RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH2D6 (Homo sapiens)

Ensembl gene IDs: ENSG00000152292

Ensembl transcript IDs: ENST00000340326.2, ENST00000389938.7, ENST00000477170.5, ENST00000481395.7, ENST00000481426.6, ENST00000488219.2, ENST00000488657.3, ENST00000651736.1, ENST00000651962.1

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCGCCACGGAGGAGAAGAGCTCCTCAC +
Preference number: 1 (lower is better)
Translates to: PGCRCVCPQGAEGAT*SAGPWPPRRRRAPH
Trigger: GTGAGGAGCTCTTCTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000651962.1
3UTR TCA 90 bp CCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCGCCACGGAGGAGAAGAGGGTTCCTG +
Preference number: 1 (lower is better)
Translates to: PGCRCVCPQGAEGAT*SAGPWPPRRRRGFL
Trigger: CAGGAACCCTCTTCTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481426.6
3UTR CCA 90 bp CCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAGGAGAAGAGGGTTCCTGCCCTCCCG +
Preference number: 1 (lower is better)
Translates to: PLCLSTRGRGCHMKC*TMAATEEKRVPALP
Trigger: CGGGAGGGCAGGAACCCTCTTCTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481426.6
3UTR CCA 90 bp CCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAGGAGAAGAGCTCCTCACGGTTCCTG +
Preference number: 1 (lower is better)
Translates to: PLCLSTRGRGCHMKC*TMAATEEKSSSRFL
Trigger: CAGGAACCGTGAGGAGCTCTTCTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000651962.1
3UTR CCA 90 bp GGGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTACTTCGCTGTaGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGG +
Preference number: 1 (lower is better)
Translates to: GTRSKLGPKAVCTSL*PQGLVGKSRQVSSR
Trigger: CCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651962.1
3UTR CCA 90 bp GGAGAGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTaGGGCCAAAGGCGGTGTGTACTTCGCTGTGGCCTCAAGGCTTGG +
Preference number: 1 (lower is better)
Translates to: GERKTAQGGAGQEAN*GQRRCVLRCGLKAW
Trigger: CCAAGCCTTGAGGCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
3UTR GCA 90 bp CATGCCAGGGCACTCAATCAGGCATGCGGAGCCGAGGACCCAGGGTaGAGTTATTTATGTTCCCATCTCCTATGCTCAACTGAGTCCCCC +
Preference number: 1 (lower is better)
Translates to: HARALNQACGAEDPG*SYLCSHLLCSTESP
Trigger: GGGGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGCCCTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR GCA 90 bp TCAGCAGATCACTGTCCTGTGCATACACACAGTCACTCAGAAACATaGCAGGGCACTCAATCAGGCATGCGGAGCCGAGGACCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: SADHCPVHTHSHSET*QGTQSGMRSRGPRV
Trigger: CACCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGCCCTGGCATGTTTCTGAGTGACTGTGTGTATGCACAGGACAGTGATCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR CCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTG +
Preference number: 1 (lower is better)
Translates to: RGSFAVPAVPVLSPD*SRPPRFLHPGPSEL
Trigger: CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
3UTR CCA 90 bp TTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATTCCTaGAGGCCAGGAAGAGGGTGTCAGCCTTGGAGAGGCAACAGAGAG +
Preference number: 1 (lower is better)
Translates to: FLHPGPSELGRHLHS*RPGRGCQPWRGNRE
Trigger: CTCTCTGTTGCCTCTCCAAGGCTGACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
3UTR GCA 90 bp GGAGCCGAGGACCCAGGGTGCAGTTATTTATGTTCCCATCTCCTATaGTCAACTGAGTCCCCCTCAGGCAGAACAAAGTGGTGTCCCTGT +
Preference number: 1 (lower is better)
Translates to: GAEDPGCSYLCSHLL*STESPSGRTKWCPC
Trigger: ACAGGGACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCCTCGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR TCA 90 bp GGACCCAGGGTGCAGTTATTTATGTTCCCATCTCCTATGCTCAACTaGGTCCCCCTCAGGCAGAACAAAGTGGTGTCCCTGTCTCAGCAG +
Preference number: 1 (lower is better)
Translates to: GPRVQLFMFPSPMLN*VPLRQNKVVSLSQQ
Trigger: CTGCTGAGACAGGGACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR GCA 90 bp ATACACACAGTCACTCAGAAACATGCCAGGGCACTCAATCAGGCATaGGGAGCCGAGGACCCAGGGTGCAGTTATTTATGTTCCCATCTC +
Preference number: 1 (lower is better)
Translates to: IHTVTQKHARALNQA*GAEDPGCSYLCSHL
Trigger: GAGATGGGAACATAAATAACTGCACCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGCCCTGGCATGTTTCTGAGTGACTGTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR GCA 90 bp ACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTGTaGATACACACAGTCACTCAGAAACATGCCAGGGCACTCAATCAG +
Preference number: 1 (lower is better)
Translates to: TVPRVPRLSQQITVL*IHTVTQKHARALNQ
Trigger: CTGATTGAGTGCCCTGGCATGTTTCTGAGTGACTGTGTGTATGCACAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR GCA 90 bp TTATTGAATGTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTaGCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: LLNVNLCKVGQSLSG*PRPTSRCERILCCS
Trigger: GGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCACATTCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
3UTR-3UTR TCA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCCCCATCCTCAGCAGCTaGGGCACTCCCAGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: AVASRLGGEEQAGEFPAAPILSS*GTPSGG
Trigger: GCCCCCACTGGGAGTGCCTCAGCTGCTGAGGATGGG...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR-3UTR TCA 90 bp CTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 2 (lower is better)
Translates to: LSTRGRGCHMKCWTMAATGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp GGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GKSRQVSSRLPLCLSTRGASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...GCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp CTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGGCACTCAATCAGGCATaGGGAGCCGAGGACCCAGGG +
Preference number: 2 (lower is better)
Translates to: LWPQGLVGKSRQVSSRLPALNQA*GAEDPG
Trigger: CCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGC...CGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR-3UTR CCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCGCACCACTGATGTCCTaGGCAGAGGGCCTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: GIVASAIQPPDGNVEDPAAPLMS*AEGLRA
Trigger: TGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGC...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR-3UTR TCA 90 bp TGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 2 (lower is better)
Translates to: CLSTRGRGCHMKCWTMAAGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...GGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR TCA 90 bp CTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: LWPQGLVGKSRQVSSRLPAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...CGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR TCA 90 bp GCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: ASRLGGEEQAGEFPAAAVAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...CACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp GGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GEFPAAAVSVHKGQRVPHASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...ATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp GCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 2 (lower is better)
Translates to: AAAVSVHKGQRVPHEVLDHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...GTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp AGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 2 (lower is better)
Translates to: SRQVSSRLPLCLSTRGRGCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...CCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR TCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 2 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp AGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RGCQLRCGLKAWWGRAGRASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
3UTR-3UTR TCA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 2 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
3UTR-3UTR GCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 2 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp AGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGCCATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: RGCQLRCGLKAWWGRAGRPFRVS*GAVVGL
Trigger: CAGGCCTACCACAGCCCCCCAGGAAACTCGGAATGG...CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR-3UTR TCA 90 bp CTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCCCCGAGTACCAAGGCTaGGTCAGCAGATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: LPLCLSTRGRGCHMKCWTPEYQG*VSRSLS
Trigger: GGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGG...GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
3UTR-3UTR TCA 90 bp AGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGCCCGAGTACCAAGGCTaGGTCAGCAGATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: RVSASLWPQGLVGKSRQVPEYQG*VSRSLS
Trigger: GGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGG...CACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR-3UTR TCA 90 bp CCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTTCTCCTATGCTCAACTaGGTCCCCCTCAGGCAGAAC +
Preference number: 2 (lower is better)
Translates to: PQGLVGKSRQVSSRLPLCSPMLN*VPLRQN
Trigger: GTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGA...ACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR-3UTR GCA 90 bp TGGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: WADTCILRCGLKAWWGRAASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...TGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
3UTR-3UTR TCA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 2 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 2 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
3UTR-3UTR CCA 90 bp GAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: EDPLLFQQCLCCPLTGLGLRHSQ*GLQREE
Trigger: CTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAG...GCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR-3UTR CCA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCACATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 2 (lower is better)
Translates to: QGALGPQVDVRGSFAVPAHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
3UTR-3UTR CCA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 2 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
3UTR-3UTR CCA 90 bp GAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGTCAGGCAGAACAAAGTaGTGTCCCTGTCTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: EEQAGEFPAAAVSVHKGQSGRTK*CPCLSS
Trigger: GCTGCTGAGACAGGGACACCACTTTGTTCTGCCTGA...CTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR-3UTR TCA 90 bp GCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGCCCGAGTACCAAGGCTaGGTCAGCAGATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: AGHSQQHSGHSSPSTKAEPEYQG*VSRSLS
Trigger: GGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGG...CTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
3UTR-3UTR CCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 2 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACGTGTCAGCTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHVSASL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACAC...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR-3UTR CCA 90 bp CAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 2 (lower is better)
Translates to: QAGEFPAAAVSVHKGQRVPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...CACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 2 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
3UTR-3UTR GCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 2 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR GCA 90 bp AGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGGCCGAGGACCCAGGGTaGAGTTATTTATGTTCCCAT +
Preference number: 2 (lower is better)
Translates to: RGCQLRCGLKAWWGRAGRAEDPG*SYLCSH
Trigger: ATGGGAACATAAATAACTGCACCCTGGGTCCTCGGC...CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR-3UTR CCA 90 bp CCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATTCTTCGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 2 (lower is better)
Translates to: PRFLHPGPSELGRHLHSSCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...CGAAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
3UTR-3UTR CCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGAGACACCTGCATTCCTaGAGGCCAGGAAGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWRHLHS*RPGRGC
Trigger: ACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGTCT...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
3UTR-3UTR CCA 90 bp ACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGAGCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 2 (lower is better)
Translates to: TRGRGCHMKCWTMAATEEPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...CTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCTGCATTCTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRLHSSL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAG...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477170.5
3UTR-3UTR CCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGCAGGACCTAGTGAACTaGGCAGACACCTGCATTCCT +
Preference number: 2 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWQDLVN*ADTCIP
Trigger: AGGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
3UTR-3UTR CCA 90 bp TGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 2 (lower is better)
Translates to: CLSTRGRGCHMKCWTMAAPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...GGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGCAACAGAGAGGGCAGTaGAAGGCTCTAGGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERQQRGQ*KALGEH
Trigger: ATGCTCACCTAGAGCCTTCCACTGCCCTCTCTGTTG...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
3UTR-3UTR GCA 90 bp AGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTTTAGAGGCAGCATCTaGTGTTCCATTCCGAGTTTC +
Preference number: 2 (lower is better)
Translates to: RGCQLRCGLKAWWGRAGRFRGSI*CSIPSF
Trigger: GAAACTCGGAATGGAACAGCAGATGCTGCCTCTAAA...CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR-3UTR CCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGACAAGAAGCAAACTaGGGCCAAAGGCGGTGTGTA +
Preference number: 2 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELGQEAN*GQRRCV
Trigger: TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCC...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
3UTR-3UTR CCA 90 bp TGTTTATTGAATGTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTGCCCTTGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: CLLNVNLCKVGQSLSGCPCGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...AGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCACATTCAATAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
3UTR-3UTR CCA 90 bp GCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 2 (lower is better)
