCGGGTaGGGTGGGCATGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAFPEAG*GGHGAQ
Trigger: CTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAA...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAATTTCCGGAGGCCGGGTaGGGTGGGCATGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQFPEAG*GGHGAQ
Trigger: CTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAA...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGTGATCGCTGGAGGTaGGGGAGCTGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAGDRWR*GSCGFS
Trigger: AGAGAAGCCGCAGCTCCCGCACCTCCAGCGATCACC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TCTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGGWAARGCGSAPPCCPHGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...GTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGGAGCCCCCAGTCCCTaGACACCCAGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGGAPSP*TPSCPG
Trigger: TCCAGGGCAGCTGGGTGTGCAGGGACTGGGGGCTCC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGAAGCAGCTGGCTaGCGTCATCTGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRLEAAG*RHLQGL
Trigger: CAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAG...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCTGGAAGCAGCTGGCTaGCGTCATCTGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSLEAAG*RHLQGL
Trigger: CAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGGGCACTGGGGGTGGTaGGTAAGCCGGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQGHWGW*VSRWVH
Trigger: ATGCACCCACCGGCTTACCCACCACCCCCAGTGCCC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCCTGGGCGTGGGCACTaGGGGTGGTGGGTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRSFFSWKWPISLRSKAIPGRGH*GWWVSR
Trigger: CCGGCTTACCCACCACCCCCAGTGCCCACGCCCAGG...GATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCTGGCTTCCTGGGCGTaGGCACTGGGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRLASWA*ALGVVG
Trigger: ACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAG...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGCATGTCAGAGAAGGCTaGCTTCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PISLRSKAIQLLRSSSEEHVREG*LPGRGH
Trigger: GTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATG...CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGCCAGGCCAACATCTaGGAGGCCGTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTSQANI*EAVLRG
Trigger: CCCCCTAAGCACGGCCTCCCAGATGTTGGCCTGGCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCGGGTGCGGTGGGCATaGTGCTCAGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQRVRWA*CSEGDR
Trigger: GCGATCCCCCTCTGAGCACCATGCCCACCGCACCCG...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGCTCCGGGCTGGGGCTaGCACTCTCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQAPGWG*HSPGSK
Trigger: CTTGCTTCCGGGAGAGTGCCAGCCCCAGCCCGGAGC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGCTCCGGGCTGGGGCTaGCACTCTCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAAPGWG*HSPGSK
Trigger: CTTGCTTCCGGGAGAGTGCCAGCCCCAGCCCGGAGC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGTGGAGCAGGCCCCGTaGCCAGGGGTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGVEQAP*PGVQGS
Trigger: GGAGCCCTGGACCCCTGGCCACGGGGCCTGCTCCAC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGTGGAGCAGGCCCCGTaGCCAGGGGTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAVEQAP*PGVQGS
Trigger: GGAGCCCTGGACCCCTGGCCACGGGGCCTGCTCCAC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATGGCAGCACTGGAAGTaGAGCAGGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPWQHWK*SRPRGQ
Trigger: CTGGCCACGGGGCCTGCTCCACTTCCAGTGCTGCCA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTATGGCAGCACTGGAAGTaGAGCAGGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTALAWQPHGLPSPRPSVWQHWK*SRPRGQ
Trigger: CTGGCCACGGGGCCTGCTCCACTTCCAGTGCTGCCA...TACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGTTGGCTGGCACAGGTaGGGGCTCAGATGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAVGWHR*GLRCGW
Trigger: CCACCCACATCTGAGCCCCCACCTGTGCCAGCCAAC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCACTGGGGGTGGTGGGTAAGCCGGTGGGTGCATCAGGGCATCCTCAAGCCTTCGGAACTTGGGCTTGTTaGCTGGCACAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALGVVGKPVGASGHPQAFGTWAC*LAQVGA
Trigger: AGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCC...GAAGGCTTGAGGATGCCCTGATGCACCCACCGGCTTACCCACCACCCCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGCATGGCTGCCTCCCTTaGGGGGTCCTCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALHGCLP*GVLFSY
Trigger: ATAGCTGAAGAGGACCCCCCAAGGGAGGCAGCCATG...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GCGSAPPCCPHSQTGPRPAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...AGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPSSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLASSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLASVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTCTCCAGCCTCGGCTGTaGTGCACTGACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPALQPRL*CTDLSP
Trigger: GGGTGAGAGGTCAGTGCACCACAGCCGAGGCTGGAG...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGATTAGCCAGGCGTGGTaGCGGGCGCCTGGAATCCCA +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEISQAW*RAPGIP
Trigger: TGGGATTCCAGGCGCCCGCCACCACGCCTGGCTAAT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCCCCAGGCACCAGGCTaGAAACCACATCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEPQAPG*KPHLAP
Trigger: GGGTGCGAGATGTGGTTTCCAGCCTGGTGCCTGGGG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGCAGGTGCAGAGTCTaGGAGGCGAGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTSRCRV*EARLDQ
Trigger: CTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCAGGGCCTGGGCTGGCTaGGGTCTGGGCTGCCGGTTA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGRAWAG*GLGCRL
Trigger: TAACCGGCAGCCCAGACCCCAGCCAGCCCAGGCCCT...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GTTAGTGCAGAAGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCGGGCCCGGGCTCACCTaGTGTCCAAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSAEGPPGQLMAHHWIEPGPGLT*CPRAGL
Trigger: AAGACCTGCCCTTGGACACCAGGTGAGCCCGGGCCC...GGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCTTCTGCACTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR TCA 90 bp CCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGTCCAGGAGGATCGATTaGGCCAGGAGTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPGQLMAHHWIEPSPGHASRRID*ARSSRR
Trigger: CCTCCTGGAACTCCTGGCTCAATCGATCCTCCTGGA...CGCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR TCA 90 bp TCTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGGWAARGCGSAPPCCPHRTPWC*RRPSWA
Trigger: TGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCT...GTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR TCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGTGGGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAGGQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGGCAGAGGTGGGACTTaGACCCAGGCCTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSGRGGT*TQASVR
Trigger: TCTCACAGAGGCCTGGGTTCAAGTCCCACCTCTGCC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGACCATCAGAGGTCGTaGGGGGTGGCAGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPDHQRS*GVAGSL
Trigger: CAGGCTCCCTGCCACCCCTCACGACCTCTGATGGTC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGACCATCAGAGGTCGTaGGGGGTGGCAGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGDHQRS*GVAGSL
Trigger: CAGGCTCCCTGCCACCCCTCACGACCTCTGATGGTC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGGCCCCCTTGGTTGAGTaGAAGCACCTCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLAPLVE*KHLQSP
Trigger: AGGGCTCTGGAGGTGCTTTCACTCAACCAAGGGGGC...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTACCCAAGCCCCAGAACTaGGCCCACCTGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALPKPQN*AHLNSS
Trigger: AGATGAGTTCAGGTGGGCTCAGTTCTGGGGCTTGGG...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCCCATGTTCCTGGTGTaGCCCTGGTGTCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLPMFLV*PWCPRP
Trigger: TGGCCTAGGACACCAGGGTCACACCAGGAACATGGG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAGGCTGACGGCTCCCTaGGAAACAGCGGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLARLTAP*ETAGPA
Trigger: GGCTGGTCCCGCTGTTTCTCAGGGAGCCGTCAGCCT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452765.7
CDS-3UTR GCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGGCCATTTCAGCAGCTaGAGCTGGGTACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRGHFSS*SWVPPF
Trigger: GAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGGCC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TTGTCCGTGGGGTACGGGGAAAGGCTGATATCCACAGGCCGCTCAACTGCGCCGGGCCATTTCAGCAGCTaGAGCTGGGTACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSVGYGERLISTGRSTAPGHFSS*SWVPPF
Trigger: GAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGGCC...CGGCGCAGTTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACCCCACGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRSGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp AATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NLPAQQGHPALALLLGGGHRPLN*AVEAVC
Trigger: ACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTG...GCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCTTTCCGGAGGCCGGGTaGGGTGGGCATGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGFPEAG*GGHGAQ
Trigger: CTGAGCACCATGCCCACCGCACCCGGCCTCCGGAAA...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: VTALAWQPHGLPSPRPSVAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...TACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp GCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: ANLPAQQGHPALALLLGGRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...TCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACAGCCTCGGCTGTGGTaGACTGACCTCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPQPRLW*TDLSPQ
Trigger: CTGGGGTGAGAGGTCAGTGCACCACAGCCGAGGCTG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTGGAGGACCACGGCCTaGCCCATCCCACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAWRTTA*PIPPQH
Trigger: GTGTTGGGGTGGGATGGGGCAGGCCGTGGTCCTCCA...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCTGGAGGACCACGGCCTaGCCCATCCCACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGWRTTA*PIPPQH
Trigger: GTGTTGGGGTGGGATGGGGCAGGCCGTGGTCCTCCA...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGACCCTGGGCTGGGGGTaGTTCCCAAAGCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQTLGWG*FPKPLG
Trigger: CCCCAGTGGCTTTGGGAAGCACCCCCAGCCCAGGGT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCACCCTGGGCTGGGGGTaGTTCCCAAAGCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGTLGWG*FPKPLG
Trigger: CCCCAGTGGCTTTGGGAAGCACCCCCAGCCCAGGGT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGTCGCCCATCCTGAGGTaGAGGAAGCACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWSPILR*RKHLPG
Trigger: CCCAGGGAGGTGCTTCCTGCACCTCAGGATGGGCGA...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGGGGTGTGTGCGAGGTaGCCAGCGAGGGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGGVCAR*PARGLM
Trigger: CATCAAGCCCCTCGCTGGGCACCTCGCACACACCCC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGGGGTGTGTGCGAGGTaGCCAGCGAGGGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPGVCAR*PARGLM
Trigger: CATCAAGCCCCTCGCTGGGCACCTCGCACACACCCC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCACGCCCCCAGGCATaGTTAGCAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQPRPQA*LAGSGH
Trigger: GTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCCACGCCCCCAGGCATaGTTAGCAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWPRPQA*LAGSGH
Trigger: GTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PALALLLGGGREEPRAVLKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...AAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCCGAGCTGGAGTCGCTaGTGTCCAAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRPSWSR*CPRAGL
Trigger: AAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGG...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAGAAGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCATGTCTGTGTCCGAGCTaGAGTCGCTGGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AEGPPGQLMAHHWIEPSPCLCPS*SRWCPR
Trigger: CCTTGGACACCAGCGACTCCAGCTCGGACACAGACA...TGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGGGCACTGGGGGTGGTaGGTAAGCCGGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQGHWGW*VSRWVH
Trigger: ATGCACCCACCGGCTTACCCACCACCCCCAGTGCCC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAATTGGAGGTAAAGGAGTaGGCCCGGGGCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWRELEVKE*ARGMSE
Trigger: CTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAA...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAGCCAGGCCAACATCTaGGAGGCCGTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPSQANI*EAVLRG
Trigger: CCCCCTAAGCACGGCCTCCCAGATGTTGGCCTGGCT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCACAGTGGGTCCCTCTTaGAGTCCTCAGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSTVGPS*SPQQPG
Trigger: GCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAPPRAQ*VPLGVL
Trigger: GAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACGGGTGCGGTGGGCATaGTGCTCAGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQRVRWA*CSEGDR
Trigger: GCGATCCCCCTCTGAGCACCATGCCCACCGCACCCG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAACTTAGAGGAGGCCGGGTGCGGTaGGCATGGTGCTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HHAAHTHKQDLALQVELRGGRVR*AWCSEG
Trigger: CCCCTCTGAGCACCATGCCCACCGCACCCGGCCTCC...TCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGGCAGCACTGGAAGTaGAGCAGGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPWQHWK*SRPRGQ
Trigger: CTGGCCACGGGGCCTGCTCCACTTCCAGTGCTGCCA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCTGGCAGCACTGGAAGTaGAGCAGGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGWQHWK*SRPRGQ
Trigger: CTGGCCACGGGGCCTGCTCCACTTCCAGTGCTGCCA...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGGTGGCTGGGCAGCACGTGGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCATGGCTGCCTCCCTTaGGGGGTCCTCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LVAGQHVGVVVLHHAAHTHGCLP*GVLFSY
Trigger: ATAGCTGAAGAGGACCCCCCAAGGGAGGCAGCCATG...AGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCTGCGGGCCGCGCCATaGCCTCAGGCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLLRAAP*PQALAA
Trigger: AGCTGCCAGTGCCTGAGGCCATGGCGCGGCCCGCAG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAAGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VLHHAAHTHKQDLALQVEAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...TTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCTTTCCACTTCGCAGGACTCCGTGGTGTTGACGAAGACCGAGTTGGGCAGTGGAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PFHFAGLRGVDEDRVGQWSSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...CCACTGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTGCGAAGTGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCTCCGTCTGTGTGGCCTaGGGTCAGGGCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGSVCVA*GQGPCD
Trigger: GTCACAGGGGCCCTGACCCCAGGCCACACAGACGGA...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRLEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp AGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACACAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPSRAAHGPSLDRAQPRTQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...TGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGGCCACAGTGGGGAGTaGCATGACTCCCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREGHSGE*HDSLSK
Trigger: CTTGCTTAGGGAGTCATGCCACTCCCCACTGTGGCC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGTGGTGGCGGGCGCCTaGAATCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQVVAGA*NPSYSG
Trigger: TCCCGAGTAGCTGGGATTCCAGGCGCCCGCCACCAC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGTGGTGGCGGGCGCCTaGAATCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQVVAGA*NPSYSG
Trigger: TCCCGAGTAGCTGGGATTCCAGGCGCCCGCCACCAC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGATTAGCCAGGCGTGGTaGCGGGCGCCTGGAATCCCA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAISQAW*RAPGIP
Trigger: TGGGATTCCAGGCGCCCGCCACCACGCCTGGCTAAT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAAGCAGGTGCAGAGTCTaGGAGGCGAGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQSRCRV*EARLDQ
Trigger: CTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCT...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGTGCTGTGGCCCCCTTaGTTGAGTGAAAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALVLWPP*LSESTS
Trigger: GGAGGTGCTTTCACTCAACCAAGGGGGCCACAGCAC...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGAGCAGGCAGTCTAGGTaGAGGGAACAGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDESRQSR*REQGVQ
Trigger: CTGCACGCCCTGTTCCCTCCACCTAGACTGCCTGCT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGGACAGGCAACCTCCTaGCACTGCCCCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGGQATS*HCPLSR
Trigger: CCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGCTCATGGCCCATCACTaGATAGAGCCCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ARPSSSCAPPRRRPRRTTLMAHH*IEPSPG
Trigger: TCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAG...CGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGGGTACGGGGAAAGGCTaGTATCCACAGGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLGTGKG*YPQAAQ
Trigger: TTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACC...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCGGTACGGGGAAAGGCTaGTATCCACAGGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTGTGKG*YPQAAQ
Trigger: TTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACC...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAAGGAGAAGCTCCTaGAACTCTGCCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSQRRSS*NSAHRG
Trigger: CCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTRTPWC*RRPSWA
Trigger: TGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGGGGGAAGTCACTCAGTaGCCTGCACCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLGEVTQ*PAPWKT
Trigger: TGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCC...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAGGCAGCAGAACTGGTaGGTGGGGTGTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQRQQNW*VGCGLP
Trigger: TGGGAGCCCACACCCCACTCACCAGTTCTGCTGCCT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAGGCAGCAGAACTGGTaGGTGGGGTGTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEARQQNW*VGCGLP
Trigger: TGGGAGCCCACACCCCACTCACCAGTTCTGCTGCCT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCCCTGGCCTGACCTaGGGCAGCAGAACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPCPGLT*GSRTGE
Trigger: CTCACCAGTTCTGCTGCCTCAGGTCAGGCCAGGGCA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGTGTGCCAGGGAGAGTaGCCTGCTGGAACTCCATGG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQVCQGE*PAGTPW
Trigger: CCATGGAGTTCCAGCAGGTCACTCTCCCTGGCACAC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGGCAGGAAAATCGCTTaGACTAGAGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALGRKIA*TREAEV
Trigger: CACCTCCGCCTCTCTAGTTCAAGCGATTTTCCTGCC...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGGTGGGCGGATCAGTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSGGRIS*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAACTGATCCGCCCACC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGGTGGGCGGATCAGTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRGGRIS*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAACTGATCCGCCCACC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACACCCTCGCCCATCCTaGGGTGCAGGAAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAHPRPS*GAGSTS
Trigger: GGAGGTGCTTCCTGCACCTCAGGATGGGCGAGGGTG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGCCCAGCGAGGGGCTTaGTGCTGCTGGGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQAQRGA*CCWVTE
Trigger: TTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGCCCAGCGAGGGGCTTaGTGCTGCTGGGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAAQRGA*CCWVTE
Trigger: TTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCAGAGAGGCCGGAAGTaGCACTGTGAGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAQRGRK*HCEGRA
Trigger: TGCCCTCCCCTCACAGTGTCACTTCCGGCCTCTCTG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCATCTCCCAGACATGTaGGGCCTGACGCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAHLPDM*GLTRLA
Trigger: AGCCAGGCGCGTCAGGCCTCACATGTCTGGGAGATG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435136.8
CDS-3UTR TCA 90 bp TTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGCGTGAAGCTGGAAACTaGTCCCGGCCTGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: LKGKTLLDVVSSAARITLREAGN*SRPGRT
Trigger: GGTCCTCCCAGGCCGGGATCAGTTTCCAGCTTCACG...CAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp GCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTAGCCCAGGACATGCGTaGAGCTGGAAACTGATCCCG +
Preference number: 4 (lower is better)
Translates to: ALALLLGGGREEPRAVLLSPGHA*SWKLIP
Trigger: CGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCT...AAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp GATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACGCAGGAACGAAGTCCTaGGGCAGGGCGGGTACGGGT +
Preference number: 4 (lower is better)
Translates to: DLEGENVVGRGLLSRPHHAGTKS*GRAGTG
Trigger: ACCCGTACCCGCCCTGCCTCAGGACTTCGTTCCTGC...GTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR GCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLASGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGTGGAGGTGCGGGAGCTaGGGCTTCTCTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGWRCGS*GFSGLG
Trigger: GCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCA...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTGGAGGTGCGGGAGCTaGGGCTTCTCTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAWRCGS*GFSGLG
Trigger: GCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCA...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTGGTGATCGCTGGAGGTaGGGGAGCTGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAGDRWR*GSCGFS
Trigger: AGAGAAGCCGCAGCTCCCGCACCTCCAGCGATCACC...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAAGGTGATCGCTGGAGGTaGGGGAGCTGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLHHAAHTHKQDLALQVEGDRWR*GSCGFS
Trigger: AGAGAAGCCGCAGCTCCCGCACCTCCAGCGATCACC...TTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGCACAGCCTTGCTCCTaGTCACCCTCCCATGTGGGC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGAQPCS*SPSHVG
Trigger: GCCCACATGGGAGGGTGAGCAGGAGCAAGGCTGTGC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCCCTGCACACCCAGCTaGCCTGGACACTGTGCCGTA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAPCTPS*PGHCAV
Trigger: TACGGCACAGTGTCCAGGGCAGCTGGGTGTGCAGGG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGTCATCTGCAGGGCCTaGAGTTCCACCGCACCCTAT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRVICRA*SSTAPY
Trigger: ATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGAC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTGGCTGCCGTCATCTaGAGGGCCTGCAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGLAAVI*RACSST
Trigger: GGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTATGGCTCCTTCTTCATaGTGGAGGACCACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAMAPSS*WRTTAC
Trigger: GCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCAT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCTCGCCCATCCTGAGGTaGAGGAAGCACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGSPILR*RKHLPG
Trigger: CCCAGGGAGGTGCTTCCTGCACCTCAGGATGGGCGA...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACCTCTGCCCCCAAAGTaGTGGCATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREPLPPK*WHYRCE
Trigger: CTCACACCTGTAATGCCAGCACTTTGGGGGCAGAGG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCACGCCCCCAGGCATaGTTAGCAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRPRPQA*LAGSGH
Trigger: GTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGG...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ARPSSSCAPPRRRPRRTTRGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...CGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGTGTCTGTGTCCGAGCTaGAGTCGCTGGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLCLCPS*SRWCPR
Trigger: CCTTGGACACCAGCGACTCCAGCTCGGACACAGACA...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGTTGGAGGTAAAGGAGTaGGCCCGGGGCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLLEVKE*ARGMSE
Trigger: CTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAA...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAGCCAGGCCAACATCTaGGAGGCCGTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGSQANI*EAVLRG
Trigger: CCCCCTAAGCACGGCCTCCCAGATGTTGGCCTGGCT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAGCCAGGCCAACATCTaGGAGGCCGTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEASQANI*EAVLRG
Trigger: CCCCCTAAGCACGGCCTCCCAGATGTTGGCCTGGCT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPPPRAQ*VPLGVL
Trigger: GAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCGGGTGCGGTGGGCATaGTGCTCAGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGRVRWA*CSEGDR
Trigger: GCGATCCCCCTCTGAGCACCATGCCCACCGCACCCG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGCTCCGGGCTGGGGCTaGCACTCTCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLAPGWG*HSPGSK
Trigger: CTTGCTTCCGGGAGAGTGCCAGCCCCAGCCCGGAGC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGCTCCGGGCTGGGGCTaGCACTCTCCCGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGAPGWG*HSPGSK
