Pregenerated sensors for SH3BGRL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000142669Ensembl transcript IDs: ENST00000270792.10, ENST00000319041.6
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTaGCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: AELWLMEPTEVPISQ*QAGWRPQCLAGGSQ Trigger: CTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| 3UTR-3UTR CCA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAAAGGGGAGGCGAGGGGTaGTCACCTGAATGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: MEPTEVPISQCQAGWRPQRGGEG*SPECRG Trigger: CCCCCTGCATTCAGGTGACCACCCCTCGCCTCCCCT...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGAGAAGTGGCCTGCATTaGGGGAGGGACTCTAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GAHQPVPGRMAAPMLGWGRSGLH*GRDSKV Trigger: AACCTTAGAGTCCCTCCCCCAATGCAGGCCACTTCT...CCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGCGGCCCCAATGCTTaGCTGGGGGCAGCCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: AELWLMEPTEVPISQCQAGGPNA*LGAASI Trigger: AATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCC...TGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| 3UTR-3UTR CCA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAACAGTGCCAGGCAGGATaGCGGCCCCAATGCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MEPTEVPISQCQAGWRPQQCQAG*RPQCLA Trigger: AGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTG...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGAACTCTGGACAGGCTTaGCTCAAGCCAGCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EVPISQCQAGWRPQCLAGNSGQA*LKPASG Trigger: TCCTGAAGCTGGCTTGAGTCAAGCCTGTCCAGAGTT...CCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| 3UTR-3UTR GCA 90 bp | CTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCGGGTGGTCACCTGAATaGAGGGGGCCCAAGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LMEPTEVPISQCQAGWRPGWSPE*RGPKCF Trigger: AAAGCACTTGGGCCCCCTGCATTCAGGTGACCACCC...GGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| 3UTR-3UTR GCA 90 bp | CTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCTGCAGGGGGCCCAAGTaGTTTGTGGCAGATATGACC | + |
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Preference number: 2 (lower is better) Translates to: LMEPTEVPISQCQAGWRPCRGPK*FVADMT Trigger: GGTCATATCTGCCACAAAGCACTTGGGCCCCCTGCA...GGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGTCAAAAGGTCCTTCATaGCCAGGTGAAGGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GTNRGAHQPVPGRMAAPMSKGPS*PGEGWG Trigger: CCCCCAGCCTTCACCTGGCCATGAAGGACCTTTTGA...CATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR CCA 90 bp | AACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTCAAAAGGTCCTTCATaGCCAGGTGAAGGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: NQQRCPSASARQDGGPNASKGPS*PGEGWG Trigger: CCCCCAGCCTTCACCTGGCCATGAAGGACCTTTTGA...AGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR CCA 90 bp | AACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTAGAAGTGGCCTGCATTaGGGGAGGGACTCTAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NQQRCPSASARQDGGPNARSGLH*GRDSKV Trigger: AACCTTAGAGTCCCTCCCCCAATGCAGGCCACTTCT...AGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGTGGCGGCCCCAATGCTaGGCTGGGGGCAGCCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: EVPISQCQAGWRPQCLAGWRPQC*AGGSQH Trigger: ATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCA...CCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR CAA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAAGGGGGCAGCCAGCATTaGGGGCTGTTGCTTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: MEPTEVPISQCQAGWRPQGGSQH*GLLLKT Trigger: TGTCTTAAGCAACAGCCCCAAATGCTGGCTGCCCCC...