Translates to: AGHSQQHSGHSSPSTKAEPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...CTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CCA 90 bp TGTTTATTGAATGTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTGCCCTCAACAGAGAGGGCAGTaGAAGGCTCTAGGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: CLLNVNLCKVGQSLSGCPQQRGQ*KALGEH
Trigger: ATGCTCACCTAGAGCCTTCCACTGCCCTCTCTGTTG...AGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCACATTCAATAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
3UTR GCA 72 bp TGGCCGCCACGGAGGAGAAGAGCTCCTCACGGTTCCTaGCCTCCCGGCCCAGGGCATAGTGGCGTCCGCCAT +
Preference number: 3 (lower is better)
Translates to: WPPRRRRAPHGS*PPGPGHSGVRH
Trigger: ATGGCGGACGCCACTATGCCCTGGGCCGGGAGGGCAGGAACCGTGAGGAGCTCTTCTCCTCCGTGGCGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000651962.1
3UTR-3UTR CAA 90 bp GCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 3 (lower is better)
Translates to: ASRLGGEEQAGEFPAAAVRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...CACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CAA 90 bp CTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 3 (lower is better)
Translates to: LWPQGLVGKSRQVSSRLPRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...CGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CAA 90 bp GGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 3 (lower is better)
Translates to: GKSRQVSSRLPLCLSTRGRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...GCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
3UTR-3UTR CAA 90 bp GCAAACTGGGGCCAAAGGCGGTGTGTACTTCGCTGTGGCCTCAAGGCTTGGTGGCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 3 (lower is better)
Translates to: ANWGQRRCVLRCGLKAWWRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...CCACCAAGCCTTGAGGCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
3UTR CCA 72 bp CTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAGGAGAAGAGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: LSTRGRGCHMKC*TMAATEEKSSS
Trigger: TGAGGAGCTCTTCTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000651962.1
3UTR CCA 72 bp AGCAAACTGGGGCCAAAGGCGGTGTGTACTTCGCTGTaGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SKLGPKAVCTSL*PQGLVGKSRQV
Trigger: CACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651962.1
3UTR CCA 72 bp AAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTaGGGCCAAAGGCGGTGTGTACTTCGCTGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: KTAQGGAGQEAN*GQRRCVLRCGL
Trigger: GAGGCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
3UTR CCA 72 bp TTAGAGGCAGCATCTGCTGTTCCATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTGGGCACCACTGATGTC +
Preference number: 3 (lower is better)
Translates to: LEAASAVPFRVS*GAVVGLGTTDV
Trigger: GACATCAGTGGTGCCCAGGCCTACCACAGCCCCCCAGGAAACTCGGAATGGAACAGCAGATGCTGCCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389938.7
3UTR CCA 72 bp TTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTCCTTCATCCAGGACCT +
Preference number: 3 (lower is better)
Translates to: FAVPAVPVLSPD*SRPPRFLHPGP
Trigger: AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
3UTR CCA 72 bp GGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTaGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: GHHGSFIQDLVN*ADTCILRCGLK
Trigger: CTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
3UTR GCA 72 bp GTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTaGCCTAGGCCCACAAGTAGATGTGAGAGGATCCTT +
Preference number: 3 (lower is better)
Translates to: VNLCKVGQSLSG*PRPTSRCERIL
Trigger: AAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
3UTR GCA 72 bp GCACTCAATCAGGCATGCGGAGCCGAGGACCCAGGGTaGAGTTATTTATGTTCCCATCTCCTATGCTCAACT +
Preference number: 3 (lower is better)
Translates to: ALNQACGAEDPG*SYLCSHLLCST
Trigger: AGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR GCA 72 bp CGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTGTaGATACACACAGTCACTCAGAAACATGCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: RVPRLSQQITVL*IHTVTQKHARA
Trigger: TGCCCTGGCATGTTTCTGAGTGACTGTGTGTATGCACAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
3UTR TCA 72 bp GTGCAGTTATTTATGTTCCCATCTCCTATGCTCAACTaGGTCCCCCTCAGGCAGAACAAAGTGGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: VQLFMFPSPMLN*VPLRQNKVVSL
Trigger: CAGGGACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR TCA 90 bp TGCCCTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAACCCATCCTCAGCAGCTaGGGCACTCCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CPPGPGHSGVRHPAAGWEPILSS*GTPSGG
Trigger: GCCCCCACTGGGAGTGCCTCAGCTGCTGAGGATGGG...TTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR TCA 90 bp TGCCCTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAAACTGTCCTCAGCAGCTaGGGCACTCCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CPPGPGHSGVRHPAAGWETVLSS*GTPSGG
Trigger: GCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGT...TTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp CTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGGGAGTCCACACATCTaGGGGGTGGGAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPAQGIVASAIQPPDGNVGSPHI*GVGAVA
Trigger: GGCCACCGCTCCCACCCCCCAGATGTGTGGACTCCC...AACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp TGCCCTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAAAGAGGCCTCTCACCATaGTGGGCTGAGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CPPGPGHSGVRHPAAGWERGLSP*WAEAGV
Trigger: CACCCCTGCCTCAGCCCACCATGGTGAGAGGCCTCT...TTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR TCA 90 bp GTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 4 (lower is better)
Translates to: VASAIQPPDGNVEDPASEGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...CTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp GGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCGGGCAGGGGCTAGACTaGGGGGCAGAGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: GLVGKSRQVSSRLPLCLSGQGLD*GAEPHR
Trigger: CCTGTGAGGCTCTGCCCCTCAGTCTAGCCCCTGCCC...GGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp AGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCTGCTCATGGTGGGCTaGGGCAGGGGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: RQVSSRLPLCLSTRGRGCLLMVG*GRGGDG
Trigger: GCCATCGCCACCCCTGCCTCAGCCCACCATGAGCAG...GCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR TCA 90 bp CAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 4 (lower is better)
Translates to: QVSSRLPLCLSTRGRGCHGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...GTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp GGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGGGGGCCTGCTCCCACTaGGCTTGTCCATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GEEQAGEFPAAAVSVHKGGACSH*ACPWQR
Trigger: CCTCTGCCATGGACAAGCTCAGTGGGAGCAGGCCCC...CCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000651962.1
CDS-3UTR TCA 90 bp CACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGAGGGCAGGGGCTAGACTaGGGGGCAGAGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: HKGQRVPHEVLDHGRHGGGQGLD*GAEPHR
Trigger: CCTGTGAGGCTCTGCCCCTCAGTCTAGCCCCTGCCC...TCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp AGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCGGGCAGGGGCTAGACTaGGGGGCAGAGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RLGGEEQAGEFPAAAVSVGQGLD*GAEPHR
Trigger: CCTGTGAGGCTCTGCCCCTCAGTCTAGCCCCTGCCC...GACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGGCAGGGGCTAGACTaGGGGGCAGAGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGGQGLD*GAEPHR
Trigger: CCTGTGAGGCTCTGCCCCTCAGTCTAGCCCCTGCCC...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp CAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QAGEFPAAAVSVHKGQRVGWRWL*WTQGAR
Trigger: TCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCC...CACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp CAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QVSSRLPLCLSTRGRGCHGWRWL*WTQGAR
Trigger: TCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCC...GTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTCACCACTCTGGACGATaGACCCTGCTCTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPAQGIVASAIQPPDGNVHHSGR*TLLSPP
Trigger: GGGAGGCGAGAGCAGGGTGCATCGTCCAGAGTGGTG...AACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEEQAGEFPAAAVSVHKGHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...CCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp CCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 4 (lower is better)
Translates to: PQGLVGKSRQVSSRLPLCGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...ACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp GTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VASAIQPPDGNVEDPASEAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...CTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp CTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LWPQGLVGKSRQVSSRLPAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...CGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp TCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGGGGCCTGCTCCCACTaGGCTTGTCCATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SSRRMGMLKTRPRRSTARGACSH*ACPWQR
Trigger: CCTCTGCCATGGACAAGCTCAGTGGGAGCAGGCCCC...CCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000651962.1
CDS-3UTR TCA 90 bp GAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGTTCAGCATGGTGGGCTaGGGCAGGGGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: EEQAGEFPAAAVSVHKGQFSMVG*GRGGDG
Trigger: GCCATCGCCACCCCTGCCTCAGCCCACCATGCTGAA...CTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481426.6
CDS-3UTR GCA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCCTTCACCACGAGTCCTaGCGGCCACACAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: AVASRLGGEEQAGEFPAALHHES*RPHRDP
Trigger: AGGGTCCCTGTGTGGCCGGCAGGACTCGTGGTGAAG...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCAGGAGTCCTCCTCAGTaGCAGGAAGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GIVASAIQPPDGNVEDPARSPPQ*QEGGQG
Trigger: CCCCTGCCCACCTTCCTGGCACTGAGGAGGACTCCT...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp GGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCGCACTCAATCAGGCATaGGGAGCCGAGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLVGKSRQVSSRLPLCLSALNQA*GAEDPG
Trigger: CCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGC...GGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGACATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGTGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VASAIQPPDGNVEDPASECGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...CTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp CCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGAGTCCACACATCTaGGGGGTGGGAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPDGNVEDPASEKHCQGEGSPHI*GVGAVA
Trigger: GGCCACCGCTCCCACCCCCCAGATGTGTGGACTCCC...TTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGGGCCTGGCACCACTCTaGACGATGCACCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QAGEFPAAAVSVHKGQRVGLAPL*TMHPAL
Trigger: GAGAGCAGGGTGCATCGTCCAGAGTGGTGCCAGGCC...CACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGTCCTCGTCCTCCTCCTaGGCCTGGAGGAAGGGATGC +
Preference number: 4 (lower is better)
Translates to: EQAGEFPAAAVSVHKGQRSSSSS*AWRKGC
Trigger: GCATCCCTTCCTCCAGGCCCAGGAGGAGGACGAGGA...CCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR TCA 90 bp GAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 4 (lower is better)
Translates to: EEDSPRWGGTRSKLGPKAGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...CGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGCGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RMGMLKTRPRRSTARVKGGWRWL*WTQGAR
Trigger: TCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCC...GCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSSRRMGMLKTRPRRSTAASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...GGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LPAQGIVASAIQPPDGNVTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...AACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTAGGAGTCCTCCTCAGTaGCAGGAAGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PQGLVGKSRQVSSRLPLCRSPPQ*QEGGQG
Trigger: CCCCTGCCCACCTTCCTGGCACTGAGGAGGACTCCT...ACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACCCAAAGATAGGTCCCTaGTTTCCGGCCACCGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVSSRLPLCLSTRGRGCHPKIGP*FPATGR
Trigger: CCTGCCGGTGGCCGGAAAGCAGGGACCTATCTTTGG...GTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCCAAAGATAGGTCCCTaGTTTCCGGCCACCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LWPQGLVGKSRQVSSRLPPKIGP*FPATGR
Trigger: CCTGCCGGTGGCCGGAAAGCAGGGACCTATCTTTGG...CGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCGGAGAAGAGGGTTCCTaGCCTCCCGGCCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LPLCLSTRGRGCHMKCWTGEEGS*PPGPGH
Trigger: ATGCCCTGGGCCGGGAGGGCAGGAACCCTCTTCTCC...GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481426.6
CDS-3UTR CCA 90 bp GGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GLVGKSRQVSSRLPLCLSLRHSQ*GLQREE
Trigger: CTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAG...GGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
CDS-3UTR CCA 90 bp CGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGCCATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 4 (lower is better)
Translates to: RMGMLKTRPRRSTARVKGHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...GCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTACTTCGCTGTGGCCATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGQEANWGQRRCVLRCGHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...GCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GKSRQVSSRLPLCLSTRGCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...GCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GLVGKSRQVSSRLPLCLSCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...GGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCATGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGEFPAAAVSVHKGQRVPCGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...TGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTC +
Preference number: 4 (lower is better)
Translates to: GIVASAIQPPDGNVEDPAVLSPD*SRPPRF
Trigger: GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCAC...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCGGAGCTTTGCCTCCCTaGAGCCCAGGATCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RQVSSRLPLCLSTRGRGCGALPP*SPGSAT
Trigger: TGTGGCAGATCCTGGGCTCCAGGGAGGCAAAGCTCC...GCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp AGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTCAGTGCCAGGAAGGTaGGCAGGGGCTAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: SRQVSSRLPLCLSTRGRGSVPGR*AGARLR