Trigger: CTTGCTTCCGGGAGAGTGCCAGCCCCAGCCCGGAGC...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGTTGGCTGGCACAGGTaGGGGCTCAGATGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQVGWHR*GLRCGW
Trigger: CCACCCACATCTGAGCCCCCACCTGTGCCAGCCAAC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAAGTTGGCTGGCACAGGTaGGGGCTCAGATGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VLHHAAHTHKQDLALQVEVGWHR*GLRCGW
Trigger: CCACCCACATCTGAGCCCCCACCTGTGCCAGCCAAC...TTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGGAACTTGGGCTTGTTaGCTGGCACAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VTALAWQPHGLPSPRPSVGTWAC*LAQVGA
Trigger: AGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCC...TACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAGCAGCAGGCTCTGGTaGCTGGGCAGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDSSRLW*LGSTWV
Trigger: CACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLALEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCAGTCCCTTCGTCCTCTaGAGCCTGGCGCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALSPFVL*SLAPGS
Trigger: TGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACT...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACA +
Preference number: 4 (lower is better)
Translates to: PSRAAHGPSLDRAQPRTCGTAWS*VSGIGT
Trigger: TGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCC...GCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGAAGACTTGGGCATCTaGGTACCACCGTCCCTACGC +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEEDLGI*VPPSLR
Trigger: GCGTAGGGACGGTGGTACCCAGATGCCCAAGTCTTC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGTCAGTCACTGTCAGTaGGCCCAAGTGCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALVSHCQ*AQVLTS
Trigger: TGAGGTCAGCACTTGGGCCCACTGACAGTGACTGAC...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTTTCCACCGCACCCTATaGCCCCCTGGGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPFHRTL*PPGVTA
Trigger: GGCTGTGACCCCAGGGGGCCATAGGGTGCGGTGGAA...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGTTCCTGGAAGCAGCTaGCTGCCGTCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPVPGSS*LPSSAG
Trigger: CCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAAC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCCAGCCTCGGCTGTaGTGCACTGACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEALQPRL*CTDLSP
Trigger: GGGTGAGAGGTCAGTGCACCACAGCCGAGGCTGGAG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTCTCCAGCCTCGGCTGTaGTGCACTGACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPLQPRL*CTDLSP
Trigger: GGGTGAGAGGTCAGTGCACCACAGCCGAGGCTGGAG...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGGCCACAGTGGGGAGTaGCATGACTCCCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEGHSGE*HDSLSK
Trigger: CTTGCTTAGGGAGTCATGCCACTCCCCACTGTGGCC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGTGGTGGCGGGCGCCTaGAATCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQVVAGA*NPSYSG
Trigger: TCCCGAGTAGCTGGGATTCCAGGCGCCCGCCACCAC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAAAATTAGCCAGGCGTaGTGGCGGGCGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLKISQA*WRAPGI
Trigger: GATTCCAGGCGCCCGCCACCACGCCTGGCTAATTTT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGACCAGGGCCCCAGCTaGGCTTCGGGTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLDQGPS*ASGNHR
Trigger: CCTGTGGTTACCCGAAGCCCAGCTGGGGCCCTGGTC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTTCTGGGAGGCGAGGCTaGACCAGGGCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSSGRRG*TRAPAG
Trigger: CCCAGCTGGGGCCCTGGTCCAGCCTCGCCTCCCAGA...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGCTCCTTCTTCATGCTaGAGGACCACGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGAPSSC*RTTACP
Trigger: GGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGCTCCTTCTTCATGCTaGAGGACCACGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRAPSSC*RTTACP
Trigger: GGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACTCCCCAGTGCTGTaGCCCCCTTGGTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSHSPVL*PPWLSE
Trigger: TTCACTCAACCAAGGGGGCCACAGCACTGGGGAGTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTGTTTCACCCTGGGCTaGGGGTGCTTCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRCFTLG*GCFPKP
Trigger: TGGCTTTGGGAAGCACCCCCAGCCCAGGGTGAAACA...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCAGGAAGCACCTCCCTaGGGCTGCGCTGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLQEAPP*GCAEPQ
Trigger: TTGGGGCTCAGCGCAGCCCCAGGGAGGTGCTTCCTG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCATTAGCTGGGCTTGGTaGTGTGGGCCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTISWAW*CGPVVP
Trigger: TGGGACCACAGGCCCACACCACCAAGCCCAGCTAAT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCGGGCTGGCTGGGGTCTaGGCTGCCGGTTATAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSKGRSFFSWKWPISLRSGLAGV*AAGYSH
Trigger: GTGGCTATAACCGGCAGCCCAGACCCCAGCCAGCCC...GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp TCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCAGGGCCTGGGCTGGCTaGGGTCTGGGCTGCCGGTTA +
Preference number: 4 (lower is better)
Translates to: SFFSWKWPISLRSKAIQLRAWAG*GLGCRL
Trigger: TAACCGGCAGCCCAGACCCCAGCCAGCCCAGGCCCT...GAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCTCATGGCCCATCACTaGATAGAGCCCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDELMAHH*IEPSPG
Trigger: TCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
3UTR CAA 72 bp ACTTGGGCATCTGGGTACCACCGTCCCTACGCACCCTaGGCCTGCTTAGGGTCCACTGTTCCCATCCCATCG +
Preference number: 4 (lower is better)
Translates to: TWASGYHRPYAP*ACLGSTVPIPS
Trigger: CGATGGGATGGGAACAGTGGACCCTAAGCAGGCCAAGGGTGCGTAGGGACGGTGGTACCCAGATGCCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTACAAAGGAGAAGCTCCTaGAACTCTGCCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: VTALAWQPHGLPSPRPSVQRRSS*NSAHRG
Trigger: CCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTG...TACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR TCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLARTPWC*RRPSWA
Trigger: TGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCATGCCCTGGCCTGACCTaGGGCAGCAGAACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQACPGLT*GSRTGE
Trigger: CTCACCAGTTCTGCTGCCTCAGGTCAGGCCAGGGCA...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCCCCAGACTGGGCTGTaGACTCAGCCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVPQTGL*TQPGQR
Trigger: CCTCTGGCCTGGCTGAGTTCACAGCCCAGTCTGGGG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGATTGGGGCTGGGCCTaGGCCAGGTATTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPDWGWA*ARYCLE
Trigger: TTCCAGGCAATACCTGGCTCAGGCCCAGCCCCAATC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAGTGGGCCCAAGTGCTaGCCTCAGTTTAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLSGPKC*PQFRFP
Trigger: GGGAAACCTAAACTGAGGTCAGCACTTGGGCCCACT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGAACCCAGGCCTCTGTaGGACTTGGTTCTCTCACCT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWREPRPL*DLVLSP
Trigger: AGGTGAGAGAACCAAGTCTCACAGAGGCCTGGGTTC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGGCAGAGGTGGGACTTaGACCCAGGCCTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQGRGGT*TQASVR
Trigger: TCTCACAGAGGCCTGGGTTCAAGTCCCACCTCTGCC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATGTGGCCCCCTTGGTTaGGTGAAAGCACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPCGPLG*VKAPPE
Trigger: CTCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGCCTGGCCAACATGGTaGAACCCCGGTTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEAWPTW*NPGSTK
Trigger: TTTAGTGGAACCGGGGTTTCACCATGTTGGCCAGGC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGGTGGGCGGATCAGTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPGGRIS*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAACTGATCCGCCCACC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCCCATGTTCCTGGTGTaGCCCTGGTGTCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAPMFLV*PWCPRP
Trigger: TGGCCTAGGACACCAGGGTCACACCAGGAACATGGG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGCCCAGCGAGGGGCTTaGTGCTGCTGGGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDAQRGA*CCWVTE
Trigger: TTCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGGACTCAAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLDSRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTTGAGTC...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACATCAGGCTGTCTTCTaGCGGCCTCGGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQHQAVF*RPRPGS
Trigger: TGACCCAGGCCGAGGCCGGCAGAAGACAGCCTGATG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356331.9
ENST00000515737.5
CDS-3UTR GCA 90 bp CCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGGCTATGATTGGCCACTaGTCTCCAGTCTGGGCAACT +
Preference number: 4 (lower is better)
Translates to: PPGQLMAHHWIEPSPGHAAMIGH*SPVWAT
Trigger: AGTTGCCCAGACTGGAGAGCAGTGGCCAATCATAGC...CGCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAHRPLN*AVEAVC
Trigger: ACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGTGCGGTGGGCATGGTaGTCAGAGGGGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPVRWAW*SEGDRS
Trigger: TGAGCGATCCCCCTCTGAGCACCATGCCCACCGCAC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GTCCCACACAACCAGGACCTTCCCCGACTTGGTAGAGGAGTTCCGGATGCAGTAGTGCGGTGGGCATGGTaGTCAGAGGGGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: VPHNQDLPRLGRGVPDAVVRWAW*SEGDRS
Trigger: TGAGCGATCCCCCTCTGAGCACCATGCCCACCGCAC...TACTGCATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCTGGTTGTGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGTTCCCGGGTACTGCTaGGGTCACCACTTAGACATC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSVPGYC*GHHLDI
Trigger: GATGTCTAAGTGGTGACCGCAGCAGTACCCGGGAAC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGGGGTTCCCGGGTACTaGTGCGGTCACCACTTAGAC +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGGVPGY*CGHHLD
Trigger: GTCTAAGTGGTGACCGCAGCAGTACCCGGGAACCCC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQAPSPD*PSLGPD
Trigger: ATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCTGGCTGCCGTCATCTaGAGGGCCTGCAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDLAAVI*RACSST
Trigger: GGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCTGGAAGCAGCTGGCTaGCGTCATCTGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDLEAAG*RHLQGL
Trigger: CAGGCCCTGCAGATGACGGCAGCCAGCTGCTTCCAG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAACAGAAGCTCCCTGTaGTCCAGCCTCGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPNRSSL*SSLGCG
Trigger: ACCACAGCCGAGGCTGGAGCACAGGGAGCTTCTGTT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCGGAGATCACGGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGRRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTCTGGGCCCCAGGATaGTTTAGCCACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGLWAPG*FSHLSR
Trigger: CCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTAGCTGTGCTAGCAGGTaGAGAGTCTGGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPSCASR*RVWEAR
Trigger: CCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGAGCTGTGCTAGCAGGTaGAGAGTCTGGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQSCASR*RVWEAR
Trigger: CCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGTGGAGGACCACGGCCTaGCCCATCCCACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLWRTTA*PIPPQH
Trigger: GTGTTGGGGTGGGATGGGGCAGGCCGTGGTCCTCCA...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGTCTTCACAGGGTCACTaGCCCTCTTCCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDESSQGH*PSSPRT
Trigger: TGTCCTTGGGGAAGAGGGGCAGTGACCCTGTGAAGA...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCCTCTGCCCCCAAAGTaGTGGCATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTPLPPK*WHYRCE
Trigger: CTCACACCTGTAATGCCAGCACTTTGGGGGCAGAGG...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACCACGCCCCCAGGCATaGTTAGCAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQPRPQA*LAGSGH
Trigger: GTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPARGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SSSCAPPRRRPRRTTCGAFFSWK*PISLRS
Trigger: GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAA...AGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTCCGAGCTGGAGTCGCTaGTGTCCAAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAPSWSR*CPRAGL
Trigger: AAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGG...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCCGAGCTGGAGTCGCTaGTGTCCAAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGPSWSR*CPRAGL
Trigger: AAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGTGGTGGGTAAGCCGGTaGGTGCATCAGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQWWVSR*VHQGIL
Trigger: GAGGATGCCCTGATGCACCCACCGGCTTACCCACCA...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTATGGTGGGTAAGCCGGTaGGTGCATCAGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VVLHHAAHTHKQDLALQVWWVSR*VHQGIL
Trigger: GAGGATGCCCTGATGCACCCACCGGCTTACCCACCA...TACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGGGCACTGGGGGTGGTaGGTAAGCCGGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QVFLFVEVANLPAQQGHPGHWGW*VSRWVH
Trigger: ATGCACCCACCGGCTTACCCACCACCCCCAGTGCCC...TGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCACAGTGGGTCCCTCTTaGAGTCCTCAGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEATVGPS*SPQQPG
Trigger: GCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTTGGCAGCACTGGAAGTaGAGCAGGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGWQHWK*SRPRGQ
Trigger: CTGGCCACGGGGCCTGCTCCACTTCCAGTGCTGCCA...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGTTGGCTGGCACAGGTaGGGGCTCAGATGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQVGWHR*GLRCGW
Trigger: CCACCCACATCTGAGCCCCCACCTGTGCCAGCCAAC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTACTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VVLHHAAHTHKQDLALQVLGLVG*HRWGLR
Trigger: TCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAG...TACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGGAACTTGGGCTTGTTaGCTGGCACAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAGTWAC*LAQVGA
Trigger: AGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGGAACTTGGGCTTGTTaGCTGGCACAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGGTWAC*LAQVGA
Trigger: AGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGCAGGCTCTGGTGGCTaGGCAGCACGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGAGSGG*AARGCG
Trigger: ACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGC...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCCATGTCCGTCTGTGTaGCCTGGGGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGPCPSV*PGVRAP
Trigger: AGGGGCCCTGACCCCAGGCCACACAGACGGACATGG...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CGSAPPCCPHSQTGPRPPAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...TGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGAGTCCCTTCGTCCTCTaGAGCCTGGCGCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQSPFVL*SLAPGS
Trigger: TGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEGNSPY*SLCLSV
Trigger: AACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGCAGCAGCACTGCCCTaGCCTGACCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVAAALP*PDLRQQ
Trigger: CTGCTGCCTCAGGTCAGGCCAGGGCAGTGCTGCTGC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGCAGCAGCACTGCCCTaGCCTGACCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGAAALP*PDLRQQ
Trigger: CTGCTGCCTCAGGTCAGGCCAGGGCAGTGCTGCTGC...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGCAGCAGCACTGCCCTaGCCTGACCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAAAALP*PDLRQQ
Trigger: CTGCTGCCTCAGGTCAGGCCAGGGCAGTGCTGCTGC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCACCGCACCCTATaGCCCCCTGGGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAFHRTL*PPGVTA
Trigger: GGCTGTGACCCCAGGGGGCCATAGGGTGCGGTGGAA...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGTTCCTGGAAGCAGCTaGCTGCCGTCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGVPGSS*LPSSAG
Trigger: CCCTGCAGATGACGGCAGCCAGCTGCTTCCAGGAAC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACTGCAGAGGTGGCCTTaGACACCTGGTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQLQRWP*TPGSWK
Trigger: CTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTGCAGAGGTGGCCTTaGACACCTGGTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLALQRWP*TPGSWK
Trigger: CTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATATTAGCCAGGCGTGGTaGCGGGCGCCTGGAATCCCA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDISQAW*RAPGIP
Trigger: TGGGATTCCAGGCGCCCGCCACCACGCCTGGCTAAT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCCTCAACTGTCCAGTTaGCCAGAGGGACCTATCACC +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTPQLSS*PEGPIT
Trigger: GGTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGG...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGACCAGGGCCCCAGCTaGGCTTCGGGTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVDQGPS*ASGNHR
Trigger: CCTGTGGTTACCCGAAGCCCAGCTGGGGCCCTGGTC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGCTCCTTCTTCATGCTaGAGGACCACGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDAPSSC*RTTACP
Trigger: GGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGTCTCGGGAGGTCATaGGAACTCCTCATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTSLGRS*ELLMAP
Trigger: AGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTAGTCTCGGGAGGTCATaGGAACTCCTCATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPASLGRS*ELLMAP
Trigger: AGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGAGAGGTCGTGAGGGGTaGCAGGGAGCCTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLARGREG*QGAWQG
Trigger: TCCCTGCCAGGCTCCCTGCCACCCCTCACGACCTCT...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGTGCTGTGGCCCCCTTaGTTGAGTGAAAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPVLWPP*LSESTS
Trigger: GGAGGTGCTTTCACTCAACCAAGGGGGCCACAGCAC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGGTGCTGTGGCCCCCTTaGTTGAGTGAAAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAVLWPP*LSESTS
Trigger: GGAGGTGCTTTCACTCAACCAAGGGGGCCACAGCAC...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCATCCCTCCAGCGCCTaGATCACCCTCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAHPSSA*ITLKSL
Trigger: GAGGCTTTTGAGGGTGATCCAGGCGCTGGAGGGATG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCAGAAACAGAGGTTGTaGCCCTTCCCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRQKQRL*PFPHSP
Trigger: AGGGGAATGGGGGAAGGGCCACAACCTCTGTTTCTG...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGAAACAGAGGTTGTaGCCCTTCCCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSQKQRL*PFPHSP
Trigger: AGGGGAATGGGGGAAGGGCCACAACCTCTGTTTCTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTACACACACTTCTGAGGTaGTGGGGGTTGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALHTLLR*WGLSVK
Trigger: CTTGACAGACAACCCCCACCACCTCAGAAGTGTGTG...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCAGCTGTCTGGCAGCCTaGAAGGCCTGCGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGSCLAA*KACEAS
Trigger: GGAAGCTTCGCAGGCCTTCCAGGCTGCCAGACAGCT...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAAAAATTAGCTGGGCTTaGTGGTGTGGGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREKISWA*WCGPVV
Trigger: GACCACAGGCCCACACCACCAAGCCCAGCTAATTTT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAACTGATCCCGGCCTaGGAGGACCCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSKGRSFFSWKWPISLRSKLIPA*EDPGAG
Trigger: CCCTGCTCCAGGGTCCTCCCAGGCCGGGATCAGTTT...GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGGAGGCAGTAAGCTATaGTTGGCCACTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPGGSKL*LATALQ
Trigger: CTGGAGAGCAGTGGCCAATCATAGCTTACTGCCTCC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356331.9
CDS-3UTR TCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTCCAGGAGGATCGATTaGGCCAGGAGTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPSRRID*ARSSRR
Trigger: CCTCCTGGAACTCCTGGCTCAATCGATCCTCCTGGA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356331.9
ENST00000515737.5
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGGGGAAGTCACTCAGTaGCCTGCACCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQGEVTQ*PAPWKT
Trigger: TGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGGGGAAGTCACTCAGTaGCCTGCACCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGGEVTQ*PAPWKT
Trigger: TGTCTTCCAGGGTGCAGGTCACTGAGTGACTTCCCC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGGCAGCAGAACTGGTaGGTGGGGTGTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGRQQNW*VGCGLP
Trigger: TGGGAGCCCACACCCCACTCACCAGTTCTGCTGCCT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGCACTGCCCTGGCCTaGCCTGAGGCAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGSTALA*PEAAEL
Trigger: CAGTTCTGCTGCCTCAGGTCAGGCCAGGGCAGTGCT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAGTGGGCCCAAGTGCTaGCCTCAGTTTAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPSGPKC*PQFRFP
Trigger: GGGAAACCTAAACTGAGGTCAGCACTTGGGCCCACT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCAGGGCAAAGAATTCTaGCTGCAGGGAGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEQGKEF*LQGGGM
Trigger: CATTCCTCCTCCCTGCAGTCAGAATTCTTTGCCCTG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAGTGGGGAGTGGCATaGCTCCCTAAGCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQWGVA*LPKQVQ
Trigger: CTGAACTTGCTTAGGGAGTCATGCCACTCCCCACTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGGCAGGAAAATCGCTTaGACTAGAGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPGRKIA*TREAEV
Trigger: CACCTCCGCCTCTCTAGTTCAAGCGATTTTCCTGCC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGGTGGGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAGGQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGGCAGAGGTGGGACTTaGACCCAGGCCTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAGRGGT*TQASVR
Trigger: TCTCACAGAGGCCTGGGTTCAAGTCCCACCTCTGCC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCCCCCTTGGTTGAGTaGAAGCACCTCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQAPLVE*KHLQSP
Trigger: AGGGCTCTGGAGGTGCTTTCACTCAACCAAGGGGGC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTGTGGCCCCCTTGGTTaGGTGAAAGCACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQCGPLG*VKAPPE
Trigger: CTCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGAGGGCAACGCAGGGTaGGGCGGGGCAGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQEGNAG*GGAVSL
Trigger: GAGTGAAACTGCCCCGCCTCACCCTGCGTTGCCCTC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGAGGGCAACGCAGGGTaGGGCGGGGCAGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSEGNAG*GGAVSL
Trigger: GAGTGAAACTGCCCCGCCTCACCCTGCGTTGCCCTC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGCCCAAGCCCCAGAACTaGGCCCACCTGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQPKPQN*AHLNSS
Trigger: AGATGAGTTCAGGTGGGCTCAGTTCTGGGGCTTGGG...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCCCATGTTCCTGGTGTaGCCCTGGTGTCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDPMFLV*PWCPRP
Trigger: TGGCCTAGGACACCAGGGTCACACCAGGAACATGGG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGGCCATTTCAGCAGCTaGAGCTGGGTACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQGHFSS*SWVPPF
Trigger: GAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGGCC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CGGGCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCGGCCATTTCAGCAGCTaGAGCTGGGTACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RAHLVSKGRSFFSWKWPIGHFSS*SWVPPF
Trigger: GAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGGCC...GATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPHRPLN*AVEAVC
Trigger: ACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTG...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGTGCGGTGGGCATGGTaGTCAGAGGGGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVVRWAW*SEGDRS
Trigger: TGAGCGATCCCCCTCTGAGCACCATGCCCACCGCAC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGTGCGGTGGGCATGGTaGTCAGAGGGGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAVRWAW*SEGDRS
Trigger: TGAGCGATCCCCCTCTGAGCACCATGCCCACCGCAC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GATATGGATGATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCTGGAGGTGCGGGAGCTaGGGCTTCTCTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DMDDLEGENVVGRGLLSRWRCGS*GFSGLG
Trigger: GCCCAGGCCAGAGAAGCCGCAGCTCCCGCACCTCCA...GCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDESAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLARQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAAGTCACTCAGTGACCTaGACCCTGGAAGACAAGACA +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWRESHSVT*TLEDKT
Trigger: TGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGTCATCTGCAGGGCCTaGAGTTCCACCGCACCCTAT +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGVICRA*SSTAPY
Trigger: ATAGGGTGCGGTGGAACTGCAGGCCCTGCAGATGAC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCTGGCTGCCGTCATCTaGAGGGCCTGCAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGLAAVI*RACSST
Trigger: GGTGGAACTGCAGGCCCTGCAGATGACGGCAGCCAG...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACGGAGATCACGGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQARRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACTCTGGGCCCCAGGATaGTTTAGCCACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQLWAPG*FSHLSR
Trigger: CCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGCTGTGCTAGCAGGTaGAGAGTCTGGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPSCASR*RVWEAR
