RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH2D5 (Homo sapiens)

Ensembl gene IDs: ENSG00000189410

Ensembl transcript IDs: ENST00000375031.5, ENST00000444387.7, ENST00000447746.6, ENST00000460804.5, ENST00000517430.5, ENST00000518294.5, ENST00000519434.1

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATaGCCCGCTGAGGCCAAGCGCCCCCGGCAGGGCCCACATCAGGTC +
Preference number: 1 (lower is better)
Translates to: AGPLPHTRVVSLGLP*PAEAKRPRQGPHQV
Trigger: GACCTGATGTGGGCCCTGCCGGGGGCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp GTCAGTCACTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTaGGTCTCCCATGGCCCGCTGAGGCCAAGCGCCCCCGGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: VSHWQDHCLTLESFP*VSHGPLRPSAPGRA
Trigger: GGCCCTGCCGGGGGCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAGTGACTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 90 bp GGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGACTaGCCCCATTCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCC +
Preference number: 1 (lower is better)
Translates to: GRAHIRSTFRRFCCD*PHSQWGWPGEARWP
Trigger: GGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGAATGGGGTCAGTCACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp GAAGTTACAAGGTCCCAGGCCAAGCCCCTCTCCTCACGGGAGGGTTaGAGGTGGGGAACACGAGGCCTGGGCCTCTGGGAGGCTGGCTTC +
Preference number: 1 (lower is better)
Translates to: EVTRSQAKPLSSREG*RWGTRGLGLWEAGF
Trigger: GAAGCCAGCCTCCCAGAGGCCCAGGCCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGGAGAGGGGCTTGGCCTGGGACCTTGTAACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp GACGCGATGGAAGACTGCTCCAAGGGCAGGGTGACTGGATGGAACTaGCAACCAGAGGGGTGCAGGACGGGCAGAGATGCTGCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: DAMEDCSKGRVTGWN*QPEGCRTGRDAAGA
Trigger: GGCCCCAGCAGCATCTCTGCCCGTCCTGCACCCCTCTGGTTGCCAGTTCCATCCAGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 90 bp AGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTaGCGCGATGGAAGACTGCTCCAAGGGCAGGGTGACTGGATGGAA +
Preference number: 1 (lower is better)
Translates to: SHWRYPPSGLPSHGQ*RDGRLLQGQGDWME
Trigger: TTCCATCCAGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp GTCAGCATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATaGGGTCGAGTTAGGAAGGGCCCTGGTCACCCCTCTAAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: VSIGQPPSQGSHQTT*GRVRKGPGHPSKPA
Trigger: TGCAGGCTTAGAGGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGATGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp GTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTaGCGTGAACAAGCTCCTGCCCCAGGAGTAAAGCAGAAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: VSAPRPSLLRRGLQL*REQAPAPGVKQKPR
Trigger: TCTGGGCTTCTGCTTTACTCCTGGGGCAGGAGCTTGTTCACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp CGAGTTAGGAAGGGCCCTGGTCACCCCTCTAAGCCTGCAGCTCACTaGTGGCCCCTCCCTGTCAAATGGCTAAAGGAGATGAGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: RVRKGPGHPSKPAAH*WPLPVKWLKEMSWG
Trigger: CCCCCAGCTCATCTCCTTTAGCCATTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGGCTTAGAGGGGTGACCAGGGCCCTTCCTAACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp GACAGTGACGCGATGGAAGACTGCTCCAAGGGCAGGGTGACTGGATaGAACTGGCAACCAGAGGGGTGCAGGACGGGCAGAGATGCTGCT +
Preference number: 1 (lower is better)
Translates to: DSDAMEDCSKGRVTG*NWQPEGCRTGRDAA
Trigger: AGCAGCATCTCTGCCCGTCCTGCACCCCTCTGGTTGCCAGTTCCATCCAGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp CACACAGCAGGTCATCCGAAGCCACCCAAAGGGTTATCCGAAGCCTaGAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCACATGTTC +
Preference number: 1 (lower is better)
Translates to: HTAGHPKPPKGLSEA*NSTCPPGISAGHMF
Trigger: GAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCTTCGGATGACCTGCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp CCTGAGGTTTTGAGTGGAGACAGCATGGAGATTCTTGGCCCTGTCTaGTGGTGCGCATCCCTTTCTGCACACAGGAGTCCACCGTGCGTG +
Preference number: 1 (lower is better)
Translates to: PEVLSGDSMEILGPV*WCASLSAHRSPPCV
Trigger: CACGCACGGTGGACTCCTGTGTGCAGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTGTCTCCACTCAAAACCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp GAGGTTTTGAGTGGAGACAGCATGGAGATTCTTGGCCCTGTCTGCTaGTGCGCATCCCTTTCTGCACACAGGAGTCCACCGTGCGTGAGC +
Preference number: 1 (lower is better)
Translates to: EVLSGDSMEILGPVC*CASLSAHRSPPCVS
Trigger: GCTCACGCACGGTGGACTCCTGTGTGCAGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTGTCTCCACTCAAAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp CATCCGAAGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTaGCCTCCTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCA +
Preference number: 1 (lower is better)
Translates to: HPKPPKGLSEACNST*PPGISAGHMFSKKP
Trigger: TGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCTTCGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp GTTTTGAGTGGAGACAGCATGGAGATTCTTGGCCCTGTCTGCTGGTaGGCATCCCTTTCTGCACACAGGAGTCCACCGTGCGTGAGCGTT +
Preference number: 1 (lower is better)
Translates to: VLSGDSMEILGPVCW*ASLSAHRSPPCVSV
Trigger: AACGCTCACGCACGGTGGACTCCTGTGTGCAGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTGTCTCCACTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp GCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTaGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGAT +
Preference number: 1 (lower is better)
Translates to: ATQRVIRSLQLHLPS*NLSRPHVLQEAIGD
Trigger: ATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp CAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGGACCACTaGCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTG +
Preference number: 1 (lower is better)
Translates to: QVCLQRGFVSHWQDH*LTLESFPWVSHGPL
Trigger: CAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp TCCTTGCCAGGGAAATGTGAGGCTGGGGCCTCCCATAGAGACCAGTaGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCC +
Preference number: 1 (lower is better)
Translates to: SLPGKCEAGASHRDQ*FVQAPVQMAVKQSP
Trigger: GGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGGTCTCTATGGGAGGCCCCAGCCTCACATTTCCCTGGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 90 bp AACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGGACCAATaGCCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGA +
Preference number: 1 (lower is better)
Translates to: NPSLTEESLGPSLDQ*PGLLKCPSLGCNPR
Trigger: TCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp ACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTaGACCAATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTA +
Preference number: 1 (lower is better)
Translates to: TSKTHPSQRRALAQV*TNDQVFLSAHLWAV
Trigger: TACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp TCTCACTCCCCAAGTTTGCCTCCTTTCTTTCTGCTCTGGTGGGACTaGCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCA +
Preference number: 1 (lower is better)
Translates to: SHSPSLPPFFLLWWD*PVPSRSQKSVTFKA
Trigger: TGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCCCACCAGAGCAGAAAGAAAGGAGGCAAACTTGGGGAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp AGGGCAGTTCCTTCTATCTTTTGTGACAGGATAGCTCACTTAACTTaGAAGGAAGTTACAAGGTCCCAGGCCAAGCCCCTCTCCTCACGG +
Preference number: 1 (lower is better)
Translates to: RAVPSIFCDRIAHLT*KEVTRSQAKPLSSR
Trigger: CCGTGAGGAGAGGGGCTTGGCCTGGGACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTATCCTGTCACAAAAGATAGAAGGAACTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTaGTTGGTGGAGACTGGTCCCTTCAGTGTGCTAAACATGGCCCTG +
Preference number: 1 (lower is better)
Translates to: SVTRDQSMLAGGMLK*LVETGPFSVLNMAL
Trigger: CAGGGCCATGTTTAGCACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp TCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGGAGACTaGTCCCTTCAGTGTGCTAAACATGGCCCTGATAGCTTCTCCACA +
Preference number: 1 (lower is better)
Translates to: SIYAGWRDVKVLGGD*SLQCAKHGPDSFST
Trigger: TGTGGAGAAGCTATCAGGGCCATGTTTAGCACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 90 bp CAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTaGAGGGATGTTAAAGTGCTTGGTGGAGACTGGTCCCTTCAGTGT +
Preference number: 1 (lower is better)
Translates to: QKPCPLCNTRSIYAG*RDVKVLGGDWSLQC
Trigger: ACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 90 bp ACTTGTTCTATAACAGAGTTCAGTAGATTCATTATTTGTCAAGTTTaGTTACAAAGAGGGTTTGTCAGTCACTGGCAGGACCACTGCCTC +
Preference number: 1 (lower is better)
Translates to: TCSITEFSRFIICQV*LQRGFVSHWQDHCL
Trigger: GAGGCAGTGGTCCTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCTACTGAACTCTGTTATAGAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 90 bp GCTCATGACGTGGCTTCTGCTTCAATAAGAGAAGTTCATGCAAAATaGACTTGTTCTATAACAGAGTTCAGTAGATTCATTATTTGTCAA +
Preference number: 1 (lower is better)
Translates to: AHDVASASIREVHAK*TCSITEFSRFIICQ
Trigger: TTGACAAATAATGAATCTACTGAACTCTGTTATAGAACAAGTTCATTTTGCATGAACTTCTCTTATTGAAGCAGAAGCCACGTCATGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGCCTGCAGCTCACTGCTaGCCCCTCCCTGTCAAATGG +
Preference number: 2 (lower is better)
Translates to: SQWGWPGEARWPLTATVRPAAHC*PLPVKW
Trigger: CCATTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGG...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGCACAGGAGTCCACCGTaGGTGAGCGTTAGGTACAGC +
Preference number: 2 (lower is better)
Translates to: SQWGWPGEARWPLTATVRHRSPP*VSVRYS
Trigger: GCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGAGCCACCAAACCACATaGGGTCGAGTTAGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: SQWGWPGEARWPLTATVRSHQTT*GRVRKG
Trigger: GCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCT...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCCCCTCCCACGGACAGTaGCGCGATGGAAGACTGCTC +
Preference number: 2 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPPSHGQ*RDGRLL
Trigger: GAGCAGTCTTCCATCGCGTCACTGTCCGTGGGAGGG...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCCGGTTCTGCTGTGACTaGCCCCATTCCCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPRFCCD*PHSQWG
Trigger: GCCCCACTGGGAATGGGGTCAGTCACAGCAGAACCG...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp CAAGCGCCCCCGGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGGACGCGATGGAAGACTaGTCCAAGGGCAGGGTGACT +
Preference number: 2 (lower is better)
Translates to: QAPPAGPTSGPPFDGSAVDAMED*SKGRVT
Trigger: AGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTC...CACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCCGGGGGCGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCCCTGCGCATCCCTTCTaGGAAAGCGGGAGTCACAGC +
Preference number: 2 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPPAHPF*ESGSHS
Trigger: GCTGTGACTCCCGCTTTCTCAGAAGGGATGCGCAGG...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CAA 90 bp TGCCCTCCTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATaGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACG +
Preference number: 2 (lower is better)
Translates to: CPPGISAGHMFSKKP*AIPTLRAPLPRTVT
Trigger: CGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGAGAGGGCTGCAGCTTTaGCGTGAACAAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAERGLQL*REQAPA
Trigger: GGCAGGAGCTTGTTCACGGCAAAGCTGCAGCCCTCT...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCAAGCCTGCAGCTCACTaGTGGCCCCTCCCTGTCAAA +
Preference number: 2 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPKPAAH*WPLPVK
Trigger: TTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGGCTT...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCCGGACAGTGACGCGATaGAAGACTGCTCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPRTVTR*KTAPRA
Trigger: TGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCG...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCCGGACAGTGACGCGATaGAAGACTGCTCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPRTVTR*KTAPRA
Trigger: TGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCG...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCCAGCATGGAGATTCTTaGCCCTGTCTGCTGGTGCGC +
Preference number: 2 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPQHGDS*PCLLVR
Trigger: GCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTG...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGTCTCCAAGAAGCCATTaGCGATACCCACCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAESPRSH*RYPPSG
Trigger: CCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGA...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCCCTAGGGGGAAGGGGTaGGCCTGCGCATCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLPRGKG*ACASLL
Trigger: CAGAAGGGATGCGCAGGCTCACCCCTTCCCCCTAGG...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTAGGCAAGGTGGCCCCTaGCAGCCACGGTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLRQGGP*QPRSGP
Trigger: TGGCCCTGACCGTGGCTGTCAGGGGCCACCTTGCCT...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCATTCTTGGCCCTGTCTaGTGGTGCGCATCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPILGPV*WCASLS
Trigger: AGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAAT...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCTGCCCACAAGCTCCATaGAGTCATCTCTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPCPQAP*SHLCSH
Trigger: ATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCA...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTCCCTGGGTCTCCCATaGCCCGCTGAGGCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTSLGLP*PAEAKR
Trigger: GCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTGGGGAACACGAGGCCTaGGCCTCTGGGAGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTGEHEA*ASGRLA
Trigger: AGCCAGCCTCCCAGAGGCCCAGGCCTCGTGTTCCCC...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp TCCCCAGCCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGACGCGATGGAAGACTaGTCCAAGGGCAGGGTGACT +
Preference number: 2 (lower is better)
Translates to: SPASCPQAPWSHLCSHRQDAMED*SKGRVT
Trigger: AGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTC...CTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGCCTGGTGAGGCAAGGTaGCCCCTGACAGCCACGGTC +
Preference number: 2 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGPGEAR*PLTATV
Trigger: GACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGG...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCGAGGCCTGGGCCTCTaGGAGGCTGGCTTCTCACTC +
Preference number: 2 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTRGLGL*EAGFSL
Trigger: GAGTGAGAAGCCAGCCTCCCAGAGGCCCAGGCCTCG...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCTCCTCACGGGAGGGTTaGAGGTGGGGAACACGAGGC +
Preference number: 2 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLSSREG*RWGTRG
Trigger: GCCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGGA...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCGCTCCAAGGGCAGGGTaGCTGGATGGAACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLAPRAG*LDGTGN
Trigger: GTTGCCAGTTCCATCCAGTCACCCTGCCCTTGGAGC...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp ATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGGGGAGAGAGAGGGCTGCAGCTTTaGCGTGAACAAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: ICDFQGTEQFCPTPRRGERGLQL*REQAPA
Trigger: GGCAGGAGCTTGTTCACGGCAAAGCTGCAGCCCTCT...CTCTCCCCGTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGGACCACCAAAACCCTCTTTCTaGAGACTCCCAGTCAGCGCC +
Preference number: 2 (lower is better)
Translates to: SPVKPIPHRGEPWPKSGPPKPSF*RLPVSA
Trigger: GGCGCTGACTGGGAGTCTCCAGAAAGAGGGTTTTGG...TGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGCATTCCCAGTGGGGCTaGCCTGGTGAGGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LPSSFQESEICDFQGTEQHSQWG*PGEARW
Trigger: CCACCTTGCCTCACCAGGCCAGCCCCACTGGGAATG...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACAGGGCCTCTGGGAGGCTaGCTTCTCACTCCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTGPLGG*LLTPQV
Trigger: AACTTGGGGAGTGAGAAGCCAGCCTCCCAGAGGCCC...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAAGCTCCAAGGGCAGGGTaGCTGGATGGAACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: GLPSSFQESEICDFQGTEAPRAG*LDGTGN
Trigger: GTTGCCAGTTCCATCCAGTCACCCTGCCCTTGGAGC...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTCGACGGTTCTGCTGTaGCTGACCCCATTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTSTVLL*LTPFPV
Trigger: CACTGGGAATGGGGTCAGTCACAGCAGAACCGTCGA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGCCTGCAACTCCACCTaGCCTCCTGGAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSACNST*PPGISA
Trigger: TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGC...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACAGGGTTATCCGAAGCCTaGAACTCCACCTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTGLSEA*NSTCPP
Trigger: AGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCC...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCTCTCCAAGAAGCCATTaGCGATACCCACCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLSPRSH*RYPPSG
Trigger: CCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGA...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAACCTGCAGCTCACTGCTaGCCCCTCCCTGTCAAATGG +