Trigger: CCTCAGTCTAGCCCCTGCCCACCTTCCTGGCACTGA...CCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGATGCACCCTGCTCATaGTGGGCTGAGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGIVASAIQPPDGNVEDPDAPCS*WAEAGV
Trigger: CACCCCTGCCTCAGCCCACCATGAGCAGGGTGCATC...CGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR CCA 90 bp TCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCGCACCACTGATGTCCTaGGCAGAGGGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRLPLCLSTRGRGCHMKCAPLMS*AEGLRA
Trigger: TGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGC...GCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCCTGCTCCCTTCAGCATaGTGGGCTGAGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SRLPLCLSTRGRGCHMKCLLPSA*WAEAGV
Trigger: CACCCCTGCCTCAGCCCACCATGCTGAAGGGAGCAG...GCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481426.6
CDS-3UTR CCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTGGCCTCTCACCATGGTaGGCTGAGGCAGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPGLSPW*AEAGVA
Trigger: CGCCACCCCTGCCTCAGCCCACCATGGTGAGAGGCC...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp AGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCACTGTCCTCAGCAGCTaGGGCACTCCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGRQPKVGRDKKQTGAKGTVLSS*GTPSGG
Trigger: GCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGT...GCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651736.1
CDS-3UTR TCA 90 bp TCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRLPLCLSTRGRGCHMKCAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...GCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp TTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: FAVASRLGGEEQAGEFPAAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...AGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp AGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGGGACCTACATCCCTaGCCTGGAGGACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGCQLRCGLKAWWGRAGRWDLHP*PGGPRP
Trigger: AGGCCTGGGTCCTCCAGGTCAGGGATGTAGGTCCCA...CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR TCA 90 bp TCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTCTGCTCCTCCAATGTaGCTGAGGCCCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: SRLPLCLSTRGRGCHMKCSAPPM*LRPRQT
Trigger: GGTCTGCCTGGGCCTCAGTCACATTGGAGGAGCAGA...GCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR TCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTGGGGCCTGCTCCCACTaGGCTTGTCCATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPGACSH*ACPWQR
Trigger: CCTCTGCCATGGACAAGCTCAGTGGGAGCAGGCCCC...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp GGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTGGGCAGGGGCTAGACTaGGGGGCAGAGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: GQSLSGCPRPTSRCERILGQGLD*GAEPHR
Trigger: CCTGTGAGGCTCTGCCCCTCAGTCTAGCCCCTGCCC...AAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPGWRWL*WTQGAR
Trigger: TCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCC...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCCTGCTCATGGTGGGCTaGGGCAGGGGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: PDWSRPPRFLHPGPSELGLLMVG*GRGGDG
Trigger: GCCATCGCCACCCCTGCCTCAGCCCACCATGAGCAG...GCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR TCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGCTCACCATGGTGGGCTaGGGCAGGGGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWLTMVG*GRGGDG
Trigger: GCCATCGCCACCCCTGCCTCAGCCCACCATGGTGAG...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp AGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: RVSASLWPQGLVGKSRQVGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...CACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR GCA 90 bp GCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: AAAVSVHKGQRVPHEVLDGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...GTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp CAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: QAGEFPAAAVSVHKGQRVTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...CACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTTCAGGAGGCCACTCTaGCTGCTTAGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GIVASAIQPPDGNVEDPAFRRPL*LLSRLW
Trigger: CCACAGCCTGCTAAGCAGGCAGAGTGGCCTCCTGAA...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp TCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACCACCACTCTGGACGATaGACCCTGCTCTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVHKGQRVPHEVLDHGRHHHSGR*TLLSPP
Trigger: GGGAGGCGAGAGCAGGGTGCATCGTCCAGAGTGGTG...GTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp GAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGCACCACTCTGGACGATaGACCCTGCTCTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EEDSPRWGGTRSKLGPKAHHSGR*TLLSPP
Trigger: GGGAGGCGAGAGCAGGGTGCATCGTCCAGAGTGGTG...CGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCCACCGGCAGGCTCACTaGTCCCTTCAGTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: AVASRLGGEEQAGEFPAAHRQAH*SLQWEM
Trigger: CATTTCCCACTGAAGGGAGCAGTGAGCCTGCCGGTG...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 4 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFIHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: RLGGEEQAGEFPAAAVSVCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...GACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp AGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGTGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRRMGMLKTRPRRSTARVCGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...CACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGATGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGCGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGCTGCATTCTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASRLGGEEQAGEFPAAAVLHSSL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAG...CACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp TGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGGCAGGGCGCCGACGATaGTCAGATACCGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CCPLTGLGHHGSFIQDLVAGRRR*SDTAAC
Trigger: GCAGGCCGCGGTATCTGACCATCGTCGGCGCCCTGC...CACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCCTCGTCCTCCTCCTaGGCCTTGTGTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GIVASAIQPPDGNVEDPASSSSS*ALCLQV
Trigger: GACTTGGAGACACAAGGCCCAGGAGGAGGACGAGGA...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
CDS-3UTR CCA 90 bp TCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGATGCACCCTGCTCATaGTGGGCTGAGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SVHKGQRVPHEVLDHGRHDAPCS*WAEAGV
Trigger: CACCCCTGCCTCAGCCCACCATGAGCAGGGTGCATC...GTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR CCA 90 bp AGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCCATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLGGEEQAGEFPAAAVSVPFRVS*GAVVGL
Trigger: CAGGCCTACCACAGCCCCCCAGGAAACTCGGAATGG...GACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp GGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGTGTCAGCTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GEFPAAAVSVHKGQRVPHVSASL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACAC...ATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR CCA 90 bp GTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAGACACCTGCATTCCTaGAGGCCAGGAAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VASAIQPPDGNVEDPASERHLHS*RPGRGC
Trigger: ACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGTCT...CTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp GAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCGGCCTCTCACCATGGTaGGCTGAGGCAGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EDPLLFQQCLCCPLTGLGGLSPW*AEAGVA
Trigger: CGCCACCCCTGCCTCAGCCCACCATGGTGAGAGGCC...GCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGAGAGGCCTCTCACCATaGTGGGCTGAGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EEDSPRWGGTRSKLGPKARGLSP*WAEAGV
Trigger: CACCCCTGCCTCAGCCCACCATGGTGAGAGGCCTCT...CGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp TGGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAACTGTCCTCAGCAGCTaGGGCACTCCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WADTCILRCGLKAWWGRATVLSS*GTPSGG
Trigger: GCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGT...TGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR TCA 90 bp CTGGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LGRHLHSSLWPQGLVGKSAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...GCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR TCA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFIAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGACTCCTCCAATGTGACTaGGGCCCAGGCAGACCATTC +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGLLQCD*GPGRPF
Trigger: GAATGGTCTGCCTGGGCCTCAGTCACATTGGAGGAG...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR TCA 90 bp GCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGHSQQHSGHSSPSTKAEGWRWL*WTQGAR
Trigger: TCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCC...CTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp AGGAAGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: RKRVSASLWPQGLVGKSRGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...CCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR GCA 90 bp CACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGAACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: HKGQRVPHEVLDHGRHGGTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...TCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTTCCAGCAGTGCCTGTaGTGTCCCCTGACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GIVASAIQPPDGNVEDPAFQQCL*CPLTGL
Trigger: TAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAA...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS-3UTR GCA 90 bp CAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGCAGTCCCTCTCAGGGTaGCCTAGGCCCACAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QGIVASAIQPPDGNVEDPQSLSG*PRPTSR
Trigger: TCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTG...CGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS-3UTR GCA 90 bp GAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGAAACCTGTCCTGCCCTaGCCTGTTCCGGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: EQAGEFPAAAVSVHKGQRKPVLP*PVPEPL
Trigger: CAAAGGTTCCGGAACAGGGCAGGGCAGGACAGGTTT...CCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGCTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: RMGMLKTRPRRSTARVKGCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...GCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAAGGATCTGCCACAAATaGCCTGGGGACAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGRICHK*PGDKGS
Trigger: GGAGCCCTTGTCCCCAGGCCATTTGTGGCAGATCCT...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp ACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACGGGAGTCCACACATCTaGGGGGTGGGAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TGLGHHGSFIQDLVNWADGSPHI*GVGAVA
Trigger: GGCCACCGCTCCCACCCCCCAGATGTGTGGACTCCC...GTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGTCCTCGTCCTCCTCCTaGGCCTTGTGTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QGIVASAIQPPDGNVEDPSSSSS*ALCLQV
Trigger: GACTTGGAGACACAAGGCCCAGGAGGAGGACGAGGA...CGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
CDS-3UTR CCA 90 bp CTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCTCAGTGCCAGGAAGGTaGGCAGGGGCTAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLCLSTRGRGCHMKCWTSVPGR*AGARLR
Trigger: CCTCAGTCTAGCCCCTGCCCACCTTCCTGGCACTGA...GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCTTTCTTTGGAGGGCCTaGCACCACTCTGGACGATGC +
Preference number: 4 (lower is better)
Translates to: AVASRLGGEEQAGEFPAAFLWRA*HHSGRC
Trigger: GCATCGTCCAGAGTGGTGCCAGGCCCTCCAAAGAAA...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCTTATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RQVSSRLPLCLSTRGRGCLFRVS*GAVVGL
Trigger: CAGGCCTACCACAGCCCCCCAGGAAACTCGGAATAA...GCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GAGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGTCCTCGTCCTCCTCCTaGGCCTGGAGGAAGGGATGC +
Preference number: 4 (lower is better)
Translates to: ERKTAQGGAGQEANWGQRSSSSS*AWRKGC
Trigger: GCATCCCTTCCTCCAGGCCCAGGAGGAGGACGAGGA...CCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCTGGGAAATGGCAGCCTaGGATGGGGCGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RGRQPKVGRDKKQTGAKGWEMAA*DGAGGE
Trigger: TTCCCCACCCGCCCCATCCCAGGCTGCCATTTCCCA...GCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGCACTGCTCCCTTCAGTaGGAAATGGCAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EQAGEFPAAAVSVHKGQRHCSLQ*EMAAWD
Trigger: ATCCCAGGCTGCCATTTCCCACTGAAGGGAGCAGTG...CCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR CCA 90 bp CGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGCGGATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RMGMLKTRPRRSTARVKGGFRVS*GAVVGL
Trigger: CAGGCCTACCACAGCCCCCCAGGAAACTCGGAATCC...GCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR TCA 90 bp TTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTCCCGAGTACCAAGGCTaGGTCAGCAGATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: FAVASRLGGEEQAGEFPAPEYQG*VSRSLS
Trigger: GGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGG...AGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp TGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACGGAGCCATGAGGCCCTaGGCTGGGGCGCACGGTATA +
Preference number: 4 (lower is better)
Translates to: CPLTGLGHHGSFIQDLVNGAMRP*AGAHGI
Trigger: TATACCGTGCGCCCCAGCTCAGGGCCTCATGGCTCC...GTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CTGGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGRHLHSSLWPQGLVGKSAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...GCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR TCA 90 bp GGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GAGHSQQHSGHSSPSTKAAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...AGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp TGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGGCAGAGGGTGCCACATaGAGTGCTGGACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: CCPLTGLGHHGSFIQDLVAEGAT*SAGPWP
Trigger: CGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGC...CACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp TCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTCTCCTATGCTCAACTaGGTCCCCCTCAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SRLPLCLSTRGRGCHMKCSPMLN*VPLRQN
Trigger: GTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGA...GCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR TCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCTCACCATGGTGGGCTaGGGCAGGGGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVLTMVG*GRGGDG