Trigger: CCTCGCCTCCCAGACTCTGCACCTGCTAGCACAGCT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTTCGCCCATCCTGAGGTaGAGGAAGCACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGSPILR*RKHLPG
Trigger: CCCAGGGAGGTGCTTCCTGCACCTCAGGATGGGCGA...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGGCCCCAATAAGCCCTaGCTGCCTCAGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQGPNKP*LPQGTK
Trigger: CTTAGTTCCCTGAGGCAGGCAGGGCTTATTGGGGCC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGCCTGACTCAAGGCTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTSLTQG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAGCCTTGAGTCAGGCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGCAGTAAGCTATGATTaGCCACTGCTCTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREAVSYD*PLLSSL
Trigger: CAGACTGGAGAGCAGTGGCCAATCATAGCTTACTGC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356331.9
CDS-3UTR CCA 90 bp CAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCACCACGCCCCCAGGCATaGTTAGCAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QVFLFVEVANLPAQQGHPPRPQA*LAGSGH
Trigger: GTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGG...TGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTTCAGCAGCTGCAGCTaGGTACCGCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQFSSCS*VPPFLC
Trigger: GCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCTTCAGCAGCTGCAGCTaGGTACCGCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGFSSCS*VPPFLC
Trigger: GCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAA...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLARGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAATGGTGGGTAAGCCGGTaGGTGCATCAGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQWWVSR*VHQGIL
Trigger: GAGGATGCCCTGATGCACCCACCGGCTTACCCACCA...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGTGGGTAAGCCGGTaGGTGCATCAGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLWWVSR*VHQGIL
Trigger: GAGGATGCCCTGATGCACCCACCGGCTTACCCACCA...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAACTGGCTTCCTGGGCGTaGGCACTGGGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GGREEPRAVLLADMDDLELASWA*ALGVVG
Trigger: ACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAG...TTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTTGGAGGTAAAGGAGTaGGCCCGGGGCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPLEVKE*ARGMSE
Trigger: CTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTTGGCAGCACTGGAAGTaGAGCAGGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGGREEPRAVLLADMDDLWQHWK*SRPRGQ
Trigger: CTGGCCACGGGGCCTGCTCCACTTCCAGTGCTGCCA...AAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGTTGGCTGGCACAGGTaGGGGCTCAGATGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAVGWHR*GLRCGW
Trigger: CCACCCACATCTGAGCCCCCACCTGTGCCAGCCAAC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPLGLVG*HRWGLR
Trigger: TCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCATGGCTGCCTCCCTTaGGGGGTCCTCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGHGCLP*GVLFSY
Trigger: ATAGCTGAAGAGGACCCCCCAAGGGAGGCAGCCATG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGACCGAGTTGGGCAGTaGCACCTTCTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPDRVGQ*HLLIVL
Trigger: GAGGACTATGAGAAGGTGCCACTGCCCAACTCGGTC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGACCGAGTTGGGCAGTaGCACCTTCTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VTALAWQPHGLPSPRPSVDRVGQ*HLLIVL
Trigger: GAGGACTATGAGAAGGTGCCACTGCCCAACTCGGTC...TACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDLEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLLEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACAGGGCAAGTTAGTGTaGGGCAACAGAGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQQGKLV*GNRVPS
Trigger: CGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAGTAWS*VSGIGT
Trigger: TGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCC...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAGNSPY*SLCLSV
Trigger: AACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCC...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCACTCGCTGTGCACCCTaGGGAAGTCACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGTRCAP*GSHSVT
Trigger: GGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGT...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGACTCGCTGTGCACCCTaGGGAAGTCACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQTRCAP*GSHSVT
Trigger: GGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAAGTGTATGCAAGTTCTaGAACGGGGACAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWRESVCKF*NGDSHS
Trigger: TGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTGAAGACTTGGGCATCTaGGTACCACCGTCCCTACGC +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAEDLGI*VPPSLR
Trigger: GCGTAGGGACGGTGGTACCCAGATGCCCAAGTCTTC...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGAAGACTTGGGCATCTaGGTACCACCGTCCCTACGC +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPEDLGI*VPPSLR
Trigger: GCGTAGGGACGGTGGTACCCAGATGCCCAAGTCTTC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCGGGAGAGTGACCTGCTaGAACTCCATGGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTGRVTC*NSMAES
Trigger: ACTTTCTGCCATGGAGTTCCAGCAGGTCACTCTCCC...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGTTCCACCGCACCCTATaGCCCCCTGGGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQFHRTL*PPGVTA
Trigger: GGCTGTGACCCCAGGGGGCCATAGGGTGCGGTGGAA...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAAACCCCTGCAGAGGTaGCCTTGGACACCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQKPLQR*PWTPGS
Trigger: GGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGGCCACAGTGGGGAGTaGCATGACTCCCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGGHSGE*HDSLSK
Trigger: CTTGCTTAGGGAGTCATGCCACTCCCCACTGTGGCC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTCAGGAAGAGAAACTATaGCCACAGTGGGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAQEEKL*PQWGVA
Trigger: TGCCACTCCCCACTGTGGCCATAGTTTCTCTTCCTG...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCCCCAGGCACCAGGCTaGAAACCACATCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVPQAPG*KPHLAP
Trigger: GGGTGCGAGATGTGGTTTCCAGCCTGGTGCCTGGGG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTATCACCTGGCTCTaGGCCCCAGGATGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGPITWL*APGCFS
Trigger: GCTAAAGCATCCTGGGGCCCAGAGCCAGGTGATAGG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACCTCAACTGTCCAGTTaGCCAGAGGGACCTATCACC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPPQLSS*PEGPIT
Trigger: GGTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAGCTCACACAGACGTaGACAGCTGTGCTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQLTQT*TAVLAG
Trigger: ACCTGCTAGCACAGCTGTCCACGTCTGTGTGAGCTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCAGCTCACACAGACGTaGACAGCTGTGCTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAQLTQT*TAVLAG
Trigger: ACCTGCTAGCACAGCTGTCCACGTCTGTGTGAGCTG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCACTCCCCAGTGCTGTaGCCCCCTTGGTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGHSPVL*PPWLSE
Trigger: TTCACTCAACCAAGGGGGCCACAGCACTGGGGAGTG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGAAGCATGTTTCACCCTaGGCTGGGGGTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWKHVSP*AGGASQ
Trigger: TTGGGAAGCACCCCCAGCCCAGGGTGAAACATGCTT...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGAGCTCCGCACAACGTaGCCCAGAAGGATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPELRTT*PRRISG
Trigger: CCCACTGATCCTTCTGGGCCACGTTGTGCGGAGCTC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCATCCCTCCAGCGCCTaGATCACCCTCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQHPSSA*ITLKSL
Trigger: GAGGCTTTTGAGGGTGATCCAGGCGCTGGAGGGATG...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGGACAGGCAACCTCCTaGCACTGCCCCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSGQATS*HCPLSR
Trigger: CCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGGACAGGCAACCTCCTaGCACTGCCCCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQGQATS*HCPLSR
Trigger: CCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGGAGGCAGTAAGCTATaGTTGGCCACTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQGGSKL*LATALQ
Trigger: CTGGAGAGCAGTGGCCAATCATAGCTTACTGCCTCC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356331.9
ENST00000515737.5
CDS-3UTR TCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGGTACGGGGAAAGGCTaGTATCCACAGGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPGTGKG*YPQAAQ
Trigger: TTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGGTACGGGGAAAGGCTaGTATCCACAGGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLGTGKG*YPQAAQ
Trigger: TTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp AGGGCCCCTGTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGACAGGTGGAAGGACTTaGGTTTGTCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAPVTALAWQPHGLPSPRTGGRT*VCHSFW
Trigger: CCAGAAACTGTGACAAACTCAAGTCCTTCCACCTGT...CCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR TCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACAAAGGAGAAGCTCCTaGAACTCTGCCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQQRRSS*NSAHRG
Trigger: CCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLRTPWC*RRPSWA
Trigger: TGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACCCCAGACTGGGCTGTaGACTCAGCCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSPQTGL*TQPGQR
Trigger: CCTCTGGCCTGGCTGAGTTCACAGCCCAGTCTGGGG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGATTGGGGCTGGGCCTaGGCCAGGTATTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGDWGWA*ARYCLE
Trigger: TTCCAGGCAATACCTGGCTCAGGCCCAGCCCCAATC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTCAGTGGGGAGTGGCATaGCTCCCTAAGCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAQWGVA*LPKQVQ
Trigger: CTGAACTTGCTTAGGGAGTCATGCCACTCCCCACTG...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGGCCTGGGCGACAGGGTaGGACTACATCTCAAAAACA +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWAWATG*DYISKT
Trigger: TGTTTTTGAGATGTAGTCTCACCCTGTCGCCCAGGC...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGAACCCAGGCCTCTGTaGGACTTGGTTCTCTCACCT +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQEPRPL*DLVLSP
Trigger: AGGTGAGAGAACCAAGTCTCACAGAGGCCTGGGTTC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCATGTGGCCCCCTTGGTTaGGTGAAAGCACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQACGPLG*VKAPPE
Trigger: CTCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACA...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGAGGGCAACGCAGGGTaGGGCGGGGCAGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSEGNAG*GGAVSL
Trigger: GAGTGAAACTGCCCCGCCTCACCCTGCGTTGCCCTC...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGCCTGGCCAACATGGTaGAACCCCGGTTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAAWPTW*NPGSTK
Trigger: TTTAGTGGAACCGGGGTTTCACCATGTTGGCCAGGC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTACTCACACACACTTCTaGGGTGGTGGGGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPTHTHF*GGGGCL
Trigger: CAGACAACCCCCACCACCTCAGAAGTGTGTGTGAGT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTACTCACACACACTTCTaGGGTGGTGGGGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLATHTHF*GGGGCL
Trigger: CAGACAACCCCCACCACCTCAGAAGTGTGTGTGAGT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGATTCTGCCTCAGCTCTaGGCCCCTCAGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQILPQL*APQSGA
Trigger: GGCCCCACTCTGAGGGGCTCAGAGCTGAGGCAGAAT...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCAGAGAGGCCGGAAGTaGCACTGTGAGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQQRGRK*HCEGRA
Trigger: TGCCCTCCCCTCACAGTGTCACTTCCGGCCTCTCTG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCTTGAGTCTAGGAGTTTaGGACCAGCTGGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSLSLGV*DQLGHS
Trigger: ACTATGCCCCAGCTGGTCTCAAACTCCTAGACTCAA...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATG +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREKNHVR*FLLIWM
Trigger: CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACAAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATG +
Preference number: 4 (lower is better)
Translates to: RPSRAAHGPSLDRAQPRTKNHVR*FLLIWM
Trigger: CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT...TGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAGGCCATCCAGCTCTTaGGCTCCTCCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSRPSSS*APPRRR
Trigger: CCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGSGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQHRPLN*AVEAVC
Trigger: ACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGTGCGGTGGGCATGGTaGTCAGAGGGGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQVRWAW*SEGDRS
Trigger: TGAGCGATCCCCCTCTGAGCACCATGCCCACCGCAC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GCGSAPPCCPHSQTGPRPSAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...AGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR GCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGGCAAAGCTCACTGCTaGTTTATTGGAGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSGKAHC*FIGGNS
Trigger: GCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACAAGGCAAAGCTCACTaGTGCTTTATTGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREQGKAH*CFIGGN
Trigger: GTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCCTTG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGTTCCCGGGTACTGCTaGGGTCACCACTTAGACATC +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPVPGYC*GHHLDI
Trigger: GATGTCTAAGTGGTGACCGCAGCAGTACCCGGGAAC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTGTTCCCGGGTACTGCTaGGGTCACCACTTAGACATC +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAVPGYC*GHHLDI
Trigger: GATGTCTAAGTGGTGACCGCAGCAGTACCCGGGAAC...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGAGCCCGCTCAGTGTATaGAAGTTCTGGAACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRSPLSV*KFWNGD
Trigger: GTCCCCGTTCCAGAACTTGCATACACTGAGCGGGCT...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCAGGGAGAGTGACCTaGTGGAACTCCATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRPGRVT*WNSMAE
Trigger: TTCTGCCATGGAGTTCCAGCAGGTCACTCTCCCTGG...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCCAGGGAGAGTGACCTaGTGGAACTCCATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAPGRVT*WNSMAE
Trigger: TTCTGCCATGGAGTTCCAGCAGGTCACTCTCCCTGG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCAGCCTCGGCTGTGGTaGACTGACCTCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQQPRLW*TDLSPQ
Trigger: CTGGGGTGAGAGGTCAGTGCACCACAGCCGAGGCTG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGCTCTGGGCCCCAGGATaGTTTAGCCACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLALWAPG*FSHLSR
Trigger: CCGGCTCAAGTGGCTAAAGCATCCTGGGGCCCAGAG...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATATGGCTCCTTCTTCATaGTGGAGGACCACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDMAPSS*WRTTAC
Trigger: GCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCAT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCCAATAAGCCCTGCCTaGCTCAGGGAACTAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDPISPA*LRELSR
Trigger: GCGGCTTAGTTCCCTGAGGCAGGCAGGGCTTATTGG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCCAATAAGCCCTGCCTaGCTCAGGGAACTAAGCCGC +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPPISPA*LRELSR
Trigger: GCGGCTTAGTTCCCTGAGGCAGGCAGGGCTTATTGG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGGCCCCAATAAGCCCTaGCTGCCTCAGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLGPNKP*LPQGTK
Trigger: CTTAGTTCCCTGAGGCAGGCAGGGCTTATTGGGGCC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTATGAAAAAGGGATTCTaGCTCAGCTCTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAMKKGF*LSSEPL
Trigger: GAGGGGCTCAGAGCTGAGGCAGAATCCCTTTTTCAT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGAGCCTGACTCAAGGCTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWSLTQG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAGCCTTGAGTCAGGCT...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAATGGTTAGCAGGTTCTaGGCACCAATGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: GQATSWHCPLSRQSRWREMVSRF*APMAFI
Trigger: TATGAAGGCCATTGGTGCCCAGAACCTGCTAACCAT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTTCAGCAGCTGCAGCTaGGTACCGCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLFSSCS*VPPFLC
Trigger: GCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAA...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAATTCAGCAGCTGCAGCTaGGTACCGCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQFSSCS*VPPFLC
Trigger: GCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAA...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTTTCAGCAGCTGCAGCTaGGTACCGCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPFSSCS*VPPFLC
Trigger: GCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAA...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: DLEGENVVGRGLLSRPHHKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...GTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGRGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPFFSWK*PISLRS
Trigger: GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCCGAGCTGGAGTCGCTaGTGTCCAAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVPSWSR*CPRAGL
Trigger: AAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTTGTCTGTGTCCGAGCTaGAGTCGCTGGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPCLCPS*SRWCPR
Trigger: CCTTGGACACCAGCGACTCCAGCTCGGACACAGACA...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATTGTCTGTGTCCGAGCTaGAGTCGCTGGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDCLCPS*SRWCPR
Trigger: CCTTGGACACCAGCGACTCCAGCTCGGACACAGACA...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTGGTGGGTAAGCCGGTaGGTGCATCAGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVWWVSR*VHQGIL
Trigger: GAGGATGCCCTGATGCACCCACCGGCTTACCCACCA...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGGGCACTGGGGGTGGTaGGTAAGCCGGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSGHWGW*VSRWVH
Trigger: ATGCACCCACCGGCTTACCCACCACCCCCAGTGCCC...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACCTGGCTTCCTGGGCGTaGGCACTGGGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHLASWA*ALGVVG
Trigger: ACCCACCACCCCCAGTGCCCACGCCCAGGAAGCCAG...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCATGTCAGAGAAGGCTaGCTTCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGHVREG*LPGRGH
Trigger: GTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCATGTCAGAGAAGGCTaGCTTCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLHVREG*LPGRGH
Trigger: GTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCATGTCAGAGAAGGCTaGCTTCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVHVREG*LPGRGH
Trigger: GTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAATTGGAGGTAAAGGAGTaGGCCCGGGGCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQLEVKE*ARGMSE
Trigger: CTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAA...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTACAGTGGGTCCCTCTTaGAGTCCTCAGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGTVGPS*SPQQPG
Trigger: GCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGACAGTGGGTCCCTCTTaGAGTCCTCAGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLATVGPS*SPQQPG
Trigger: GCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGT...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLLGLVG*HRWGLR
Trigger: TCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGGAACTTGGGCTTGTTaGCTGGCACAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAGTWAC*LAQVGA
Trigger: AGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCATGGCTGCCTCCCTTaGGGGGTCCTCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDHGCLP*GVLFSY
Trigger: ATAGCTGAAGAGGACCCCCCAAGGGAGGCAGCCATG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAACTTAGAGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: HHAAHTHKQDLALQVELRVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...TCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp CTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTGTGACTGCCTTGGCCTaGCAGCCACATGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSFRGSGQSPCAARPSSSVTALA*QPHGLP
Trigger: TGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCAC...AGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTTAGTGCAGAAGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: VSAEGPPGQLMAHHWIEPLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...GGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCTTCTGCACTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLALVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: VVLHHAAHTHKQDLALQVGNSPY*SLCLSV
Trigger: AACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCC...TACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTTCACTGCTGCTTTATTaGAGGCAACAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPASLLLY*RQQPLL
Trigger: CAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGA...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAACTCGCTGTGCACCCTaGGGAAGTCACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQATRCAP*GSHSVT
Trigger: GGTCACTGAGTGACTTCCCCAGGGTGCACAGCGAGT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGATTGCCTGGAAGACTTaGGCATCTGGGTACCACCGT +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWIAWKT*ASGYHR
Trigger: ACGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAAT...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGAGCCAGGTATTGCCTaGAAGACTTGGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQEPGIA*KTWASG
Trigger: CCCAGATGCCCAAGTCTTCCAGGCAATACCTGGCTC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTCAGAAAGTAAGGGGATaGATTGGGGCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPQKVRG*IGAGPE
Trigger: CTCAGGCCCAGCCCCAATCCATCCCCTTACTTTCTG...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAATTAAAAATCCAGCCTaGAAGGTGTGCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALIKNPA*KVCQGE
Trigger: CTCTCCCTGGCACACCTTCCAGGCTGGATTTTTAAT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGTCAGTCACTGTCAGTaGGCCCAAGTGCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGVSHCQ*AQVLTS
Trigger: TGAGGTCAGCACTTGGGCCCACTGACAGTGACTGAC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAGGAAGAGAAACTATaGCCACAGTGGGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQEEKL*PQWGVA
Trigger: TGCCACTCCCCACTGTGGCCATAGTTTCTCTTCCTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCCCCAGGCACCAGGCTaGAAACCACATCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQPQAPG*KPHLAP
Trigger: GGGTGCGAGATGTGGTTTCCAGCCTGGTGCCTGGGG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAGCAGGTGCAGAGTCTaGGAGGCGAGGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSSRCRV*EARLDQ
Trigger: CTGGTCCAGCCTCGCCTCCCAGACTCTGCACCTGCT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGCCCAGAAGGATCAGTaGGAACCGAGGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQAQKDQ*EPRFLL
Trigger: CAGAAGAAACCTCGGTTCCCACTGATCCTTCTGGGC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGAGCTCCGCACAACGTaGCCCAGAAGGATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGELRTT*PRRISG
Trigger: CCCACTGATCCTTCTGGGCCACGTTGTGCGGAGCTC...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACAGGAAGCACCTCCCTaGGGCTGCGCTGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSQEAPP*GCAEPQ
Trigger: TTGGGGCTCAGCGCAGCCCCAGGGAGGTGCTTCCTG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCAGAAACAGAGGTTGTaGCCCTTCCCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAQKQRL*PFPHSP
Trigger: AGGGGAATGGGGGAAGGGCCACAACCTCTGTTTCTG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTACACTTCTGAGGTGGTaGGGGTTGTCTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPATLLRW*GLSVKH
Trigger: ATGCTTGACAGACAACCCCCACCACCTCAGAAGTGT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCAGCTGTCTGGCAGCCTaGAAGGCCTGCGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVSCLAA*KACEAS
Trigger: GGAAGCTTCGCAGGCCTTCCAGGCTGCCAGACAGCT...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGCTGGCTGGGGTCTaGGCTGCCGGTTATAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGREEPRAVLLADMDDLEGLAGV*AAGYSH
Trigger: GTGGCTATAACCGGCAGCCCAGACCCCAGCCAGCCC...TTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCAGAGGTGCTACTCTTaGAGTAGTAGACGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAQRCYS*SSRRSV
Trigger: AACGCTGCGTCTACTACTTCAAGAGTAGCACCTCTG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGCAAAGGAGAAGCTCCTaGAACTCTGCCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAQRRSS*NSAHRG
Trigger: CCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTG...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCAAAGGAGAAGCTCCTaGAACTCTGCCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGQRRSS*NSAHRG
Trigger: CCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTG...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCAAAGGAGAAGCTCCTaGAACTCTGCCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGQRRSS*NSAHRG
Trigger: CCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGRTPWC*RRPSWA
Trigger: TGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTCCCAAGTTTGGGTCCTaGTCTGTTACTCGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAPKFGS*SVTRCA
Trigger: TGCACAGCGAGTAACAGATCAGGACCCAAACTTGGG...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGTGTGCCAGGGAGAGTaGCCTGCTGGAACTCCATGG +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSVCQGE*PAGTPW