Preference number: 2 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQPAAHC*PLPVKW
Trigger: CCATTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGG...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGCTAGAGTCGTTTCCCTaGGTCTCCCATGGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: LPSSFQESEICDFQGTEQLESFP*VSHGPL
Trigger: CAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAG...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTCCTAGGGGGAAGGGGTaGGCCTGCGCATCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLPRGKG*ACASLL
Trigger: CAGAAGGGATGCGCAGGCTCACCCCTTCCCCCTAGG...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAAGGGTTATCCGAAGCCTaGAACTCCACCTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: GLPSSFQESEICDFQGTEGLSEA*NSTCPP
Trigger: AGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCC...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp ATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGGGGAGAGCCCCTCCCTGTCAAATaGCTAAAGGAGATGAGCTGG +
Preference number: 2 (lower is better)
Translates to: ICDFQGTEQFCPTPRRGEPLPVK*LKEMSW
Trigger: CCAGCTCATCTCCTTTAGCCATTTGACAGGGAGGGG...CTCTCCCCGTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCCCCCTCCCTGTCAAATaGCTAAAGGAGATGAGCTGG +
Preference number: 2 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLPLPVK*LKEMSW
Trigger: CCAGCTCATCTCCTTTAGCCATTTGACAGGGAGGGG...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACCTAGAGTCGTTTCCCTaGGTCTCCCATGGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDLESFP*VSHGPL
Trigger: CAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAG...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGCCATGGAGTCATCTCTaGTCTCATAGACAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGPWSHL*SHRQGG
Trigger: GCCACCCTGTCTATGAGAGCAGAGATGACTCCATGG...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACCAGCATGGAGATTCTTaGCCCTGTCTGCTGGTGCGC +
Preference number: 2 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDQHGDS*PCLLVR
Trigger: GCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTG...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAATCCTTAGGAGAGGGCTaGAGCTTTGCCGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: GLPSSFQESEICDFQGTESLGEG*SFAVNK
Trigger: CTTGTTCACGGCAAAGCTGCAGCCCTCTCCTAAGGA...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAATTAAGTGCCCATCTCTaGGCTGTAATCCTAGACCCA +
Preference number: 2 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKLSAHL*AVILDP
Trigger: TGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAA...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTCGGGAGTCACAGCCCTaGGGTTTTGAGTGGAGACAG +
Preference number: 2 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLRESQP*GFEWRQ
Trigger: CTGTCTCCACTCAAAACCTCAGGGCTGTGACTCCCG...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAATATGAGAAACAGCCCTaGTCTGTCAGCCTAGATGGG +
Preference number: 2 (lower is better)
Translates to: GLPSSFQESEICDFQGTEYEKQP*SVSLDG
Trigger: CCCATCTAGGCTGACAGAGCAGGGCTGTTTCTCATA...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACCACTGGCAGGACCACTaGCTCACACTAGAGTCGTTT +
Preference number: 2 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDHWQDH*LTLESF
Trigger: AAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAGTG...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAAGTGCTTGGTGGAGACTaGTCCCTTCAGTGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQVLGGD*SLQCAK
Trigger: TTTAGCACACTGAAGGGACCAGTCTCCACCAAGCAC...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CAA 90 bp GTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTaGGTGGAGACTGGTCCCTTCAGTGTGCTAAACATGGCCCTGATA +
Preference number: 2 (lower is better)
Translates to: VTRDQSMLAGGMLKC*VETGPFSVLNMALI
Trigger: TATCAGGGCCATGTTTAGCACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACTGCCCACAAGCTCCATaGAGTCATCTCTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDCPQAP*SHLCSH
Trigger: ATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCA...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTCACAGAGGAGAGCCTTaGCCCAAGTCTGGACCAATG +
Preference number: 2 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLHRGEP*PKSGPM
Trigger: CATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTG...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR TCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAAACTCTCAGATACATATaGGAAACAGCCCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQTLRYI*ETALLC
Trigger: ACAGAGCAGGGCTGTTTCTCATATGTATCTGAGAGT...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTATAGCTCACTTAACTTaGAAGGAAGTTACAAGGTCC +
Preference number: 2 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSIAHLT*KEVTRS
Trigger: GGACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTAT...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTTCCCATAGAGACCAGTaGTTTGTCCAGGCTCCAGTA +
Preference number: 2 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLSHRDQ*FVQAPV
Trigger: TACTGGAGCCTGGACAAACCACTGGTCTCTATGGGA...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR GCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGTCCTTAGGAGAGGGCTaGAGCTTTGCCGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQSLGEG*SFAVNK
Trigger: CTTGTTCACGGCAAAGCTGCAGCCCTCTCCTAAGGA...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTTCAATCTATGCTGGCTaGAGGGATGTTAAAGTGCTT +
Preference number: 2 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLSIYAG*RDVKVL
Trigger: AAGCACTTTAACATCCCTCCAGCCAGCATAGATTGA...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp CTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATaGCCCGCTGAGGCCAAGCGCCCCCGGCAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: LPHTRVVSLGLP*PAEAKRPRQGP
Trigger: TGGGCCCTGCCGGGGGCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp TGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTaGGTCTCCCATGGCCCGCTGAGGCCAAGCGCCCCC +
Preference number: 3 (lower is better)
Translates to: WQDHCLTLESFP*VSHGPLRPSAP
Trigger: GGGGGCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp CCTCACGGGAGGGTTGGAGGTGGGGAACACGAGGCCTaGGCCTCTGGGAGGCTGGCTTCTCACTCCCCAAGT +
Preference number: 3 (lower is better)
Translates to: PHGRVGGGEHEA*ASGRLASHSPS
Trigger: ACTTGGGGAGTGAGAAGCCAGCCTCCCAGAGGCCCAGGCCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp CGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTaGCGCGATGGAAGACTGCTCCAAGGGCAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: RYPPSGLPSHGQ*RDGRLLQGQGD
Trigger: GTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp GAGGGTTGGAGGTGGGGAACACGAGGCCTGGGCCTCTaGGAGGCTGGCTTCTCACTCCCCAAGTTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: EGWRWGTRGLGL*EAGFSLPKFAS
Trigger: GGAGGCAAACTTGGGGAGTGAGAAGCCAGCCTCCCAGAGGCCCAGGCCTCGTGTTCCCCACCTCCAACCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp TCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTaGAGCTTTGCCGTGAACAAGCTCCTGCCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: SAPQGLASLGEG*SFAVNKLLPQE
Trigger: CTCCTGGGGCAGGAGCTTGTTCACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp GGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATaGGGTCGAGTTAGGAAGGGCCCTGGTCACCCCTCT +
Preference number: 3 (lower is better)
Translates to: GQPPSQGSHQTT*GRVRKGPGHPS
Trigger: AGAGGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGGCTCACTCCAGGTCTTaGCCCAGAGTAAAAGCTCAC +
Preference number: 3 (lower is better)
Translates to: SQWGWPGEARWPLTATVRAHSRS*PRVKAH
Trigger: GTGAGCTTTTACTCTGGGCAAAGACCTGGAGTGAGC...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp GCGCATCCCTTTCTGCACACAGGAGTCCACCGTGCGTaGGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: AHPFLHTGVHRA*ALGTALCPSCP
Trigger: AGGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTGTGCAGAAAGGGATGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp GGCTCCCCTCCCACGGACAGTGACGCGATGGAAGACTaGTCCAAGGGCAGGGTGACTGGATGGAACTGGCAA +
Preference number: 3 (lower is better)
Translates to: GSPPTDSDAMED*SKGRVTGWNWQ
Trigger: TTGCCAGTTCCATCCAGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCGTGGGAGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp TGGTGCGCATCCCTTTCTGCACACAGGAGTCCACCGTaGGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: WCASLSAHRSPP*VSVRYSPLSLL
Trigger: CAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTGTGCAGAAAGGGATGCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGTTCTCCAAGAAGCCATaGGCGATACCCACCCTCAGG +
