Pregenerated sensors for SH3BGR (Homo sapiens)
Ensembl gene IDs: ENSG00000185437Ensembl transcript IDs: ENST00000333634.10, ENST00000333634.9, ENST00000380631.5, ENST00000380634.5, ENST00000380637.7, ENST00000423596.5, ENST00000440288.6, ENST00000447939.1, ENST00000452550.5, ENST00000458295.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAGACATTTGAAATGTTGCTTCATAGC | + |
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Preference number: 2 (lower is better) Translates to: SSVTLGVPASSQSIL*SLVCGETFEMLLHS Trigger: GCTATGAAGCAACATTTCAAATGTCTCTCCACAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000333634.9 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| 3UTR CAA 90 bp | GTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTTGAAATGTTGCTTCATAGCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VTLGVPASSQSILLS*VCGETFEMLLHSFH Trigger: ATGGAAGCTATGAAGCAACATTTCAAATGTCTCTCCACAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000333634.9 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: RQHKSSVTLGVPASSQSIFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...AATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000333634.9 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| 3UTR-3UTR CAA 90 bp | TGTATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: CMIREIPPCTSNQVRQHKFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...CTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000333634.9 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| 3UTR-3UTR CAA 90 bp | AAAATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KIFKSQDCQAHEGMHKRSSQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...AGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000333634.9 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCATTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: IFKSQDCQAHEGMHKRSSFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...TGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000333634.9 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR-3UTR CAA 90 bp | CATAAGGCGCATTTGAAGAAATACTATTGTTGTATCACAGAGAACTTCCATGCCAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: HKAHLKKYYCCITENFHASQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...GGCATGGAAGTTCTCTGTGATACAACAATAGTATTTCTTCAAATGCGCCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333634.9 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR-3UTR CAA 90 bp | AGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTAATTTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: SQDCQAHEGMHKRSSHLIFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...AATTAAATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000333634.9 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR-3UTR CAA 90 bp | AAAATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: KIFKSQDCQAHEGMHKRSSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...AGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000333634.9 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR-3UTR CAA 90 bp | AAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTAAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
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Preference number: 3 (lower is better) Translates to: KSQDCQAHEGMHKRSSHLSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...TAAATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000333634.9 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR-3UTR CAA 90 bp | GGCGCATTTGAAGAAATACTATTGTTGTATCACAGAGAACTTCCATGCCTTGAATTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: GAFEEILLLYHRELPCLEFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...TTCAAGGCATGGAAGTTCTCTGTGATACAACAATAGTATTTCTTCAAATGCGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333634.9 ENST00000380637.7 ENST00000452550.5 |
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| CDS-3UTR TCA 90 bp | ACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTGAGCGCCAGAGCGCGTaGCAGGCTCCCTCGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TSNQVRQHKSSVTLGVPAERQSA*QAPSSR Trigger: CCGAGACGAGGGAGCCTGTCACGCGCTCTGGCGCTC...AGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | GTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTAACGCGAGGCCACACTaGCCTCCAGGCCCAAGACGC | + |
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Preference number: 4 (lower is better) Translates to: VRQHKSSVTLGVPASSQSNARPH*PPGPRR Trigger: GCGTCTTGGGCCTGGAGGTCAGTGTGGCCTCGCGTT...ACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380637.7 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGAGCGCCAGAGCGCGTaGCAGGCTCCCTCGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFERQSA*QAPSSR Trigger: CCGAGACGAGGGAGCCTGTCACGCGCTCTGGCGCTC...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380631.5 ENST00000458295.5 |
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| CDS-3UTR GCA 90 bp | AGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGGTTTGGCTCCCTCGTCTCGGTaGGGCCACGCGGGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SNPGCAGFKPKYSVEFGLAPSSR*GHAGRQ Trigger: CTGCCTTCCCGCGTGGCCGCACCGAGACGAGGGAGC...CAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380631.5 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | GAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCAACGCGAGGCCACACTaGCCTCCAGGCCCAAGACGC | + |