Trigger: CCATGGAGTTCCAGCAGGTCACTCTCCCTGGCACAC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGCCTGGGCGACAGGGTaGGACTACATCTCAAAAACA +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRAWATG*DYISKT
Trigger: TGTTTTTGAGATGTAGTCTCACCCTGTCGCCCAGGC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGCCTGGGCGACAGGGTaGGACTACATCTCAAAAACA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGAWATG*DYISKT
Trigger: TGTTTTTGAGATGTAGTCTCACCCTGTCGCCCAGGC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGGCAGGAAAATCGCTTaGACTAGAGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAGRKIA*TREAEV
Trigger: CACCTCCGCCTCTCTAGTTCAAGCGATTTTCCTGCC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGGTGGGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSGGQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGTCCCTATCTATAAAATaGGGAAGCAGGACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDESLSIK*GSRTAP
Trigger: AGGGGCAGTCCTGCTTCCTCATTTTATAGATAGGGA...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAATCTTTATTAACTaGAGGCACGGGGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTQIFIN*RHGAHH
Trigger: GTGGTGAGCCCCGTGCCTTCAGTTAATAAAGATTTG...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTACTCACACACACTTCTaGGGTGGTGGGGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPTHTHF*GGGGCL
Trigger: CAGACAACCCCCACCACCTCAGAAGTGTGTGTGAGT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCAAATCTCCCTCCAGTaGGAATGGCTGGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGQISLQ*EWLEDG
Trigger: GCCATCTTCCAGCCATTCTCACTGGAGGGAGATTTG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGTTGAGTCTAGGAGTTTaGGACCAGCTGGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLALSLGV*DQLGHS
Trigger: ACTATGCCCCAGCTGGTCTCAAACTCCTAGACTCAA...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGCCCAGGACATGCGTaGAGCTGGAAACTGATCCCG +
Preference number: 4 (lower is better)
Translates to: CPRAGLSFRGSGQSPCAASPGHA*SWKLIP
Trigger: CGGGATCAGTTTCCAGCTTCACGCATGTCCTGGGCT...TGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR GCA 90 bp GATATGGATGATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCCATCAGGCTGTCTTCTaGCGGCCTCGGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DMDDLEGENVVGRGLLSRHQAVF*RPRPGS
Trigger: TGACCCAGGCCGAGGCCGGCAGAAGACAGCCTGATG...GCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGGCCATTTCAGCAGCTaGAGCTGGGTACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSGHFSS*SWVPPF
Trigger: GAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGGCC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: CGSAPPCCPHSQTGPRPPSAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...TGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp GTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAAAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VLHHAAHTHKQDLALQVESAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...TTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAACTTAGAAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HHAAHTHKQDLALQVELRRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...TCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGTCACTCAGTGACCTaGACCCTGGAAGACAAGACA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLASHSVT*TLEDKT
Trigger: TGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVAPSPD*PSLGPD
Trigger: ATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAGCCCGCTCAGTGTATaGAAGTTCTGGAACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQSPLSV*KFWNGD
Trigger: GTCCCCGTTCCAGAACTTGCATACACTGAGCGGGCT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGGAATGGGACCAGGCATaGAGGAGGTACCCAATAACT +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWEWDQA*RRYPIT
Trigger: AGTTATTGGGTACCTCCTGCATGCCTGGTCCCATTC...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGATGGCTCCTTCTTCATaGTGGAGGACCACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAMAPSS*WRTTAC
Trigger: GCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCAT...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGGCCCCAATAAGCCCTaGCTGCCTCAGGGAACTAAG +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLAGPNKP*LPQGTK
Trigger: CTTAGTTCCCTGAGGCAGGCAGGGCTTATTGGGGCC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGGGGTGTGTGCGAGGTaGCCAGCGAGGGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHGVCAR*PARGLM
Trigger: CATCAAGCCCCTCGCTGGGCACCTCGCACACACCCC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCATCTTCACAGGGTCACTaGCCCTCTTCCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQASSQGH*PSSPRT
Trigger: TGTCCTTGGGGAAGAGGGGCAGTGACCCTGTGAAGA...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAAATAAGCCAAGATTGTaGCATAACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALNKPRL*HNTPAW
Trigger: CCAGGCTGGAGTGTTATGGCACAATCTTGGCTTATT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCACAATCACAGCTCACTaGAGCCTTGACCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGTITAH*SLDLLG
Trigger: GCCCAGAAGGTCAAGGCTGCAGTGAGCTGTGATTGT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CGGGCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCAGCTCATTAGGCAGCTaGAGCCCAGGGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RAHLVSKGRSFFSWKWPISSLGS*SPGSEA
Trigger: AGCTTCAGACCCTGGGCTGCAGCTGCCTAATGAGCT...GATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGAAACGTTGTTGGACGTaGTCTCCTCAGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGKRCWT*SPQPPA
Trigger: TGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTT...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAGGGGAAAACGTTGTTaGACGTGGTCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSKGRSFFSWKWPISLRSRGKRC*TWSPQP
Trigger: CGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCT...GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTCCGAGCTGGAGTCGCTaGTGTCCAAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSPSWSR*CPRAGL
Trigger: AAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGG...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGTGTCTGTGTCCGAGCTaGAGTCGCTGGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLCLCPS*SRWCPR
Trigger: CCTTGGACACCAGCGACTCCAGCTCGGACACAGACA...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTCATGTCAGAGAAGGCTaGCTTCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSHVREG*LPGRGH
Trigger: GTGCCCACGCCCAGGAAGCCAGCCTTCTCTGACATG...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGTTGGAGGTAAAGGAGTaGGCCCGGGGCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGLEVKE*ARGMSE
Trigger: CTCTGACATGCCCCGGGCCCACTCCTTTACCTCCAA...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQLGLVG*HRWGLR
Trigger: TCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGGAACTTGGGCTTGTTaGCTGGCACAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSGTWAC*LAQVGA
Trigger: AGCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACTATCTTCAGGAACTTaGGCTTGTTGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQLSSGT*ACWLAQ
Trigger: CTGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACTATCTTCAGGAACTTaGGCTTGTTGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPLSSGT*ACWLAQ
Trigger: CTGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCTATCTTCAGGAACTTaGGCTTGTTGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALLSSGT*ACWLAQ
Trigger: CTGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAG...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCATGGCTGCCTCCCTTaGGGGGTCCTCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVHGCLP*GVLFSY
Trigger: ATAGCTGAAGAGGACCCCCCAAGGGAGGCAGCCATG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGACCGAGTTGGGCAGTaGCACCTTCTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQDRVGQ*HLLIVL
Trigger: GAGGACTATGAGAAGGTGCCACTGCCCAACTCGGTC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTCCAGGTAGGAGTCATCCTCATCGTCGTGCTCATAGTCTTCATTGTCCGTGGCTGGAGCCTGGCGCCTaGTTCAGCCCTAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: APGRSHPHRRAHSLHCPWLEPGA*FSPRTQ
Trigger: TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAG...CCACGGACAATGAAGACTATGAGCACGACGATGAGGATGACTCCTACCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQLVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPLVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TATCCACAGGCCGCTCAACTGCGCCGTAGAAGCTGTCTGTGTCCGAGCTGGAGTTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: YPQAAQLRRRSCLCPSWSLVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...ACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGGCACAGCTTGGTCCTaGGTTTCTGGGATTGGGACA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPGTAWS*VSGIGT
Trigger: TGTCCCAATCCCAGAAACCCAGGACCAAGCTGTGCC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDGNSPY*SLCLSV
Trigger: AACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTAAGACAACCAACTGTTaGGGTTCCCGGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPKTTNC*GSRVLL
Trigger: CAGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAGTGTATGCAAGTTCTaGAACGGGGACAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPSVCKF*NGDSHS
Trigger: TGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTATTGCCTGGAAGACTTaGGCATCTGGGTACCACCGT +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPIAWKT*ASGYHR
Trigger: ACGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAAT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCAGAAAGTAAGGGGATaGATTGGGGCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLQKVRG*IGAGPE
Trigger: CTCAGGCCCAGCCCCAATCCATCCCCTTACTTTCTG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCTGCAGAGGTGGCCTTaGACACCTGGTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLLQRWP*TPGSWK
Trigger: CTTCCAGGAACCAGGTGTCCAAGGCCACCTCTGCAG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGGGAGGAGGAATGGCTaGTTTTCCAGAGATAGATCA +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRGRRNG*FSRDRS
Trigger: TGATCTATCTCTGGAAAACCAGCCATTCCTCCTCCC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGAAAATTAGCCAGGCGTaGTGGCGGGCGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGKISQA*WRAPGI
Trigger: GATTCCAGGCGCCCGCCACCACGCCTGGCTAATTTT...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCCTATCACCTGGCTCTaGGCCCCAGGATGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGPITWL*APGCFS
Trigger: GCTAAAGCATCCTGGGGCCCAGAGCCAGGTGATAGG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACAGCTCACACAGACGTaGACAGCTGTGCTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQQLTQT*TAVLAG
Trigger: ACCTGCTAGCACAGCTGTCCACGTCTGTGTGAGCTG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCATGGGAACTCCTCATaGCTCCTTCTTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAHGNSS*LLLHAG
Trigger: TCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGACTAGAACACTTATaGCAAGTCTCGGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAGLEHL*QVSGGH
Trigger: ATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGGCACCTCACAGATGTaGTCAGTAAATGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSGTSQM*SVNGNP
Trigger: GGGATTACCATTTACTGACCACATCTGTGAGGTGCC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCACTCCCCAGTGCTGTaGCCCCCTTGGTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGHSPVL*PPWLSE
Trigger: TTCACTCAACCAAGGGGGCCACAGCACTGGGGAGTG...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTGTTTCACCCTGGGCTaGGGGTGCTTCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVCFTLG*GCFPKP
Trigger: TGGCTTTGGGAAGCACCCCCAGCCCAGGGTGAAACA...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAAGCATGTTTCACCCTaGGCTGGGGGTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQKHVSP*AGGASQ
Trigger: TTGGGAAGCACCCCCAGCCCAGGGTGAAACATGCTT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAAGCATGTTTCACCCTaGGCTGGGGGTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDKHVSP*AGGASQ
Trigger: TTGGGAAGCACCCCCAGCCCAGGGTGAAACATGCTT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCATCCCTCCAGCGCCTaGATCACCCTCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGHPSSA*ITLKSL
Trigger: GAGGCTTTTGAGGGTGATCCAGGCGCTGGAGGGATG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAACACTTCTGAGGTGGTaGGGGTTGTCTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQTLLRW*GLSVKH
Trigger: ATGCTTGACAGACAACCCCCACCACCTCAGAAGTGT...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGCATTCAAAGGCATCCTaGGCTGCATGCATTGGACAA +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEHSKAS*AACIGQ
Trigger: TTGTCCAATGCATGCAGCCCAGGATGCCTTTGAATG...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGCATGTCCAATCTTTTaGCTTCCATGGACCATACCG +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRACPIF*LPWTIP
Trigger: CGGTATGGTCCATGGAAGCCAAAAGATTGGACATGC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAATGTCTGCCAAGGATaGGAAGGCAAGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLNVCQG*EGKGIL
Trigger: CAGAATTCCCTTGCCTTCCCATCCTTGGCAGACATT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGATTAGCTGGGCTTGGTaGTGTGGGCCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLISWAW*CGPVVP
Trigger: TGGGACCACAGGCCCACACCACCAAGCCCAGCTAAT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATATGGATGATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCAAACTGATCCCGGCCTaGGAGGACCCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DMDDLEGENVVGRGLLSRKLIPA*EDPGAG
Trigger: CCCTGCTCCAGGGTCCTCCCAGGCCGGGATCAGTTT...GCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACCCAAGTTTGGGTCCTaGTCTGTTACTCGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAPKFGS*SVTRCA
Trigger: TGCACAGCGAGTAACAGATCAGGACCCAAACTTGGG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGAACCCAGGCCTCTGTaGGACTTGGTTCTCTCACCT +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGEPRPL*DLVLSP
Trigger: AGGTGAGAGAACCAAGTCTCACAGAGGCCTGGGTTC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAAATCTTTATTAACTaGAGGCACGGGGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQIFIN*RHGAHH
Trigger: GTGGTGAGCCCCGTGCCTTCAGTTAATAAAGATTTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGCCTGGCCAACATGGTaGAACCCCGGTTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGAWPTW*NPGSTK
Trigger: TTTAGTGGAACCGGGGTTTCACCATGTTGGCCAGGC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAAGCCTCTTCCCTGCTaGGCTTCAATCTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAKPLPC*ASICLS
Trigger: AGAAAGGCAGATTGAAGCTCAGCAGGGAAGAGGCTT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGAAGCCTCTTCCCTGCTaGGCTTCAATCTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQKPLPC*ASICLS
Trigger: AGAAAGGCAGATTGAAGCTCAGCAGGGAAGAGGCTT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCAAATCTCCCTCCAGTaGGAATGGCTGGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLQISLQ*EWLEDG
Trigger: GCCATCTTCCAGCCATTCTCACTGGAGGGAGATTTG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCCAGACTGGCAAAAGTaGAATGTCTGCCAAGGATGG +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAPDWQK*NVCQGW
Trigger: CCATCCTTGGCAGACATTTCACTTTTGCCAGTCTGG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATG +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAKNHVR*FLLIWM
Trigger: CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQHRPLN*AVEAVC
Trigger: ACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAGGTGATCGCTGGAGGTaGGGGAGCTGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: REEPRAVLLADMDDLEGEGDRWR*GSCGFS
Trigger: AGAGAAGCCGCAGCTCCCGCACCTCCAGCGATCACC...TTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLSAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPSAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGGCAGCCACATGGACTaGCATCACCTAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSGSHMD*HHLGPV
Trigger: CACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCC...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGGCAAAGCTCACTGCTaGTTTATTGGAGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQGKAHC*FIGGNS
Trigger: GCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAAGGCAAAGCTCACTaGTGCTTTATTGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQGKAH*CFIGGN
Trigger: GTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCCTTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGCTCCCAGCCCAGACTaGCCAAGTTTGGGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQAPSPD*PSLGPD
Trigger: ATCAGGACCCAAACTTGGGCAGTCTGGGCTGGGAGC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGAATGGGACCAGGCATaGAGGAGGTACCCAATAACT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQEWDQA*RRYPIT
Trigger: AGTTATTGGGTACCTCCTGCATGCCTGGTCCCATTC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGAATGGGACCAGGCATaGAGGAGGTACCCAATAACT +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPREWDQA*RRYPIT
Trigger: AGTTATTGGGTACCTCCTGCATGCCTGGTCCCATTC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAACAGAAGCTCCCTGTaGTCCAGCCTCGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSNRSSL*SSLGCG
Trigger: ACCACAGCCGAGGCTGGAGCACAGGGAGCTTCTGTT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGCAAAGAATTCTGACTaGAGGGAGGAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQAKNSD*REEEWL
Trigger: CAGCCATTCCTCCTCCCTGCAGTCAGAATTCTTTGC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTCTTCACAGGGTCACTaGCCCTCTTCCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: LTAALLEATAPTGACVLASSQGH*PSSPRT
Trigger: TGTCCTTGGGGAAGAGGGGCAGTGACCCTGTGAAGA...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGACAGGTAGGGGTCTaGTCTGTACCCATCAAATCT +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLARQVGV*SVPIKS
Trigger: AGATTTGATGGGTACAGAGCAGACCCCTACCTGTCT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGATGAAAAAGGGATTCTaGCTCAGCTCTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRMKKGF*LSSEPL
Trigger: GAGGGGCTCAGAGCTGAGGCAGAATCCCTTTTTCAT...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTATGAAAAAGGGATTCTaGCTCAGCTCTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPMKKGF*LSSEPL
Trigger: GAGGGGCTCAGAGCTGAGGCAGAATCCCTTTTTCAT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGCCAAAGAAGCCAGCTaGCAGAATTTGCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRAKEAS*QNLHLY
Trigger: ATACAGATGCAAATTCTGGCAGCTGGCTTCTTTGGC...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAGCCTGACTCAAGGCTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQSLTQG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAGCCTTGAGTCAGGCT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTACAATCACAGCTCACTaGAGCCTTGACCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPTITAH*SLDLLG
Trigger: GCCCAGAAGGTCAAGGCTGCAGTGAGCTGTGATTGT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCATTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAFFSWK*PISLRS
Trigger: GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAA...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDFFSWK*PISLRS
Trigger: GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAA...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQRSFFS*KWPISL
Trigger: CAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCT...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp CCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRAVLLADMDDLEGENVVPPRAQ*VPLGVL
Trigger: GAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGG...AACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCATGGCTGCCTCCCTTaGGGGGTCCTCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQHGCLP*GVLFSY
Trigger: ATAGCTGAAGAGGACCCCCCAAGGGAGGCAGCCATG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGACCGAGTTGGGCAGTaGCACCTTCTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLDRVGQ*HLLIVL
Trigger: GAGGACTATGAGAAGGTGCCACTGCCCAACTCGGTC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCTGGATGAGACTGGCTaGGTCCTACGAGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPLDETG*VLRDVH
Trigger: ATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTTCACTGCTGCTTTATTaGAGGCAACAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLASLLLY*RQQPLL
Trigger: CAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGA...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAAGACAACCAACTGTTaGGGTTCCCGGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDKTTNC*GSRVLL
Trigger: CAGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAGACTGCCCAAGTTTaGGTCCTGATCTGTTACTCG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGQTAQV*VLICYS
Trigger: CGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGAGCCAGGTATTGCCTaGAAGACTTGGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGEPGIA*KTWASG
Trigger: CCCAGATGCCCAAGTCTTCCAGGCAATACCTGGCTC...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGGGAGAGTGACCTGCTaGAACTCCATGGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLGRVTC*NSMAES
Trigger: ACTTTCTGCCATGGAGTTCCAGCAGGTCACTCTCCC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAAACCCCTGCAGAGGTaGCCTTGGACACCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSKPLQR*PWTPGS
Trigger: GGAACCAGGTGTCCAAGGCCACCTCTGCAGGGGTTT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAAAGCAAAGGTGTCCTaGACTGCACCACTCACTAGC +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLAKAKVS*TAPLTS
Trigger: GCTAGTGAGTGGTGCAGTCCAGGACACCTTTGCTTT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAAGCAGGCAGTCTAGGTaGAGGGAACAGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSSRQSR*REQGVQ
Trigger: CTGCACGCCCTGTTCCCTCCACCTAGACTGCCTGCT...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCGTGCATCAGAGACATaGACAAAACTGTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTRASET*TKLLLA
Trigger: TGCTAGCAACAGTTTTGTCCATGTCTCTGATGCACG...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTATTAGCTGGGCTTGGTaGTGTGGGCCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSISWAW*CGPVVP
Trigger: TGGGACCACAGGCCCACACCACCAAGCCCAGCTAAT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCCACTGTACCCAGCCTaGAAAGAATTTCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTPLYPA*KEFLKP
Trigger: TGGCTTAAGAAATTCTTTCCAGGCTGGGTACAGTGG...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGACAGGTGGAAGGACTTaGGTTTGTCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRTGGRT*VCHSFW
Trigger: CCAGAAACTGTGACAAACTCAAGTCCTTCCACCTGT...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTACAGGTGGAAGGACTTaGGTTTGTCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPTGGRT*VCHSFW
Trigger: CCAGAAACTGTGACAAACTCAAGTCCTTCCACCTGT...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAGTGGGCCCAAGTGCTaGCCTCAGTTTAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSSGPKC*PQFRFP
Trigger: GGGAAACCTAAACTGAGGTCAGCACTTGGGCCCACT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCCAGGGCAAAGAATTCTaGCTGCAGGGAGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVQGKEF*LQGGGM
Trigger: CATTCCTCCTCCCTGCAGTCAGAATTCTTTGCCCTG...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGCCCCCTTGGTTGAGTaGAAGCACCTCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHAPLVE*KHLQSP
Trigger: AGGGCTCTGGAGGTGCTTTCACTCAACCAAGGGGGC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCTCCCTATCTATAAAATaGGGAAGCAGGACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGSLSIK*GSRTAP
Trigger: AGGGGCAGTCCTGCTTCCTCATTTTATAGATAGGGA...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTCCCTATCTATAAAATaGGGAAGCAGGACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQSLSIK*GSRTAP
Trigger: AGGGGCAGTCCTGCTTCCTCATTTTATAGATAGGGA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAAATCTTTATTAACTaGAGGCACGGGGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGQIFIN*RHGAHH
Trigger: GTGGTGAGCCCCGTGCCTTCAGTTAATAAAGATTTG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAAGTGAAATGAATCTGTaGACTACGATACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALSEMNL*TTIQPN
Trigger: GTTTGGCTGTATCGTAGTTCACAGATTCATTTCACT...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAACCAGACTGGCAAAAGTaGAATGTCTGCCAAGGATGG +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQPDWQK*NVCQGW
Trigger: CCATCCTTGGCAGACATTTCACTTTTGCCAGTCTGG...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCCAGACTGGCAAAAGTaGAATGTCTGCCAAGGATGG +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLPDWQK*NVCQGW
Trigger: CCATCCTTGGCAGACATTTCACTTTTGCCAGTCTGG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGACTCAAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQDSRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTTGAGTC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGCTATGATTGGCCACTaGTCTCCAGTCTGGGCAACT +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGAMIGH*SPVWAT
Trigger: AGTTGCCCAGACTGGAGAGCAGTGGCCAATCATAGC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356331.9
ENST00000515737.5
CDS-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGIGTGQ*ISSAAM
Trigger: CATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTAT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATG +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAKNHVR*FLLIWM
Trigger: CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGCAAGGCAAAGCTCACTaGTGCTTTATTGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQQGKAH*CFIGGN
Trigger: GTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCCTTG...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAAGTCACTCAGTGACCTaGACCCTGGAAGACAAGACA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQASHSVT*TLEDKT
Trigger: TGTCTTGTCTTCCAGGGTGCAGGTCACTGAGTGACT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGAGGTACCCAATAACTaGTCGCTAATGCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPEVPNN*SLMQGM
Trigger: CATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTCCAGGGAGAGTGACCTaGTGGAACTCCATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSPGRVT*WNSMAE