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| 3UTR-3UTR CAA 90 bp | TTGGCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGGGGGCAGCCAGCATTaGGGGCTGTTGCTTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: LAELWLMEPTEVPISQCQGGSQH*GLLLKT Trigger: TGTCTTAAGCAACAGCCCCAAATGCTGGCTGCCCCC...CTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR CCA 90 bp | GGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCCTCTAGGGTCCTCCTaGGAGAGGGACTGCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GAHQPVPGRMAAPMLGWGPLGSS*ERDCGA Trigger: GGCCCCGCAGTCCCTCTCCCAGGAGGACCCTAGAGG...CCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR CCA 90 bp | CTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCGGGGTGGGGTGGCCTTaGGGTTGCCTGCCAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LMEPTEVPISQCQAGWRPGVGWP*GCLPRL Trigger: GAGCCTTGGCAGGCAACCCCAAGGCCACCCCACCCC...GGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | CTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCTTTCGCGGGAGCCGGTaGCCGACGTGCTGTAGACGC | + |
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Preference number: 4 (lower is better) Translates to: LMEPTEVPISQCQAGWRPFRGSR*PTCCRR Trigger: GCGTCTACAGCACGTCGGTCACCGGCTCCCGCGAAA...GGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAAGGGGTGGGGTGGCCTTaGGGTTGCCTGCCAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MEPTEVPISQCQAGWRPQGVGWP*GCLPRL Trigger: GAGCCTTGGCAGGCAACCCCAAGGCCACCCCACCCC...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | CTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCGGCGGCCCCAATGCTTaGCTGGGGGCAGCCAGCATT | + |
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Preference number: 4 (lower is better) Translates to: LMEPTEVPISQCQAGWRPGGPNA*LGAASI Trigger: AATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCC...GGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGCGGCCCCAATGCTTaGCTGGGGGCAGCCAGCATT | + |
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Preference number: 4 (lower is better) Translates to: TEVPISQCQAGWRPQCLAGGPNA*LGAASI Trigger: AATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCC...AGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | CAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGCAGTGCCAGGCAGGATaGCGGCCCCAATGCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QRCPSASARQDGGPNAWLQCQAG*RPQCLA Trigger: AGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTG...CAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATTTCGCGGGAGCCGGTaGCCGACGTGCTGTAGACGC | + |
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Preference number: 4 (lower is better) Translates to: MEPTEVPISQCQAGWRPQFRGSR*PTCCRR Trigger: GCGTCTACAGCACGTCGGTCACCGGCTCCCGCGAAA...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR GCA 90 bp | CTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCGGGTGGCCTTGGGGTTaGCTGCCAAGGCTCGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LMEPTEVPISQCQAGWRPGWPWG*LPRLAS Trigger: AGATGCGAGCCTTGGCAGGCAACCCCAAGGCCACCC...GGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | GGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGTCAAAAGGTCCTTCATaGCCAGGTGAAGGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GAHQPVPGRMAAPMLGWGSKGPS*PGEGWG Trigger: CCCCCAGCCTTCACCTGGCCATGAAGGACCTTTTGA...CCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | GGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGGCCCCAATGCTTGGCTaGGGGCAGCCAGCATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GTNRGAHQPVPGRMAAPMAPMLG*GQPAFG Trigger: CCCAAATGCTGGCTGCCCCCAGCCAAGCATTGGGGC...CATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTCAGTGCCAGGCAGGATaGCGGCCCCAATGCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TEVPISQCQAGWRPQCLAQCQAG*RPQCLA Trigger: AGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTG...AGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | CCACAGCCTCCACGAAGAGCTCATAGTCCTGGAGAAGGGGAGGCGAGGGGTGGTAGGGGAGGCGAGGGGTaGTCACCTGAATGCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PQPPRRAHSPGEGEARGGRGGEG*SPECRG Trigger: CCCCCTGCATTCAGGTGACCACCCCTCGCCTCCCCT...ACCACCCCTCGCCTCCCCTTCTCCAGGACTATGAGCTCTTCGTGGAGGCTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | GGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGAACTCTGGACAGGCTTaGCTCAAGCCAGCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GAHQPVPGRMAAPMLGWGNSGQA*LKPASG Trigger: TCCTGAAGCTGGCTTGAGTCAAGCCTGTCCAGAGTT...CCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | GAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGACGAGGGGTGGTCACCTaGATGCAGGGGGCCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ELWLMEPTEVPISQCQAGRGVVT*MQGAQV Trigger: CACTTGGGCCCCCTGCATTCAGGTGACCACCCCTCG...TCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR GCA 90 bp | CCACAGCCTCCACGAAGAGCTCATAGTCCTGGAGAAGGGGAGGCGAGGGGTGGTGGGTGGCCTTGGGGTTaGCTGCCAAGGCTCGCATCT | + |