Preference number: 3 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAEFSKKP*AIPTLR
Trigger: CCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAA...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp GGTCATCCGAAGCCACCCAAAGGGTTATCCGAAGCCTaGAACTCCACCTGCCCTCCTGGAATCTCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: GHPKPPKGLSEA*NSTCPPGISAG
Trigger: GCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCTTCGGATGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp AAGGGCCCTGGTCACCCCTCTAAGCCTGCAGCTCACTaGTGGCCCCTCCCTGTCAAATGGCTAAAGGAGATG +
Preference number: 3 (lower is better)
Translates to: KGPGHPSKPAAH*WPLPVKWLKEM
Trigger: CATCTCCTTTAGCCATTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGGCTTAGAGGGGTGACCAGGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp GAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTaGCGATACCCACCCTCAGGGCTCCCCTCCCACGGA +
Preference number: 3 (lower is better)
Translates to: ESQQATCSPRSH*RYPPSGLPSHG
Trigger: TCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp AGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTaGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: RVIRSLQLHLPS*NLSRPHVLQEA
Trigger: GGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp GCACCTTCCCACCCCTCCTTCACTCTCAGATACATATaGGAAACAGCCCTGCTCTGTCAGCCTAGATGGGGC +
Preference number: 3 (lower is better)
Translates to: APSHPSFTLRYI*ETALLCQPRWG
Trigger: GCCCCATCTAGGCTGACAGAGCAGGGCTGTTTCTCATATGTATCTGAGAGTGAAGGAGGGGTGGGAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp CTCACAGAGGAGAGCCTTGGCCCAAGTCTGGACCAATaGCCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: LTEESLGPSLDQ*PGLLKCPSLGC
Trigger: ACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp TTGAGTGGAGACAGCATGGAGATTCTTGGCCCTGTCTaGTGGTGCGCATCCCTTTCTGCACACAGGAGTCCA +
Preference number: 3 (lower is better)
Translates to: LSGDSMEILGPV*WCASLSAHRSP
Trigger: TGGACTCCTGTGTGCAGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTGTCTCCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp ACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTaGACCAATGACCAGGTCTTCTTAAGTGCCCATCTC +
Preference number: 3 (lower is better)
Translates to: THPSQRRALAQV*TNDQVFLSAHL
Trigger: GAGATGGGCACTTAAGAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCTTCTCCAAGAAGCCATaGGCGATACCCACCCTCAGG +
Preference number: 3 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLFSKKP*AIPTLR
Trigger: CCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAA...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp TGCGCATCCCTTCTGAGAAAGCGGGAGTCACAGCCCTaGGGTTTTGAGTGGAGACAGCATGGAGATTCTTGG +
Preference number: 3 (lower is better)
Translates to: CASLLRKRESQP*GFEWRQHGDSW
Trigger: CCAAGAATCTCCATGCTGTCTCCACTCAAAACCTCAGGGCTGTGACTCCCGCTTTCTCAGAAGGGATGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp CCTCCTTCACTCTCAGATACATATGAGAAACAGCCCTaGTCTGTCAGCCTAGATGGGGCTCATCCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: PPSLSDTYEKQP*SVSLDGAHPQP
Trigger: AGGCTGGGGATGAGCCCCATCTAGGCTGACAGAGCAGGGCTGTTTCTCATATGTATCTGAGAGTGAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp GGGAAATGTGAGGCTGGGGCCTCCCATAGAGACCAGTaGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: GKCEAGASHRDQ*FVQAPVQMAVK
Trigger: TTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGGTCTCTATGGGAGGCCCCAGCCTCACATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp GCTGGCTGGAGGGATGTTAAAGTGCTTGGTGGAGACTaGTCCCTTCAGTGTGCTAAACATGGCCCTGATAGC +
Preference number: 3 (lower is better)
Translates to: AGWRDVKVLGGD*SLQCAKHGPDS
Trigger: GCTATCAGGGCCATGTTTAGCACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTCACAGCCCTGAGGTTTaGAGTGGAGACAGCATGGAG +
Preference number: 3 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSHSPEV*SGDSME
Trigger: CTCCATGCTGTCTCCACTCAAAACCTCAGGGCTGTG...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAAGCTTACAAAGAGGGTTaGTCAGTCACTGGCAGGACC +
Preference number: 3 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKAYKEG*SVTGRT
Trigger: GGTCCTGCCAGTGACTGACAAACCCTCTTTGTAAGC...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp TTACAAAGAGGGTTTGTCAGTCACTGGCAGGACCACTaGCTCACACTAGAGTCGTTTCCCTGGGTCTCCCAT +
Preference number: 3 (lower is better)
Translates to: LQRGFVSHWQDH*LTLESFPWVSH
Trigger: ATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAGTGACTGACAAACCCTCTTTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp CAAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTaGCGCAGATTGGAACAAAGAGAAAACTGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: QVHTARKVGLPR*RRLEQRENCGL
Trigger: GAGACCACAGTTTTCTCTTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTGCTCACTCCAGGTCTTaGCCCAGAGTAAAAGCTCAC +
Preference number: 3 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTAHSRS*PRVKAH
Trigger: GTGAGCTTTTACTCTGGGCAAAGACCTGGAGTGAGC...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGCTTACAAAGAGGGTTaGTCAGTCACTGGCAGGACC +
Preference number: 3 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSAYKEG*SVTGRT
Trigger: GGTCCTGCCAGTGACTGACAAACCCTCTTTGTAAGC...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CCA 72 bp TGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTaGAGGGATGTTAAAGTGCTTGGTGGAGACTGGTCC +
Preference number: 3 (lower is better)
Translates to: CPLCNTRSIYAG*RDVKVLGGDWS
Trigger: GGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp AATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGACCCAGGAATAGAGACCAGTGGTTaGTCCAGGCTCCAGTACAGA +
Preference number: 3 (lower is better)
Translates to: NDQVFLSAHLWAVILDPGIETSG*SRLQYR
Trigger: TCTGTACTGGAGCCTGGACAAACCACTGGTCTCTAT...TCCTGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp CGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTaGTTGGTGGAGACTGGTCCCTTCAGTGTGCTAAAC +
Preference number: 3 (lower is better)
Translates to: RDQSMLAGGMLK*LVETGPFSVLN
Trigger: GTTTAGCACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR GCA 72 bp CCTTCTATCTTTTGTGACAGGATAGCTCACTTAACTTaGAAGGAAGTTACAAGGTCCCAGGCCAAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: PSIFCDRIAHLT*KEVTRSQAKPL
Trigger: GAGGGGCTTGGCCTGGGACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTATCCTGTCACAAAAGATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR-3UTR CAA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTGATAGCTCACTTAACTaGCAAGGAAGTTACAAGGTC +
Preference number: 3 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLDSSLN*QGSYKV
Trigger: GACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTATC...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp CACTCACTCAACATAAAACCAGTGCTGGGTTTCCAGTaGAAAGAAGTCCCAAAGGGCAGTTCCTTCTATCTT +
Preference number: 3 (lower is better)
Translates to: HSLNIKPVLGFQ*KEVPKGSSFYL
Trigger: AAGATAGAAGGAACTGCCCTTTGGGACTTCTTTTCACTGGAAACCCAGCACTGGTTTTATGTTGAGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp AAAGAAGTCCCAAAGGGCAGTTCCTTCTATCTTTTGTaGCAGGATAGCTCACTTAACTTGCAAGGAAGTTAC +
Preference number: 3 (lower is better)
Translates to: KEVPKGSSFYLL*QDSSLNLQGSY
Trigger: GTAACTTCCTTGCAAGTTAAGTGAGCTATCCTGTCACAAAAGATAGAAGGAACTGCCCTTTGGGACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR TCA 72 bp GTGGCTTCTGCTTCAATAAGAGAAGTTCATGCAAAATaGACTTGTTCTATAACAGAGTTCAGTAGATTCATT +
Preference number: 3 (lower is better)
Translates to: VASASIREVHAK*TCSITEFSRFI
Trigger: AATGAATCTACTGAACTCTGTTATAGAACAAGTTCATTTTGCATGAACTTCTCTTATTGAAGCAGAAGCCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGAGGCAAGGTGGCCCCTaGCAGCCACGGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDARQGGP*QPRSGP
Trigger: TGGCCCTGACCGTGGCTGTCAGGGGCCACCTTGCCT...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGCGGGCCCGGCCCTTGTaGGTGGAGGGTCGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVRARPL*VEGRCA
Trigger: TGCGCAACGACCCTCCACTCACAAGGGCCGGGCCCG...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGACGGCCTTCCGACTCTaGCAGCTCCTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SQWGWPGEARWPLTATVRTAFRL*QLLPTA
Trigger: GGCAGTGGGAAGGAGCTGCCAGAGTCGGAAGGCCGT...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGCCTGCGCATCCCTTCTaGGAAAGCGGGAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SQWGWPGEARWPLTATVRPAHPF*ESGSHS
Trigger: GCTGTGACTCCCGCTTTCTCAGAAGGGATGCGCAGG...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCCTCCTGGAGGGCCTCTaGCCCTCCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPLLEGL*PSPLWL