Trigger: GCCATCGCCACCCCTGCCTCAGCCCACCATGGTGAG...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: AGHSQQHSGHSSPSTKAEGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...CTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp GATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: DPLLFQQCLCCPLTGLGHGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...GTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp AGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGTCTCAGGGTCTGGGCTaGTCCTCCTTCCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: RVSASLWPQGLVGKSRQVSQGLG*SSFQEW
Trigger: CCATTCCTGGAAGGAGGAGCAGCCCAGACCCTGAGA...CACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGGCTCCTTCTCTCTCTaGTCCTCCAATGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: AVASRLGGEEQAGEFPAAGSFSL*SSNVTE
Trigger: CTCAGTCACATTGGAGGAGCAGAGAGAGAAGGAGCC...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTCCAAAGATAGGTCCCTaGTTTCCGGCCACCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPPKIGP*FPATGR
Trigger: CCTGCCGGTGGCCGGAAAGCAGGGACCTATCTTTGG...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATCATGAGGCCCTGAGCTaGGGCGCACGGTATAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHHEALS*GARYRP
Trigger: GGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCATG...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAACTGCATTCTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPDGNVEDPASEKHCQGELHSSL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGAATGCAG...TTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGTTTGCTCTAGGCGATaGAGGAAGGGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGVCSRR*RKGSGG
Trigger: GCCTCCTGAACCCTTCCTCCATCGCCTAGAGCAAAC...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp TGCAAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGCCTACATCCCTGACCTaGAGGACCCAGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CKVGQSLSGCPRPTSRCEPTSLT*RTQAFP
Trigger: GGGGAAGGCCTGGGTCCTCCAGGTCAGGGATGTAGG...CTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTCTCTGTGTCCTCACATaGCCTCTTGTCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: LPAQGIVASAIQPPDGNVLCVLT*PLVCNP
Trigger: GGGATTACAGACAAGAGGCCATGTGAGGACACAGAG...AACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTTGCGGCCTCTCTTCTTaGCTTGTAAACGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPAQGIVASAIQPPDGNVCGLSS*LVNGCF
Trigger: AAAGCAGCCGTTTACAAGCCAAGAAGAGAGGCCGCA...AACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTGGGAGTCCACACATCTaGGGGGTGGGAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVGSPHI*GVGAVA
Trigger: GGCCACCGCTCCCACCCCCCAGATGTGTGGACTCCC...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGATCTTCTCTCCAACCTaGGGAGTCCACACATCTGGG +
Preference number: 4 (lower is better)
Translates to: ASRLGGEEQAGEFPAAAVIFSPT*GVHTSG
Trigger: CCCAGATGTGTGGACTCCCCAGGTTGGAGAGAAGAT...CACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp TGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGATCTTCTCTCCAACCTaGGGAGTCCACACATCTGGG +
Preference number: 4 (lower is better)
Translates to: WPQGLVGKSRQVSSRLPLIFSPT*GVHTSG
Trigger: CCCAGATGTGTGGACTCCCCAGGTTGGAGAGAAGAT...CAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp GAGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGTCAGTGCCAGGAAGGTaGGCAGGGGCTAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: ERKTAQGGAGQEANWGQRSVPGR*AGARLR
Trigger: CCTCAGTCTAGCCCCTGCCCACCTTCCTGGCACTGA...CCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGTTTCTTTGGAGGGCCTaGCACCACTCTGGACGATGC +
Preference number: 4 (lower is better)
Translates to: EEQAGEFPAAAVSVHKGQFLWRA*HHSGRC
Trigger: GCATCGTCCAGAGTGGTGCCAGGCCCTCCAAAGAAA...CTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp AGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGCTCATCAGGTTTCTTTaGAGGGCCTGGCACCACTCT +
Preference number: 4 (lower is better)
Translates to: SRQVSSRLPLCLSTRGRGLIRFL*RAWHHS
Trigger: AGAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAG...CCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp ACACCTGCATTCCTGGAGGCCAGGAAGAGGGTGTCAGCTTCGCTGTGGCCTCAAGCACCACTGATGTCCTaGGCAGAGGGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPAFLEARKRVSASLWPQAPLMS*AEGLRA
Trigger: TGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGC...TTGAGGCCACAGCGAAGCTGACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CCAGGAAGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGTGTCAGCTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGRGCQLRCGLKAWWGRAVSASL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACAC...TGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR CCA 90 bp CCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGACACCTGCATTCCTaGAGGCCAGGAAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PSSRRMGMLKTRPRRSTARHLHS*RPGRGC
Trigger: ACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGTCT...GGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGCCCTTCAGTGGGAAATaGCAGCCTGGGATGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERPFSGK*QPGMGR
Trigger: CCGCCCCATCCCAGGCTGCCATTTCCCACTGAAGGG...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGTGGAAGCTGAGAGTCTaGGTCAAAGCCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: QGIVASAIQPPDGNVEDPWKLRV*VKARTG
Trigger: TCCAGTCCTGGCTTTGACTCAGACTCTCAGCTTCCA...CGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp GAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGTGGAAGCTGAGAGTCTaGGTCAAAGCCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: EEQAGEFPAAAVSVHKGQWKLRV*VKARTG
Trigger: TCCAGTCCTGGCTTTGACTCAGACTCTCAGCTTCCA...CTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp CAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGTCAGGACTTGGAAGCTaGGAGTCTGAGTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QAGEFPAAAVSVHKGQRVSGLGS*ESESKP
Trigger: TGGCTTTGACTCAGACTCTCAGCTTCCAAGTCCTGA...CACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp GGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCAGGACTTGGAAGCTaGGAGTCTGAGTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GIVASAIQPPDGNVEDPASGLGS*ESESKP
Trigger: TGGCTTTGACTCAGACTCTCAGCTTCCAAGTCCTGA...GGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATGTGGAAGGCTCTAGGTaGGCATGGGGTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHVEGSR*AWGGVS
Trigger: GGAGACCCCACCCCATGCTCACCTAGAGCCTTCCAC...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp GTAAGTGGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCACTGTCCTCAGCAGCTaGGGCACTCCCAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VSGAGHSQQHSGHSSPSTTVLSS*GTPSGG
Trigger: TCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGT...GGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCCACTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR GCA 90 bp GGTCACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTCAGCAGGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GHSSPSTKAESADHCPQQASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...CTGCTGAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR GCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATGGGTGCCACATGAAGTaGTGGACCATGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHGCHMK*WTMAAT
Trigger: CGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCC...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCTTCCAGCAGTGCCTGTaGTGTCCCCTGACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: AVPAVPVLSPDWSRPPRFFQQCL*CPLTGL
Trigger: TAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAA...GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCTGTGAGAGGATCCTTTaGTGTTCCAGCAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GKSRQVSSRLPLCLSTRGCERIL*CSSSAC
Trigger: ACAGGCACTGCTGGAACAGCAAAGGATCCTCTCACA...GCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS-3UTR GCA 90 bp GGTCACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTCAGCAGAGGAGTCCTCCTCAGTaGCAGGAAGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GHSSPSTKAESADHCPQQRSPPQ*QEGGQG
Trigger: CCCCTGCCCACCTTCCTGGCACTGAGGAGGACTCCT...CTGCTGAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481426.6
CDS-3UTR CCA 90 bp TGGGCCTCCAGGCAGGCTTTCCCCATTAATGCTGCTTGTGGGCACTGGGAAAGGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WASRQAFPINAACGHWERLRHSQ*GLQREE
Trigger: CTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAG...CCTTTCCCAGTGCCCACAAGCAGCATTAATGGGGAAAGCCTGCCTGGAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651736.1
CDS-3UTR CCA 90 bp GAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: EQGTLNSIAVTVPRVPRLCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...CAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACTGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DPLLFQQCLCCPLTGLGHCGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...GTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTC +
Preference number: 4 (lower is better)
Translates to: CCPLTGLGHHGSFIQDLVVLSPD*SRPPRF
Trigger: GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCAC...CACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGTGTAAAATTGATGCCTaGGCGCAGGGCGCCGACGAT +
Preference number: 4 (lower is better)
Translates to: RVSASLWPQGLVGKSRQVCKIDA*AQGADD
Trigger: ATCGTCGGCGCCCTGCGCCCAGGCATCAATTTTACA...CACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCGCAGGAAGGAAGGGCTaGGAGCATCTTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LPLCLSTRGRGCHMKCWTAGRKG*EHLLSN
Trigger: GTTGGAGAGAAGATGCTCCCAGCCCTTCCTTCCTGC...GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000651962.1
CDS-3UTR CCA 90 bp CCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCTCAGTGCCAGGAAGGTaGGCAGGGGCTAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: PDWSRPPRFLHPGPSELGSVPGR*AGARLR
Trigger: CCTCAGTCTAGCCCCTGCCCACCTTCCTGGCACTGA...GCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCTCAGCAGCTGAGGCACTCCCAGTGGGGGCTACAGAGGGAAGAGACGATTTCGGCCTGGCACCACTCTaGACGATGCACCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSAAEALPVGATEGRDDFGLAPL*TMHPAH
Trigger: ATGAGCAGGGTGCATCGTCCAGAGTGGTGCCAGGCC...GAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGCTGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp GCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGGGCCTGGCACCACTCTaGACGATGCACCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: AGHSQQHSGHSSPSTKAEGLAPL*TMHPAH
Trigger: ATGAGCAGGGTGCATCGTCCAGAGTGGTGCCAGGCC...CTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp CCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAATTTCTTTGGAGGGCCTaGCACCACTCTGGACGATGC +
Preference number: 4 (lower is better)
Translates to: PPDGNVEDPASEKHCQGEFLWRA*HHSGRC
Trigger: GCATCGTCCAGAGTGGTGCCAGGCCCTCCAAAGAAA...TTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp CACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGACTCATCAGGTTTCTTTaGAGGGCCTGGCACCACTCT +
Preference number: 4 (lower is better)
Translates to: HKGQRVPHEVLDHGRHGGLIRFL*RAWHHS
Trigger: AGAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAG...TCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCAGTCAAAGCCAGGACTaGATCCGGCTCACATTCCAA +
Preference number: 4 (lower is better)
Translates to: AVASRLGGEEQAGEFPAASQSQD*IRLTFQ
Trigger: TTGGAATGTGAGCCGGATCCAGTCCTGGCTTTGACT...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGCACCACTGATGTCCTaGGCAGAGGGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELAPLMS*AEGLRA
Trigger: TGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGC...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GGTCACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTCAGCAGGGCCTGGCACCACTCTaGACGATGCACCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GHSSPSTKAESADHCPQQGLAPL*TMHPAL
Trigger: GAGAGCAGGGTGCATCGTCCAGAGTGGTGCCAGGCC...CTGCTGAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481426.6
CDS-3UTR CCA 90 bp CTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAAGGCCTGGCACCACTCTaGACGATGCACCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSPDWSRPPRFLHPGPSEGLAPL*TMHPAL
Trigger: GAGAGCAGGGTGCATCGTCCAGAGTGGTGCCAGGCC...TTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACTTATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SVHKGQRVPHEVLDHGRHLFRVS*GAVVGL
Trigger: CAGGCCTACCACAGCCCCCCAGGAAACTCGGAATAA...GTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCGTGTGTACTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFIVCTSL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGTACACAC...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTACTTCGCTGTGGCCTCAAGTGGGAAATGGCAGCCTaGGATGGGGCGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GQEANWGQRRCVLRCGLKWEMAA*DGAGGE
Trigger: TTCCCCACCCGCCCCATCCCAGGCTGCCATTTCCCA...CTTGAGGCCACAGCGAAGTACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR TCA 90 bp GAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCCCGAGTACCAAGGCTaGGTCAGCAGATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: EDPLLFQQCLCCPLTGLGPEYQG*VSRSLS
Trigger: GGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGG...GCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAAGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSPDWSRPPRFLHPGPSEAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...TTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp TCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTCAGGACTTGGAAGCTaGGAGTCTGAGTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SRLPLCLSTRGRGCHMKCSGLGS*ESESKP
Trigger: TGGCTTTGACTCAGACTCTCAGCTTCCAAGTCCTGA...GCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR TCA 90 bp TCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTGTGGAAGGCTCTAGGTaGGCATGGGGTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLSGCPRPTSRCERILCCVEGSR*AWGGVS
Trigger: GGAGACCCCACCCCATGCTCACCTAGAGCCTTCCAC...ACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp TCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTGCCTCGGAGAAGCACTaGCAGGGTGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLSGCPRPTSRCERILCCASEKH*QGEGLG
Trigger: TCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGC...ACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp TGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: CCPLTGLGHHGSFIQDLVTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...CACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: EQGTLNSIAVTVPRVPRLTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...CAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR GCA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGCAGTCCCTCTCAGGGTaGCCTAGGCCCACAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERQSLSG*PRPTSR
Trigger: TCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTG...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCAGTCCCTCTCAGGGTaGCCTAGGCCCACAAGTAGA +
Preference number: 4 (lower is better)
Translates to: DPLLFQQCLCCPLTGLGHQSLSG*PRPTSR