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Preference number: 4 (lower is better) Translates to: PQPPRRAHSPGEGEARGGGWPWG*LPRLAS Trigger: AGATGCGAGCCTTGGCAGGCAACCCCAAGGCCACCC...ACCACCCCTCGCCTCCCCTTCTCCAGGACTATGAGCTCTTCGTGGAGGCTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR GCA 90 bp | CAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGTGGAACCAACAGAGGTaGCCATCAGCCAGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QRCPSASARQDGGPNAWLWNQQR*PSASAR Trigger: CCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCA...CAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | AACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTGCCCCAATGCTTGGCTaGGGGCAGCCAGCATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NQQRCPSASARQDGGPNAAPMLG*GQPAFG Trigger: CCCAAATGCTGGCTGCCCCCAGCCAAGCATTGGGGC...AGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | GAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGCCTTTGGCAGAGCTCTaGCTGATGGAACCAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: EVPISQCQAGWRPQCLAGPLAEL*LMEPTE Trigger: CTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAAAGG...CCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR GCA 90 bp | AACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGAACCAACAGAGGTaGCCATCAGCCAGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NQQRCPSASARQDGGPNAWNQQR*PSASAR Trigger: CCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCA...AGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGTTGACAATCTGGGGTaGGGTGGCCTTGGGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: AELWLMEPTEVPISQCQAVDNLG*GGLGVA Trigger: GGCAACCCCAAGGCCACCCCACCCCAGATTGTCAAC...TGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR CCA 90 bp | CTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGGTTGACAATCTGGGGTaGGGTGGCCTTGGGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LWLMEPTEVPISQCQAGWVDNLG*GGLGVA Trigger: GGCAACCCCAAGGCCACCCCACCCCAGATTGTCAAC...CCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | CTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGTGGCAGAGCTCTGGCTaGTGGAACCAACAGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LWLMEPTEVPISQCQAGWWQSSG*WNQQRC Trigger: GCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCA...CCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR GCA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCAGGGGGCCCAAGTaGTTTGTGGCAGATATGACC | + |
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Preference number: 4 (lower is better) Translates to: MEPTEVPISQCQAGWRPQCRGPK*FVADMT Trigger: GGTCATATCTGCCACAAAGCACTTGGGCCCCCTGCA...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | GGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGAGAAGTGGCCTGCATTaGGGGAGGGACTCTAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GTNRGAHQPVPGRMAAPMRSGLH*GRDSKV Trigger: AACCTTAGAGTCCCTCCCCCAATGCAGGCCACTTCT...CATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR GCA 90 bp | GGGTGGTCACCTGAATGCAGGGGGCCCAAGTGCTTTGTGGCAGATATGACCCTGGGGTGGTCACCTGAATaGAGGGGGCCCAAGTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GWSPECRGPKCFVADMTLGWSPE*RGPKCF Trigger: AAAGCACTTGGGCCCCCTGCATTCAGGTGACCACCC...CAGGGTCATATCTGCCACAAAGCACTTGGGCCCCCTGCATTCAGGTGACCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | CTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGAACTCTGGACAGGCTTaGCTCAAGCCAGCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LWLMEPTEVPISQCQAGWNSGQA*LKPASG Trigger: TCCTGAAGCTGGCTTGAGTCAAGCCTGTCCAGAGTT...CCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | CTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCATACCCCACAGTACTaGTCCCCGTTGACAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LWLMEPTEVPISQCQAGWHTPQY*SPLTIW Trigger: CCAGATTGTCAACGGGGACCAGTACTGTGGGGTATG...CCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR TCA 90 bp | GGGTGGTCACCTGAATGCAGGGGGCCCAAGTGCTTTGTGGCAGATATGACCCTGGCTTTGTGGCAGATATaGCCCTGGCTAGAGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GWSPECRGPKCFVADMTLALWQI*PWLESS Trigger: AGAGGACTCTAGCCAGGGTCATATCTGCCACAAAGC...CAGGGTCATATCTGCCACAAAGCACTTGGGCCCCCTGCATTCAGGTGACCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR CCA 90 bp | TTGGCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGAGAAGTGGCCTGCATTaGGGGAGGGACTCTAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LAELWLMEPTEVPISQCQRSGLH*GRDSKV Trigger: AACCTTAGAGTCCCTCCCCCAATGCAGGCCACTTCT...CTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR CAA 90 bp | GGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGGGGACTGCGGGGCCTTaGGCAGAGCTCTGGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: GAHQPVPGRMAAPMLGWGGTAGP*AELWLM Trigger: CATCAGCCAGAGCTCTGCCAAAGGCCCCGCAGTCCC...CCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACC 69% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000270792.10 |
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| CDS-3UTR CAA 90 bp | GGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGTGGCGGCCCCAATGCTaGGCTGGGGGCAGCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GTNRGAHQPVPGRMAAPMWRPQC*AGGSQH Trigger: ATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCA...CATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CAA 90 bp | ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATCGCTCTGCTGGGACTaGATTTCGCGGGAGCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: MEPTEVPISQCQAGWRPQSLCWD*ISREPV Trigger: CACCGGCTCCCGCGAAATCAAGTCCCAGCAGAGCGA...TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CAA 90 bp | CCACAGCCTCCACGAAGAGCTCATAGTCCTGGAGAAGGGGAGGCGAGGGGTGGTTCGCTCTGCTGGGACTaGATTTCGCGGGAGCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PQPPRRAHSPGEGEARGGSLCWD*ISREPV Trigger: CACCGGCTCCCGCGAAATCAAGTCCCAGCAGAGCGA...ACCACCCCTCGCCTCCCCTTCTCCAGGACTATGAGCTCTTCGTGGAGGCTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR CAA 90 bp | GAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGAACTCTGGACAGGCTaGACTCAAGCCAGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: EVPISQCQAGWRPQCLAGELWTG*TQASFR Trigger: CCTGAAGCTGGCTTGAGTCAAGCCTGTCCAGAGTTC...CCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CAA 90 bp | GGGTGGTCACCTGAATGCAGGGGGCCCAAGTGCTTTGTGGCAGATATGACCCTGTGGCGGCCCCAATGCTaGGCTGGGGGCAGCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GWSPECRGPKCFVADMTLWRPQC*AGGSQH Trigger: ATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCA...CAGGGTCATATCTGCCACAAAGCACTTGGGCCCCCTGCATTCAGGTGACCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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| CDS-3UTR CAA 90 bp | CAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGAACTCTGGACAGGCTaGACTCAAGCCAGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QRCPSASARQDGGPNAWLELWTG*TQASFR Trigger: CCTGAAGCTGGCTTGAGTCAAGCCTGTCCAGAGTTC...CAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS-3UTR CAA 90 bp | GGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGGGGGGCAGCCAGCATTaGGGGCTGTTGCTTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: GTNRGAHQPVPGRMAAPMGGSQH*GLLLKT Trigger: TGTCTTAAGCAACAGCCCCAAATGCTGGCTGCCCCC...CATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000270792.10 ENST00000319041.6 |
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| CDS GCA 72 bp | GGCGAGGGGTGGTCACCTGAATGCAGGGGGCCCAAGTaGTTTGTGGCAGATATGACCCTGGCTAGAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GEGWSPECRGPK*FVADMTLARVL Trigger: GAGGACTCTAGCCAGGGTCATATCTGCCACAAAGCACTTGGGCCCCCTGCATTCAGGTGACCACCCCTCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319041.6 |
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