Trigger: TTCTGCCATGGAGTTCCAGCAGGTCACTCTCCCTGG...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGCAAAGAATTCTGACTaGAGGGAGGAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPAKNSD*REEEWL
Trigger: CAGCCATTCCTCCTCCCTGCAGTCAGAATTCTTTGC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGGAAAATACTGCAATaGCTGCATAATTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTRKILQ*LHNWVL
Trigger: CAGCACCCAATTATGCAGGCATTGCAGTATTTTCCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGAATTCTGTTTTACTaGTGGTGGGCACGTAAACTA +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAGILFY*WWARKL
Trigger: TAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCACAATCACAGCTCACTaGAGCCTTGACCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVTITAH*SLDLLG
Trigger: GCCCAGAAGGTCAAGGCTGCAGTGAGCTGTGATTGT...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGCAGTAAGCTATGATTaGCCACTGCTCTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAAVSYD*PLLSSL
Trigger: CAGACTGGAGAGCAGTGGCCAATCATAGCTTACTGC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356331.9
ENST00000515737.5
CDS-3UTR CCA 90 bp GGAGGCCGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAATTCAGCAGCTGCAGCTaGGTACCGCCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GGREEPRAVLLADMDDLEFSSCS*VPPFLC
Trigger: GCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAA...TTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLARSFFS*KWPISL
Trigger: CAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LKGKTLLDVVSSAARITLRSFFS*KWPISL
Trigger: CAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCT...CAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCTATCTTCAGGAACTTaGGCTTGTTGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDLSSGT*ACWLAQ
Trigger: CTGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGCTCACCCTCCCATGTaGGCCCATGTCCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHAHPPM*AHVRLC
Trigger: ACACAGACGGACATGGGCCCACATGGGAGGGTGAGC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGGCAACAGCCCCTACTaGAGCCTGTGTCTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQGNSPY*SLCLSV
Trigger: AACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCTCACTGCTGCTTTATTaGAGGCAACAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: VSKGRSFFSWKWPISLRSSLLLY*RQQPLL
Trigger: CAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGA...GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCAGACTGCCCAAGTTTaGGTCCTGATCTGTTACTCG +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLQTAQV*VLICYS
Trigger: CGAGTAACAGATCAGGACCCAAACTTGGGCAGTCTG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAGTGTATGCAAGTTCTaGAACGGGGACAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQSVCKF*NGDSHS
Trigger: TGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGATTAAAAATCCAGCCTaGAAGGTGTGCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRIKNPA*KVCQGE
Trigger: CTCTCCCTGGCACACCTTCCAGGCTGGATTTTTAAT...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGTCAGTCACTGTCAGTaGGCCCAAGTGCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQVSHCQ*AQVLTS
Trigger: TGAGGTCAGCACTTGGGCCCACTGACAGTGACTGAC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGGGAGGAGGAATGGCTaGTTTTCCAGAGATAGATCA +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRGRRNG*FSRDRS
Trigger: TGATCTATCTCTGGAAAACCAGCCATTCCTCCTCCC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAAAAATTAGCCAGGCGTaGTGGCGGGCGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSKISQA*WRAPGI
Trigger: GATTCCAGGCGCCCGCCACCACGCCTGGCTAATTTT...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAAAAGCAAAGGTGTCCTaGACTGCACCACTCACTAGC +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAKAKVS*TAPLTS
Trigger: GCTAGTGAGTGGTGCAGTCCAGGACACCTTTGCTTT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACCTATCACCTGGCTCTaGGCCCCAGGATGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSPITWL*APGCFS
Trigger: GCTAAAGCATCCTGGGGCCCAGAGCCAGGTGATAGG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATCATGGGAACTCCTCATaGCTCCTTCTTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDHGNSS*LLLHAG
Trigger: TCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATG...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACATGGGAACTCCTCATaGCTCCTTCTTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAHGNSS*LLLHAG
Trigger: TCCAGCATGAAGAAGGAGCCATGAGGAGTTCCCATG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCCCTACCCTTATATGTaGACTAGAACACTTATGGCA +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLPYPYM*TRTLMA
Trigger: TGCCATAAGTGTTCTAGTCCACATATAAGGGTAGGG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGGAATCGATTGAACCCTaGAGATTTGCATTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWESIEP*RFALSR
Trigger: TCGGCTCAATGCAAATCTCCAGGGTTCAATCGATTC...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATACACTTCTGAGGTGGTaGGGGTTGTCTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDTLLRW*GLSVKH
Trigger: ATGCTTGACAGACAACCCCCACCACCTCAGAAGTGT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCACACACTTCTGAGGTaGTGGGGGTTGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLHTLLR*WGLSVK
Trigger: CTTGACAGACAACCCCCACCACCTCAGAAGTGTGTG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGAGAATGGCTGGAAGATaGCTTAAAAGGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLARMAGR*LKRVHH
Trigger: GTGGTGAACCCTTTTAAGCCATCTTCCAGCCATTCT...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCAGGGCACTTGGGTGCTaGCAAAACTATTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGRALGC*QNYFLM
Trigger: CATCAGGAAATAGTTTTGCCAGCACCCAAGTGCCCT...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGCATGTCCAATCTTTTaGCTTCCATGGACCATACCG +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRACPIF*LPWTIP
Trigger: CGGTATGGTCCATGGAAGCCAAAAGATTGGACATGC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAATGTCTGCCAAGGATaGGAAGGCAAGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: AGSYEMSITEALGKHSLANVCQG*EGKGIL
Trigger: CAGAATTCCCTTGCCTTCCCATCCTTGGCAGACATT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAAAATTAGCTGGGCTTaGTGGTGTGGGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGKISWA*WCGPVV
Trigger: GACCACAGGCCCACACCACCAAGCCCAGCTAATTTT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCACTGTACCCAGCCTaGAAAGAATTTCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAPLYPA*KEFLKP
Trigger: TGGCTTAAGAAATTCTTTCCAGGCTGGGTACAGTGG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CAA 72 bp TTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTG +
Preference number: 4 (lower is better)
Translates to: LLIWMILKGKTL*DVVSSAARITL
Trigger: CAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR CAA 72 bp TTGAACAACCTTTCCACTTCGCAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGCAGTGGCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LNNLSTSQDSVV*TKTELGSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTGCGAAGTGGAAAGGTTGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR TCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTACAGGTGGAAGGACTTaGGTTTGTCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPTGGRT*VCHSFW
Trigger: CCAGAAACTGTGACAAACTCAAGTCCTTCCACCTGT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAACAGGTGGAAGGACTTaGGTTTGTCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQATGGRT*VCHSFW
Trigger: CCAGAAACTGTGACAAACTCAAGTCCTTCCACCTGT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR TCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGAAGCCTCTTCCCTGCTaGGCTTCAATCTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLKPLPC*ASICLS
Trigger: AGAAAGGCAGATTGAAGCTCAGCAGGGAAGAGGCTT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCAAATCTCCCTCCAGTaGGAATGGCTGGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQQISLQ*EWLEDG
Trigger: GCCATCTTCCAGCCATTCTCACTGGAGGGAGATTTG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGAATTTGCATCTGTATaGTTCAAGGGGATAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSEFASV*FKGIKH
Trigger: GTGCTTTATCCCCTTGAATCATACAGATGCAAATTC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGTGAAATGAATCTGTaGACTACGATACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTSEMNL*TTIQPN
Trigger: GTTTGGCTGTATCGTAGTTCACAGATTCATTTCACT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATG +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAKNHVR*FLLIWM
Trigger: CATCCATATCAGCAAGAAGCACCGCACGTGGTTCTT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTACATCTGGGAGGCCGTaGTTAGGGGGCGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASTSGRP*LGGGGG
Trigger: GCCACCCCCGCCCCCTAAGCACGGCCTCCCAGATGT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAGTGCTCCACCATGCTaGCCACACTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSSAPPC*PHSQTG
Trigger: TCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGGAGCCCCCAGTCCCTaGACACCCAGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRGAPSP*TPSCPG
Trigger: TCCAGGGCAGCTGGGTGTGCAGGGACTGGGGGCTCC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGCAAAGAATTCTGACTaGAGGGAGGAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLAKNSD*REEEWL
Trigger: CAGCCATTCCTCCTCCCTGCAGTCAGAATTCTTTGC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGCCAAAGAAGCCAGCTaGCAGAATTTGCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRAKEAS*QNLHLY
Trigger: ATACAGATGCAAATTCTGGCAGCTGGCTTCTTTGGC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAATAAGCCAAGATTGTaGCATAACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGNKPRL*HNTPAW
Trigger: CCAGGCTGGAGTGTTATGGCACAATCTTGGCTTATT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACCTCTGCCCCCAAAGTaGTGGCATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSPLPPK*WHYRCE
Trigger: CTCACACCTGTAATGCCAGCACTTTGGGGGCAGAGG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCATGGTTAGCAGGTTCTaGGCACCAATGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLMVSRF*APMAFI
Trigger: TATGAAGGCCATTGGTGCCCAGAACCTGCTAACCAT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp TGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCACTATCTTCAGGAACTTaGGCTTGTTGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: CPRAGLSFRGSGQSPCAALSSGT*ACWLAQ
Trigger: CTGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAG...TGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CCA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGTCACTGCTGCTTTATTaGAGGCAACAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGSLLLY*RQQPLL
Trigger: CAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGA...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTCACTGCTGCTTTATTaGAGGCAACAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVSLLLY*RQQPLL
Trigger: CAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGA...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGATTGCCTGGAAGACTTaGGCATCTGGGTACCACCGT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQIAWKT*ASGYHR
Trigger: ACGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAAT...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGAGCCAGGTATTGCCTaGAAGACTTGGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSEPGIA*KTWASG
Trigger: CCCAGATGCCCAAGTCTTCCAGGCAATACCTGGCTC...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATATTAAAAATCCAGCCTaGAAGGTGTGCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDIKNPA*KVCQGE
Trigger: CTCTCCCTGGCACACCTTCCAGGCTGGATTTTTAAT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGGACTAGAACACTTATaGCAAGTCTCGGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQGLEHL*QVSGGH
Trigger: ATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGGCACCTCACAGATGTaGTCAGTAAATGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLGTSQM*SVNGNP
Trigger: GGGATTACCATTTACTGACCACATCTGTGAGGTGCC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCCACAATCCTTCGGATaGAACCACAGGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLPQSFG*NHRKRR
Trigger: TCTTCTCTTCCTGTGGTTCCATCCGAAGGATTGTGG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCCACAATCCTTCGGATaGAACCACAGGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPPQSFG*NHRKRR
Trigger: TCTTCTCTTCCTGTGGTTCCATCCGAAGGATTGTGG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAGGGCACTTGGGTGCTaGCAAAACTATTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDRALGC*QNYFLM
Trigger: CATCAGGAAATAGTTTTGCCAGCACCCAAGTGCCCT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGAGTTTGAGACCAGCTaGGGCATAGTAAGATCCTAT +
Preference number: 4 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPEFETS*GIVRSY
Trigger: ATAGGATCTTACTATGCCCCAGCTGGTCTCAAACTC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGAGTTTGAGACCAGCTaGGGCATAGTAAGATCCTAT +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGEFETS*GIVRSY
Trigger: ATAGGATCTTACTATGCCCCAGCTGGTCTCAAACTC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCCACTGTACCCAGCCTaGAAAGAATTTCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CWMRLAGSYEMSITEALGPLYPA*KEFLKP
Trigger: TGGCTTAAGAAATTCTTTCCAGGCTGGGTACAGTGG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCAGGTGGCATTGCAGATaGGCGCAGAAAGTTAGATTA +
Preference number: 4 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGRWHCR*AQKVRL
Trigger: TAATCTAACTTTCTGCGCCCATCTGCAATGCCACCT...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCTACATATGTCATATGTaGACATATGACAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRYICHM*TYDRGG
Trigger: GCCACCTCTGTCATATGTCCACATATGACATATGTA...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
3UTR CAA 72 bp TTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACC +
Preference number: 4 (lower is better)
Translates to: FLLIWMILKGKT*LDVVSSAARIT
Trigger: GGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
3UTR CAA 72 bp TCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTGAAGGGGAAAACGTTG +
Preference number: 4 (lower is better)
Translates to: SEEAEKNHVRCF*LIWMILKGKTL
Trigger: CAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR TCA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCAGTTTAGGTTTCCCTaGCATAAGGTGCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAQFRFP*HKVLRK
Trigger: TTTTCTTAGCACCTTATGTCAGGGAAACCTAAACTG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAGTTTAGGTTTCCCTaGCATAAGGTGCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQFRFP*HKVLRK
Trigger: TTTTCTTAGCACCTTATGTCAGGGAAACCTAAACTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACCAGTGGGGAGTGGCATaGCTCCCTAAGCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHQWGVA*LPKQVQ
Trigger: CTGAACTTGCTTAGGGAGTCATGCCACTCCCCACTG...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGTTATTCTGCAGGAAATaGATGAAAAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: VLWSLAPGSALEPNLLDELFCRK*MKKGFC
Trigger: GCAGAATCCCTTTTTCATTCATTTCCTGCAGAATAA...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGTTGAGTCTAGGAGTTTaGGACCAGCTGGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQLSLGV*DQLGHS
Trigger: ACTATGCCCCAGCTGGTCTCAAACTCCTAGACTCAA...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGACAGGTAGGGGTCTaGTCTGTACCCATCAAATCT +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGRQVGV*SVPIKS
Trigger: AGATTTGATGGGTACAGAGCAGACCCCTACCTGTCT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGATGGTTAGCAGGTTCTaGGCACCAATGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLMVSRF*APMAFI
Trigger: TATGAAGGCCATTGGTGCCCAGAACCTGCTAACCAT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVRSFFS*KWPISL
Trigger: CAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCT...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLRSFFS*KWPISL
Trigger: CAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASPPRAQ*VPLGVL
Trigger: GAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGCCGCCTCGGGCACAGTaGGTCCCTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRPPRAQ*VPLGVL
Trigger: GAGGACTCCAAGAGGGACCCACTGTGCCCGAGGCGG...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACAGGAAGAGAAACTATaGCCACAGTGGGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSQEEKL*PQWGVA
Trigger: TGCCACTCCCCACTGTGGCCATAGTTTCTCTTCCTG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAGTCTCGGGAGGTCATaGGAACTCCTCATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHSLGRS*ELLMAP
Trigger: AGGAGCCATGAGGAGTTCCCATGACCTCCCGAGACT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCCCTACCCTTATATGTaGACTAGAACACTTATGGCA +
Preference number: 4 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAPYPYM*TRTLMA
Trigger: TGCCATAAGTGTTCTAGTCCACATATAAGGGTAGGG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGGCACCTCACAGATGTaGTCAGTAAATGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVGTSQM*SVNGNP
Trigger: GGGATTACCATTTACTGACCACATCTGTGAGGTGCC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGAATCGATTGAACCCTaGAGATTTGCATTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQESIEP*RFALSR
Trigger: TCGGCTCAATGCAAATCTCCAGGGTTCAATCGATTC...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACACACACTTCTGAGGTaGTGGGGGTTGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSHTLLR*WGLSVK
Trigger: CTTGACAGACAACCCCCACCACCTCAGAAGTGTGTG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAGAATGGCTGGAAGATaGCTTAAAAGGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDRMAGR*LKRVHH
Trigger: GTGGTGAACCCTTTTAAGCCATCTTCCAGCCATTCT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGAATGGCTGGAAGATaGCTTAAAAGGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPRMAGR*LKRVHH
Trigger: GTGGTGAACCCTTTTAAGCCATCTTCCAGCCATTCT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCATTCAAAGGCATCCTaGGCTGCATGCATTGGACAA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGHSKAS*AACIGQ
Trigger: TTGTCCAATGCATGCAGCCCAGGATGCCTTTGAATG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGCATGTCCAATCTTTTaGCTTCCATGGACCATACCG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVACPIF*LPWTIP
Trigger: CGGTATGGTCCATGGAAGCCAAAAGATTGGACATGC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCGTGCATCAGAGACATaGACAAAACTGTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLRASET*TKLLLA
Trigger: TGCTAGCAACAGTTTTGTCCATGTCTCTGATGCACG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAAAATTATCTGGACATaGAAGTGCGTGACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLKIIWT*KCVTVV
Trigger: AACTACAGTCACGCACTTCCATGTCCAGATAATTTT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCAAAATTATCTGGACATaGAAGTGCGTGACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSKIIWT*KCVTVV
Trigger: AACTACAGTCACGCACTTCCATGTCCAGATAATTTT...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTAAAATTATCTGGACATaGAAGTGCGTGACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAKIIWT*KCVTVV
Trigger: AACTACAGTCACGCACTTCCATGTCCAGATAATTTT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAGAGTTTGAGACCAGCTaGGGCATAGTAAGATCCTAT +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAEFETS*GIVRSY
Trigger: ATAGGATCTTACTATGCCCCAGCTGGTCTCAAACTC...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAAGGTGGCATTGCAGATaGGCGCAGAAAGTTAGATTA +
Preference number: 4 (lower is better)
Translates to: DETGWVLRDVHHRGPRQARWHCR*AQKVRL
Trigger: TAATCTAACTTTCTGCGCCCATCTGCAATGCCACCT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATACATATGTCATATGTaGACATATGACAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPYICHM*TYDRGG
Trigger: GCCACCTCTGTCATATGTCCACATATGACATATGTA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACCAGGGCAAAGAATTCTaGCTGCAGGGAGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHQGKEF*LQGGGM
Trigger: CATTCCTCCTCCCTGCAGTCAGAATTCTTTGCCCTG...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTCTGCAGGAAATGAATaGAAAAGGGATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLSAGNE*KRDSAS
Trigger: TGAGGCAGAATCCCTTTTTCATTCATTTCCTGCAGA...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAGTGAAATGAATCTGTaGACTACGATACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQSEMNL*TTIQPN
Trigger: GTTTGGCTGTATCGTAGTTCACAGATTCATTTCACT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAAGAGACTATCTTCATaGCCTTGGAGTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPKRLSS*PWSGNN
Trigger: ATTATTTCCACTCCAAGGTCATGAAGATAGTCTCTT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CGAGAAGAACCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAGGTAGTGCTCCACCATaGTGCCCACACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: REEPRAVLLADMDDLEGEGSAPP*CPHSQT
Trigger: TGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACC...TTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCCCTGCACACCCAGCTaGCCTGGACACTGTGCCGTA +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASPCTPS*PGHCAV
Trigger: TACGGCACAGTGTCCAGGGCAGCTGGGTGTGCAGGG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAGGAAAATACTGCAATaGCTGCATAATTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDRKILQ*LHNWVL
Trigger: CAGCACCCAATTATGCAGGCATTGCAGTATTTTCCT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGGAATTCTGTTTTACTaGTGGTGGGCACGTAAACTA +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDGILFY*WWARKL
Trigger: TAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGAATAAGCCAAGATTGTaGCATAACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLNKPRL*HNTPAW
Trigger: CCAGGCTGGAGTGTTATGGCACAATCTTGGCTTATT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACTTGGTCCTGGGTTTCTaGGATTGGGACAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHLVLGF*DWDRAS
Trigger: ACTTGCCCTGTCCCAATCCCAGAAACCCAGGACCAA...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGAATCGATTGAACCCTaGAGATTTGCATTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVESIEP*RFALSR
Trigger: TCGGCTCAATGCAAATCTCCAGGGTTCAATCGATTC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGCCCAGAAGGATCAGTaGGAACCGAGGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHAQKDQ*EPRFLL
Trigger: CAGAAGAAACCTCGGTTCCCACTGATCCTTCTGGGC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCGATACAGCCAAACAATaGAAGTTTTTAGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTDTAKQ*KFLAMN
Trigger: GTTCATTGCTAAAAACTTCCATTGTTTGGCTGTATC...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGAATGTCTGCCAAGGATaGGAAGGCAAGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQNVCQG*EGKGIL
Trigger: CAGAATTCCCTTGCCTTCCCATCCTTGGCAGACATT...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGGTGGCATTGCAGATaGGCGCAGAAAGTTAGATTA +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGRWHCR*AQKVRL
Trigger: TAATCTAACTTTCTGCGCCCATCTGCAATGCCACCT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTCAGTTTAGGTTTCCCTaGCATAAGGTGCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPQFRFP*HKVLRK
Trigger: TTTTCTTAGCACCTTATGTCAGGGAAACCTAAACTG...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTCTGCAGGAAATGAATaGAAAAGGGATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVSAGNE*KRDSAS
Trigger: TGAGGCAGAATCCCTTTTTCATTCATTTCCTGCAGA...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGAAGAGACTATCTTCATaGCCTTGGAGTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQKRLSS*PWSGNN
Trigger: ATTATTTCCACTCCAAGGTCATGAAGATAGTCTCTT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGGCCATTTCAGCAGCTaGAGCTGGGTACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASGHFSS*SWVPPF
Trigger: GAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGGCC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASSGQSP*AARPSS
Trigger: GCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGGCAAAGCTCACTGCTaGTTTATTGGAGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHGKAHC*FIGGNS
Trigger: GCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGCC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGGGGTTCCCGGGTACTaGTGCGGTCACCACTTAGAC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASGVPGY*CGHHLD
Trigger: GTCTAAGTGGTGACCGCAGCAGTACCCGGGAACCCC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGGGGTTCCCGGGTACTaGTGCGGTCACCACTTAGAC +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRGVPGY*CGHHLD
Trigger: GTCTAAGTGGTGACCGCAGCAGTACCCGGGAACCCC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCGGAGATCACGGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASRRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAAGACAGGTAGGGGTCTaGTCTGTACCCATCAAATCT +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSRQVGV*SVPIKS
Trigger: AGATTTGATGGGTACAGAGCAGACCCCTACCTGTCT...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCAGGAAAATACTGCAATaGCTGCATAATTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVRKILQ*LHNWVL
Trigger: CAGCACCCAATTATGCAGGCATTGCAGTATTTTCCT...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGCCAAAGAAGCCAGCTaGCAGAATTTGCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQAKEAS*QNLHLY
Trigger: ATACAGATGCAAATTCTGGCAGCTGGCTTCTTTGGC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTACAGTGGGTCCCTCTTaGAGTCCTCAGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASTVGPS*SPQQPG
Trigger: GCCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGCTTGGGCTTGTTGGCTaGCACAGGTGGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRLGLVG*HRWGLR
Trigger: TCTGAGCCCCCACCTGTGCCAGCCAACAAGCCCAAG...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCCCTACCCTTATATGTaGACTAGAACACTTATGGCA +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLPYPYM*TRTLMA
Trigger: TGCCATAAGTGTTCTAGTCCACATATAAGGGTAGGG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGAGCTCCGCACAACGTaGCCCAGAAGGATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASELRTT*PRRISG
Trigger: CCCACTGATCCTTCTGGGCCACGTTGTGCGGAGCTC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAGCAGGCAGTCTAGGTaGAGGGAACAGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASSRQSR*REQGVQ