Trigger: TCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTG...GTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCAAGGAGTCCTCCTCAGTaGCAGGAAGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGALGPQVDVRGSFAVPARSPPQ*QEGGQG
Trigger: CCCCTGCCCACCTTCCTGGCACTGAGGAGGACTCCT...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp TGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACCACCACTCTGGACGATaGACCCTGCTCATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CPLTGLGHHGSFIQDLVNHHSGR*TLLMVG
Trigger: GCCCACCATGAGCAGGGTGCATCGTCCAGAGTGGTG...GTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp CAGGGCACTCAATCAGGCATGCGGAGCCGAGGACCCAGGGTGCAGTTATTTATGCACCACTCTGGACGATaGACCCTGCTCATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QGTQSGMRSRGPRVQLFMHHSGR*TLLMVG
Trigger: GCCCACCATGAGCAGGGTGCATCGTCCAGAGTGGTG...CATAAATAACTGCACCCTGGGTCCTCGGCTCCGCATGCCTGATTGAGTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR GCA 90 bp TGGGCCTCCAGGCAGGCTTTCCCCATTAATGCTGCTTGTGGGCACTGGGAAAGGCACCGGCAGGCTCACTaGTCCCTTCAGTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: WASRQAFPINAACGHWERHRQAH*SLQWEM
Trigger: CATTTCCCACTGAAGGGAGCAGTGAGCCTGCCGGTG...CCTTTCCCAGTGCCCACAAGCAGCATTAATGGGGAAAGCCTGCCTGGAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELLRHSQ*GLQREE
Trigger: CTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAG...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
CDS-3UTR CCA 90 bp GGTCACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTCAGCAGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GHSSPSTKAESADHCPQQLRHSQ*GLQREE
Trigger: CTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAG...CTGCTGAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GGACCTAGTGAACTGGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAGGCTTGTGTGGCCTCAAGGCTTaGTGGGGAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPSELGRHLHSSLWPQGLCGLKA*WGRAGR
Trigger: CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACA...CAAGCCTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GACCTAGTGAACTGGGCAGACACCTGCATTCTTCGCTGTGGCCTCAAGGCTTGGGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTC +
Preference number: 4 (lower is better)
Translates to: DLVNWADTCILRCGLKAWVLSPD*SRPPRF
Trigger: GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCAC...CCAAGCCTTGAGGCCACAGCGAAGAATGCAGGTGTCTGCCCAGTTCACTAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GTAAGTGGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTC +
Preference number: 4 (lower is better)
Translates to: VSGAGHSQQHSGHSSPSTVLSPD*SRPPRF
Trigger: GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCAC...GGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCCACTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477170.5
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGTCCAGTCTCAGGGTCTaGGCTGCTCCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELSSLRV*AAPPSR
Trigger: CCTGGAAGGAGGAGCAGCCCAGACCCTGAGACTGGA...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp ACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTAGCAGGAAGGAAGGGCTaGGAGCATCTTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TAQGGAGQEANWGQRRCVAGRKG*EHLLSN
Trigger: GTTGGAGAGAAGATGCTCCCAGCCCTTCCTTCCTGC...TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGTCAGTGCCAGGAAGGTaGGCAGGGGCTAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRSVPGR*AGARLR
Trigger: CCTCAGTCTAGCCCCTGCCCACCTTCCTGGCACTGA...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGAGTCAAAGCCAGGACTaGATCCGGCTCACATTCCAA +
Preference number: 4 (lower is better)
Translates to: QGIVASAIQPPDGNVEDPSQSQD*IRLTFQ
Trigger: TTGGAATGTGAGCCGGATCCAGTCCTGGCTTTGACT...CGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp CATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTGCACCACTGATGTCCTaGGCAGAGGGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSGHSSPSTKAESADHCPAPLMS*AEGLRA
Trigger: TGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGC...AGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCAGCACCACTGATGTCCTaGGCAGAGGGCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGALGPQVDVRGSFAVPAAPLMS*AEGLRA
Trigger: TGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGC...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATCCATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHPFRVS*GAVVGL
Trigger: CAGGCCTACCACAGCCCCCCAGGAAACTCGGAATGG...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000651736.1
CDS-3UTR CCA 90 bp ACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTAGAAGACAGCCCAAGGTaGGGCGGGACAAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: TAQGGAGQEANWGQRRCVEDSPR*GGTRSK
Trigger: TTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTC...TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCGAAGACAGCCCAAGGTaGGGCGGGACAAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFIEDSPR*GGTRSK
Trigger: TTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTC...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTCAACAGAGAGGGCAGTaGAAGGCTCTAGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FAVASRLGGEEQAGEFPAQQRGQ*KALGEH
Trigger: ATGCTCACCTAGAGCCTTCCACTGCCCTCTCTGTTG...AGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR CCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCCTTCAGTGGGAAATaGCAGCCTGGGATGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVPFSGK*QPGMGR
Trigger: CCGCCCCATCCCAGGCTGCCATTTCCCACTGAAGGG...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp ACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTACACTGCTCCCTTCAGTaGGAAATGGCAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TAQGGAGQEANWGQRRCVHCSLQ*EMAAWD
Trigger: ATCCCAGGCTGCCATTTCCCACTGAAGGGAGCAGTG...TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp GCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCCTAAAACCCTTGAGTaGCTCCTCATGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AAAVSVHKGQRVPHEVLDPKTLE*LLMAPS
Trigger: AGAAGGAGCCATGAGGAGTCACTCAAGGGTTTTAGG...GTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGACAAGGGGCAGAGGGTaGCACATGAAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELTRGRG*HMKCWT
Trigger: GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTTCCAGCAGTGCCTGTaGTGTCCCCTGACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GQSLSGCPRPTSRCERILFQQCL*CPLTGL
Trigger: TAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAA...AAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGTTGCTGTTCCAGCAGTaGCTGTGCTGTCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERLLFQQ*LCCPLT
Trigger: AGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAA...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GTGGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGTTGCTGTTCCAGCAGTaGCTGTGCTGTCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: VEQGTLNSIAVTVPRVPRLLFQQ*LCCPLT
Trigger: AGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAA...CCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000651962.1
CDS-3UTR GCA 90 bp CCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTTTGAATGTGAACTTGTaGAAGGTAGGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PPSSRRMGMLKTRPRRSTLNVNL*KVGQSL
Trigger: GAGGGACTGGCCTACCTTGCACAAGTTCACATTCAA...AGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS-3UTR GCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGTCAGATACCGCGGCCTaGACACCCTGGGACCTACAT +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELSDTAA*TPWDLH
Trigger: ATGTAGGTCCCAGGGTGTGCAGGCCGCGGTATCTGA...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTCTCAAACCTGTCCTaGCCTGCCCTGTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHLSNLS*PALFRN
Trigger: GTTCCGGAACAGGGCAGGGCAGGACAGGTTTGAGAG...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGCTGGACGATGCACCCTaGTCTCGCCTCCCAAAGATA +
Preference number: 4 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWLDDAP*SRLPKI
Trigger: TATCTTTGGGAGGCGAGAGCAGGGTGCATCGTCCAG...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTCTGGACGATGCACCCTaGTCTCGCCTCCCAAAGATA +
Preference number: 4 (lower is better)
Translates to: GQSLSGCPRPTSRCERILLDDAP*SRLPKI
Trigger: TATCTTTGGGAGGCGAGAGCAGGGTGCATCGTCCAG...AAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCGCCGAGGACCCAGGGTaGAGTTATTTATGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LPLCLSTRGRGCHMKCWTAEDPG*SYLCSH
Trigger: ATGGGAACATAAATAACTGCACCCTGGGTCCTCGGC...GGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp GTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGACCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 4 (lower is better)
Translates to: VHKGQRVPHEVLDHGRHGPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...TCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVCHMKC*TMAATE
Trigger: CTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCA...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTGTGCTGTCCCCTGACTaGTCTAGGCCACCACGGTTC +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVVLSPD*SRPPRF
Trigger: GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCAC...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTTCCTCCTTCCAGGAATaGGAGTTTGCTCTAGGCGAT +
Preference number: 4 (lower is better)
Translates to: FAVASRLGGEEQAGEFPASSFQE*EFALGD
Trigger: ATCGCCTAGAGCAAACTCCCATTCCTGGAAGGAGGA...AGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp GCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCTTGAGTGACTCCTCATaGCTCCTTCTCTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AVPAVPVLSPDWSRPPRFLSDSS*LLLSLL
Trigger: GAGCAGAGAGAGAAGGAGCCATGAGGAGTCACTCAA...GAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp GCTGAGGCACTCCCAGTGGGGGCTACAGAGGGAAGAGACGATTTCCTTCCTTCTTCCTCGTCCTCCTCCTaGGCCTTGTGTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: AEALPVGATEGRDDFLPSSSSSS*ALCLQV
Trigger: GACTTGGAGACACAAGGCCCAGGAGGAGGACGAGGA...AGAAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGTTTCTTTGGAGGGCCTaGCACCACTCTGGACGATGC +
Preference number: 4 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWFLWRA*HHSGRC
Trigger: GCATCGTCCAGAGTGGTGCCAGGCCCTCCAAAGAAA...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCTCATCAGGTTTCTTTaGAGGGCCTGGCACCACTCT +
Preference number: 4 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFILIRFL*RAWHHS
Trigger: AGAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAG...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGCAGTCAAAGCCAGGACTaGATCCGGCTCACATTCCAA +
Preference number: 4 (lower is better)
Translates to: RMGMLKTRPRRSTARVKGSQSQD*IRLTFQ
Trigger: TTGGAATGTGAGCCGGATCCAGTCCTGGCTTTGACT...GCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACGTGTGTACTTCGCTGTaGCCTCAAGGCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHVCTSL*PQGLVG
Trigger: CCCCACCAAGCCTTGAGGCCACAGCGAAGTACACAC...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTCAACAGAGAGGGCAGTaGAAGGCTCTAGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPQQRGQ*KALGEH
Trigger: ATGCTCACCTAGAGCCTTCCACTGCCCTCTCTGTTG...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGTCCTCCTCCTGGGCCTaGAGGAAGGGATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELSSSWA*RKGCLC
Trigger: ACACAAGCATCCCTTCCTCCAGGCCCAGGAGGAGGA...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp AGCCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGCCAAGAGGGCATTCTTaGCTCTGCCATGTAAAATTG +
Preference number: 4 (lower is better)
Translates to: SRRMGMLKTRPRRSTARVPRGHS*LCHVKL
Trigger: CAATTTTACATGGCAGAGTCAAGAATGCCCTCTTGG...CACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR TCA 90 bp GAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCTGGAAGCTGAGAGTCTaGGTCAAAGCCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: EDPLLFQQCLCCPLTGLGWKLRV*VKARTG
Trigger: TCCAGTCCTGGCTTTGACTCAGACTCTCAGCTTCCA...GCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGTTGCTGTTCCAGCAGTaGCTGTGCTGTCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRLLFQQ*LCCPLT
Trigger: AGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAA...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp GTCACAGTTCCCCGAGTACCAAGGCTGAGTCAGCAGATCACTGTCCTCAGCAGCTTGCTGTTCCAGCAGTaGCTGTGCTGTCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: VTVPRVPRLSQQITVLSSLLFQQ*LCCPLT
Trigger: AGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAA...GCTGCTGAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477170.5
CDS-3UTR GCA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCACAGTCCCTCTCAGGGTaGCCTAGGCCCACAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QGALGPQVDVRGSFAVPAQSLSG*PRPTSR
Trigger: TCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTG...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCTGGACGATGCACCCTaGTCTCGCCTCCCAAAGATA +
Preference number: 4 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRLDDAP*SRLPKI
Trigger: TATCTTTGGGAGGCGAGAGCAGGGTGCATCGTCCAG...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GTTCCCATCTCCTATGCTCAACTGAGTCCCCCTCAGGCAGAACAAAGTGGTGTCCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VPISYAQLSPPQAEQSGVLRHSQ*GLQREE
Trigger: CTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAG...GACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp TTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 4 (lower is better)
Translates to: FAVASRLGGEEQAGEFPAPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...AGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp CGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGGGCCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 4 (lower is better)
Translates to: RMGMLKTRPRRSTARVKGPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...GCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CCA 90 bp GGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTATCTTCTCTCCAACCTaGGGAGTCCACACATCTGGG +
Preference number: 4 (lower is better)
Translates to: GQSLSGCPRPTSRCERILIFSPT*GVHTSG
Trigger: CCCAGATGTGTGGACTCCCCAGGTTGGAGAGAAGAT...AAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGCAGGAAGGAAGGGCTaGGAGCATCTTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELAGRKG*EHLLSN
Trigger: GTTGGAGAGAAGATGCTCCCAGCCCTTCCTTCCTGC...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGAGACACCTGCATTCCTaGAGGCCAGGAAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRRHLHS*RPGRGC
Trigger: ACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGTCT...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACAGACACCTGCATTCCTaGAGGCCAGGAAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CPLTGLGHHGSFIQDLVNRHLHS*RPGRGC
Trigger: ACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGTCT...GTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCCAGGACCTAGTGAACTaGGCAGACACCTGCATTCCT +
Preference number: 4 (lower is better)
Translates to: PDWSRPPRFLHPGPSELGQDLVN*ADTCIP