Trigger: CAGCCAGAGAGGGGAGGGGCAGAGGCCCTCCAGGAG...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGAGCGCCCACAGCTGCTaGTGCACCAGCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDASAHSC*CTSHTL
Trigger: GAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCT...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGACGGACAGACACCACTaGCCGCTAGCACCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SQWGWPGEARWPLTATVRTDRHH*PLAPSS
Trigger: TGAGCTGGGTGCTAGCGGCCAGTGGTGTCTGTCCGT...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGGCCTCGGACTTGGCATaGCTGAGGGGCCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDAASDLA*LRGRRV
Trigger: GACTCTCCGGCCCCTCAGCCATGCCAAGTCCGAGGC...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGCGCCCCCGGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGCCTGGTGAGGCAAGGTaGCCCCTGACAGCCACGGTC +
Preference number: 4 (lower is better)
Translates to: QAPPAGPTSGPPFDGSAVPGEAR*PLTATV
Trigger: GACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGG...CACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCCGGGGGCGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGCCGGGCTGGGGGCGCTaGATCCCCCGCGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQPGWGR*IPRASL
Trigger: GAGTGAGGCGCGGGGGATTCAGCGCCCCCAGCCCGG...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCCGGGCTGGGGGCGCTaGATCCCCCGCGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESPGWGR*IPRASL
Trigger: GAGTGAGGCGCGGGGGATTCAGCGCCCCCAGCCCGG...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCCCTAGGGGGAAGGGGTaGGCCTGCGCATCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPPRGKG*ACASLL
Trigger: CAGAAGGGATGCGCAGGCTCACCCCTTCCCCCTAGG...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGCAGGCTGGGGAACTCTaGCGGCAGGTGCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDAQAGEL*RQVLQA
Trigger: TGCTTGGAGCACCTGCCGGCAGAGTTCCCCAGCCTG...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGGTGCGCATCCCTTTCTaGACACAGGAGTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: SQWGWPGEARWPLTATVRVRIPF*TQESTV
Trigger: CACGGTGGACTCCTGTGTGCAGAAAGGGATGCGCAC...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCTGGGCAGGGCTCTaGCTGTGCCCGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQGSHQTTCGRVRKGPGHPWAGL*LCPLLR
Trigger: CCTGAGGAGCGGGCACAGCCAGAGCCCTGCCCAGGG...GTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCCCAGGCCCCCAGAGCTaGACAGTGGCTTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPPGPQS*TVASGA
Trigger: TGCCCCTGAAGCCACTGTCCAGCTCTGGGGGCCTGG...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGCGAGGCCTGGGCCTCTaGGAGGCTGGCTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVRGLGL*EAGFSL
Trigger: GAGTGAGAAGCCAGCCTCCCAGAGGCCCAGGCCTCG...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGATGCGCCTCAGGGCATaGGCCATCAGCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDAMRLRA*AISSTS
Trigger: TGAGGTGCTGCTGATGGCTCATGCCCTGAGGCGCAT...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGGGAGTCCACCGTGCGTaGGCGTTAGGTACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVGVHRA*ALGTAL
Trigger: GAGGGCTGTACCTAACGCTCACGCACGGTGGACTCC...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCGGAGTCCACCGTGCGTaGGCGTTAGGTACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPGVHRA*ALGTAL
Trigger: GAGGGCTGTACCTAACGCTCACGCACGGTGGACTCC...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGCGGCACAGCAGCAGGTaGAGGATCTGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDARHSSR*RIWTSP
Trigger: AGGAGAGGTCCAGATCCTGCACCTGCTGCTGTGCCG...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACAGGAGGCGCTCAGGGTaGTTCGGGCCCGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SQGSHQTTCGRVRKGPGHRRRSG*FGPGPC
Trigger: ACAAGGGCCGGGCCCGAACCACCCTGAGCGCCTCCT...GTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGCGCCCCCGGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGGAAGAGCTTGCTGGCTaGGCTCCGTGGGTTTCGAGC +
Preference number: 4 (lower is better)
Translates to: QAPPAGPTSGPPFDGSAVEELAG*APWVSS
Trigger: GCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTC...CACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCCGGGGGCGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCACATGTTCTTCCCCAGGCGGGCATaGCGGGCACGGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: SEACNSTCPPGISAGHMFFPRRA*RARPSD
Trigger: GTCGGAAGGCCGTGCCCGCCATGCCCGCCTGGGGAA...GAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGTCTCCAAGAAGCCATTaGCGATACCCACCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SQWGWPGEARWPLTATVRSPRSH*RYPPSG
Trigger: CCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGA...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGCTAGAGTCGTTTCCCTaGGTCTCCCATGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDALESFP*VSHGPL
Trigger: CAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAG...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCCGAGGCCTGGGCCTCTaGGAGGCTGGCTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPRGLGL*EAGFSL
Trigger: GAGTGAGAAGCCAGCCTCCCAGAGGCCCAGGCCTCG...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp TCCCAGTGGGGCTGGCCTGGTGAGGCAAGGTGGCCCCTGACAGCCACGGTCAGGTTACTCGAGGACAAGTaGCACTGGACCGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SQWGWPGEARWPLTATVRLLEDK*HWTGVS
Trigger: AGACACTCCGGTCCAGTGTCACTTGTCCTCGAGTAA...CCTGACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGGCCAGCCCCACTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCGGACTTGGCATGGCTaGGGGGCCGGAGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVARTWHG*GAGESG
Trigger: CCCGGACTCTCCGGCCCCTCAGCCATGCCAAGTCCG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGCCCTCCCACGGACAGTaGCGCGATGGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAEPSHGQ*RDGRLL
Trigger: GAGCAGTCTTCCATCGCGTCACTGTCCGTGGGAGGG...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCCCTGCGCATCCCTTCTaGGAAAGCGGGAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPPAHPF*ESGSHS
Trigger: GCTGTGACTCCCGCTTTCTCAGAAGGGATGCGCAGG...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCTGCGAATGGCCTTCTTaGGCACCAGCGTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPCEWPS*APAWAS
Trigger: GCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCA...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGGTGCGCATCCCTTTCTaGACACAGGAGTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDAVRIPF*TQESTV
Trigger: CACGGTGGACTCCTGTGTGCAGAAAGGGATGCGCAC...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CAAGCGCCCCCGGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGCTGCTCTGGTGGGACTaGCCAGTTCCTTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: QAPPAGPTSGPPFDGSAVLLWWD*PVPSRS
Trigger: ACTCCTGGAAGGAACTGGGCAGTCCCACCAGAGCAG...CACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCCGGGGGCGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGAGCCACACGCTCTCCTaGGTGTCCAGGTCATCCACA +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDASHTLS*VSRSST
Trigger: TGTGGATGACCTGGACACCCAGGAGAGCGTGTGGCT...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGCGGCAGGGCACCAGGTaGAGTAGAGTATGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVRQGTR*SRVCAS
Trigger: TGAGGCGCATACTCTACTCCACCTGGTGCCCTGCCG...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCTCTTGCGCACCAGCGTaGGCGAGCAGTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPSCAPA*ASSRDS
Trigger: GGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGA...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGTGGTTCCGGAAGACCTaGTGGGGCACCACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRWFRKT*WGTTPH
Trigger: GTGCGGCGTGGTGCCCCACCAGGTCTTCCGGAACCA...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGCCCCCGCCTTCTGCATaGCCCCCAGGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQPPPSA*PPGCLA
Trigger: AGCCAGGCACCCTGGGGGCCATGCAGAAGGCGGGGG...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR TCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCTCTCCGTTCCCAGTGTaGAGGATCGAGCCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPSPFPV*RIEPGS
Trigger: CGAGCCAGGCTCGATCCTTCACACTGGGAACGGAGA...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCCGGACTTGGCATGGCTaGGGGGCCGGAGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPRTWHG*GAGESG
Trigger: CCCGGACTCTCCGGCCCCTCAGCCATGCCAAGTCCG...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGCCCACCAGCCCCTCTaGTGGCAGCCGCCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PKGLSEACNSTCPPGISAAHQPL*WQPPKG