Trigger: CTGCACGCCCTGTTCCCTCCACCTAGACTGCCTGCT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGAGCTGTCTGGCAGCCTaGAAGGCCTGCGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRSCLAA*KACEAS
Trigger: GGAAGCTTCGCAGGCCTTCCAGGCTGCCAGACAGCT...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGTTTACAAATTTGTGTTaGGCCACATTCAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRFTNLC*ATFKGI
Trigger: GATGCCTTTGAATGTGGCCCAACACAAATTTGTAAA...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTCGTGCATCAGAGACATaGACAAAACTGTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSRASET*TKLLLA
Trigger: TGCTAGCAACAGTTTTGTCCATGTCTCTGATGCACG...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGATTAAAAATAAGAACTaGCATGCACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQIKNKN*HAQWLM
Trigger: CATGAGCCACTGTGCATGCCAGTTCTTATTTTTAAT...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGCCCAAGCCCCAGAACTaGGCCCACCTGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRPKPQN*AHLNSS
Trigger: AGATGAGTTCAGGTGGGCTCAGTTCTGGGGCTTGGG...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGAATTTGCATCTGTATaGTTCAAGGGGATAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLEFASV*FKGIKH
Trigger: GTGCTTTATCCCCTTGAATCATACAGATGCAAATTC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAAGAGACTATCTTCATaGCCTTGGAGTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: GSALEPNLLDETGWVLRDKRLSS*PWSGNN
Trigger: ATTATTTCCACTCCAAGGTCATGAAGATAGTCTCTT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGAGGTACCCAATAACTaGTCGCTAATGCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHEVPNN*SLMQGM
Trigger: CATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGGAATTCTGTTTTACTaGTGGTGGGCACGTAAACTA +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQGILFY*WWARKL
Trigger: TAGTTTACGTGCCCACCAGCAGTAAAACAGAATTCC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCATTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLIWMILKGKTLLDVVSSFFSWK*PISLRS
Trigger: GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAA...TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHRSFFS*KWPISL
Trigger: CAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCAGTGTTCCTGTCCTTaGAGCCCAGGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASQCSCP*SPGTAW
Trigger: CCAAGCTGTGCCTGGGCTCCAAGGACAGGAACACTG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGGACTAGAACACTTATaGCAAGTCTCGGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHGLEHL*QVSGGH
Trigger: ATGACCTCCCGAGACTTGCCATAAGTGTTCTAGTCC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGTGTTTCACCCTGGGCTaGGGGTGCTTCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRCFTLG*GCFPKP
Trigger: TGGCTTTGGGAAGCACCCCCAGCCCAGGGTGAAACA...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTTTATTCTGCAGGAAATaGATGAAAAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGLFCRK*MKKGFC
Trigger: GCAGAATCCCTTTTTCATTCATTTCCTGCAGAATAA...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTGAATTTGCATCTGTATaGTTCAAGGGGATAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSEFASV*FKGIKH
Trigger: GTGCTTTATCCCCTTGAATCATACAGATGCAAATTC...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGACTCAAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASDSRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTTGAGTC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTAGCCCGCTCAGTGTATaGAAGTTCTGGAACGGGGAC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASSPLSV*KFWNGD
Trigger: GTCCCCGTTCCAGAACTTGCATACACTGAGCGGGCT...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGACCGAGTTGGGCAGTaGCACCTTCTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASDRVGQ*HLLIVL
Trigger: GAGGACTATGAGAAGGTGCCACTGCCCAACTCGGTC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGCCTCAACTGTCCAGTTaGCCAGAGGGACCTATCACC +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRPQLSS*PEGPIT
Trigger: GGTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGG...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGTTTACAAATTTGTGTTaGGCCACATTCAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: AALLEATAPTGACVLAFLFTNLC*ATFKGI
Trigger: GATGCCTTTGAATGTGGCCCAACACAAATTTGTAAA...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGTACATATGTCATATGTaGACATATGACAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQYICHM*TYDRGG
Trigger: GCCACCTCTGTCATATGTCCACATATGACATATGTA...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGTTATTCTGCAGGAAATaGATGAAAAAGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQLFCRK*MKKGFC
Trigger: GCAGAATCCCTTTTTCATTCATTTCCTGCAGAATAA...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp GTAGAACTTAGAGTCCTTCTCAAAAATGCGATAGTTCCTCACTTTGTTAGAGGTAGGCAAGCACAGCCTTaGTCCTGCTCACCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VELRVLLKNAIVPHFVRGRQAQP*SCSPSH
Trigger: ATGGGAGGGTGAGCAGGAGCAAGGCTGTGCTTGCCT...ACCTCTAACAAAGTGAGGAACTATCGCATTTTTGAGAAGGACTCTAAGTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452765.7
ENST00000515737.5
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASFFSWK*PISLRS
Trigger: GCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAA...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGATACAGCCAAACAATaGAAGTTTTTAGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: AKLTAALLEATAPTGACVDTAKQ*KFLAMN
Trigger: GTTCATTGCTAAAAACTTCCATTGTTTGGCTGTATC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTATTAAAAATAAGAACTaGCATGCACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: LQANDVKHPARHLTDVVSIKNKN*HAQWLM
Trigger: CATGAGCCACTGTGCATGCCAGTTCTTATTTTTAAT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGGATACAGCCAAACAATaGAAGTTTTTAGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQDTAKQ*KFLAMN
Trigger: GTTCATTGCTAAAAACTTCCATTGTTTGGCTGTATC...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCATTTACAAATTTGTGTTaGGCCACATTCAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSFTNLC*ATFKGI
Trigger: GATGCCTTTGAATGTGGCCCAACACAAATTTGTAAA...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR GCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGAGGTACCCAATAACTaGTCGCTAATGCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSREVPNN*SLMQGM
Trigger: CATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCCACAATCCTTCGGATaGAACCACAGGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASPQSFG*NHRKRR
Trigger: TCTTCTCTTCCTGTGGTTCCATCCGAAGGATTGTGG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCATTCAAAGGCATCCTaGGCTGCATGCATTGGACAA +
Preference number: 4 (lower is better)
Translates to: NLTDIITSQRSQLPEFASHSKAS*AACIGQ
Trigger: TTGTCCAATGCATGCAGCCCAGGATGCCTTTGAATG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CCA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACATTAAAAATAAGAACTaGCATGCACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHIKNKN*HAQWLM
Trigger: CATGAGCCACTGTGCATGCCAGTTCTTATTTTTAAT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR TCA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGTCTGCAGGAAATGAATaGAAAAGGGATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRSAGNE*KRDSAS
Trigger: TGAGGCAGAATCCCTTTTTCATTCATTTCCTGCAGA...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS GCA 90 bp GCCAGTCTCAGTCTACCCGCTGCCTATGCCTCATCAGGGAGATTCTaGCCTGCCCCTTGCCAGGCCATGCGGCCAGGGTCCCCGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ASLSLPAAYASSGRF*PAPCQAMRPGSPSH
Trigger: GTGGGACGGGGACCCTGGCCGCATGGCCTGGCAAGGGGCAGGGCAGAATCTCCCTGATGAGGCATAGGCAGCGGGTAGACTGAGACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CCA 90 bp AGAGGCCAGGGCTCTCTGGCTCCAGCGCAAGGTCAGCTGCATCCCTaGGAGGAAGCTCCCTGCTGCCTCCCCGCAGGGCCACCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: RGQGSLAPAQGQLHP*EEAPCCLPAGPPLN
Trigger: ATTCAGAGGTGGCCCTGCGGGGAGGCAGCAGGGAGCTTCCTCCCAGGGATGCAGCTGACCTTGCGCTGGAGCCAGAGAGCCCTGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513095.5
CDS-3UTR CAA 90 bp TCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCTAGGGGACCGGGGCCCTaGGAGGTAAAGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SSSCAPPRRRPRRTTCGARGPGP*EVKEWA
Trigger: GGCCCACTCCTTTACCTCCAAGGGCCCCGGTCCCCT...AGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS TCA 90 bp CACAACCAGGACCTACAGGACGGAAGCGGGAGGCTGACGGCTCCCTaGGAAACAGCGGGACCAGCCTCGGGAGACCATGGGCTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: HNQDLQDGSGRLTAP*ETAGPASGDHGLPR
Trigger: TCGGGGAAGCCCATGGTCTCCCGAGGCTGGTCCCGCTGTTTCTCAGGGAGCCGTCAGCCTCCCGCTTCCGTCCTGTAGGTCCTGGTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452765.7
CDS GCA 90 bp GCTCAACTGCGCCGTAGAAGCTGTCTGTGTCCGAGCTGGAGTCGCTaGAATGCAGGGTGCGTTGGGGCGGACGGTGAGCACCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AQLRRRSCLCPSWSR*NAGCVGADGEHQAW
Trigger: CCAGGCCTGGTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 90 bp ACACCCCCAGTCACCTTGCACTCGTCCTCGGACCCCCAGTCACCTTaGGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: TPPVTLHSSSDPQSP*APPRRRPRRTTCGA
Trigger: AGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGGTGACTGGGGGTCCGAGGACGAGTGCAAGGTGACTGGGGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000506932.1
ENST00000509677.5
ENST00000510074.5
ENST00000511185.5
ENST00000511237.5
ENST00000511663.5
ENST00000512131.5
CDS GCA 90 bp CTGTCCTCTCGCTGTTGTAGGTCTCAGGAGCTGAGCACGTCGGGCTaGCGTGAGGCTGACAGAAGCAGCCCAGCAGAGCCCTGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSSRCCRSQELSTSG*READRSSPAEPWPA
Trigger: GGCTGGCCAGGGCTCTGCTGGGCTGCTTCTGTCAGCCTCACGGCAGCCCGACGTGCTCAGCTCCTGAGACCTACAACAGCGAGAGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CCA 90 bp CCACAGGCCGCTCAACTGCGCCGTAGAAGCTGTCTGTGTCCGAGCTaGAGTCGCTGCAATGCAGGGTGCGTTGGGGCGGACGGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: PQAAQLRRRSCLCPS*SRCNAGCVGADGEH
Trigger: GTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGCGGAGATCACGGCATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWREAEITA*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCGC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS GCA 90 bp TCTCAGTCTACCCGCTGCCTATGCCTCATCAGGGAGATTCTGCCCTaGCCCTTGCCAGGCCATGCGGCCAGGGTCCCCGTCCCACTCAGA +
Preference number: 5 (lower is better)
Translates to: SQSTRCLCLIREILP*PLPGHAARVPVPLR
Trigger: TCTGAGTGGGACGGGGACCCTGGCCGCATGGCCTGGCAAGGGGCAGGGCAGAATCTCCCTGATGAGGCATAGGCAGCGGGTAGACTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 90 bp AAGGCCATCCAGCTCTTGCACTCGTCCTCGGACCCCCAGTCACCTTaGGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: KAIQLLHSSSDPQSP*APPRRRPRRTTCGA
Trigger: AGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGGTGACTGGGGGTCCGAGGACGAGTGCAAGAGCTGGATGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515183.5
CDS CCA 90 bp GCAGCTGCAGCTGGGTACCGCCCTTCTTGTGCAGGTAGCCAGCCTTaGCCACGCCCCCAGGCATGGTTAGCAGGTTCTGGGCACCAATGG +
Preference number: 5 (lower is better)
Translates to: AAAAGYRPSCAGSQP*PRPQAWLAGSGHQW
Trigger: CCATTGGTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGGCCAAGGCTGGCTACCTGCACAAGAAGGGCGGTACCCAGCTGCAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000502260.5
ENST00000503219.5
ENST00000503393.8
ENST00000504294.5
ENST00000508385.5
ENST00000509677.5
ENST00000510074.5
ENST00000511185.5
ENST00000511237.5
ENST00000511663.5
ENST00000511747.6
ENST00000512014.5
ENST00000512131.5
ENST00000513020.5
ENST00000513095.5
ENST00000515737.5
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAAAGGCCATCCAGCTCTaGCGCTCCTCCTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWREKAIQL*RSSSEE
Trigger: CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTT...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp AGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACACACAGTGGGTCCCTCTaGGAGTCCTCAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RPSRAAHGPSLDRAQPRTHSGSL*ESSAAR
Trigger: CCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTG...TGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGAGGAACTTGGGCTTGTaGGCTGGCACAGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQRNLGL*AGTGGG
Trigger: GCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCCT...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGCGGAGATCACGGCATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSAEITA*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCGC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS TCA 90 bp GTTTCGTCCCACACAACCAGGACCTACAGGACGGAAGCGGGAGGCTaGCGGCTCCCTGAGAAACAGCGGGACCAGCCTCGGGAGACCATG +
Preference number: 5 (lower is better)
Translates to: VSSHTTRTYRTEAGG*RLPEKQRDQPRETM
Trigger: CATGGTCTCCCGAGGCTGGTCCCGCTGTTTCTCAGGGAGCCGTCAGCCTCCCGCTTCCGTCCTGTAGGTCCTGGTTGTGTGGGACGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452765.7
CDS TCA 90 bp TCCGAGCTGGAGTCGCTGCAATGCAGGGTGCGTTGGGGCGGACGGTaGGCACCAGGCCTGGGAGGTCCCTTGATGCTCACACAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: SELESLQCRVRWGGR*APGLGGPLMLTQRY
Trigger: GTACCTTTGTGTGAGCATCAAGGGACCTCCCAGGCCTGGTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 90 bp AAGGGGAGGGCGGTATCCTGGAGGTGCCAGTCTCAGTCTACCCGCTaGCTATGCCTCATCAGGGAGATTCTGCCCTGCCCCTTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KGRAVSWRCQSQSTR*LCLIREILPCPLPG
Trigger: GCCTGGCAAGGGGCAGGGCAGAATCTCCCTGATGAGGCATAGGCAGCGGGTAGACTGAGACTGGCACCTCCAGGATACCGCCCTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS-3UTR CAA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAAGGCCATCCAGCTCTaGCGCTCCTCCTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTKAIQL*RSSSEE
Trigger: CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGAAGGCCATCCAGCTCTaGCGCTCCTCCTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLKAIQL*RSSSEE
Trigger: CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCAGGAACTTGGGCTTGTaGGCTGGCACAGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTRNLGL*AGTGGG
Trigger: GCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCCT...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAAGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGAGCCCAGGCACAGCTaGGTCCTGGGTTTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWREEPRHS*VLGFWD
Trigger: ATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCAGGCTCTGATGGGCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: LPSPRPSVAVGVPQQQALMGFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGCCCAT...CAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452765.7
CDS TCA 90 bp CCAAGCCTGGCTTTCTGTCCTCTCGCTGTTGTAGGTCTCAGGAGCTaGGCACGTCGGGCTGCCGTGAGGCTGACAGAAGCAGCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PSLAFCPLAVVGLRS*ARRAAVRLTEAAQQ
Trigger: CTGCTGGGCTGCTTCTGTCAGCCTCACGGCAGCCCGACGTGCTCAGCTCCTGAGACCTACAACAGCGAGAGGACAGAAAGCCAGGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 90 bp CTCTTCAGCCGCCATGAAGCAGCATGCTCTTCCTGCCAGGGCAGCTaGTGCCACCCTGCTCTGCCATCTGAGGCCACACAGAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LFSRHEAACSSCQGS*CHPALPSEATQRAV
Trigger: AACAGCCCTCTGTGTGGCCTCAGATGGCAGAGCAGGGTGGCAGCAGCTGCCCTGGCAGGAAGAGCATGCTGCTTCATGGCGGCTGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512014.5
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCAGGGGACCGGGGCCCTaGGAGGTAAAGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLRGPGP*EVKEWA
Trigger: GGCCCACTCCTTTACCTCCAAGGGCCCCGGTCCCCT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCAGGACATGCGTTCAGGAACTTGGGCTaGTTGGCTGGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PPGQLMAHHWIEPSPGHAFRNLG*LAGTGG
Trigger: CCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAA...CGCATGTCCTGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp CAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: QGKLVWGNRVPSSSGAWRQDSVV*TKTELG
Trigger: GCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTG...GCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCACTGGGGGTGGTGGGTAAGCCGGTGGGTGCATCAGGGCATCCTCAAGCCTTCAGGACCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: ALGVVGKPVGASGHPQAFRTFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCT...GAAGGCTTGAGGATGCCCTGATGCACCCACCGGCTTACCCACCACCCCCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000452765.7
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CTCCGGGGAGTCAGGCTCCAGGTAGGAGTCATCCTCATCGTCGTGCTCATAGTCGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: LRGVRLQVGVILIVVLIVAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...GACTATGAGCACGACGATGAGGATGACTCCTACCTGGAGCCTGACTCCCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGAGCCCAGGCACAGCTaGGTCCTGGGTTTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAEPRHS*VLGFWD
Trigger: ATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAAGCCTCAACTGTCCAGTaGGCCAGAGGGACCTATCAC +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWREASTVQ*ARGTYH
Trigger: GTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGGC...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACTGTGGCCCCCTTGGTaGAGTGAAAGCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWRELWPPW*SESTSR
Trigger: TCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACAG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACAGCTCACTGCAGCCTaGACCTTCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWREQLTAA*TFWAQA
Trigger: TGCTTGAGCCCAGAAGGTCAAGGCTGCAGTGAGCTG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS TCA 90 bp GAAGCCGGGCATGGCGGAGGACCCAGCACACACAGGGCTTTGTGCTaGCCTTTCCACTTCGCAGGACTCCGTGGTGTTGACGAAGACCGA +
Preference number: 5 (lower is better)
Translates to: EAGHGGGPSTHRALC*PFHFAGLRGVDEDR
Trigger: TCGGTCTTCGTCAACACCACGGAGTCCTGCGAAGTGGAAAGGTCAGCACAAAGCCCTGTGTGTGCTGGGTCCTCCGCCATGCCCGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCCGCCGAGCGCTCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKPPSALLA
Trigger: GGCCAGGAGAGCGCTCGGCGGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503393.8
ENST00000512131.5
CDS GCA 90 bp GTCCGTGGGGTACGGGGAAAGGCTGATATCCACAGGCCGCTCAACTaGGCCGTAGAAGCTGTCTGTGTCCGAGCTGGAGTCGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: VRGVRGKADIHRPLN*AVEAVCVRAGVAAM
Trigger: CATTGCAGCGACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGCGGCCTGTGGATATCAGCCTTTCCCCGTACCCCACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGGGCGTCCACGCGGCGGGCATG +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKGVHAAGM
Trigger: CATGCCCGCCGCGTGGACGCCCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511747.6
CDS GCA 90 bp CAGCTGGGCATGGGACAGAGCAGGGAGGTCCACTCCTCTGGTTTCTaGTGCACGCAGGGCCATGAACTTGTGCCAGCAACTCCCCAACAC +
Preference number: 5 (lower is better)
Translates to: QLGMGQSREVHSSGF*CTQGHELVPATPQH
Trigger: GTGTTGGGGAGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGTGGACCTCCCTGCTCTGTCCCATGCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 90 bp TTCAGCCGCCATGAAGCAGCATGCTCTTCCTGCCAGGGCAGCTGCTaGCACCCTGCTCTGCCATCTGAGGCCACACAGAGGGCTGTTATG +
Preference number: 5 (lower is better)
Translates to: FSRHEAACSSCQGSC*HPALPSEATQRAVM
Trigger: CATAACAGCCCTCTGTGTGGCCTCAGATGGCAGAGCAGGGTGGCAGCAGCTGCCCTGGCAGGAAGAGCATGCTGCTTCATGGCGGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512014.5
CDS CCA 90 bp ACTCACAAACAGGACCTCGCCCTCCAGGTAGAACTTAGAGTCCTGTaGGGGAAGAGAAGGGGGAGCGTCAGCAGGGCCAGGCCACTCTGC +
Preference number: 5 (lower is better)
Translates to: THKQDLALQVELRVL*GKRRGSVSRARPLC
Trigger: GCAGAGTGGCCTGGCCCTGCTGACGCTCCCCCTTCTCTTCCCCCACAGGACTCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS-3UTR CAA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAAGGCCATCCAGCTCTaGCGCTCCTCCTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: AGSYEMSITEALGKHSLAKAIQL*RSSSEE
Trigger: CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTAGGGGACCGGGGCCCTaGGAGGTAAAGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGRGPGP*EVKEWA
Trigger: GGCCCACTCCTTTACCTCCAAGGGCCCCGGTCCCCT...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGAGGGGACCGGGGCCCTaGGAGGTAAAGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLRGPGP*EVKEWA
Trigger: GGCCCACTCCTTTACCTCCAAGGGCCCCGGTCCCCT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCACAGTGGGTCCCTCTaGGAGTCCTCAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CWMRLAGSYEMSITEALGHSGSL*ESSAAR
Trigger: CCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTAGGAACTTGGGCTTGTaGGCTGGCACAGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: AGSYEMSITEALGKHSLARNLGL*AGTGGG
Trigger: GCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCCT...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTATTCAGGAACTTGGGCTaGTTGGCTGGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ALAWQPHGLPSPRPSVAVFRNLG*LAGTGG
Trigger: CCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAA...TACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCACAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPQDSVV*TKTELG
Trigger: GCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTG...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALQDSVV*TKTELG
Trigger: GCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTG...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp GGACAGGCAACCTCCTGGCACTGCCCCCTCAGCAGGCAGTCTAGGTGGAGGGAACGGGGGCTTGTAGCCTaGAACAACCTTTCCACTTCG +
Preference number: 5 (lower is better)
Translates to: GQATSWHCPLSRQSRWRERGLVA*NNLSTS
Trigger: CGAAGTGGAAAGGTTGTTCAAGGCTACAAGCCCCCG...TTCCCTCCACCTAGACTGCCTGCTGAGGGGGCAGTGCCAGGAGGTTGCCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTGAGCCCAGGCACAGCTaGGTCCTGGGTTTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: GCGSAPPCCPHSQTGPRPEPRHS*VLGFWD
Trigger: ATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTC...AGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGGGATGCTTTAGCCACTaGAGCCGGCTCCAGGTGACC +
Preference number: 5 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWGCFSH*SRLQVT
Trigger: GGTCACCTGGAGCCGGCTCAAGTGGCTAAAGCATCC...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTGCCCAGCGAGGGGCTaGATGCTGCTGGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: PTCWMRLAGSYEMSITEACPARG*MLLGHR
Trigger: TCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCA...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGTGCCCAGCGAGGGGCTaGATGCTGCTGGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQCPARG*MLLGHR
Trigger: TCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCA...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGCTCACTGCAGCCTaGACCTTCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSQLTAA*TFWAQA
Trigger: TGCTTGAGCCCAGAAGGTCAAGGCTGCAGTGAGCTG...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS TCA 90 bp GAGCAGGGAGGTCCACTCCTCTGGTTTCTGCTGCACGCAGGGCCATaGACTTGTGCCAGCAACTCCCCAACACGGAAGCTAGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: EQGGPLLWFLLHAGP*TCASNSPTRKLVRG
Trigger: CCCTCTCACTAGCTTCCGTGTTGGGGAGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGTGGACCTCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 90 bp CCCGCAGGGCCACCTCTGAATACTCGGCTTCTCCCTAGCAAACCATaGAACAACCTGCACCCTGGGTGTCAGGCCCAGCACAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PAGPPLNTRLLPSKP*NNLHPGCQAQHRAA
Trigger: TGCTGCTCTGTGCTGGGCCTGACACCCAGGGTGCAGGTTGTTTCATGGTTTGCTAGGGAGAAGCCGAGTATTCAGAGGTGGCCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513095.5
CDS GCA 90 bp AAGGAGGTTGGTGGGCGCTTGGGACAGGAGGCCCACATCTGTTGGTaGAGCCTGGAATCAAGAAGCCTTCGATGCAAACGAGGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: KEVGGRLGQEAHICW*SLESRSLRCKRGLP
Trigger: CGGGAGGCCTCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAACCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS GCA 90 bp TGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTaGGCAGCAAGGCCATCCAGCTCTTGCACTCGTCCTCGGACCCCC +
Preference number: 5 (lower is better)
Translates to: CPRAGLSFRGSGQSP*AARPSSSCTRPRTP
Trigger: GGGGGTCCGAGGACGAGTGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515183.5
CDS CCA 90 bp TTGGTGGGCGCTTGGGACAGGAGGCCCACATCTGTTGGTGCAGCCTaGAATCAAGAAGCCTTCGATGCAAACGAGGCCTCCCGCTCCACT +
Preference number: 5 (lower is better)
Translates to: LVGAWDRRPTSVGAA*NQEAFDANEASRST
Trigger: AGTGGAGCGGGAGGCCTCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CCA 90 bp TCCGAGCTGGAGTCGCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTaGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SELESLVSKGRSFFS*KWPISLRSKAIQLC
Trigger: GCAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGCGACTCCAGCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505941.5
ENST00000511185.5
ENST00000511663.5
CDS-3UTR CAA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAGGGGACCGGGGCCCTaGGAGGTAAAGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LQANDVKHPARHLTDVVSRGPGP*EVKEWA
Trigger: GGCCCACTCCTTTACCTCCAAGGGCCCCGGTCCCCT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACACAGTGGGTCCCTCTaGGAGTCCTCAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAHSGSL*ESSAAR
Trigger: CCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAACTTAGAGCCCCTGTGACTGCCTaGGCCTGGCAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: HHAAHTHKQDLALQVELRAPVTA*AWQPHG
Trigger: TCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGC...TCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452765.7
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGAGCCCAGGCACAGCTaGGTCCTGGGTTTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQEPRHS*VLGFWD
Trigger: ATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTC...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTACTCACTGCTGCTTTATaGGAGGCAACAGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: VGQQSPFVLWSLAPGSALLTAAL*EATAPT