Trigger: AGGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...GCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGCAGGACCTAGTGAACTaGGCAGACACCTGCATTCCT +
Preference number: 4 (lower is better)
Translates to: CCPLTGLGHHGSFIQDLVQDLVN*ADTCIP
Trigger: AGGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...CACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCTCCTCCTGGGCCTaGAGGAAGGGATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLSGCPRPTSRCERILCCSSSWA*RKGCLC
Trigger: ACACAAGCATCCCTTCCTCCAGGCCCAGGAGGAGGA...ACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTCTGAGGCACTCCCAGTaGGGGATTCCGAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSGCPRPTSRCERILCCLRHSQ*GIPSFL
Trigger: CAGGAAACTCGGAATCCCCCACTGGGAGTGCCTCAG...ACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651962.1
CDS-3UTR TCA 90 bp TCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGTGGAAGCTGAGAGTCTaGGTCAAAGCCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: SRPPRFLHPGPSELGRHLWKLRV*VKARTG
Trigger: TCCAGTCCTGGCTTTGACTCAGACTCTCAGCTTCCA...CAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp TCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTTCCAGCAGTGCCTGTaGTGTCCCCTGACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: SLSGCPRPTSRCERILCCFQQCL*CPLTGL
Trigger: TAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAA...ACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CAGTCACTCAGAAACATGCCAGGGCACTCAATCAGGCATGCGGAGCCGAGGACCTGTTCCCATCTCCTATaGTCAACTGAGTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QSLRNMPGHSIRHAEPRTCSHLL*STESPS
Trigger: TGAGGGGGACTCAGTTGAGCATAGGAGATGGGAACA...GGTCCTCGGCTCCGCATGCCTGATTGAGTGCCCTGGCATGTTTCTGAGTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR GCA 90 bp ACACCTGCATTCCTGGAGGCCAGGAAGAGGGTGTCAGCTTCGCTGTGGCCTCAAAGTCACTCAGAAACATaGCAGGGCACTCAATCAGGC +
Preference number: 4 (lower is better)
Translates to: TPAFLEARKRVSASLWPQSHSET*QGTQSG
Trigger: GCCTGATTGAGTGCCCTGGCATGTTTCTGAGTGACT...TTGAGGCCACAGCGAAGCTGACACCCTCTTCCTGGCCTCCAGGAATGCAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp ACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGTGTGTACCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 4 (lower is better)
Translates to: TAQGGAGQEANWGQRRCVPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCATTTCTTTGGAGGGCCTaGCACCACTCTGGACGATGC +
Preference number: 4 (lower is better)
Translates to: QGALGPQVDVRGSFAVPAFLWRA*HHSGRC
Trigger: GCATCGTCCAGAGTGGTGCCAGGCCCTCCAAAGAAA...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACCTCATCAGGTTTCTTTaGAGGGCCTGGCACCACTCT +
Preference number: 4 (lower is better)
Translates to: CPLTGLGHHGSFIQDLVNLIRFL*RAWHHS
Trigger: AGAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAG...GTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCAGGACCTAGTGAACTaGGCAGACACCTGCATTCCT +
Preference number: 4 (lower is better)
Translates to: SRPPRFLHPGPSELGRHLQDLVN*ADTCIP
Trigger: AGGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...CAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGAGGATCCTTTGCTGTTCCAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGGGACAAGAAGCAAACTaGGGCCAAAGGCGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RGSFAVPAVPVLSPDWSRGQEAN*GQRRCV
Trigger: TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCC...CCTAGACCAGTCAGGGGACAGCACAGGCACTGCTGGAACAGCAAAGGATCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATGGACAAGAAGCAAACTaGGGCCAAAGGCGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RPPRFLHPGPSELGRHLHGQEAN*GQRRCV
Trigger: TACACACCGCCTTTGGCCCCAGTTTGCTTCTTGTCC...ATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR TCA 90 bp AGGACCCAGGGTGCAGTTATTTATGTTCCCATCTCCTATGCTCAACTGAGTCCCGCCGGATGGGAATGTTaGAGACCCGGCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: RTQGAVIYVPISYAQLSPAGWEC*RPGLGE
Trigger: TTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGC...GGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCAGGACCTAGTGAACTaGGCAGACACCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHQDLVN*ADTCIL
Trigger: AAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GTAAGTGGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCCAGGACCTAGTGAACTaGGCAGACACCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: VSGAGHSQQHSGHSSPSTQDLVN*ADTCIL
Trigger: AAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...GGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCCACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CCA 90 bp GTTCCCATCTCCTATGCTCAACTGAGTCCCCCTCAGGCAGAACAAAGTGGTGTCGCAGGAAGGAAGGGCTaGGAGCATCTTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VPISYAQLSPPQAEQSGVAGRKG*EHLLSN
Trigger: GTTGGAGAGAAGATGCTCCCAGCCCTTCCTTCCTGC...GACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp ACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACAGTCAAAGCCAGGACTaGATCCGGCTCACATTCCAA +
Preference number: 4 (lower is better)
Translates to: TGLGHHGSFIQDLVNWADSQSQD*IRLTFQ
Trigger: TTGGAATGTGAGCCGGATCCAGTCCTGGCTTTGACT...GTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp GGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTAGACGATTTCCTTCCTaGATCCGGCTCACATTCCAA +
Preference number: 4 (lower is better)
Translates to: GAGHSQQHSGHSSPSTKARRFPS*IRLTFQ
Trigger: TTGGAATGTGAGCCGGATCCAGGAAGGAAATCGTCT...AGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR GCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTTGTGAGAGGATCCTTTaGTGTTCCAGCAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVCERIL*CSSSAC
Trigger: ACAGGCACTGCTGGAACAGCAAAGGATCCTCTCACA...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCATGTGAGAGGATCCTTTaGTGTTCCAGCAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QGALGPQVDVRGSFAVPACERIL*CSSSAC
Trigger: ACAGGCACTGCTGGAACAGCAAAGGATCCTCTCACA...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAATTGAATGTGAACTTGTaGAAGGTAGGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSPDWSRPPRFLHPGPSELNVNL*KVGQSL
Trigger: GAGGGACTGGCCTACCTTGCACAAGTTCACATTCAA...TTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp ACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACTTGAATGTGAACTTGTaGAAGGTAGGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TGLGHHGSFIQDLVNWADLNVNL*KVGQSL
Trigger: GAGGGACTGGCCTACCTTGCACAAGTTCACATTCAA...GTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp AGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGATTGTTCCCATCATTTaGATCTCTGTTCTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RGCQLRCGLKAWWGRAGRIVPII*ISVLEL
Trigger: TAGCTCCAGAACAGAGATGCAAATGATGGGAACAAT...CCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR GCA 90 bp ATTTATGTTCCCATCTCCTATGCTCAACTGAGTCCCCCTCAGGCAGAACAAAGTAGGAGTCCTCCTCAGTaGCAGGAAGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IYVPISYAQLSPPQAEQSRSPPQ*QEGGQG
Trigger: CCCCTGCCCACCTTCCTGGCACTGAGGAGGACTCCT...ACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAACATAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR CCA 90 bp TTTGTAAGTGGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTTCAGGCAGAACAAAGTaGTGTCCCTGTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FVSGAGHSQQHSGHSSPSSGRTK*CPCLSS
Trigger: GCTGCTGAGACAGGGACACCACTTTGTTCTGCCTGA...ACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCCACTTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR GCA 90 bp TTTGTAAGTGGAGCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTTGTGAGAGGATCCTTTaGTGTTCCAGCAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FVSGAGHSQQHSGHSSPSCERIL*CSSSAC
Trigger: ACAGGCACTGCTGGAACAGCAAAGGATCCTCTCACA...ACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGCTCCACTTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000651962.1
CDS-3UTR GCA 90 bp CCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATTCTTCGTTGAATGTGAACTTGTaGAAGGTAGGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PRFLHPGPSELGRHLHSSLNVNL*KVGQSL
Trigger: GAGGGACTGGCCTACCTTGCACAAGTTCACATTCAA...CGAAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477170.5
CDS-3UTR GCA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGTTTAGAGGCAGCATCTaGTGTTCCATTCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELFRGSI*CSIPSF
Trigger: GAAACTCGGAATGGAACAGCAGATGCTGCCTCTAAA...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000651736.1
CDS-3UTR CCA 90 bp CCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCATCCTTTTGTAAGTaGAGCAGGGCACTCTCAACA +
Preference number: 4 (lower is better)
Translates to: PSQGALGPQVDVRGSFAVPSFCK*SRALST
Trigger: TGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGG...AACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp CCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGAGTCTAAGATCAAGGTaGCATAAAGGTTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: PLTGLGHHGSFIQDLVNWSLRSR*HKGWFV
Trigger: CACAAACCAACCTTTATGGCACCTTGATCTTAGACT...CCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CCA 90 bp TGTTTATTGAATGTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTGCCCTATCTTCTCTCCAACCTaGGGAGTCCACACATCTGGG +
Preference number: 4 (lower is better)
Translates to: CLLNVNLCKVGQSLSGCPIFSPT*GVHTSG
Trigger: CCCAGATGTGTGGACTCCCCAGGTTGGAGAGAAGAT...AGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCACATTCAATAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp TGTTTATTGAATGTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTGCCCTCTCATCAGGTTTCTTTaGAGGGCCTGGCACCACTCT +
Preference number: 4 (lower is better)
Translates to: CLLNVNLCKVGQSLSGCPLIRFL*RAWHHS
Trigger: AGAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAG...AGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCACATTCAATAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CCA 90 bp AGGACCCAGGGTGCAGTTATTTATGTTCCCATCTCCTATGCTCAACTGAGTCCCCAGGACCTAGTGAACTaGGCAGACACCTGCATTCCT +
Preference number: 4 (lower is better)
Translates to: RTQGAVIYVPISYAQLSPQDLVN*ADTCIP
Trigger: AGGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTG...GGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481395.7
CDS-3UTR TCA 90 bp TGTTTATTGAATGTGAACTTGTGCAAGGTAGGCCAGTCCCTCTCAGGGTGCCCTTCAGGACTTGGAAGCTaGGAGTCTGAGTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: CLLNVNLCKVGQSLSGCPSGLGS*ESESKP
Trigger: TGGCTTTGACTCAGACTCTCAGCTTCCAAGTCCTGA...AGGGCACCCTGAGAGGGACTGGCCTACCTTGCACAAGTTCACATTCAATAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR GCA 90 bp TTTCCTTCCTTCTTTAGAGGCAGCATCTGCTGTTCCATTCCGAGTTTCCTGGGGTTTAGAGGCAGCATCTaGTGTTCCATTCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FPSFFRGSICCSIPSFLGFRGSI*CSIPSF
Trigger: GAAACTCGGAATGGAACAGCAGATGCTGCCTCTAAA...CCCCAGGAAACTCGGAATGGAACAGCAGATGCTGCCTCTAAAGAAGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 90 bp GTCAGATACCGCGGCCTGCACACCCTGGGACCTACATCCCTGACCTaGAGGACCCAGGCCTTCCCCGGGCTTCACCACGAGTCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: VRYRGLHTLGPTSLT*RTQAFPGLHHESCR
Trigger: CCGGCAGGACTCGTGGTGAAGCCCGGGGAAGGCCTGGGTCCTCCAGGTCAGGGATGTAGGTCCCAGGGTGTGCAGGCCGCGGTATCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp GCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: ASRLGGEEQAGEFPAAAVGVAMA*MDPGGQ
Trigger: CTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCC...CACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CAA 90 bp ACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGAGGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: TRGRGCHMKCWTMAATEEGVAMA*MDPGGQ
Trigger: CTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCC...CTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CAA 90 bp CACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGAGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: HKGQRVPHEVLDHGRHGGGVAMA*MDPGGQ
Trigger: CTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCC...TCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS TCA 90 bp CGATGGTCAGATACCGCGGCCTGCACACCCTGGGACCTACATCCCTaGCCTGGAGGACCCAGGCCTTCCCCGGGCTTCACCACGAGTCCT +
Preference number: 5 (lower is better)
Translates to: RWSDTAACTPWDLHP*PGGPRPSPGFTTSP
Trigger: AGGACTCGTGGTGAAGCCCGGGGAAGGCCTGGGTCCTCCAGGTCAGGGATGTAGGTCCCAGGGTGTGCAGGCCGCGGTATCTGACCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS GCA 90 bp CTGACCTGGAGGACCCAGGCCTTCCCCGGGCTTCACCACGAGTCCTaGCGGCCACACAGGGACCCTAACAGACCTAGTCCAGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LTWRTQAFPGLHHES*RPHRDPNRPSPVSG
Trigger: CCCTGAGACTGGACTAGGTCTGTTAGGGTCCCTGTGTGGCCGGCAGGACTCGTGGTGAAGCCCGGGGAAGGCCTGGGTCCTCCAGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp CAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: QAGEFPAAAVSVHKGQRVRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...CACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CAA 90 bp TGCCCTCCCGGCCCAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAACTCTGCCTAAAACCCTaGAGTGACTCCTCATGGCTC +
Preference number: 5 (lower is better)
Translates to: CPPGPGHSGVRHPAAGWELCLKP*SDSSWL
Trigger: GAGCCATGAGGAGTCACTCAAGGGTTTTAGGCAGAG...TTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTGGGCCGGGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp AGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RGRQPKVGRDKKQTGAKGGVAMA*MDPGGQ
Trigger: CTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCC...GCCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFIGVAMA*MDPGGQ
Trigger: CTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCC...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS GCA 90 bp CACCCTTCAGCCCAAGAGGGTTCCTGGGTAAGGACTCTCAGGCTCTaGTCCCGGAACCTCTCCCTACAGCCTGCTCCCAGCCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HPSAQEGSWVRTLRL*SRNLSLQPAPSPSS
Trigger: TGAGGAGGGGCTGGGAGCAGGCTGTAGGGAGAGGTTCCGGGAGCAGAGCCTGAGAGTCCTTACCCAGGAACCCTCTTGGGCTGAAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS-3UTR CAA 90 bp AGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGGTGCGCCGAAATCGCGCCATaGCTCTCAAACCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RQVSSRLPLCLSTRGRGCAEIAP*LSNLSC
Trigger: GCAGGACAGGTTTGAGAGCAATGGCGCGATTTCGGC...GCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp GGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCCCTCATCAGGTTTCTTaGGAGGGCCTGGCACCACTC +
Preference number: 5 (lower is better)
Translates to: GLVGKSRQVSSRLPLCLSPHQVS*EGLAPL
Trigger: GAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAGG...GGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS TCA 90 bp ATGCACCCTGCTCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGAGTGATCCAGGTACAAGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: MHPAHGGLRQGWRWL*WTQGARVIQVQGVL
Trigger: GAGGACTCCTTGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGAGCAGGGTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS GCA 90 bp ACTCTGGACGATGCACCCTGCTCTCGCCTCCCAAAGATAGGTCCCTaGTTTCCGGCCACCGGCAGGCTCACTGCTCCCTTCAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: TLDDAPCSRLPKIGP*FPATGRLTAPFSMV