Trigger: TCCTTTCGGCGGCTGCCAGCAGAGGGGCTGGTGGGC...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCCCCAGCCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGCTGGGTCTCATAGGTaGAGCCGCGGTAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SPASCPQAPWSHLCSHRQAGSHR*SRGRPP
Trigger: CGGGGGCCTACCGCGGCTGCACCTATGAGACCCAGC...CTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGGCTGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTGCTGGGTCTCATAGGTaGAGCCGCGGTAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESAGSHR*SRGRPP
Trigger: CGGGGGCCTACCGCGGCTGCACCTATGAGACCCAGC...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTGGGCCATGCCTCCCATaGGGCAGGAAAGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESGPCLP*GRKGLP
Trigger: CGGGAGGCCTTTCCTGCCGCATGGGAGGCATGGCCC...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCTGGACCTCTCCTGGCTaGCTGCCCACAAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPWTSPG*LPTKRW
Trigger: CCACCTCTTTGTGGGCAGCCAGCCAGGAGAGGTCCA...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCGATCTGGACCTCTCCTaGCTGGCTGCCCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPDLDLS*LAAHKE
Trigger: CTCTTTGTGGGCAGCCAGCCAGGAGAGGTCCAGATC...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCCAGGGCACAGGGCCTaGAGATGCCAGCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVAPGHRA*RCQRRP
Trigger: GGGCCTTCGCTGGCATCTCCAGGCCCTGTGCCCTGG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGCCAGGGCACAGGGCCTaGAGATGCCAGCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQPGHRA*RCQRRP
Trigger: GGGCCTTCGCTGGCATCTCCAGGCCCTGTGCCCTGG...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCCTCCACCTGCCCTCCTaGAATCTCAGCAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPLHLPS*NLSRPH
Trigger: ATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAG...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCGGGCCTCTGGGAGGCTaGCTTCTCACTCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPGPLGG*LLTPQV
Trigger: AACTTGGGGAGTGAGAAGCCAGCCTCCCAGAGGCCC...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTGGGGAACACGAGGCCTaGGCCTCTGGGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVAGEHEA*ASGRLA
Trigger: AGCCAGCCTCCCAGAGGCCCAGGCCTCGTGTTCCCC...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCGGGAGGGTTGGAGGTaGGGAACACGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVAREGWR*GTRGLG
Trigger: GCCCAGGCCTCGTGTTCCCCACCTCCAACCCTCCCG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACTCCTCACGGGAGGGTTaGAGGTGGGGAACACGAGGC +
Preference number: 4 (lower is better)
Translates to: SQGSHQTTCGRVRKGPGHSSREG*RWGTRG
Trigger: GCCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGGA...GTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGCACAGAGGAGAGCCTTaGCCCAAGTCTGGACCAATG +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDAHRGEP*PKSGPM
Trigger: CATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTG...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTGCCCACAGCTGCTGCTaGACCAGCCACACGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESAHSCC*TSHTLS
Trigger: GGAGAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGC...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCCCGAGCGGATCACCTTaGTGCGAATGGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPPSGSP*CEWPSC
Trigger: GCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGG...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGAGTCCGGGGCGGCCTaGCTGGGGGCCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSESGAA*LGAHSP
Trigger: AGGACTGTGGGCCCCCAGGCAGGCCGCCCCGGACTC...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGGACGCGATGGAAGACTaGTCCAAGGGCAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAEDAMED*SKGRVT
Trigger: AGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTC...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGTCCTTAGGAGAGGGCTaGAGCTTTGCCGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDASLGEG*SFAVNK
Trigger: CTTGTTCACGGCAAAGCTGCAGCCCTCTCCTAAGGA...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGCACAGGAGTCCACCGTaGGTGAGCGTTAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAEHRSPP*VSVRYS
Trigger: GCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGGACCAAGGAGGCGCTCAGGGTaGTTCGGGCCCGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPVKPIPHRGEPWPKSGPRRRSG*FGPGPC
Trigger: ACAAGGGCCGGGCCCGAACCACCCTGAGCGCCTCCT...TGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGGGCAGAAGAGCTTGCTaGCTGGGCTCCGTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRGRRAC*LGSVGF
Trigger: GAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCC...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCCAGCCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGCCAGGCCCCCAGAGCTaGACAGTGGCTTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SPASCPQAPWSHLCSHRQPGPQS*TVASGA
Trigger: TGCCCCTGAAGCCACTGTCCAGCTCTGGGGGCCTGG...CTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGGCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCTTCCCCAGGCGGGCATaGCGGGCACGGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLFPRRA*RARPSD
Trigger: GTCGGAAGGCCGTGCCCGCCATGCCCGCCTGGGGAA...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGTCACCTTGCTGCGAATaGCCTTCTTGCGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAESPCCE*PSCAPA
Trigger: CGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGA...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAATCCACCAGGCACGAGTaGCCACCAGGACCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKSTRHE*PPGPRG
Trigger: GCCCCGGGGTCCTGGTGGCCACTCGTGCCTGGTGGA...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTTTCCGGAAGACCTGGTaGGGCACCACGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESFRKTW*GTTPHC
Trigger: GCAGTGCGGCGTGGTGCCCCACCAGGTCTTCCGGAA...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCCGTTCAGTAACCGCGTaGTTCTCCACCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPRSVTA*FSTRAS
Trigger: GGAGGCTCTGGTGGAGAACCACGCGGTTACTGAACG...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGCACAGAGGAGAGCCTTaGCCCAAGTCTGGACCAATG +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVHRGEP*PKSGPM
Trigger: CATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTG...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CAA 72 bp GGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATaGGCGATACCCACCCTCAGGGCTCCCCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GISAGHMFSKKP*AIPTLRAPLPR
Trigger: CCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGTTACTCGAGGACAAGTaGCACTGGACCGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVLLEDK*HWTGVS
Trigger: AGACACTCCGGTCCAGTGTCACTTGTCCTCGAGTAA...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp TCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACGTGGGTTTCGAGCCATaGAGGCAAACTGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SQGSHQTTCGRVRKGPGHVGFEP*RQTGSR
Trigger: CCGACTGCCAGTTTGCCTTCATGGCTCGAAACCCAC...GTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCAGGCAAGGTGGCCCCTaGCAGCCACGGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLRQGGP*QPRSGP
Trigger: TGGCCCTGACCGTGGCTGTCAGGGGCCACCTTGCCT...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGGTGGCAGAAGAGCTTaGTGGCTGGGCTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQGGRRA*WLGSVG
Trigger: ACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACC...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTTGCGAATGGCCTTCTTaGGCACCAGCGTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESCEWPS*APAWAS
Trigger: GCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCA...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTTGTTCTCCGTCAGGCTaGCCTCGCTCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESCSPSG*PRSPPG
Trigger: GCCTGGTGGAGAGCGAGGGCAGCCTGACGGAGAACA...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCCCACGCCGCACTGCGTaGGCACGGACAGACACCACT +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPPRRTA*ARTDTT
Trigger: AGTGGTGTCTGTCCGTGCGCACGCAGTGCGGCGTGG...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAAGAGTCCGGGGCGGCCTaGCTGGGGGCCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQESGAA*LGAHSP
Trigger: AGGACTGTGGGCCCCCAGGCAGGCCGCCCCGGACTC...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGCAGGCCCTGCAGCTCTaGCTCGGACTTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQQALQL*LGLGMA