Trigger: AGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG...TAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGCTCACTGCTGCTTTATaGGAGGCAACAGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQLTAAL*EATAPT
Trigger: AGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCGCGGAGATCACGGCATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: AKLTAALLEATAPTGACVAEITA*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATGCCGTGATCTCCGC...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCGGATGCTTTAGCCACTaGAGCCGGCTCCAGGTGACC +
Preference number: 5 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAGCFSH*SRLQVT
Trigger: GGTCACCTGGAGCCGGCTCAAGTGGCTAAAGCATCC...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS CCA 90 bp TGCAAGGAGGTTGGTGGGCGCTTGGGACAGGAGGCCCACATCTGTTaGTGCAGCCTGGAATCAAGAAGCCTTCGATGCAAACGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: CKEVGGRLGQEAHIC*CSLESRSLRCKRGL
Trigger: GAGGCCTCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAACCTCCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CCA 90 bp CTGGAGTCGCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LESLVSKGRSFFSWK*PISLRSKAIQLCRS
Trigger: TGACCTGCAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGCGACTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505941.5
ENST00000511185.5
ENST00000511663.5
CDS CCA 90 bp CTGGAGTCGCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTaGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: LESLVSKGRSFFSWK*PISLRSKAIQLLHS
Trigger: CGAGTGCAAGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGCGACTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515183.5
CDS-3UTR CAA 90 bp GCAGAAGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCAGCCCATTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AEGPPGQLMAHHWIEPSPLKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...TGGGCTGGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CAA 90 bp CCACATGGACTGCCATCACCTAGGCCCAGTGTAGCCGTAGGGGTGCCGCAGCAGTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PHGLPSPRPSVAVGVPQQLKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...CTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGGCAGTCCATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp TCTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCAAGGCCATCCAGCTCTaGCGCTCCTCCTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SFFSWKWPISLRSKAIQLKAIQL*RSSSEE
Trigger: CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTT...GAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGCACAGTGGGTCCCTCTaGGAGTCCTCAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLHSGSL*ESSAAR
Trigger: CCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTG...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTTCAGGAACTTGGGCTaGTTGGCTGGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPFRNLG*LAGTGG
Trigger: CCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTTCAGGAACTTGGGCTaGTTGGCTGGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQFRNLG*LAGTGG
Trigger: CCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GGGAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCGCTATCTTCAGGAACTaGGGCTTGTTGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: GNSSWLLLHAGGPRPAPSAIFRN*GLLAGT
Trigger: TGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGC...GGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCATTGACGAAGACCGAGTaGGGCAGTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPLTKTE*GSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAA...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAQDSVV*TKTELG
Trigger: GCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCGGGGGCTTGTAGCCTaGAACAACCTTTCCACTTCG +
Preference number: 5 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLARGLVA*NNLSTS
Trigger: CGAAGTGGAAAGGTTGTTCAAGGCTACAAGCCCCCG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAGGACCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: CWMRLAGSYEMSITEALGRTFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCT...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAAGGACCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: VVLHHAAHTHKQDLALQVRTFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCT...TACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGAGCCCAGGCACAGCTaGGTCCTGGGTTTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPEPRHS*VLGFWD
Trigger: ATCCCAGAAACCCAGGACCAAGCTGTGCCTGGGCTC...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGCTCACTGCTGCTTTATaGGAGGCAACAGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLLTAAL*EATAPT
Trigger: AGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCAAGACAACCAACTGTaGGGGTTCCCGGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWQDNQL*GFPGTA
Trigger: AGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTTG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGCCTCAACTGTCCAGTaGGCCAGAGGGACCTATCAC +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQASTVQ*ARGTYH
Trigger: GTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGGC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCTGAGGTGGTGGGGGTaGTCTGTCAAGCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWLRWWG*SVKHLH
Trigger: GTGAAGATGCTTGACAGACAACCCCCACCACCTCAG...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCAGCTCACTGCAGCCTaGACCTTCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: CWMRLAGSYEMSITEALGQLTAA*TFWAQA
Trigger: TGCTTGAGCCCAGAAGGTCAAGGCTGCAGTGAGCTG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCCCTTCCCCCATTCCCCTCGTCTAGAGACAAGCACGGCCCTCCCATGTTCCTGATGACAGAGGTGGCATaGCAGATGGGCGCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: ALPPFPSSRDKHGPPMFLMTEVA*QMGAES
Trigger: ACTTTCTGCGCCCATCTGCAATGCCACCTCTGTCAT...CAGGAACATGGGAGGGCCGTGCTTGTCTCTAGACGAGGGGAATGGGGGAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCAGGATGAGTGGGAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKQDEWEPA
Trigger: GGCTGGCTCCCACTCATCCTGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503219.5
ENST00000511663.5
CDS GCA 90 bp GCTGAACCCAGAGGCTTGCTTCGGCAAGGAGGAGGCTGTGGGCCCTaGCTTCAGGCGGTTGTGGAAACAATTCTACACATTGCATCACCG +
Preference number: 5 (lower is better)
Translates to: AEPRGLLRQGGGCGP*LQAVVETILHIASP
Trigger: CGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCCGAAGCAAGCCTCTGGGTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510074.5
ENST00000511237.5
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTTCCACTGCTCCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKLPLLLPS
Trigger: GGAGGGCAGGAGCAGTGGAAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513095.5
CDS GCA 90 bp CCTGAACCCAGAGGCTTGCTTCGGCAAGGAGGAGGCTGTGGGCCCTaGCTTCAGGCGGTTGTGGAAACAATTCTACACATTGCATCACCG +
Preference number: 5 (lower is better)
Translates to: PEPRGLLRQGGGCGP*LQAVVETILHIASP
Trigger: CGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCCGAAGCAAGCCTCTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAKGKTL*DVVSSA
Trigger: GGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPALKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp AGGGCCCCTGTGACTGCCTTGGCCTGGCAGCCACATGGACTGCCATCACCTAGGTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RAPVTALAWQPHGLPSPRWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...CCTAGGTGATGGCAGTCCATGTGGCTGCCAGGCCAAGGCAGTCACAGGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTAGGAACTTGGGCTTGTaGGCTGGCACAGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LQANDVKHPARHLTDVVSRNLGL*AGTGGG
Trigger: GCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCCT...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GTTAGTGCAGAAGGCCCTCCAGGGCAGCTCATGGCCCATCACTGGATAGAGCCCGCTATCTTCAGGAACTaGGGCTTGTTGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: VSAEGPPGQLMAHHWIEPAIFRN*GLLAGT
Trigger: TGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGC...GGGCTCTATCCAGTGATGGGCCATGAGCTGCCCTGGAGGGCCTTCTGCACTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGTTGACGAAGACCGAGTaGGGCAGTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LLDETGWVLRDVHHRGPRLTKTE*GSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAA...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCATTGACGAAGACCGAGTaGGGCAGTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: CGSAPPCCPHSQTGPRPPLTKTE*GSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAA...TGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTCAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGQDSVV*TKTELG
Trigger: GCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTG...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TTGAAGGGGAAAACGTTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGCGGGGGCTTGTAGCCTaGAACAACCTTTCCACTTCG +
Preference number: 5 (lower is better)
Translates to: LKGKTLLDVVSSAARITLRGLVA*NNLSTS
Trigger: CGAAGTGGAAAGGTTGTTCAAGGCTACAAGCCCCCG...CAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCAGGACCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLRTFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGACCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPRTFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTCAAGACAACCAACTGTaGGGGTTCCCGGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: AGSYEMSITEALGKHSLAQDNQL*GFPGTA
Trigger: AGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTTG...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTATTGCCTGGAAGACTaGGGCATCTGGGTACCACCG +
Preference number: 5 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPYCLED*GIWVPP
Trigger: CGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAATA...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTTGCTTATTGCCTGGAAGACTaGGGCATCTGGGTACCACCG +
Preference number: 5 (lower is better)
Translates to: AGSYEMSITEALGKHSLAYCLED*GIWVPP
Trigger: CGGTGGTACCCAGATGCCCAAGTCTTCCAGGCAATA...AGCAAGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGCCTCAACTGTCCAGTaGGCCAGAGGGACCTATCAC +
Preference number: 5 (lower is better)
Translates to: GSALEPNLLDETGWVLRDASTVQ*ARGTYH
Trigger: GTGATAGGTCCCTCTGGCCAACTGGACAGTTGAGGC...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACTGTGGCCCCCTTGGTaGAGTGAAAGCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: DETGWVLRDVHHRGPRQALWPPW*SESTSR
Trigger: TCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACAG...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTTGCCCAGCGAGGGGCTaGATGCTGCTGGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: LQANDVKHPARHLTDVVSCPARG*MLLGHR
Trigger: TCTGTGACCCAGCAGCATCAAGCCCCTCGCTGGGCA...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGCTGAGGTGGTGGGGGTaGTCTGTCAAGCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQLRWWG*SVKHLH
Trigger: GTGAAGATGCTTGACAGACAACCCCCACCACCTCAG...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTCTGAGGTGGTGGGGGTaGTCTGTCAAGCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPLRWWG*SVKHLH
Trigger: GTGAAGATGCTTGACAGACAACCCCCACCACCTCAG...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCGGGGGCTTGTAGCCTaGAACAACCTTCTCATAGTC +
Preference number: 5 (lower is better)
Translates to: GVVVLHHAAHTHKQDLALRGLVA*NNLLIV
Trigger: GACTATGAGAAGGTTGTTCAAGGCTACAAGCCCCCG...GAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513069.1
CDS TCA 90 bp CAGGGCTTTGTGCTGACCTTTCCACTTCGCAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCAGTGGCACCTTCTCATAGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: QGFVLTFPLRRTPWC*RRPSWAVAPSHSPR
Trigger: ACGAGGACTATGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTGCGAAGTGGAAAGGTCAGCACAAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 90 bp GCCCACATTCTTCCCAGAGGCCAGCTGACAAAGATGGACCAGATGTaGCCGGAATCCATGAAGAAAGGGCCAGTCACCTCAGGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: AHILPRGQLTKMDQM*PESMKKGPVTSGRW
Trigger: CCAACGCCCTGAGGTGACTGGCCCTTTCTTCATGGATTCCGGTCACATCTGGTCCATCTTTGTCAGCTGGCCTCTGGGAAGAATGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTGCCAGCTCTCTGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKLPALWVL
Trigger: AAGCACCCAGAGAGCTGGCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502260.5
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTCATTAGGCAGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKLIRQLQP
Trigger: GGGCTGCAGCTGCCTAATGAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508385.5
ENST00000513020.5
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCAGCATGCTCTTCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKQHALPAR
Trigger: CCTGGCAGGAAGAGCATGCTGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512014.5
CDS CCA 90 bp TGCTTCGGCAAGGAGGAGGCTGTGGGCCCTGCCTTCAGGCGGTTGTaGAAACAATTCTACACATTGCATCACCGGCCCATGTCACACTTC +
Preference number: 5 (lower is better)
Translates to: CFGKEEAVGPAFRRL*KQFYTLHHRPMSHF
Trigger: GAAGTGTGACATGGGCCGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCCGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS-3UTR CAA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPKGKTL*DVVSSA
Trigger: GGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTT...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQKGKTL*DVVSSA
Trigger: GGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCAAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: DETGWVLRDVHHRGPRQAKGKTL*DVVSSA
Trigger: GGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTT...TGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp ACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: TGQVSVGQQSPFVLWSLAHVRCF*LIWMIL
Trigger: CAAGATCATCCATATCAGCAAGAAGCACCGCACGTG...CGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCACACAGTGGGTCCCTCTaGGAGTCCTCAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSHSGSL*ESSAAR
Trigger: CCTGGCTGCTGAGGACTCCAAGAGGGACCCACTGTG...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ATESLRPLEPGAWFSPRTWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...GGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp AGCAAGGCCATCCAGCTCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGACAGGTGGAAGGACTaGAGTTTGTCACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SKAIQLLRSSSEEAEKNHDRWKD*SLSQFL
Trigger: CAGAAACTGTGACAAACTCAAGTCCTTCCACCTGTC...GTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515737.5
CDS-3UTR CAA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTCAGGAACTTGGGCTaGTTGGCTGGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: AKLTAALLEATAPTGACVFRNLG*LAGTGG
Trigger: CCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAA...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CAA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCGCTATCTTCAGGAACTaGGGCTTGTTGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGAIFRN*GLLAGT
Trigger: TGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGC...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCGGGGGCTTGTAGCCTaGAACAACCTTTCCACTTCG +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLRGLVA*NNLSTS
Trigger: CGAAGTGGAAAGGTTGTTCAAGGCTACAAGCCCCCG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCTCACTGCTGCTTTATaGGAGGCAACAGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQLTAAL*EATAPT
Trigger: AGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCATGACAGAGGTGGCATaGCAGATGGGCGCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: PTCWMRLAGSYEMSITEAMTEVA*QMGAES
Trigger: ACTTTCTGCGCCCATCTGCAATGCCACCTCTGTCAT...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTGATGGTGCTGACCCAACAC +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKLMVLTQH
Trigger: GTGTTGGGTCAGCACCATCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435136.8
ENST00000511185.5
CDS GCA 90 bp GTTAGCAGGTTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTGAACCCAGAGGCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: VSRFWAPMAFIGTGQ*ISSAAMKLNPEACF
Trigger: GAAGCAAGCCTCTGGGTTCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510074.5
ENST00000511237.5
CDS-3UTR CAA 90 bp CTTTCTTTTCGTGGAAGTGGCCAATCTCCCTGCGCAGCAAGGCCATCCAGCTCTAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LSFRGSGQSPCAARPSSSKGKTL*DVVSSA
Trigger: GGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTT...AGAGCTGGATGGCCTTGCTGCGCAGGGAGATTGGCCACTTCCACGAAAAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CAA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: CWMRLAGSYEMSITEALGHVRCF*LIWMIL
Trigger: CAAGATCATCCATATCAGCAAGAAGCACCGCACGTG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAGACAGGTGGAAGGACTaGAGTTTGTCACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPDRWKD*SLSQFL
Trigger: CAGAAACTGTGACAAACTCAAGTCCTTCCACCTGTC...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGGTGTGGTAGTGCTCCACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTGACAGGTGGAAGGACTaGAGTTTGTCACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GCGSAPPCCPHSQTGPRPDRWKD*SLSQFL
Trigger: CAGAAACTGTGACAAACTCAAGTCCTTCCACCTGTC...AGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACAGGAACTTGGGCTTGTaGGCTGGCACAGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHRNLGL*AGTGGG
Trigger: GCCCCCACCTGTGCCAGCCAACAAGCCCAAGTTCCT...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGTTCAGGAACTTGGGCTaGTTGGCTGGCACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQFRNLG*LAGTGG
Trigger: CCCACCTGTGCCAGCCAACAAGCCCAAGTTCCTGAA...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCGCTATCTTCAGGAACTaGGGCTTGTTGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLAIFRN*GLLAGT
Trigger: TGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGC...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCGGGGGCTTGTAGCCTaGAACAACCTTTCCACTTCG +
Preference number: 5 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGRGLVA*NNLSTS
Trigger: CGAAGTGGAAAGGTTGTTCAAGGCTACAAGCCCCCG...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCTCACTGCTGCTTTATaGGAGGCAACAGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLLTAAL*EATAPT
Trigger: AGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCTGTGGCCCCCTTGGTaGAGTGAAAGCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQLWPPW*SESTSR
Trigger: TCTGGAGGTGCTTTCACTCAACCAAGGGGGCCACAG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GAACTCCTCATGGCTCCTTCTTCATGCTGGAGGACCACGGCCTGCCCCATCCCAAGGCAGGAGAATCGATaGAACCCTGGAGATTTGCAT +
Preference number: 5 (lower is better)
Translates to: ELLMAPSSCWRTTACPIPRQENR*NPGDLH
Trigger: ATGCAAATCTCCAGGGTTCAATCGATTCTCCTGCCT...TGGGATGGGGCAGGCCGTGGTCCTCCAGCATGAAGAAGGAGCCATGAGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAGCCTGGGCCAGCTGCCAGAATTaGCATCTGTATGATTCAAGG +
Preference number: 5 (lower is better)
Translates to: GQGKLVWGNRVPSSSGAWASCQN*HLYDSR
Trigger: CCTTGAATCATACAGATGCAAATTCTGGCAGCTGGC...CCAGGCTCCAGAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGTGGTGTTTCGCCATGTaGTCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQWCFAM*SRLVSN
Trigger: GTTTGAGACCAACCTGGACAACATGGCGAAACACCA...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGAAGACAGCTTGATATaGGCACAAGAACAGACAGAC +
Preference number: 5 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPAEDSLI*AQEQTD
Trigger: GTCTGTCTGTTCTTGTGCCAATATCAAGCTGTCTTC...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS GCA 90 bp ACCTTGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTaGTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: TLRSSSEEAEKNHVR*FLLIWMILKGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000506932.1
ENST00000509677.5
ENST00000510074.5
ENST00000511185.5
ENST00000511237.5
ENST00000511663.5
ENST00000512131.5
CDS-3UTR CAA 90 bp AACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: NLLDETGWVLRDVHHRGPLKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...AGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLHVRCF*LIWMIL
Trigger: CAAGATCATCCATATCAGCAAGAAGCACCGCACGTG...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CGGGCTCACCTGGTGTCCAAGGGCAGGTCTTTCTTTTCGTGGAAGTGGCCAATCCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: RAHLVSKGRSFFSWKWPIHVRCF*LIWMIL
Trigger: CAAGATCATCCATATCAGCAAGAAGCACCGCACGTG...GATTGGCCACTTCCACGAAAAGAAAGACCTGCCCTTGGACACCAGGTGAGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR CAA 90 bp CCACGTGCGGTGCTTCTTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTTAAGGCCATCCAGCTCTaGCGCTCCTCCTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PRAVLLADMDDLEGENVVKAIQL*RSSSEE
Trigger: CTCCTCCGAGGAGGAGCGCAAGAGCTGGATGGCCTT...AACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513020.5
ENST00000515737.5
CDS-3UTR CAA 90 bp GAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ETGWVLRDVHHRGPRQAQWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...CTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGGCTATCTTCAGGAACTaGGGCTTGTTGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: LTAALLEATAPTGACVLAAIFRN*GLLAGT
Trigger: TGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGC...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CACCATGCTGCCCACACTCACAAACAGGACCTCGCCCTCCAGGTAGAACTTAGAGCTATCTTCAGGAACTaGGGCTTGTTGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: HHAAHTHKQDLALQVELRAIFRN*GLLAGT
Trigger: TGTGCCAGCCAACAAGCCCAAGTTCCTGAAGATAGC...TCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513069.1
ENST00000515737.5
CDS-3UTR CAA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGTTGACGAAGACCGAGTaGGGCAGTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQLTKTE*GSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAA...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAAGGACCTTCCCCGACTaGGTAGAGGAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSRTFPD*VEEFRM
Trigger: CATCCGGAACTCCTCTACCAAGTCGGGGAAGGTCCT...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGGCCAGCTGCCAGAATTaGCATCTGTATGATTCAAGG +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQASCQN*HLYDSR
Trigger: CCTTGAATCATACAGATGCAAATTCTGGCAGCTGGC...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGATGACAGAGGTGGCATaGCAGATGGGCGCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLMTEVA*QMGAES
Trigger: ACTTTCTGCGCCCATCTGCAATGCCACCTCTGTCAT...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGTTGAAGGGGAAAACGTaGTTGGACGTGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLLKGKT*LDVVSS
Trigger: TGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAA...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TTGTTGGACGTGGTCTCCTCAGCCGCCCGCATCACCCTGTTAGTGCAGAAGGCCCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LLDVVSSAARITLLVQKALIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...GGCCTTCTGCACTAACAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513020.5
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GGTTCAGCCCTAGAACCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATAGGCAGGAGAATCGATaGAACCCTGGAGATTTGCAT +
Preference number: 5 (lower is better)
Translates to: GSALEPNLLDETGWVLRDRQENR*NPGDLH
Trigger: ATGCAAATCTCCAGGGTTCAATCGATTCTCCTGCCT...ATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGGTTCTAGGGCTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTGGATGAGATGCATTGGACAAGCTaGACTGACAGTGAAATGAAT +
Preference number: 5 (lower is better)
Translates to: VLWSLAPGSALEPNLLDEMHWTS*TDSEMN
Trigger: ATTCATTTCACTGTCAGTCAAGCTTGTCCAATGCAT...CTCATCCAGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGTGGTGTTTCGCCATGTaGTCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLWCFAM*SRLVSN
Trigger: GTTTGAGACCAACCTGGACAACATGGCGAAACACCA...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGGAAGACAGCTTGATATaGGCACAAGAACAGACAGAC +
Preference number: 5 (lower is better)
Translates to: LLDETGWVLRDVHHRGPREDSLI*AQEQTD
Trigger: GTCTGTCTGTTCTTGTGCCAATATCAAGCTGTCTTC...CCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAGCACAGCCTGAAGACAGCTTGATATaGGCACAAGAACAGACAGAC +
Preference number: 5 (lower is better)
Translates to: TGWVLRDVHHRGPRQAQPEDSLI*AQEQTD
Trigger: GTCTGTCTGTTCTTGTGCCAATATCAAGCTGTCTTC...AGGCTGTGCTTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: CWMRLAGSYEMSITEALGLIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PTCWMRLAGSYEMSITEALIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...GGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGCACGTGCGGTGCTTCTaGCTGATATGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQHVRCF*LIWMIL
Trigger: CAAGATCATCCATATCAGCAAGAAGCACCGCACGTG...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp GCAAAGCTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTGGAAGGACTTGAGTTaGTCACAGTTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AKLTAALLEATAPTGACVWKDLS*SQFLEV
Trigger: CACCTCCAGAAACTGTGACAAACTCAAGTCCTTCCA...GACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
CDS-3UTR CAA 90 bp TTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGGGTGACAGGTGGAAGGACTaGAGTTTGTCACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: FIGGNSPYWSLCLSVPGGDRWKD*SLSQFL
Trigger: CAGAAACTGTGACAAACTCAAGTCCTTCCACCTGTC...ACCCCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGACAGGTGGAAGGACTaGAGTTTGTCACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLDRWKD*SLSQFL
Trigger: CAGAAACTGTGACAAACTCAAGTCCTTCCACCTGTC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp GCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGCCAGCTGCCAGAATTaGCATCTGTATGATTCAAGG +
Preference number: 5 (lower is better)
Translates to: AALLEATAPTGACVLAFLASCQN*HLYDSR
Trigger: CCTTGAATCATACAGATGCAAATTCTGGCAGCTGGC...CAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGTTGGTGTTTCGCCATGTaGTCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LQANDVKHPARHLTDVVSWCFAM*SRLVSN