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Preference number: 4 (lower is better) Translates to: EIPPCTSNQVRQHKSSVTNARPH*PPGPRR Trigger: GCGTCTTGGGCCTGGAGGTCAGTGTGGCCTCGCGTT...GGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380637.7 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | CAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGAGTACTGCTCCTCATTaGAGATCTGGGGAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QHKSSVTLGVPASSQSILSTAPH*RSGEAK Trigger: CTTTGCCTCCCCAGATCTTCAATGAGGAGCAGTACT...CAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR GCA 90 bp | AGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTTGCCCACATCTTCACTaGCCTCTTTTTGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RQHKSSVTLGVPASSQSICPHLH*PLFVPQ Trigger: CTGAGGCACAAAAAGAGGGCAGTGAAGATGTGGGCA...AATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTTCTTCATTCTTCTCCTaGGCTTCAGGGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFSSFFS*ASGRLP Trigger: GGGCAACCTCCCTGAAGCCCAGGAGAAGAATGAAGA...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS-3UTR GCA 90 bp | TTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTGCCCACATCTTCACTaGCCTCTTTTTGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FGRYLHVHLTRSGSISPQCPHLH*PLFVPQ Trigger: CTGAGGCACAAAAAGAGGGCAGTGAAGATGTGGGCA...CTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
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| CDS-3UTR CCA 90 bp | CAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTCCTCATTGAAGATCTaGGGAGGCAAAGGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: QHKSSVTLGVPASSQSILSSLKI*GGKGIP Trigger: TGGGATTCCTTTGCCTCCCCAGATCTTCAATGAGGA...CAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CCA 90 bp | AGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTTCCTCATTGAAGATCTaGGGAGGCAAAGGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: RQHKSSVTLGVPASSQSISSLKI*GGKGIP Trigger: TGGGATTCCTTTGCCTCCCCAGATCTTCAATGAGGA...AATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | ATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCAGTACTGCTCCTCATTaGAGATCTGGGGAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: MIREIPPCTSNQVRQHKSSTAPH*RSGEAK Trigger: CTTTGCCTCCCCAGATCTTCAATGAGGAGCAGTACT...GGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | ATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCATCCTTCTTCTTCCTTTaGGTCTGGAGGAGGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: IREIPPCTSNQVRQHKSSSFFFL*VWRRSQ Trigger: TTGGCTCCTCCTCCAGACTCAAAGGAAGAAGAAGGA...TGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTACTGCCCTCTTTTTGTaGCTCAGTTTCTCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFTALFL*LSFSTF Trigger: GAAGGTGGAGAAACTGAGGCACAAAAAGAGGGCAGT...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS-3UTR GCA 90 bp | TTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGACTGCCCTCTTTTTGTaGCTCAGTTTCTCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: FGRYLHVHLTRSGSISPQTALFL*LSFSTF Trigger: GAAGGTGGAGAAACTGAGGCACAAAAAGAGGGCAGT...CTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
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| CDS-3UTR GCA 90 bp | AGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGGTTTGTGCCCACATCTTCACTaGCCTCTTTTTGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SNPGCAGFKPKYSVEFGLCPHLH*PLFVPQ Trigger: CTGAGGCACAAAAAGAGGGCAGTGAAGATGTGGGCA...CAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS-3UTR GCA 90 bp | TCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAAACCCACTACTTCTTaGTGTTTCTTCCTAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: SNQVRQHKSSVTLGVPASKPTTS*CFFLRL Trigger: CAGTCTTAGGAAGAAACAGCAAGAAGTAGTGGGTTT...TGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458295.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTTCCTCATTGAAGATCTaGGGAGGCAAAGGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFSSLKI*GGKGIP Trigger: TGGGATTCCTTTGCCTCCCCAGATCTTCAATGAGGA...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTCTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFLPSLL*LSLLLL Trigger: AAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAG...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CCA 90 bp | TTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGCTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FGRYLHVHLTRSGSISPQLPSLL*LSLLLL Trigger: AAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAG...CTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | CAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGGGAAGAAATGAAGCATaGAAAGGCCTAGGAATCTTC | + |
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Preference number: 4 (lower is better) Translates to: QHKSSVTLGVPASSQSILGRNEA*KGLGIF Trigger: GAAGATTCCTAGGCCTTTTCATGCTTCATTTCTTCC...CAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR GCA 90 bp | GAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCACTGCCCTCTTTTTGTaGCTCAGTTTCTCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: EIPPCTSNQVRQHKSSVTTALFL*LSFSTF Trigger: GAAGGTGGAGAAACTGAGGCACAAAAAGAGGGCAGT...GGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