Trigger: AGCCATGCCAAGTCCGAGGCAGAGCTGCAGGGCCTG...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCAGCCACCAAACCACATaGGGTCGAGTTAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPSHQTT*GRVRKG
Trigger: GCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCT...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCTGCCTCCTTTCTTTCTaGTCTGGTGGGACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPCLLSF*SGGTAQ
Trigger: CTGGGCAGTCCCACCAGAGCAGAAAGAAAGGAGGCA...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTCCAGCCCCCGCCTTCTaGATGGCCCCCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSPAPAF*MAPRVP
Trigger: AGGCACCCTGGGGGCCATGCAGAAGGCGGGGGCTGG...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCCAGCCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGTGAAGGATCGAGCCTaGCTCGGAGGAGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPASCPQAPWSHLCSHRQVKDRA*LGGGAQ
Trigger: CTGAGCGCCTCCTCCGAGCCAGGCTCGATCCTTCAC...CTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCTGGGCAGGGCTCTaGCTGTGCCCGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLPWAGL*LCPLLR
Trigger: CCTGAGGAGCGGGCACAGCCAGAGCCCTGCCCAGGG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTCCACCAGGCACGAGTaGCCACCAGGACCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTSTRHE*PPGPRG
Trigger: GCCCCGGGGTCCTGGTGGCCACTCGTGCCTGGTGGA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCACCTGCTCCTCGTAGGTaGGGTTCAGGCGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: PKGLSEACNSTCPPGISAPAPRR*GSGGPC
Trigger: ACATGGGCCGCCTGAACCCCACCTACGAGGAGCAGG...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCCCCCTCCCTGTCAAATaGCTAAAGGAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPPLPVK*LKEMSW
Trigger: CCAGCTCATCTCCTTTAGCCATTTGACAGGGAGGGG...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAATCCCTGGGTCTCCCATaGCCCGCTGAGGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKSLGLP*PAEAKR
Trigger: GCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGA...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCCGGGAGGGTTGGAGGTaGGGAACACGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLREGWR*GTRGLG
Trigger: GCCCAGGCCTCGTGTTCCCCACCTCCAACCCTCCCG...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGTCCTCACGGGAGGGTTaGAGGTGGGGAACACGAGGC +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQSSREG*RWGTRG
Trigger: GCCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGGA...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGGGCCCCCAGGGTGCCTaGCTTCCAGCTCCACGGGAG +
Preference number: 4 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGGPQGA*LPAPRE
Trigger: CTCCCGTGGAGCTGGAAGCCAGGCACCCTGGGGGCC...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR CCA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGAAGGAGCCCACGTACTaGGCAAACTTGGTGATGCAC +
Preference number: 4 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVKEPTY*ANLVMH
Trigger: GTGCATCACCAAGTTTGCCCAGTACGTGGGCTCCTT...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR TCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCCGGTTCTGCTGTGACTaGCCCCATTCCCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPRFCCD*PHSQWG
Trigger: GCCCCACTGGGAATGGGGTCAGTCACAGCAGAACCG...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp TCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCACATGTTCTCGACGGTTCTGCTGTaGCTGACCCCATTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SEACNSTCPPGISAGHMFSTVLL*LTPFPV
Trigger: CACTGGGAATGGGGTCAGTCACAGCAGAACCGTCGA...GAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGACTGGGCAAACTTGGTaGTGCACCTGGGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQTGQTW*CTWAGE
Trigger: CTCACCGGCCCAGGTGCATCACCAAGTTTGCCCAGT...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCTCCTGGAGGGCCTCTaGCCCTCCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLLLEGL*PSPLWL
Trigger: CAGCCAGAGAGGGGAGGGGCAGAGGCCCTCCAGGAG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGGGCCATGCCTCCCATaGGGCAGGAAAGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSGPCLP*GRKGLP
Trigger: CGGGAGGCCTTTCCTGCCGCATGGGAGGCATGGCCC...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCACACAGGGCCTGGAGATaGCAGCGAAGGCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: PKGLSEACNSTCPPGISAHRAWR*QRRPRC
Trigger: ACATCTGGGCCTTCGCTGGCATCTCCAGGCCCTGTG...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTGGACCACAGGCCCTGCAGCTCTaGCTCGGACTTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SPVKPIPHRGEPWPKSGPQALQL*LGLGMA
Trigger: AGCCATGCCAAGTCCGAGGCAGAGCTGCAGGGCCTG...TGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCACATGTTCCACAGGAGTCCACCGTaGGTGAGCGTTAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: SEACNSTCPPGISAGHMFHRSPP*VSVRYS
Trigger: GCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG...GAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCACATGTTCAAGCCTGCAGCTCACTaGTGGCCCCTCCCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SEACNSTCPPGISAGHMFKPAAH*WPLPVK
Trigger: TTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGGCTT...GAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCGGCAGGGCACCAGGTaGAGTAGAGTATGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVARQGTR*SRVCAS
Trigger: TGAGGCGCATACTCTACTCCACCTGGTGCCCTGCCG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGTCTTGCGCACCAGCGTaGGCGAGCAGTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQSCAPA*ASSRDS
Trigger: GGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGA...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCCTGCAGCTCACTGCTaGCCCCTCCCTGTCAAATGG +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESPAAHC*PLPVKW
Trigger: CCATTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGG...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGGGGAGAGCCTGGTGAGGCAAGGTaGCCCCTGACAGCCACGGTC +
Preference number: 4 (lower is better)
Translates to: ICDFQGTEQFCPTPRRGEPGEAR*PLTATV
Trigger: GACCGTGGCTGTCAGGGGCCACCTTGCCTCACCAGG...CTCTCCCCGTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCCATTCCCAGTGGGGCTaGCCTGGTGAGGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPHSQWG*PGEARW
Trigger: CCACCTTGCCTCACCAGGCCAGCCCCACTGGGAATG...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACGCCTTGGCCCAAGTCTaGACCAATGACCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SQGSHQTTCGRVRKGPGHALAQV*TNDQVF
Trigger: GAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGC...GTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGCGAGGTGGCGCAGATTaGAACAAAGAGAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDARGGAD*NKEKTV
Trigger: CACAGTTTTCTCTTTGTTCCAATCTGCGCCACCTCG...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGACTCTCAGATACATATaGGAAACAGCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDATLRYI*ETALLC
Trigger: ACAGAGCAGGGCTGTTTCTCATATGTATCTGAGAGT...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCGGGAGTCACAGCCCTaGGGTTTTGAGTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVARESQP*GFEWRQ
Trigger: CTGTCTCCACTCAAAACCTCAGGGCTGTGACTCCCG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCTAGGGGGAAGGGGTaGGCCTGCGCATCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLPRGKG*ACASLL
Trigger: CAGAAGGGATGCGCAGGCTCACCCCTTCCCCCTAGG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAACGGTTCTGCTGTGACTaGCCCCATTCCCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKRFCCD*PHSQWG
Trigger: GCCCCACTGGGAATGGGGTCAGTCACAGCAGAACCG...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTAGCGCCCACAGCTGCTaGTGCACCAGCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTSAHSC*CTSHTL
Trigger: GAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCT...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGACCCAGGAGGCACCACGCCGCACTaGGTGCGCACGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: NDQVFLSAHLWAVILDPGGTTPH*VRTDRH
Trigger: GTGTCTGTCCGTGCGCACGCAGTGCGGCGTGGTGCC...TCCTGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAAGGCACCACGCCGCACTaGGTGCGCACGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQGTTPH*VRTDRH
Trigger: GTGTCTGTCCGTGCGCACGCAGTGCGGCGTGGTGCC...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTGACGCGATGGAAGACTaGTCCAAGGGCAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESDAMED*SKGRVT
Trigger: AGTCACCCTGCCCTTGGAGCAGTCTTCCATCGCGTC...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGAGAGGGCTGCAGCTTTaGCGTGAACAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQRGLQL*REQAPA