Trigger: CACCATGCTGAAGGGAGCAGTGAGCCTGCCGGTGGCCGGAAAGCAGGGACCTATCTTTGGGAGGCGAGAGCAGGGTGCATCGTCCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000488219.2
CDS CCA 90 bp CCCACTGAGCTTGTCCATGGCAGAGGCAGAGGAGCTTTGCCTCCCTaGAGCCCAGGATCTGCCACAAATGGCCTGGGGACAAGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PTELVHGRGRGALPP*SPGSATNGLGTRAP
Trigger: TGGAGCCCTTGTCCCCAGGCCATTTGTGGCAGATCCTGGGCTCCAGGGAGGCAAAGCTCCTCTGCCTCTGCCATGGACAAGCTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000488657.3
CDS-3UTR CAA 90 bp AGGAAGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: RKRVSASLWPQGLVGKSRRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...CCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR CAA 90 bp CCAGGAAGAGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAAGAGGCAGAGGAGCTTaGCCTCCCTGGAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PGRGCQLRCGLKAWWGRARGRGA*PPWSPG
Trigger: TCCTGGGCTCCAGGGAGGCAAAGCTCCTCTGCCTCT...TGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCTCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp TTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTCTGCTCCCACTGAGCTaGTCCATGGCAGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: FAVASRLGGEEQAGEFPALLPLS*SMAEAE
Trigger: CTCTGCCTCTGCCATGGACAAGCTCAGTGGGAGCAG...AGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000651962.1
CDS GCA 90 bp CCAGTCTCAGGGTCTGGGCTGCTCCTCCTTCCAGGAATGGGAGTTTaGTCTAGGCGATGGAGGAAGGGTTCAGGAGGCCACTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PVSGSGLLLLPGMGV*SRRWRKGSGGHSAC
Trigger: GCAGGCAGAGTGGCCTCCTGAACCCTTCCTCCATCGCCTAGAGCAAACTCCCATTCCTGGAAGGAGGAGCAGCCCAGACCCTGAGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS GCA 90 bp TCTGGGGCACGGCGGGGTGCCGCACACGTGTGTTCAATGTGTTCTTaGAGTGGTGCACCCTTCAGCCCAAGAGGGTTCCTGGGTAAGGAC +
Preference number: 5 (lower is better)
Translates to: SGARRGAAHVCSMCS*SGAPFSPRGFLGKD
Trigger: GTCCTTACCCAGGAACCCTCTTGGGCTGAAGGGTGCACCACTGCAAGAACACATTGAACACACGTGTGCGGCACCCCGCCGTGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 90 bp CCACTGCCATTTTGCTGCCCCGTTCCAGGCCTCAGGCAACTTTCCTaGTGCTGCACCCATGGGCACGCCACTGGCCAGACTCTTATGTCC +
Preference number: 5 (lower is better)
Translates to: PLPFCCPVPGLRQLS*CCTHGHATGQTLMS
Trigger: GGACATAAGAGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCAAAATGGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 90 bp ACTCTGGACGATGCACCCTGCTCTCGCCTCCCAAAGATAGGTCCCTaGTTTCCGGCCACCGGCAGGCTCACTGCTCCCTTCAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: TLDDAPCSRLPKIGP*FPATGRLTAPFSGK
Trigger: TTTCCCACTGAAGGGAGCAGTGAGCCTGCCGGTGGCCGGAAAGCAGGGACCTATCTTTGGGAGGCGAGAGCAGGGTGCATCGTCCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTCTGCTCCCACTGAGCTaGTCCATGGCAGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PVLSPDWSRPPRFLHPGPLLPLS*SMAEAE
Trigger: CTCTGCCTCTGCCATGGACAAGCTCAGTGGGAGCAG...AGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp GAGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGCTGCTCCCACTGAGCTaGTCCATGGCAGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ERKTAQGGAGQEANWGQRLLPLS*SMAEAE
Trigger: CTCTGCCTCTGCCATGGACAAGCTCAGTGGGAGCAG...CCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp AGGGTGTCAGCTTCGCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGCCTCATCAGGTTTCTTaGGAGGGCCTGGCACCACTC +
Preference number: 5 (lower is better)
Translates to: RVSASLWPQGLVGKSRQVPHQVS*EGLAPL
Trigger: GAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAGG...CACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGCGAAGCTGACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS-3UTR CAA 90 bp TCTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACCCTCATCAGGTTTCTTaGGAGGGCCTGGCACCACTC +
Preference number: 5 (lower is better)
Translates to: SVHKGQRVPHEVLDHGRHPHQVS*EGLAPL
Trigger: GAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAGG...GTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS TCA 90 bp TCTAGGGTGCGCCTCTGCCCTGGTCCTCCAGCGTGGGGAGCTGTGTaGTGGGTGTCTCTAGTTTGCATCCTAGCAAATGCTGGGTGCGAC +
Preference number: 5 (lower is better)
Translates to: SRVRLCPGPPAWGAV*WVSLVCILANAGCD
Trigger: GTCGCACCCAGCATTTGCTAGGATGCAAACTAGAGACACCCATCACACAGCTCCCCACGCTGGAGGACCAGGGCAGAGGCGCACCCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 90 bp CCTCAGGCAGAACAAAGTGGTGTCCCTGTCTGGGGCACGGCGGGGTaGCGCACACGTGTGTTCAATGTGTTCTTGCAGTGGTGCACCCTT +
Preference number: 5 (lower is better)
Translates to: PQAEQSGVPVWGTAG*RTRVFNVFLQWCTL
Trigger: AAGGGTGCACCACTGCAAGAACACATTGAACACACGTGTGCGGCACCCCGCCGTGCCCCAGACAGGGACACCACTTTGTTCTGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 90 bp CCATTTTGCTGCCCCGTTCCAGGCCTCAGGCAACTTTCCTGCTGCTaGACCCATGGGCACGCCACTGGCCAGACTCTTATGTCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PFCCPVPGLRQLSCC*THGHATGQTLMSKA
Trigger: AGCCTTGGACATAAGAGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCAAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 90 bp CTGCCATTTTGCTGCCCCGTTCCAGGCCTCAGGCAACTTTCCTGCTaGTGCACCCATGGGCACGCCACTGGCCAGACTCTTATGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LPFCCPVPGLRQLSC*CTHGHATGQTLMSK
Trigger: CTTGGACATAAGAGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCAAAATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 90 bp GCTCAACTGAGTCCCCCTCAGGCAGAACAAAGTGGTGTCCCTGTCTaGGGCACGGCGGGGTGCCGCACACGTGTGTTCAATGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AQLSPPQAEQSGVPV*GTAGCRTRVFNVFL
Trigger: CAAGAACACATTGAACACACGTGTGCGGCACCCCGCCGTGCCCCAGACAGGGACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS-3UTR CAA 90 bp GCTGAGGCACTCCCAGTGGGGGCTACAGAGGGAAGAGACGATTTCCTTCCTTCTCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: AEALPVGATEGRDDFLPSRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...AGAAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp CCGCCGGATGGGAATGTTGAAGACCCGGCCTCGGAGAAGCACTGCCAGGGTGAAGCCCTCAGGAGGTTGTaGAGGCAGGAGAATAGCTTG +
Preference number: 5 (lower is better)
Translates to: PPDGNVEDPASEKHCQGEALRRL*RQENSL
Trigger: CAAGCTATTCTCCTGCCTCAACAACCTCCTGAGGGC...TTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp GCTGTGGCCTCAAGGCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGGGACAAGGGCTCCATaGTTCCCATCATTTGCATCT +
Preference number: 5 (lower is better)
Translates to: AVASRLGGEEQAGEFPAAGTRAP*FPSFAS
Trigger: AGATGCAAATGATGGGAACAATGGAGCCCTTGTCCC...GGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAGCCTTGAGGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCAAGAGGGTGTCAGCCTaGGAGAGGCAACAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFIKRVSA*ERQQRG
Trigger: CCCTCTCTGTTGCCTCTCCAAGGCTGACACCCTCTT...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp GAGAGGAAGACAGCCCAAGGTGGGGCGGGACAAGAAGCAAACTGGGGCCAAAGGTGGAGGAAGGGATGCTaGTGTCTCCAAGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ERKTAQGGAGQEANWGQRWRKGC*CLQVPG
Trigger: CCCAGGGACTTGGAGACACAAGCATCCCTTCCTCCA...CCTTTGGCCCCAGTTTGCTTCTTGTCCCGCCCCACCTTGGGCTGTCTTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS CCA 90 bp TCTGGGCTGCTCCTCCTTCCAGGAATGGGAGTTTGCTCTAGGCGATaGAGGAAGGGTTCAGGAGGCCACTCTGCCTGCTTAGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SGLLLLPGMGVCSRR*RKGSGGHSACLAGC
Trigger: ACAGCCTGCTAAGCAGGCAGAGTGGCCTCCTGAACCCTTCCTCCATCGCCTAGAGCAAACTCCCATTCCTGGAAGGAGGAGCAGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 90 bp TCGACCAAGAGGGCATTCTTGACTCTGCCATGTAAAATTGATGCCTaGGCGCAGGGCGCCGACGATGGTCAGATACCGCGGCCTGCACAC +
Preference number: 5 (lower is better)
Translates to: STKRAFLTLPCKIDA*AQGADDGQIPRPAH
Trigger: GTGTGCAGGCCGCGGTATCTGACCATCGTCGGCGCCCTGCGCCCAGGCATCAATTTTACATGGCAGAGTCAAGAATGCCCTCTTGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 90 bp TGGACCAGCCTTTACTCACCTTTAGAGGCAGCATCTGCTGTTCCCTaGCATACAGGAGGTCTGATCAGAAGAGGCCGGGCCCCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: WTSLYSPLEAASAVP*HTGGLIRRGRAPGP
Trigger: GGGACCTGGGGCCCGGCCTCTTCTGATCAGACCTCCTGTATGCCAGGGAACAGCAGATGCTGCCTCTAAAGGTGAGTAAAGGCTGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 90 bp CCTGCTCCCAGCCCCTCCTCACCTCAGCAGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAGACGATTTCCTTCCTTCTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: PAPSPSSPQQLRHSQ*GLQREETISFLLEE
Trigger: TTCTTCTAGAAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGCTGCTGAGGTGAGGAGGGGCTGGGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS-3UTR CAA 90 bp CAGGGCATAGTGGCGTCCGCCATCCAGCCGCCGGATGGGAATGTTGAAGACCCGCCTGTTCCGGAACCTTaGCTCGTAGTATCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QGIVASAIQPPDGNVEDPPVPEP*LVVSLV
Trigger: AACCAGAGATACTACGAGCAAAGGTTCCGGAACAGG...CGGGTCTTCAACATTCCCATCCGGCGGCTGGATGGCGGACGCCACTATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp GCAGGGCACTCTCAACAGCATAGCGGTCACAGTTCCCCGAGTACCAAGGCTGAGCCTCATCAGGTTTCTTaGGAGGGCCTGGCACCACTC +
Preference number: 5 (lower is better)
Translates to: AGHSQQHSGHSSPSTKAEPHQVS*EGLAPL
Trigger: GAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAGG...CTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATGCTGTTGAGAGTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481395.7
ENST00000481426.6
ENST00000651962.1
CDS-3UTR CAA 90 bp AAGGTAGGCCAGTCCCTCTCAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGTGGAGGAAGGGATGCTaGTGTCTCCAAGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: KVGQSLSGCPRPTSRCERWRKGC*CLQVPG
Trigger: CCCAGGGACTTGGAGACACAAGCATCCCTTCCTCCA...CCTCTCACATCTACTTGTGGGCCTAGGGCACCCTGAGAGGGACTGGCCTACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS GCA 90 bp CACACAGGGACCCTAACAGACCTAGTCCAGTCTCAGGGTCTGGGCTaGTCCTCCTTCCAGGAATGGGAGTTTGCTCTAGGCGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: HTGTLTDLVQSQGLG*SSFQEWEFALGDGG
Trigger: TCCTCCATCGCCTAGAGCAAACTCCCATTCCTGGAAGGAGGAGCAGCCCAGACCCTGAGACTGGACTAGGTCTGTTAGGGTCCCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp GGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCATTCTTCGCTGTCGCCGGATGGGAATGTaGAAGACCCGGCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: GSFIQDLVNWADTCILRCRRMGM*KTRPRR
Trigger: TCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCG...ACAGCGAAGAATGCAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CAA 90 bp GAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGAGGTTATTGAATGTGAACTaGTGCAAGGTAGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: EQAGEFPAAAVSVHKGQRLLNVN*CKVGQS
Trigger: GGACTGGCCTACCTTGCACAAGTTCACATTCAATAA...CCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS-3UTR CAA 90 bp GGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCTTATTGAATGTGAACTaGTGCAAGGTAGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GKSRQVSSRLPLCLSTRGLLNVN*CKVGQS
Trigger: GGACTGGCCTACCTTGCACAAGTTCACATTCAATAA...GCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS-3UTR CAA 90 bp TCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCTGCCTCATCAGGTTTCTTaGGAGGGCCTGGCACCACTC +
Preference number: 5 (lower is better)
Translates to: SRPPRFLHPGPSELGRHLPHQVS*EGLAPL
Trigger: GAGTGGTGCCAGGCCCTCCAAAGAAACCTGATGAGG...CAGGTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000481426.6
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp TCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGAAGAGGGTGTCAGCCTaGGAGAGGCAACAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: SPDWSRPPRFLHPGPSELKRVSA*ERQQRG
Trigger: CCCTCTCTGTTGCCTCTCCAAGGCTGACACCCTCTT...CAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS-3UTR CAA 90 bp GAAGAGCAGGCAGGTGAGTTCCCGGCTGCCGCTGTGTCTGTCCACAAGGGGCAGTTATTGAATGTGAACTaGTGCAAGGTAGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: EEQAGEFPAAAVSVHKGQLLNVN*CKVGQS
Trigger: GGACTGGCCTACCTTGCACAAGTTCACATTCAATAA...CTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCACCTGCCTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651962.1
CDS GCA 90 bp GCTGTGAGCCGAAATCGCGCCATTGCTCTCAAACCTGTCCTGCCCTaGCCTGTTCCGGAACCTTTGCTCGTAGTATCTCTGGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: AVSRNRAIALKPVLP*PVPEPLLVVSLVVS
Trigger: TGACACAACCAGAGATACTACGAGCAAAGGTTCCGGAACAGGGCAGGGCAGGACAGGTTTGAGAGCAATGGCGCGATTTCGGCTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000488657.3
CDS CCA 90 bp GAGGAGCTTTGCCTCCCTGGAGCCCAGGATCTGCCACAAATGGCCTaGGGACAAGGGCTCCATTGTTCCCATCATTTGCATCTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: EELCLPGAQDLPQMA*GQGLHCSHHLHLCS
Trigger: AGAACAGAGATGCAAATGATGGGAACAATGGAGCCCTTGTCCCCAGGCCATTTGTGGCAGATCCTGGGCTCCAGGGAGGCAAAGCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 90 bp GCTGAGTCAGCAGATCACTGTCCTCAGCAGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAGACGATTTCCTTCCTTATTCCGAGT +
Preference number: 5 (lower is better)
Translates to: AESADHCPQQLRHSQ*GLQREETISFLIPS
Trigger: ACTCGGAATAAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGTGATCTGCTGACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS-3UTR CAA 90 bp ACAAGGGGCAGAGGGTGCCACATGAAGTGCTGGACCATGGCCGCCACGGAGGAGACCAAGAGGGCATTCTaGACTCTGCCATGTAAAATT +
Preference number: 5 (lower is better)
Translates to: TRGRGCHMKCWTMAATEETKRAF*TLPCKI
Trigger: AATTTTACATGGCAGAGTCAAGAATGCCCTCTTGGT...CTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS TCA 90 bp GGACCCAGGGTGCAGTTATTTATGTTCCCATCTCCTATGCTCAACTaGGTCCCCCTCAGGCAGAACAAAGTGGTGTCCCTGTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: GPRVQLFMFPSPMLN*VPLRQNKVVSLSGA
Trigger: TGCCCCAGACAGGGACACCACTTTGTTCTGCCTGAGGGGGACTCAGTTGAGCATAGGAGATGGGAACATAAATAACTGCACCCTGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 90 bp TCACTACCTTTGGACCAGCCTTTACTCACCTTTAGAGGCAGCATCTaGTGTTCCCTGGCATACAGGAGGTCTGATCAGAAGAGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SLPLDQPLLTFRGSI*CSLAYRRSDQKRPG
Trigger: GCCCGGCCTCTTCTGATCAGACCTCCTGTATGCCAGGGAACAGCAGATGCTGCCTCTAAAGGTGAGTAAAGGCTGGTCCAAAGGTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 90 bp GCTGAGTCAGCAGATCACTGTCCTCAGCAGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAGACGATTTCCTTCCTTCTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: AESADHCPQQLRHSQ*GLQREETISFLLEE
Trigger: TTCTTCTAGAAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGTGATCTGCTGACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340326.2
CDS-3UTR CAA 90 bp CAGCAGTGCCTGTGCTGTCCCCTGACTGGTCTAGGCCACCACGGTTCCTTCATCTTATTGAATGTGAACTaGTGCAAGGTAGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: QQCLCCPLTGLGHHGSFILLNVN*CKVGQS
Trigger: GGACTGGCCTACCTTGCACAAGTTCACATTCAATAA...GATGAAGGAACCGTGGTGGCCTAGACCAGTCAGGGGACAGCACAGGCACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389938.7
ENST00000477170.5
ENST00000651736.1
ENST00000651962.1
CDS TCA 90 bp ATGGGTGTCTCTAGTTTGCATCCTAGCAAATGCTGGGTGCGACATTaGGTCCTGGGGGAGGTAGACAAGAGTCTGAAGATCCTGGACCCC +
Preference number: 5 (lower is better)
Translates to: MGVSSLHPSKCWVRH*VLGEVDKSLKILDP