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| CDS-3UTR GCA 90 bp | TGTATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTGCCCACATCTTCACTaGCCTCTTTTTGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CMIREIPPCTSNQVRQHKCPHLH*PLFVPQ Trigger: CTGAGGCACAAAAAGAGGGCAGTGAAGATGTGGGCA...CTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
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| CDS-3UTR CCA 90 bp | ATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCCTCATTGAAGATCTaGGGAGGCAAAGGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: MIREIPPCTSNQVRQHKSSSLKI*GGKGIP Trigger: TGGGATTCCTTTGCCTCCCCAGATCTTCAATGAGGA...GGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CCA 90 bp | AGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGGTTTGCTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SNPGCAGFKPKYSVEFGLLPSLL*LSLLLL Trigger: AAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAG...CAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CCA 90 bp | ATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCACTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IREIPPCTSNQVRQHKSSLPSLL*LSLLLL Trigger: AAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAG...TGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR GCA 90 bp | CAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGAAACCCACTACTTCTTaGTGTTTCTTCCTAATCGCT | + |
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Preference number: 4 (lower is better) Translates to: QHKSSVTLGVPASSQSILKPTTS*CFFLIA Trigger: AGCGATTAGGAAGAAACAGCAAGAAGTAGTGGGTTT...CAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452550.5 |
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| CDS-3UTR TCA 90 bp | TCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTCCTTCTTCTTCCTTTaGGTCTGGAGGAGGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SKAKTVRHMKVCINGLHISFFFL*VWRRSQ Trigger: TTGGCTCCTCCTCCAGACTCAAAGGAAGAAGAAGGA...AATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452550.5 |
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| CDS-3UTR GCA 90 bp | TTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGAAACCCACTACTTCTTaGTGTTTCTTCCTAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: FGRYLHVHLTRSGSISPQKPTTS*CFFLIS Trigger: GGAGATTAGGAAGAAACAGCAAGAAGTAGTGGGTTT...CTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380634.5 |
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| 3UTR CAA 72 bp | ACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAGACATTTGAAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: TLGVPASSQSIL*SLVCGETFEML Trigger: CAACATTTCAAATGTCTCTCCACAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000333634.9 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR TCA 90 bp | AAAATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTAGTACTGCTCCTCATTaGAGATCTGGGGAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIFKSQDCQAHEGMHKRSSTAPH*RSGEAK Trigger: CTTTGCCTCCCCAGATCTTCAATGAGGAGCAGTACT...AGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| CDS-3UTR GCA 90 bp | GAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCAGGCACATGAAGGTATaGATAAACGGTCTTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: EIPPCTSNQVRQHKSSVTRHMKV*INGLHI Trigger: AATGTGAAGACCGTTTATGCATACCTTCATGTGCCT...GGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 |
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| CDS-3UTR TCA 90 bp | GGCGCATTTGAAGAAATACTATTGTTGTATCACAGAGAACTTCCATGCCTTGAAAGTACTGCTCCTCATTaGAGATCTGGGGAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAFEEILLLYHRELPCLESTAPH*RSGEAK Trigger: CTTTGCCTCCCCAGATCTTCAATGAGGAGCAGTACT...TTCAAGGCATGGAAGTTCTCTGTGATACAACAATAGTATTTCTTCAAATGCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380637.7 ENST00000452550.5 |
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| CDS-3UTR GCA 90 bp | AAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTAACTGCCCTCTTTTTGTaGCTCAGTTTCTCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSQDCQAHEGMHKRSSHLTALFL*LSFSTF Trigger: GAAGGTGGAGAAACTGAGGCACAAAAAGAGGGCAGT...TAAATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
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| CDS-3UTR CCA 90 bp | AAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTACTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSQDCQAHEGMHKRSSHLLPSLL*LSLLLL Trigger: AAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAG...TAAATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| 3UTR CAA 72 bp | GGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTTGAAATGTTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVPASSQSILLS*VCGETFEMLLH Trigger: ATGAAGCAACATTTCAAATGTCTCTCCACAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000333634.9 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR GCA 90 bp | AGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTAATTAGGCACATGAAGGTATaGATAAACGGTCTTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: SQDCQAHEGMHKRSSHLIRHMKV*INGLHI Trigger: AATGTGAAGACCGTTTATGCATACCTTCATGTGCCT...AATTAAATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 |