Trigger: GTTTGAGACCAACCTGGACAACATGGCGAAACACCA...ACTGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACCTGCTAATAATGAAGACAGCTaGATATTGGCACAAGAACAG +
Preference number: 5 (lower is better)
Translates to: SLRPLEPGAWFSPRTQPANNEDS*ILAQEQ
Trigger: CTGTTCTTGTGCCAATATCAAGCTGTCTTCATTATT...AGCAGGTTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ACAGAGTCCCTTCGTCCTCTGGAGCCTGGCGCCTGGTTCAGCCCTAGAACCCAACTATCAAGTGCATCATaGTTGTTGGAATTGACAAGC +
Preference number: 5 (lower is better)
Translates to: TESLRPLEPGAWFSPRTQLSSAS*LLELTS
Trigger: GCTTGTCAATTCCAACAACAATGATGCACTTGATAG...TTGGGTTCTAGGGCTGAACCAGGCGCCAGGCTCCAGAGGACGAAGGGACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCGTTTACAAATTTGTGTaGGGCCACATTCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: CWMRLAGSYEMSITEALGVYKFV*GHIQRH
Trigger: ATGCCTTTGAATGTGGCCCAACACAAATTTGTAAAC...GCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCCAACCTGCTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCTATCAAGTGCATCATaGTTGTTGGAATTGACAAGC +
Preference number: 5 (lower is better)
Translates to: PNLLDETGWVLRDVHHRGLSSAS*LLELTS
Trigger: GCTTGTCAATTCCAACAACAATGATGCACTTGATAG...GCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAGCAGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGCTATCAAGTGCATCATaGTTGTTGGAATTGACAAGC +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQLSSAS*LLELTS
Trigger: GCTTGTCAATTCCAACAACAATGATGCACTTGATAG...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS TCA 90 bp CACATGGTTAAGCTGACAGACACACACATGCACACACGGATACGCTaGCAGACACACACATGCACACATGGATACGCTGACAGACACACA +
Preference number: 5 (lower is better)
Translates to: HMVKLTDTHMHTRIR*QTHTCTHGYADRHT
Trigger: TGTGTGTCTGTCAGCGTATCCATGTGTGCATGTGTGTGTCTGTCAGCGTATCCGTGTGTGCATGTGTGTGTCTGTCAGCTTAACCATGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS-3UTR CAA 90 bp CTCACTGCTGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LTAALLEATAPTGACVLALIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...CGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCAGCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TGCTTTATTGGAGGCAACAGCCCCTACTGGAGCCTGTGTCTTAGCGTTCCTGGGCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: CFIGGNSPYWSLCLSVPGLIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...CCCAGGAACGCTAAGACACAGGCTCCAGTAGGGGCTGTTGCCTCCAATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
ENST00000511747.6
ENST00000515737.5
CDS-3UTR CAA 90 bp TTCTCCAAGCAAATGATGTCAAGCACCCAGCTCGGCACCTCACAGATGTGGTCAGACAGGTGGAAGGACTaGAGTTTGTCACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: FSKQMMSSTQLGTSQMWSDRWKD*SLSQFL
Trigger: CAGAAACTGTGACAAACTCAAGTCCTTCCACCTGTC...TGACCACATCTGTGAGGTGCCGAGCTGGGTGCTTGACATCATTTGCTTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGGGATGCTTTAGCCACTaGAGCCGGCTCCAGGTGACC +
Preference number: 5 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRGCFSH*SRLQVT
Trigger: GGTCACCTGGAGCCGGCTCAAGTGGCTAAAGCATCC...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TCTGGGATTGGGACAGGGCAAGTTAGTGTGGGGCAACAGAGTCCCTTCGTCCTCATGCATTGGACAAGCTaGACTGACAGTGAAATGAAT +
Preference number: 5 (lower is better)
Translates to: SGIGTGQVSVGQQSPFVLMHWTS*TDSEMN
Trigger: ATTCATTTCACTGTCAGTCAAGCTTGTCCAATGCAT...GAGGACGAAGGGACTCTGTTGCCCCACACTAACTTGCCCTGTCCCAATCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCGCTCAGTGTATGCAAGTTCTGGAACGGGGACAGCCACTCAGGAGGTACCCAGAATAATGAAGACAGCTaGATATTGGCACAAGAACAG +
Preference number: 5 (lower is better)
Translates to: PLSVCKFWNGDSHSGGTQNNEDS*ILAQEQ
Trigger: CTGTTCTTGTGCCAATATCAAGCTGTCTTCATTATT...CTGGGTACCTCCTGAGTGGCTGTCCCCGTTCCAGAACTTGCATACACTGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CTGGATGAGACTGGCTGGGTCCTACGAGATGTCCATCACAGAGGCCCTAGGCAAAATAATGAAGACAGCTaGATATTGGCACAAGAACAG +
Preference number: 5 (lower is better)
Translates to: LDETGWVLRDVHHRGPRQNNEDS*ILAQEQ
Trigger: CTGTTCTTGTGCCAATATCAAGCTGTCTTCATTATT...TTGCCTAGGGCCTCTGTGATGGACATCTCGTAGGACCCAGCCAGTCTCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGTTGACGAAGACCGAGTaGGGCAGTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRLTKTE*GSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAA...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp ATTGTGTGTAGTTACCCCAAACTAGAAACAAACCAACTGTCCATCTACAGCAGGCAAGACAACCAACTGTaGGGGTTCCCGGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: IVCSYPKLETNQLSIYSRQDNQL*GFPGTA
Trigger: AGCAGTACCCGGGAACCCCAACAGTTGGTTGTCTTG...CCTGCTGTAGATGGACAGTTGGTTTGTTTCTAGTTTGGGGTAACTACACACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp CCAGGCATGCAGGAGGTACCCAATAACTGCTCGCTAATGCAGGGAATGAAGCAGATGCATTGGACAAGCTaGACTGACAGTGAAATGAAT +
Preference number: 5 (lower is better)
Translates to: PGMQEVPNNCSLMQGMKQMHWTS*TDSEMN
Trigger: ATTCATTTCACTGTCAGTCAAGCTTGTCCAATGCAT...CTGCTTCATTCCCTGCATTAGCGAGCAGTTATTGGGTACCTCCTGCATGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp TGGCTTCCATGGACCATACCGGAAGAACTGTCTCGGGTCACGCATAAAATACACGTTTACAAATTTGTGTaGGGCCACATTCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: WLPWTIPEELSRVTHKIHVYKFV*GHIQRH
Trigger: ATGCCTTTGAATGTGGCCCAACACAAATTTGTAAAC...GTGTATTTTATGCGTGACCCGAGACAGTTCTTCCGGTATGGTCCATGGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTCTGATATGGATGATCTaGAAGGGGAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: NLTDIITSQRSQLPEFASLIWMI*KGKTLL
Trigger: CAACAACGTTTTCCCCTTCAAGATCATCCATATCAG...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS-3UTR CAA 90 bp AATCTCACAGACATAATAACGAGCCAAAGAAGCCAGCTGCCAGAATTTGCATCTGTTTACAAATTTGTGTaGGGCCACATTCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: NLTDIITSQRSQLPEFASVYKFV*GHIQRH
Trigger: ATGCCTTTGAATGTGGCCCAACACAAATTTGTAAAC...AGATGCAAATTCTGGCAGCTGGCTTCTTTGGCTCGTTATTATGTCTGTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000503393.8
CDS CCA 72 bp GCAGAGGGCCAAGGGTCAGCCCGCCGAGCGCTCTCCTaGCCCGCGGGCCCTGGGTCGAGGCGGCGGCTTGAC +
Preference number: 6 (lower is better)
Translates to: AEGQGSARRALS*PAGPGSRRRLD
Trigger: GTCAAGCCGCCGCCTCGACCCAGGGCCCGCGGGCCAGGAGAGCGCTCGGCGGGCTGACCCTTGGCCCTCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503219.5
CDS CCA 72 bp AGCAAGGCCATCCAGCTCTGCAGGTCAGCGGGGCTGTaGTGGGCACGGTGCCACCAGGGTGGGCCCCACCGC +
Preference number: 6 (lower is better)
Translates to: SKAIQLCRSAGL*WARCHQGGPHR
Trigger: GCGGTGGGGCCCACCCTGGTGGCACCGTGCCCACCACAGCCCCGCTGACCTGCAGAGCTGGATGGCCTTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505941.5
ENST00000511185.5
ENST00000511663.5
CDS GCA 72 bp AGCGGCATCACCAGGCTGGCCCCTGGCTGTCGGTGGTaGCCCCAAGGTGGCCTCCGCATCAGGCCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: SGITRLAPGCRW*PQGGLRIRPVL
Trigger: GAGCACAGGCCTGATGCGGAGGCCACCTTGGGGGCACCACCGACAGCCAGGGGCCAGCCTGGTGATGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 72 bp GATGGTGCTGACCCAACACATGGCCCTCCGTCCTCGTaGCCTGCTCGGGGCCGGTGTCCTGGGGCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: DGADPTHGPPSS*PARGRCPGAQG
Trigger: TCCCTGGGCCCCAGGACACCGGCCCCGAGCAGGTCACGAGGACGGAGGGCCATGTGTTGGGTCAGCACCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435136.8
ENST00000502260.5
ENST00000511185.5
CDS GCA 72 bp ACCCGCTGCCTATGCCTCATCAGGGAGATTCTGCCCTaGCCCTTGCCAGGCCATGCGGCCAGGGTCCCCGTC +
Preference number: 6 (lower is better)
Translates to: TRCLCLIREILP*PLPGHAARVPV
Trigger: GACGGGGACCCTGGCCGCATGGCCTGGCAAGGGGCAGGGCAGAATCTCCCTGATGAGGCATAGGCAGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CCA 72 bp GAGCAGCTCCTCCGGTGGGGAGGAAGGAGCCACCTGTaGGGACAGGCAGCCAGCAGGGGTACAGCAGGAACG +
Preference number: 6 (lower is better)
Translates to: EQLLRWGGRSHL*GQAASRGTAGT
Trigger: CGTTCCTGCTGTACCCCTGCTGGCTGCCTGTCCCCACAGGTGGCTCCTTCCTCCCCACCGGAGGAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508385.5
ENST00000513020.5
CDS CAA 90 bp CACACCCCCAGTCACCTTGCACTCGTCCTCGGACCCCCAGTCACCTaGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGC +
Preference number: 6 (lower is better)
Translates to: HTPSHLALVLGPPVT*RSSSEEAEKNHVRC
Trigger: GCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGGTGACTGGGGGTCCGAGGACGAGTGCAAGGTGACTGGGGGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000506932.1
ENST00000509677.5
ENST00000510074.5
ENST00000511185.5
ENST00000511237.5
ENST00000511663.5
ENST00000512131.5
CDS TCA 72 bp GACCTACAGGACGGAAGCGGGAGGCTGACGGCTCCCTaGGAAACAGCGGGACCAGCCTCGGGAGACCATGGG +
Preference number: 6 (lower is better)
Translates to: DLQDGSGRLTAP*ETAGPASGDHG
Trigger: CCCATGGTCTCCCGAGGCTGGTCCCGCTGTTTCTCAGGGAGCCGTCAGCCTCCCGCTTCCGTCCTGTAGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452765.7
CDS GCA 72 bp TGTCTGTGTCCGAGCTGGAGTCGCTGCAATGCAGGGTaGGTTGGGGCGGACGGTGAGCACCAGGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: CLCPSWSRCNAG*VGADGEHQAWE
Trigger: CTCCCAGGCCTGGTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGACACAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS CCA 72 bp CACTCCCCCAACACCTGCCAGTCCACACAGCTTGGTTaGAAATCCACGGCCGGCGCGGGAGCCTCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: HSPNTCQSTQLG*KSTAGAGASAL
Trigger: CAGAGCCGAGGCTCCCGCGCCGGCCGTGGATTTCCAACCAAGCTGTGTGGACTGGCAGGTGTTGGGGGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CAA 72 bp CCACTCCCCCAACACCTGCCAGTCCACACAGCTTGGTaGGAAATCCACGGCCGGCGCGGGAGCCTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: PLPQHLPVHTAW*EIHGRRGSLGS
Trigger: AGAGCCGAGGCTCCCGCGCCGGCCGTGGATTTCCAACCAAGCTGTGTGGACTGGCAGGTGTTGGGGGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CAA 90 bp CAAGGCCATCCAGCTCTTGCACTCGTCCTCGGACCCCCAGTCACCTaGCGCTCCTCCTCGGAGGAGGCCGAGAAGAACCACGTGCGGTGC +
Preference number: 6 (lower is better)
Translates to: QGHPALALVLGPPVT*RSSSEEAEKNHVRC
Trigger: GCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGGTGACTGGGGGTCCGAGGACGAGTGCAAGAGCTGGATGGCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515183.5
CDS TCA 72 bp CACACAACCAGGACCTACAGGACGGAAGCGGGAGGCTaGCGGCTCCCTGAGAAACAGCGGGACCAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: HTTRTYRTEAGG*RLPEKQRDQPR
Trigger: CCGAGGCTGGTCCCGCTGTTTCTCAGGGAGCCGTCAGCCTCCCGCTTCCGTCCTGTAGGTCCTGGTTGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452765.7
CDS TCA 72 bp GAGTCGCTGCAATGCAGGGTGCGTTGGGGCGGACGGTaGGCACCAGGCCTGGGAGGTCCCTTGATGCTCACA +
Preference number: 6 (lower is better)
Translates to: ESLQCRVRWGGR*APGLGGPLMLT
Trigger: TGTGAGCATCAAGGGACCTCCCAGGCCTGGTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 72 bp CGCCGTAGAAGCTGTCTGTGTCCGAGCTGGAGTCGCTaGAATGCAGGGTGCGTTGGGGCGGACGGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: RRRSCLCPSWSR*NAGCVGADGEH
Trigger: GTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGACACAGACAGCTTCTACGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 72 bp CGCTGTTGTAGGTCTCAGGAGCTGAGCACGTCGGGCTaGCGTGAGGCTGACAGAAGCAGCCCAGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: RCCRSQELSTSG*READRSSPAEP
Trigger: GGGCTCTGCTGGGCTGCTTCTGTCAGCCTCACGGCAGCCCGACGTGCTCAGCTCCTGAGACCTACAACAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 72 bp AGTCTACCCGCTGCCTATGCCTCATCAGGGAGATTCTaGCCTGCCCCTTGCCAGGCCATGCGGCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: SLPAAYASSGRF*PAPCQAMRPGS
Trigger: GGACCCTGGCCGCATGGCCTGGCAAGGGGCAGGGCAGAATCTCCCTGATGAGGCATAGGCAGCGGGTAGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CAA 90 bp GAAGCTGTCTGTGTCCGAGCTGGAGTCGCTGCAATGCAGGGTGCGTaGGGGCGGACGGTGAGCACCAGGCCTGGGAGGTCCCTTGATGCT +
Preference number: 6 (lower is better)
Translates to: EAVCVRAGVAAMQGA*GRTVSTRPGRSLDA
Trigger: AGCATCAAGGGACCTCCCAGGCCTGGTGCTCACCGTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGACACAGACAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 72 bp TGCAAGAGGAAGTCTTCAAGGCATCAGGCTGTCTTCTaGCGGCCTCGGCCTGGGTCACCCGGCTGGACCCCA +
Preference number: 6 (lower is better)
Translates to: CKRKSSRHQAVF*RPRPGSPGWTP
Trigger: TGGGGTCCAGCCGGGTGACCCAGGCCGAGGCCGGCAGAAGACAGCCTGATGCCTTGAAGACTTCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509677.5
CDS CCA 72 bp CAGTTTCCCCACGCTGCAAGGAGGTTGGTGGGCGCTTaGGACAGGAGGCCCACATCTGTTGGTGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: QFPHAARRLVGA*DRRPTSVGAAW
Trigger: CCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAACCTCCTTGCAGCGTGGGGAAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CCA 72 bp GCTCAACTGCGCCGTAGAAGCTGTCTGTGTCCGAGCTaGAGTCGCTGCAATGCAGGGTGCGTTGGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: AQLRRRSCLCPS*SRCNAGCVGAD
Trigger: GTCCGCCCCAACGCACCCTGCATTGCAGCGACTCCAGCTCGGACACAGACAGCTTCTACGGCGCAGTTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5
CDS GCA 72 bp GCGGTATCCTGGAGGTGCCAGTCTCAGTCTACCCGCTaGCTATGCCTCATCAGGGAGATTCTGCCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AVSWRCQSQSTR*LCLIREILPCP
Trigger: GGGGCAGGGCAGAATCTCCCTGATGAGGCATAGGCAGCGGGTAGACTGAGACTGGCACCTCCAGGATACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 72 bp ATGGTGGAGGGGAAGGGGAGGGCGGTATCCTGGAGGTaGCAGTCTCAGTCTACCCGCTGCCTATGCCTCATC +
Preference number: 6 (lower is better)
Translates to: MVEGKGRAVSWR*QSQSTRCLCLI
Trigger: GATGAGGCATAGGCAGCGGGTAGACTGAGACTGGCACCTCCAGGATACCGCCCTCCCCTTCCCCTCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 72 bp CATGAAGCAGCATGCTCTTCCTGCCAGGGCAGCTGCTaGCACCCTGCTCTGCCATCTGAGGCCACACAGAGG +
Preference number: 6 (lower is better)
Translates to: HEAACSSCQGSC*HPALPSEATQR
Trigger: CCTCTGTGTGGCCTCAGATGGCAGAGCAGGGTGGCAGCAGCTGCCCTGGCAGGAAGAGCATGCTGCTTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512014.5
CDS CCA 72 bp GCCTTGGCCACGCCCCCAGGCATGGTTAGCAGGTTCTaGGCACCAATGGCCTTCATAGGGACAGGCCAATGC +
Preference number: 6 (lower is better)
Translates to: ALATPPGMVSRF*APMAFIGTGQC
Trigger: GCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGGCCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000502260.5
ENST00000503219.5
ENST00000503393.8
ENST00000504294.5
ENST00000508385.5
ENST00000509677.5
ENST00000510074.5
ENST00000511185.5
ENST00000511237.5
ENST00000511663.5
ENST00000511747.6
ENST00000512014.5
ENST00000512131.5
ENST00000513020.5
ENST00000513095.5
ENST00000515737.5
CDS CCA 72 bp TGCTGTGACTCCCAAGGTCAGAGGAGGCGACCCGGCTaGATACAACATGGCTGTGTGGCTCCCCTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: CCDSQGQRRRPG*IQHGCVAPLSP
Trigger: TGGGCTGAGGGGAGCCACACAGCCATGTTGTATCCAGCCGGGTCGCCTCCTCTGACCTTGGGAGTCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505941.5
ENST00000509677.5
ENST00000511185.5
ENST00000511663.5
CDS CAA 90 bp GATGTGACCGGAATCCATGAAGAAAGGGCCAGTCACCTCAGGGCGTaGGGGCCAGCAGTTCCAGCACGATCTGTGATCGGGGGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: DVTGIHEERASHLRA*GPAVPARSVIGGRE
Trigger: TTCCCGGCCCCCGATCACAGATCGTGCTGGAACTGCTGGCCCCAACGCCCTGAGGTGACTGGCCCTTTCTTCATGGATTCCGGTCACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS TCA 72 bp GCCCAGGGTCTGAAGCTGAGCGAAGTCCAGTCGCGGTaGGGGTCCCGAGGGGAAGGCATTTCAGAGATTCCA +
Preference number: 6 (lower is better)
Translates to: AQGLKLSEVQSR*GSRGEGISEIP
Trigger: TGGAATCTCTGAAATGCCTTCCCCTCGGGACCCTCACCGCGACTGGACTTCGCTCAGCTTCAGACCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508385.5
ENST00000513020.5
CDS GCA 72 bp GGACAGAGCAGGGAGGTCCACTCCTCTGGTTTCTGCTaGACGCAGGGCCATGAACTTGTGCCAGCAACTCCC +
Preference number: 6 (lower is better)
Translates to: GQSREVHSSGFC*TQGHELVPATP
Trigger: GGGAGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGTGGACCTCCCTGCTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 72 bp CATGGCGGAGGACCCAGCACACACAGGGCTTTGTGCTaGCCTTTCCACTTCGCAGGACTCCGTGGTGTTGAC +
Preference number: 6 (lower is better)
Translates to: HGGGPSTHRALC*PFHFAGLRGVD
Trigger: GTCAACACCACGGAGTCCTGCGAAGTGGAAAGGTCAGCACAAAGCCCTGTGTGTGCTGGGTCCTCCGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 72 bp GCTTTCTGTCCTCTCGCTGTTGTAGGTCTCAGGAGCTaGGCACGTCGGGCTGCCGTGAGGCTGACAGAAGCA +
Preference number: 6 (lower is better)
Translates to: AFCPLAVVGLRS*ARRAAVRLTEA
Trigger: TGCTTCTGTCAGCCTCACGGCAGCCCGACGTGCTCAGCTCCTGAGACCTACAACAGCGAGAGGACAGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 72 bp TGGCCTCTGCAAAACGGCACCTGCCAGCTCTCTGGGTaGTTCAGTCCCTTCCTCTGTAGAGGCAGACACCCT +
Preference number: 6 (lower is better)
Translates to: WPLQNGTCQLSG*FSPFLCRGRHP
Trigger: AGGGTGTCTGCCTCTACAGAGGAAGGGACTGAAGCACCCAGAGAGCTGGCAGGTGCCGTTTTGCAGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCCGCCGAGCGCT +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKPPSA
Trigger: AGCGCTCGGCGGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503393.8
ENST00000512131.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGGGCGTCCACGCG +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKGVHA
Trigger: CGCGTGGACGCCCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511747.6
CDS CAA 72 bp GGCAAGGAGGAGGCTGTGGGCCCTGCCTTCAGGCGGTaGTGGAAACAATTCTACACATTGCATCACCGGCCC +
Preference number: 6 (lower is better)
Translates to: GKEEAVGPAFRR*WKQFYTLHHRP
Trigger: GGGCCGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510074.5
ENST00000510193.1
ENST00000511237.5
CDS CAA 72 bp GGAATCCATGAAGAAAGGGCCAGTCACCTCAGGGCGTaGGGGCCAGCAGTTCCAGCACGATCTGTGATCGGG +
Preference number: 6 (lower is better)
Translates to: GIHEERASHLRA*GPAVPARSVIG
Trigger: CCCGATCACAGATCGTGCTGGAACTGCTGGCCCCAACGCCCTGAGGTGACTGGCCCTTTCTTCATGGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS CAA 90 bp CTGCAAGGAGGTTGGTGGGCGCTTGGGACAGGAGGCCCACATCTGTaGGTGCAGCCTGGAATCAAGAAGCCTTCGATGCAAACGAGGCCT +
Preference number: 6 (lower is better)
Translates to: LQGGWWALGTGGPHL*VQPGIKKPSMQTRP
Trigger: AGGCCTCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAACCTCCTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CAA 90 bp GGGAGGTCCACTCCTCTGGTTTCTGCTGCACGCAGGGCCATGAACTaGTGCCAGCAACTCCCCAACACGGAAGCTAGTGAGAGGGACACA +
Preference number: 6 (lower is better)
Translates to: GRSTPLVSAARRAMN*CQQLPNTEASERDT
Trigger: TGTGTCCCTCTCACTAGCTTCCGTGTTGGGGAGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGTGGACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CAA 90 bp GCTTGCTTCGGCAAGGAGGAGGCTGTGGGCCCTGCCTTCAGGCGGTaGTGGAAACAATTCTACACATTGCATCACCGGCCCATGTCACCT +
Preference number: 6 (lower is better)
Translates to: ACFGKEEAVGPAFRR*WKQFYTLHHRPMSP
Trigger: AGGTGACATGGGCCGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCCGAAGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510074.5
ENST00000511237.5
CDS CAA 90 bp GCTTGCTTCGGCAAGGAGGAGGCTGTGGGCCCTGCCTTCAGGCGGTaGTGGAAACAATTCTACACATTGCATCACCGGCCCATGTCACAC +
Preference number: 6 (lower is better)
Translates to: ACFGKEEAVGPAFRR*WKQFYTLHHRPMSH
Trigger: GTGTGACATGGGCCGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCCGAAGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS TCA 72 bp GGTCCACTCCTCTGGTTTCTGCTGCACGCAGGGCCATaGACTTGTGCCAGCAACTCCCCAACACGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: GPLLWFLLHAGP*TCASNSPTRKL
Trigger: TAGCTTCCGTGTTGGGGAGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS GCA 72 bp ATCTGTTGGTGCAGCCTGGAATCAAGAAGCCTTCGATaGAAACGAGGCCTCCCGCTCCACTCCCCCAACACC +
Preference number: 6 (lower is better)
Translates to: ICWCSLESRSLR*KRGLPLHSPNT
Trigger: GGTGTTGGGGGAGTGGAGCGGGAGGCCTCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS GCA 72 bp GGTGGGCGCTTGGGACAGGAGGCCCACATCTGTTGGTaGAGCCTGGAATCAAGAAGCCTTCGATGCAAACGA +
Preference number: 6 (lower is better)
Translates to: GGRLGQEAHICW*SLESRSLRCKR
Trigger: TCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS GCA 72 bp ATGGGACAGAGCAGGGAGGTCCACTCCTCTGGTTTCTaGTGCACGCAGGGCCATGAACTTGTGCCAGCAACT +
Preference number: 6 (lower is better)
Translates to: MGQSREVHSSGF*CTQGHELVPAT
Trigger: AGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGTGGACCTCCCTGCTCTGTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CCA 72 bp GCTTGGGACAGGAGGCCCACATCTGTTGGTGCAGCCTaGAATCAAGAAGCCTTCGATGCAAACGAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: AWDRRPTSVGAA*NQEAFDANEAS
Trigger: GGAGGCCTCGTTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CAA 72 bp GGTTGGTGGGCGCTTGGGACAGGAGGCCCACATCTGTaGGTGCAGCCTGGAATCAAGAAGCCTTCGATGCAA +
Preference number: 6 (lower is better)
Translates to: GWWALGTGGPHL*VQPGIKKPSMQ
Trigger: TTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS TCA 72 bp GTGCTGACCTTTCCACTTCGCAGGACTCCGTGGTGTTaGCGAAGACCGAGTTGGGCAGTGGCACCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: VLTFPLRRTPWC*RRPSWAVAPSH
Trigger: ATGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTGCGAAGTGGAAAGGTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 72 bp CCACCTCTGAATACTCGGCTTCTCCCTAGCAAACCATaGAACAACCTGCACCCTGGGTGTCAGGCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: PPLNTRLLPSKP*NNLHPGCQAQH
Trigger: GTGCTGGGCCTGACACCCAGGGTGCAGGTTGTTTCATGGTTTGCTAGGGAGAAGCCGAGTATTCAGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513095.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTGCCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKLPAL
Trigger: GAGAGCTGGCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502260.5
CDS CCA 72 bp GTTGGTGGGCGCTTGGGACAGGAGGCCCACATCTGTTaGTGCAGCCTGGAATCAAGAAGCCTTCGATGCAAA +
Preference number: 6 (lower is better)
Translates to: VGGRLGQEAHIC*CSLESRSLRCK
Trigger: TTTGCATCGAAGGCTTCTTGATTCCAGGCTGCACCAACAGATGTGGGCCTCCTGTCCCAAGCGCCCACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508338.1
CDS CAA 72 bp TGTGCTGACCTTTCCACTTCGCAGGACTCCGTGGTGTaGACGAAGACCGAGTTGGGCAGTGGCACCTTCTCA +
Preference number: 6 (lower is better)
Translates to: CADLSTSQDSVV*TKTELGSGTFS
Trigger: TGAGAAGGTGCCACTGCCCAACTCGGTCTTCGTCAACACCACGGAGTCCTGCGAAGTGGAAAGGTCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS CAA 72 bp ACTCCTCTGGTTTCTGCTGCACGCAGGGCCATGAACTaGTGCCAGCAACTCCCCAACACGGAAGCTAGTGAG +
Preference number: 6 (lower is better)
Translates to: TPLVSAARRAMN*CQQLPNTEASE
Trigger: CTCACTAGCTTCCGTGTTGGGGAGTTGCTGGCACAAGTTCATGGCCCTGCGTGCAGCAGAAACCAGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 72 bp TCGATTGAGCCAGGAGTTCCAGGAGGCAGTAAGCTATaGTTGGCCACTGCTCTCCAGTCTGGGCAACTGAGC +
Preference number: 6 (lower is better)
Translates to: SIEPGVPGGSKL*LATALQSGQLS
Trigger: GCTCAGTTGCCCAGACTGGAGAGCAGTGGCCAATCATAGCTTACTGCCTCCTGGAACTCCTGGCTCAATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356331.9
ENST00000509677.5
ENST00000515737.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTGATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKLMVL
Trigger: CAGCACCATCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435136.8
ENST00000511185.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCAGGATGAGTGG +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKQDEW
Trigger: CCACTCATCCTGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503219.5
ENST00000511663.5
CDS GCA 72 bp AGAGGCTTGCTTCGGCAAGGAGGAGGCTGTGGGCCCTaGCTTCAGGCGGTTGTGGAAACAATTCTACACATT +
Preference number: 6 (lower is better)
Translates to: RGLLRQGGGCGP*LQAVVETILHI
Trigger: AATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGGGCCCACAGCCTCCTCCTTGCCGAAGCAAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510074.5
ENST00000510193.1
ENST00000511237.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTGAACCCAGAG +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKLNPE
Trigger: CTCTGGGTTCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510074.5
ENST00000511237.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTTCCACTGCTC +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKLPLL
Trigger: GAGCAGTGGAAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513095.5
CDS CAA 72 bp TTGCTGATATGGATGATCTTGAAGGGGAAAACGTTGTaGGACGTGGTCTCCTCAGCCGCCCGCATCACCCGG +
Preference number: 6 (lower is better)
Translates to: LLIWMILKGKTL*DVVSSAARITR
Trigger: CCGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356331.9
ENST00000435136.8
ENST00000502260.5
ENST00000503219.5
ENST00000503393.8
ENST00000504294.5
ENST00000508385.5
ENST00000509677.5
ENST00000510074.5
ENST00000511185.5
ENST00000511237.5
ENST00000511663.5
ENST00000511747.6
ENST00000512014.5
ENST00000512131.5
ENST00000513095.5
CDS TCA 72 bp AGAAAAAGACAAGACAAGCAACCCAGGGTCTATGGCTaGCCGCCCATCCCCACTAGGGTCAGTGGAGGACAA +
Preference number: 6 (lower is better)
Translates to: RKRQDKQPRVYG*PPIPTRVSGGQ
Trigger: TTGTCCTCCACTGACCCTAGTGGGGATGGGCGGTCAGCCATAGACCCTGGGTTGCTTGTCTTGTCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510204.5
CDS TCA 72 bp CTTCCCAGAGGCCAGCTGACAAAGATGGACCAGATGTaGCCGGAATCCATGAAGAAAGGGCCAGTCACCTCA +
Preference number: 6 (lower is better)
Translates to: LPRGQLTKMDQM*PESMKKGPVTS
Trigger: TGAGGTGACTGGCCCTTTCTTCATGGATTCCGGTCACATCTGGTCCATCTTTGTCAGCTGGCCTCTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCTCATTAGGCAG +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKLIRQ
Trigger: CTGCCTAATGAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508385.5
ENST00000513020.5
CDS GCA 72 bp TTCTGGGCACCAATGGCCTTCATAGGGACAGGCCAATaGATCTCTTCAGCCGCCATGAAGCAGCATGCTCTT +
Preference number: 6 (lower is better)
Translates to: FWAPMAFIGTGQ*ISSAAMKQHAL
Trigger: AAGAGCATGCTGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512014.5
CDS CAA 72 bp CCTGCCTTCAGGCGGTTGTGGAAACAATTCTACACATaGCATCACCGGCCCATGTCACACTTCAGTGTGAAT +
Preference number: 6 (lower is better)
Translates to: PAFRRLWKQFYT*HHRPMSHFSVN
Trigger: ATTCACACTGAAGTGTGACATGGGCCGGTGATGCAATGTGTAGAATTGTTTCCACAACCGCCTGAAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510193.1
CDS TCA 72 bp ACGCTGACAGACACACACATGCACACATGGATACGCTaGCAGACACACACATGCACACATACTCTGACAAAC +
Preference number: 6 (lower is better)
Translates to: TLTDTHMHTWIR*QTHTCTHTLTN
Trigger: GTTTGTCAGAGTATGTGTGCATGTGTGTGTCTGTCAGCGTATCCATGTGTGCATGTGTGTGTCTGTCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504450.1
ENST00000510204.5
ENST00000515802.5