Trigger: GGGGTCCAGGATCTTCAGACTCTTGTCTACCTCCCCCAGGACTCAATGTCGCACCCAGCATTTGCTAGGATGCAAACTAGAGACACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS-3UTR CAA 90 bp TTTCCTTCCTTCTTTAGAGGCAGCATCTGCTGTTCCATTCCGAGTTTCCTGGGGCTCTGCCATGTAAAATaGATGCCTGGGCGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: FPSFFRGSICCSIPSFLGLCHVK*MPGRRA
Trigger: CGCCCTGCGCCCAGGCATCAATTTTACATGGCAGAG...CCCCAGGAAACTCGGAATGGAACAGCAGATGCTGCCTCTAAAGAAGGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 90 bp CTCTCTTCTTGGCTTGTAAACGGCTGCTTTCTCTGTGTCCTCACATaGCCTCTTGTCTGTAATCCCAGCCCTCAGGAGGTTGTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LSSWLVNGCFLCVLT*PLVCNPSPQEVVEA
Trigger: TGCCTCAACAACCTCCTGAGGGCTGGGATTACAGACAAGAGGCCATGTGAGGACACAGAGAAAGCAGCCGTTTACAAGCCAAGAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp CAGGGTGCCCTAGGCCCACAAGTAGATGTGAGAGGATCCTTTGCTGTTCCAGCACATTCTGTGTCTATGTaGTCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: QGALGPQVDVRGSFAVPAHSVSM*SRLVLN
Trigger: GTTCAAGACCAGCCTGGACAACATAGACACAGAATG...TGCTGGAACAGCAAAGGATCCTCTCACATCTACTTGTGGGCCTAGGGCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS-3UTR CAA 90 bp TGGTCTAGGCCACCACGGTTCCTTCATCCAGGACCTAGTGAACTGGGCAGACACCATTGTTCCCATCATTaGCATCTCTGTTCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: WSRPPRFLHPGPSELGRHHCSHH*HLCSGA
Trigger: AGCTCCAGAACAGAGATGCAAATGATGGGAACAATG...GTGTCTGCCCAGTTCACTAGGTCCTGGATGAAGGAACCGTGGTGGCCTAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 90 bp TCTGTAACTGACTGTGAACAATCAGTTGGGATAACTCACTACCTTTaGACCAGCCTTTACTCACCTTTAGAGGCAGCATCTGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SVTDCEQSVGITHYL*TSLYSPLEAASAVP
Trigger: GGGAACAGCAGATGCTGCCTCTAAAGGTGAGTAAAGGCTGGTCCAAAGGTAGTGAGTTATCCCAACTGATTGTTCACAGTCAGTTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 72 bp GCGTACATGGCCCCGAGCCCAAACCCCGGCACCCAGTaGTTCCTCCACTCTCCAGATCCAGTGCCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: AYMAPSPNPGTQ*FLHSPDPVPWQ
Trigger: CTGCCAGGGCACTGGATCTGGAGAGTGGAGGAAGCACTGGGTGCCGGGGTTTGGGCTCGGGGCCATGTACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340326.2
ENST00000488219.2
CDS GCA 72 bp AGGACCCAGGCCTTCCCCGGGCTTCACCACGAGTCCTaGCGGCCACACAGGGACCCTAACAGACCTAGTCCA +
Preference number: 6 (lower is better)
Translates to: RTQAFPGLHHES*RPHRDPNRPSP
Trigger: TGGACTAGGTCTGTTAGGGTCCCTGTGTGGCCGGCAGGACTCGTGGTGAAGCCCGGGGAAGGCCTGGGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS TCA 72 bp GAGGGACTTCTGGAGAGGCCTCTCACCATGGTGGGCTaGGGCAGGGGTGGCGATGGCTTTGATGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: EGLLERPLTMVG*GRGGDGFDGPR
Trigger: CCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGGTGAGAGGCCTCTCCAGAAGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS GCA 72 bp GATGCACCCTGCTCTCGCCTCCCAAAGATAGGTCCCTaGTTTCCGGCCACCGGCAGGCTCACTGCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: DAPCSRLPKIGP*FPATGRLTAPF
Trigger: GAAGGGAGCAGTGAGCCTGCCGGTGGCCGGAAAGCAGGGACCTATCTTTGGGAGGCGAGAGCAGGGTGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481426.6
ENST00000488219.2
ENST00000651736.1
ENST00000651962.1
CDS GCA 72 bp GCCCAAGAGGGTTCCTGGGTAAGGACTCTCAGGCTCTaGTCCCGGAACCTCTCCCTACAGCCTGCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: AQEGSWVRTLRL*SRNLSLQPAPS
Trigger: GCTGGGAGCAGGCTGTAGGGAGAGGTTCCGGGAGCAGAGCCTGAGAGTCCTTACCCAGGAACCCTCTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 72 bp TGCTGCCCCGTTCCAGGCCTCAGGCAACTTTCCTGCTaGTGCACCCATGGGCACGCCACTGGCCAGACTCTT +
Preference number: 6 (lower is better)
Translates to: CCPVPGLRQLSC*CTHGHATGQTL
Trigger: AAGAGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 72 bp CTGTCCACAAGGGGCAGAGGGTGCCACATGAAGTGCTaGACCATGGCCGCCACGGAGGAGAAGAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LSTRGRGCHMKC*TMAATEEKSWP
Trigger: TGGCCAGCTCTTCTCCTCCGTGGCGGCCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CAA 90 bp GATGCACCCTGCTCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAGAGTGATCCAGGTACAAGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: DAPCSWWAEAGVAMA*MDPGGQSDPGTRSP
Trigger: AGGACTCCTTGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGAGCAGGGTGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS TCA 72 bp GCTCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGAGTGATCCAGGTACAA +
Preference number: 6 (lower is better)
Translates to: AHGGLRQGWRWL*WTQGARVIQVQ
Trigger: TTGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS TCA 72 bp CAGCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGAGTGATCCAGGTACAA +
Preference number: 6 (lower is better)
Translates to: QHGGLRQGWRWL*WTQGARVIQVQ
Trigger: TTGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000488219.2
CDS TCA 72 bp CACCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTTaGTGGACCCAGGGGGCCAGAGTGATCCAGGTACAA +
Preference number: 6 (lower is better)
Translates to: HHGGLRQGWRWL*WTQGARVIQVQ
Trigger: TTGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS GCA 72 bp GGAGGCGGAGGTTGCTGTGAGCCGAAATCGCGCCATTaGTCTCAAACCTGTCCTGCCCTGCCCTGTTCCGGA +
Preference number: 6 (lower is better)
Translates to: GGGGCCEPKSRH*SQTCPALPCSG
Trigger: TCCGGAACAGGGCAGGGCAGGACAGGTTTGAGAGCAATGGCGCGATTTCGGCTCACAGCAACCTCCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000488657.3
CDS GCA 72 bp TGCCCCGTTCCAGGCCTCAGGCAACTTTCCTGCTGCTaGACCCATGGGCACGCCACTGGCCAGACTCTTATG +
Preference number: 6 (lower is better)
Translates to: CPVPGLRQLSCC*THGHATGQTLM
Trigger: CATAAGAGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 72 bp TTTTGCTGCCCCGTTCCAGGCCTCAGGCAACTTTCCTaGTGCTGCACCCATGGGCACGCCACTGGCCAGACT +
Preference number: 6 (lower is better)
Translates to: FCCPVPGLRQLS*CCTHGHATGQT
Trigger: AGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 72 bp AGTCCCCCTCAGGCAGAACAAAGTGGTGTCCCTGTCTaGGGCACGGCGGGGTGCCGCACACGTGTGTTCAAT +
Preference number: 6 (lower is better)
Translates to: SPPQAEQSGVPV*GTAGCRTRVFN
Trigger: ATTGAACACACGTGTGCGGCACCCCGCCGTGCCCCAGACAGGGACACCACTTTGTTCTGCCTGAGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 72 bp GGAAGGAGGGACTTCTGGAGAGGCCTCTCACCATGGTaGGCTGAGGCAGGGGTGGCGATGGCTTTGATGGAC +
Preference number: 6 (lower is better)
Translates to: GRRDFWRGLSPW*AEAGVAMALMD
Trigger: GTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGGTGAGAGGCCTCTCCAGAAGTCCCTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS CAA 72 bp TGCTCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAGAGTGATCCAGGTACA +
Preference number: 6 (lower is better)
Translates to: CSWWAEAGVAMA*MDPGGQSDPGT
Trigger: TGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000481395.7
CDS CAA 72 bp TCAGCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAGAGTGATCCAGGTACA +
Preference number: 6 (lower is better)
Translates to: SAWWAEAGVAMA*MDPGGQSDPGT
Trigger: TGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481426.6
ENST00000488219.2
CDS CAA 72 bp TCACCATGGTGGGCTGAGGCAGGGGTGGCGATGGCTTaGATGGACCCAGGGGGCCAGAGTGATCCAGGTACA +
Preference number: 6 (lower is better)
Translates to: SPWWAEAGVAMA*MDPGGQSDPGT
Trigger: TGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGCCATCGCCACCCCTGCCTCAGCCCACCATGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651736.1
ENST00000651962.1
CDS TCA 72 bp CAGGACCCACCAGCCAGGCCTCGTGTGACCTCCAAATaGGGCGTGATCTTGGGGCACAGACTAGGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: QDPPARPRVTSK*GVILGHRLGAS
Trigger: GGAAGCTCCTAGTCTGTGCCCCAAGATCACGCCTCATTTGGAGGTCACACGAGGCCTGGCTGGTGGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340326.2
ENST00000488219.2
CDS GCA 72 bp CGGCGGGGTGCCGCACACGTGTGTTCAATGTGTTCTTaGAGTGGTGCACCCTTCAGCCCAAGAGGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: RRGAAHVCSMCS*SGAPFSPRGFL
Trigger: CAGGAACCCTCTTGGGCTGAAGGGTGCACCACTGCAAGAACACATTGAACACACGTGTGCGGCACCCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 72 bp TCCTGTTTGCCCCATGCCGCTCCACTGCCATTTTGCTaGCCCGTTCCAGGCCTCAGGCAACTTTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SCLPHAAPLPFC*PVPGLRQLSCC
Trigger: GCAGCAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCAAAATGGCAGTGGAGCGGCATGGGGCAAACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 72 bp TCCAGGCCTCAGGCAACTTTCCTGCTGCTGCACCCATaGGCACGCCACTGGCCAGACTCTTATGTCCAAGGC +
Preference number: 6 (lower is better)
Translates to: SRPQATFLLLHP*ARHWPDSYVQG
Trigger: GCCTTGGACATAAGAGTCTGGCCAGTGGCGTGCCCATGGGTGCAGCAGCAGGAAAGTTGCCTGAGGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS GCA 72 bp GAACAAAGTGGTGTCCCTGTCTGGGGCACGGCGGGGTaGCGCACACGTGTGTTCAATGTGTTCTTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: EQSGVPVWGTAG*RTRVFNVFLQW
Trigger: CCACTGCAAGAACACATTGAACACACGTGTGCGGCACCCCGCCGTGCCCCAGACAGGGACACCACTTTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 72 bp TCCCCTGACCATCAGCCTCTTACATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTGGGCACCACTGATGTC +
Preference number: 6 (lower is better)
Translates to: SPDHQPLTFRVS*GAVVGLGTTDV
Trigger: GACATCAGTGGTGCCCAGGCCTACCACAGCCCCCCAGGAAACTCGGAATGTAAGAGGCTGATGGTCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CAA 72 bp ACGGCGGGGTGCCGCACACGTGTGTTCAATGTGTTCTaGCAGTGGTGCACCCTTCAGCCCAAGAGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: TAGCRTRVFNVF*QWCTLQPKRVP
Trigger: AGGAACCCTCTTGGGCTGAAGGGTGCACCACTGCAAGAACACATTGAACACACGTGTGCGGCACCCCGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CAA 72 bp TCCTTCCTGTTTGCCCCATGCCGCTCCACTGCCATTTaGCTGCCCCGTTCCAGGCCTCAGGCAACTTTCCTG +
Preference number: 6 (lower is better)
Translates to: SFLFAPCRSTAI*LPRSRPQATFL
Trigger: CAGGAAAGTTGCCTGAGGCCTGGAACGGGGCAGCAAAATGGCAGTGGAGCGGCATGGGGCAAACAGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CCA 72 bp AGGGCATTCTTGACTCTGCCATGTAAAATTGATGCCTaGGCGCAGGGCGCCGACGATGGTCAGATACCGCGG +
Preference number: 6 (lower is better)
Translates to: RAFLTLPCKIDA*AQGADDGQIPR
Trigger: CCGCGGTATCTGACCATCGTCGGCGCCCTGCGCCCAGGCATCAATTTTACATGGCAGAGTCAAGAATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 72 bp CGTGATCTTGGGGCACAGACTAGGAGCTTCCTGATTTaGTGCAGGCACCGGAAAATGCCCAAGAGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: RDLGAQTRSFLI*CRHRKMPKRVP
Trigger: GGGGACCCTCTTGGGCATTTTCCGGTGCCTGCACCAAATCAGGAAGCTCCTAGTCTGTGCCCCAAGATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CAA 90 bp TGGAGCCCAGGATCTGCCACAAATGGCCTGGGGACAAGGGCTCCATaGTTCCCATCATTTGCATCTCCTGTAATCCCAGCCCTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: WSPGSATNGLGTRAP*FPSFASPVIPALRR
Trigger: CCTCCTGAGGGCTGGGATTACAGGAGATGCAAATGATGGGAACAATGGAGCCCTTGTCCCCAGGCCATTTGTGGCAGATCCTGGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488657.3
CDS CCA 72 bp GCAGATCACTGTCCTCAGCAGCTGAGGCACTCCCAGTaGGGGCTACAGAGGGAAGAGACGATTTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: ADHCPQQLRHSQ*GLQREETISFL
Trigger: AAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGGAGTGCCTCAGCTGCTGAGGACAGTGATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340326.2
ENST00000477170.5
ENST00000481426.6
ENST00000651736.1
CDS CCA 72 bp CTCCTCCTTCCAGGAATGGGAGTTTGCTCTAGGCGATaGAGGAAGGGTTCAGGAGGCCACTCTGCCTGCTTA +
Preference number: 6 (lower is better)
Translates to: LLLPGMGVCSRR*RKGSGGHSACL
Trigger: TAAGCAGGCAGAGTGGCCTCCTGAACCCTTCCTCCATCGCCTAGAGCAAACTCCCATTCCTGGAAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 72 bp TGCCTCCCTGGAGCCCAGGATCTGCCACAAATGGCCTaGGGACAAGGGCTCCATTGTTCCCATCATTTGCAT +
Preference number: 6 (lower is better)
Translates to: CLPGAQDLPQMA*GQGLHCSHHLH
Trigger: ATGCAAATGATGGGAACAATGGAGCCCTTGTCCCCAGGCCATTTGTGGCAGATCCTGGGCTCCAGGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000488657.3
CDS CCA 72 bp GGGAAGAGACGATTTCCTTCCTTATTCCGAGTTTCCTaGGGGGCTGTGGTAGGCCTGGGCACCACTGATGTC +
Preference number: 6 (lower is better)
Translates to: GKRRFPSLFRVS*GAVVGLGTTDV
Trigger: GACATCAGTGGTGCCCAGGCCTACCACAGCCCCCCAGGAAACTCGGAATAAGGAAGGAAATCGTCTCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477170.5
ENST00000481426.6
CDS GCA 72 bp CGAAATCGCGCCATTGCTCTCAAACCTGTCCTGCCCTaGCCTGTTCCGGAACCTTTGCTCGTAGTATCTCTG +
Preference number: 6 (lower is better)
Translates to: RNRAIALKPVLP*PVPEPLLVVSL
Trigger: CAGAGATACTACGAGCAAAGGTTCCGGAACAGGGCAGGGCAGGACAGGTTTGAGAGCAATGGCGCGATTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389938.7
ENST00000488657.3
CDS CAA 72 bp GGATCTGCCACAAATGGCCTGGGGACAAGGGCTCCATaGTTCCCATCATTTGCATCTCCTGTAATCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GSATNGLGTRAP*FPSFASPVIPA
Trigger: GGCTGGGATTACAGGAGATGCAAATGATGGGAACAATGGAGCCCTTGTCCCCAGGCCATTTGTGGCAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488657.3
CDS CCA 72 bp TGGCTTGTAAACGGCTGCTTTCTCTGTGTCCTCACATaGCCTCTTGTCTGTAATCCCAGCCCTCAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: WLVNGCFLCVLT*PLVCNPSPQEV
Trigger: AACCTCCTGAGGGCTGGGATTACAGACAAGAGGCCATGTGAGGACACAGAGAAAGCAGCCGTTTACAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS GCA 72 bp TTGGACCAGCCTTTACTCACCTTTAGAGGCAGCATCTaGTGTTCCCTGGCATACAGGAGGTCTGATCAGAAG +
Preference number: 6 (lower is better)
Translates to: LDQPLLTFRGSI*CSLAYRRSDQK
Trigger: CTTCTGATCAGACCTCCTGTATGCCAGGGAACAGCAGATGCTGCCTCTAAAGGTGAGTAAAGGCTGGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CAA 90 bp AGATCAAGGTGCCATAAAGGTTGGTTTGTGATGCGGCCTCTCTTCTaGGCTTGTAAACGGCTGCTTTCTCTGTGTCCTCACATGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RSRCHKGWFVMRPLF*ACKRLLSLCPHMAS
Trigger: AGAGGCCATGTGAGGACACAGAGAAAGCAGCCGTTTACAAGCCAAGAAGAGAGGCCGCATCACAAACCAACCTTTATGGCACCTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS TCA 72 bp TCTAGTTTGCATCCTAGCAAATGCTGGGTGCGACATTaGGTCCTGGGGGAGGTAGACAAGAGTCTGAAGATC +
Preference number: 6 (lower is better)
Translates to: SSLHPSKCWVRH*VLGEVDKSLKI
Trigger: GATCTTCAGACTCTTGTCTACCTCCCCCAGGACTCAATGTCGCACCCAGCATTTGCTAGGATGCAAACTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS CAA 72 bp TGCCATAAAGGTTGGTTTGTGATGCGGCCTCTCTTCTaGGCTTGTAAACGGCTGCTTTCTCTGTGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: CHKGWFVMRPLF*ACKRLLSLCPH
Trigger: GTGAGGACACAGAGAAAGCAGCCGTTTACAAGCCAAGAAGAGAGGCCGCATCACAAACCAACCTTTATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 72 bp GGAGCTAGAAGTCTAAGATCAAGGTGCCATAAAGGTTaGTTTGTGATGCGGCCTCTCTTCTTGGCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: GARSLRSRCHKG*FVMRPLFLACK
Trigger: TTTACAAGCCAAGAAGAGAGGCCGCATCACAAACCAACCTTTATGGCACCTTGATCTTAGACTTCTAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389938.7
CDS CCA 72 bp GACTGTGAACAATCAGTTGGGATAACTCACTACCTTTaGACCAGCCTTTACTCACCTTTAGAGGCAGCATCT +
Preference number: 6 (lower is better)
Translates to: DCEQSVGITHYL*TSLYSPLEAAS
Trigger: AGATGCTGCCTCTAAAGGTGAGTAAAGGCTGGTCCAAAGGTAGTGAGTTATCCCAACTGATTGTTCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488219.2
CDS TCA 72 bp GTAGTGAGAAGTGGGGAAAGGGTAGAACAAGGAGTTTaGTCTGTAACTGACTGTGAACAATCAGTTGGGATA +
Preference number: 6 (lower is better)
Translates to: VVRSGERVEQGV*SVTDCEQSVGI
Trigger: TATCCCAACTGATTGTTCACAGTCAGTTACAGATCAAACTCCTTGTTCTACCCTTTCCCCACTTCTCACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488219.2