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| CDS-3UTR GCA 90 bp | AAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTAAGGCACATGAAGGTATaGATAAACGGTCTTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: KSQDCQAHEGMHKRSSHLRHMKV*INGLHI Trigger: AATGTGAAGACCGTTTATGCATACCTTCATGTGCCT...TAAATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 |
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| CDS-3UTR GCA 90 bp | ATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCAAAACCCACTACTTCTTaGTGTTTCTTCCTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFKSQDCQAHEGMHKRSSKPTTS*CFFLIS Trigger: GGAAATTAGGAAGAAACAGCAAGAAGTAGTGGGTTT...TGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380637.7 |
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| CDS-3UTR CAA 90 bp | GTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTCCTTCTCTGATCCCTTaGAGTCTGGAGGAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRQHKSSVTLGVPASSQSPSLIP*SLEEEP Trigger: TGGCTCCTCCTCCAGACTCAAAGGGATCAGAGAAGG...ACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS-3UTR CAA 90 bp | CAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTGGGCTTCAGGGAGGTaGCCCACATCTTCACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QHKSSVTLGVPASSQSILWASGR*PTSSLP Trigger: GGGCAGTGAAGATGTGGGCAACCTCCCTGAAGCCCA...CAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTTGGGCTTCAGGGAGGTaGCCCACATCTTCACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFWASGR*PTSSLP Trigger: GGGCAGTGAAGATGTGGGCAACCTCCCTGAAGCCCA...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 |
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| CDS CCA 90 bp | CTTCCCCTTCCGCACCCTCCATGGCTATTTCTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTTCATTCTTCTCCTGGGCTTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPLPHPPWLFLPSLL*LSLLLLHSSPGLQG Trigger: TCCCTGAAGCCCAGGAGAAGAATGAAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAGAAATAGCCATGGAGGGTGCGGAAGGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000333634.10 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000423596.5 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTCTCCTTCTTCTTCCTTaGAGTCTGGAGGAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLSNPGCAGFKPKYSVEFLLLLP*SLEEEP Trigger: TGGCTCCTCCTCCAGACTCAAAGGAAGAAGAAGGAG...AAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | AGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTCATCCACCTCCTGTaGTCTTCATCTCCAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: RQHKSSVTLGVPASSQSILIHLL*SSSPAI Trigger: TATTGCTGGAGATGAAGACAACAGGAGGTGGATGAG...AATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | TCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTGGGCTTCAGGGAGGTaGCCCACATCTTCACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKAKTVRHMKVCINGLHIWASGR*PTSSLP Trigger: GGGCAGTGAAGATGTGGGCAACCTCCCTGAAGCCCA...AATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
||
| CDS-3UTR CAA 90 bp | GTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRQHKSSVTLGVPASSQSSQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...ACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | ACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSNQVRQHKSSVTLGVPASQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...AGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | ATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCCTCCTTCTTCTTCCTTaGAGTCTGGAGGAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MIREIPPCTSNQVRQHKSLLLLP*SLEEEP Trigger: TGGCTCCTCCTCCAGACTCAAAGGAAGAAGAAGGAG...GGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | AAAATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTGGGCTTCAGGGAGGTaGCCCACATCTTCACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KIFKSQDCQAHEGMHKRSWASGR*PTSSLP Trigger: GGGCAGTGAAGATGTGGGCAACCTCCCTGAAGCCCA...AGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 |
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| CDS-3UTR CAA 90 bp | ACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTAAAACCCACTACTTCTaGCTGTTTCTTCCTAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TSNQVRQHKSSVTLGVPAKTHYF*LFLPKT Trigger: AGTCTTAGGAAGAAACAGCAAGAAGTAGTGGGTTTT...AGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | GAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCCTCATCCACCTCCTGTaGTCTTCATCTCCAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: EIPPCTSNQVRQHKSSVTLIHLL*SSSPAI Trigger: TATTGCTGGAGATGAAGACAACAGGAGGTGGATGAG...GGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | TCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: SNQVRQHKSSVTLGVPASSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...TGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | TTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FGRYLHVHLTRSGSISPQSQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...CTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | CAGCATAAGTCCTCAGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QHKSSVTLGVPASSQSILFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...CAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACTGAGGACTTATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | AGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGGTTTGAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNPGCAGFKPKYSVEFGLSQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...CAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | TCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTCTCATCCACCTCCTGTaGTCTTCATCTCCAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SKAKTVRHMKVCINGLHILIHLL*SSSPAI Trigger: TATTGCTGGAGATGAAGACAACAGGAGGTGGATGAG...AATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| CDS-3UTR CAA 90 bp | TTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: FGRYLHVHLTRSGSISPQSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...CTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 ENST00000458295.5 |
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| CDS-3UTR CAA 90 bp | AAAATCTTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTCTCATCCACCTCCTGTaGTCTTCATCTCCAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: KIFKSQDCQAHEGMHKRSLIHLL*SSSPAI Trigger: TATTGCTGGAGATGAAGACAACAGGAGGTGGATGAG...AGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAAGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 |
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| CDS-3UTR CAA 90 bp | GAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EIPPCTSNQVRQHKSSVTFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...GGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | AGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGGTTTGTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SNPGCAGFKPKYSVEFGLFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...CAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | AGTAACCCTGGGTGTGCCGGCTTCAAGCCAAAGTATTCTGTTGAGTTTGGTTTGAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: SNPGCAGFKPKYSVEFGLSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...CAAACCAAACTCAACAGAATACTTTGGCTTGAAGCCGGCACACCCAGGGTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | GAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCTCAGTAACCAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: EIPPCTSNQVRQHKSSVTSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...GGTTACTGAGGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | ATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGTCCAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: MIREIPPCTSNQVRQHKSSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...GGACTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 ENST00000458295.5 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATAGCCAAAGTATTCTGTaGAGTTTGGTTTGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKSQDCQAHEGMHKRSSHSQSIL*SLVCGE Trigger: CTCTCCACAAACCAAACTCAACAGAATACTTTGGCT...ATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 |
||
| CDS-3UTR CAA 90 bp | TGTATGATTCGGGAGATACCTCCATGTACATCTAACCAGGTCAGGCAGCATAAGAAAACCCACTACTTCTaGCTGTTTCTTCCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CMIREIPPCTSNQVRQHKKTHYF*LFLPNF Trigger: GAAATTAGGAAGAAACAGCAAGAAGTAGTGGGTTTT...CTTATGCTGCCTGACCTGGTTAGATGTACATGGAGGTATCTCCCGAATCATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380637.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATTTTGTGGAGAGACATTaGAAATGTTGCTTCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FKSQDCQAHEGMHKRSSHFVERH*KCCFIA Trigger: AGCTATGAAGCAACATTTCAAATGTCTCTCCACAAA...ATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGCCAAGACTGTCAGGCACATGAAGGTATGCATAAACGGTCTTCACATAGTATTCTGTTGAGTTaGGTTTGTGGAGAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: FKSQDCQAHEGMHKRSSHSILLS*VCGETF Trigger: AAATGTCTCTCCACAAACCAAACTCAACAGAATACT...ATGTGAAGACCGTTTATGCATACCTTCATGTGCCTGACAGTCTTGGCTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380634.5 ENST00000380637.7 ENST00000447939.1 ENST00000452550.5 |
||
| CDS TCA 72 bp | CAGAGCCTTAAGAGGTCAGGAGAGCGCCAGAGCGCGTaGCAGGCTCCCTCGTCTCGGTGCGGCCACGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QSLKRSGERQSA*QAPSSRCGHAG Trigger: TCCCGCGTGGCCGCACCGAGACGAGGGAGCCTGTCACGCGCTCTGGCGCTCTCCTGACCTCTTAAGGCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380631.5 ENST00000440288.6 ENST00000458295.5 |
||
| CDS CCA 72 bp | CCGCACCCTCCATGGCTATTTCTTCCGTCTCTTCTGTaGCTGTCTCTCCTTCTTCTTCATTCTTCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHPPWLFLPSLL*LSLLLLHSSPG Trigger: CCCAGGAGAAGAATGAAGAAGAAGGAGAGACAGCCACAGAAGAGACGGAAGAAATAGCCATGGAGGGTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000333634.10 ENST00000380631.5 ENST00000380634.5 ENST00000380637.7 ENST00000423596.5 |
||
| CDS CAA 72 bp | ATCGCTATGGACCCAGAAGATGTAGCAACAAACACTTaGATAACCATTTCGACAGTTGGAAAGAGGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IAMDPEDVATNT*ITISTVGKRTP Trigger: GGGAGTCCTCTTTCCAACTGTCGAAATGGTTATCAAAGTGTTTGTTGCTACATCTTCTGGGTCCATAGCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333634.10 |
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