Trigger: GGCAGGAGCTTGTTCACGGCAAAGCTGCAGCCCTCT...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCACATGTTCAGCCACCAAACCACATaGGGTCGAGTTAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SEACNSTCPPGISAGHMFSHQTT*GRVRKG
Trigger: GCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCT...GAACATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCACCAGCCCCTCTGCTaGCAGCCGCCGAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLHQPLC*QPPKGD
Trigger: GTCTCCTTTCGGCGGCTGCCAGCAGAGGGGCTGGTG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACACCAGAGCCTCCAGGCTaGGGAACTCTGCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTPEPPG*GTLPAG
Trigger: ACCTGCCGGCAGAGTTCCCCAGCCTGGAGGCTCTGG...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCGTTCAGTAACCGCGTaGTTCTCCACCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVARSVTA*FSTRAS
Trigger: GGAGGCTCTGGTGGAGAACCACGCGGTTACTGAACG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGCAGCATGGAGATTCTTaGCCCTGTCTGCTGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQQHGDS*PCLLVR
Trigger: GCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTG...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAAGGGGAACACGAGGCCTaGGCCTCTGGGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLPSSFQESEICDFQGTEGEHEA*ASGRLA
Trigger: AGCCAGCCTCCCAGAGGCCCAGGCCTCGTGTTCCCC...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp ATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGGGGAGAGGCTCCAAGGGCAGGGTaGCTGGATGGAACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: ICDFQGTEQFCPTPRRGEAPRAG*LDGTGN
Trigger: GTTGCCAGTTCCATCCAGTCACCCTGCCCTTGGAGC...CTCTCCCCGTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAACGGCACAGCAGCAGGTaGAGGATCTGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKRHSSR*RIWTSP
Trigger: AGGAGAGGTCCAGATCCTGCACCTGCTGCTGTGCCG...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTGTTCTCCGTCAGGCTaGCCTCGCTCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTCSPSG*PRSPPG
Trigger: GCCTGGTGGAGAGCGAGGGCAGCCTGACGGAGAACA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCAGGCTGGGGAACTCTaGCGGCAGGTGCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLQAGEL*RQVLQA
Trigger: TGCTTGGAGCACCTGCCGGCAGAGTTCCCCAGCCTG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACAACGGCCTTCCGACTCTaGCAGCTCCTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTTAFRL*QLLPTA
Trigger: GGCAGTGGGAAGGAGCTGCCAGAGTCGGAAGGCCGT...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATGGTTCCGGAAGACCTaGTGGGGCACCACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQWFRKT*WGTTPH
Trigger: GTGCGGCGTGGTGCCCCACCAGGTCTTCCGGAACCA...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACCAGAGCCTCCAGGCTaGGGAACTCTGCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: NDQVFLSAHLWAVILDPGPEPPG*GTLPAG
Trigger: ACCTGCCGGCAGAGTTCCCCAGCCTGGAGGCTCTGG...TCCTGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCTGCTCCTCGTAGGTaGGGTTCAGGCGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLPAPRR*GSGGPC
Trigger: ACATGGGCCGCCTGAACCCCACCTACGAGGAGCAGG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGGCCTCGGACTTGGCATaGCTGAGGGGCCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPSSFQESEICDFQGTEQASDLA*LRGRRV
Trigger: GACTCTCCGGCCCCTCAGCCATGCCAAGTCCGAGGC...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTCCAAAACCCTCTTTCTaGAGACTCCCAGTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PPAHKLHGVISALIDRVAPKPSF*RLPVSA
Trigger: GGCGCTGACTGGGAGTCTCCAGAAAGAGGGTTTTGG...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACTCCCATAGAGACCAGTaGTTTGTCCAGGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SQGSHQTTCGRVRKGPGHSHRDQ*FVQAPV
Trigger: TACTGGAGCCTGGACAAACCACTGGTCTCTATGGGA...GTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGGTGCTTGGTGGAGACTaGTCCCTTCAGTGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRVLGGD*SLQCAK
Trigger: TTTAGCACACTGAAGGGACCAGTCTCCACCAAGCAC...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACATCTCCGTTCCCAGTGTaGAGGATCGAGCCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTSPFPV*RIEPGS
Trigger: CGAGCCAGGCTCGATCCTTCACACTGGGAACGGAGA...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTTCTGCAGAGCCCTTGTaGCTCCGTTGCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLSAEPL*LRCSPV
Trigger: GACAGGCGAGCAACGGAGTCACAAGGGCTCTGCAGA...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGTCACGCTTCATTCTCTaGAGAGCCCTTGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: PKGYPKPATPPALLESQQSRFIL*RALVTP
Trigger: CGGAGTCACAAGGGCTCTGCAGAGAATGAAGCGTGA...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCAGCGGATCACCTTGCTaGGAATGGCCTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPSGSPC*EWPSCA
Trigger: TGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCT...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAACCGAGCGGATCACCTTaGTGCGAATGGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKPSGSP*CEWPSC
Trigger: GCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGG...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGTTAAGACATGGAGTCTaGAAACAGGGGCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAELRHGV*KQGPKT
Trigger: GGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAA...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGACCCAGGAGTGAAGGATCGAGCCTaGCTCGGAGGAGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: NDQVFLSAHLWAVILDPGVKDRA*LGGGAQ
Trigger: CTGAGCGCCTCCTCCGAGCCAGGCTCGATCCTTCAC...TCCTGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTGCCATGAAGGCAAACTaGCAGTCGGCAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTAMKAN*QSAGHQ
Trigger: CTGGTGCCCTGCCGACTGCCAGTTTGCCTTCATGGC...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGGGGAGAGGATCTGGACCTCTCCTaGCTGGCTGCCCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: ICDFQGTEQFCPTPRRGEDLDLS*LAAHKE
Trigger: CTCTTTGTGGGCAGCCAGCCAGGAGAGGTCCAGATC...CTCTCCCCGTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGTCCCTGGGTCTCCCATaGCCCGCTGAGGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVSLGLP*PAEAKR
Trigger: GCGCTTGGCCTCAGCGGGCCATGGGAGACCCAGGGA...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTTTCTTTCTGCTCTGGTaGGACTGCCCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESFFLLW*DCPVPS
Trigger: GGAAGGAACTGGGCAGTCCCACCAGAGCAGAAAGAA...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGTTAAGTGCCCATCTCTaGGCTGTAATCCTAGACCCA +
Preference number: 4 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRLSAHL*AVILDP
Trigger: TGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAA...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGTCTCTGATTAAGACATaGAGTCTGCAAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRSLIKT*SLQTGA
Trigger: GGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGA...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACCCCTCCCACGGACAGTaGCGCGATGGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDPSHGQ*RDGRLL
Trigger: GAGCAGTCTTCCATCGCGTCACTGTCCGTGGGAGGG...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTCGGGAGTCACAGCCCTaGGGTTTTGAGTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSRESQP*GFEWRQ
Trigger: CTGTCTCCACTCAAAACCTCAGGGCTGTGACTCCCG...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCTCCTTCTATCTTTTGTaGCAGGATAGCTCACTTAAC +
Preference number: 4 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPSFYLL*QDSSLN
Trigger: GTTAAGTGAGCTATCCTGTCACAAAAGATAGAAGGA...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCACCAAGTCTGGACCAATaGCCAGGTCTTCTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: PKGLSEACNSTCPPGISAPSLDQ*PGLLKC
Trigger: GCACTTAAGAAGACCTGGTCATTGGTCCAGACTTGG...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCAGGTGGAGTAGAGTATaGGCCTCAGGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLRWSRV*ASGHEP
Trigger: TGGCTCATGCCCTGAGGCGCATACTCTACTCCACCT...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACAGCCTGCAACTCCACCTaGCCTCCTGGAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTACNST*PPGISA
Trigger: TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGC...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCCCATGGAGTCATCTCTaGTCTCATAGACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPPWSHL*SHRQGG
Trigger: GCCACCCTGTCTATGAGAGCAGAGATGACTCCATGG...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCATTCTTGGCCCTGTCTaGTGGTGCGCATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPILGPV*WCASLS
Trigger: AGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAAT...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCTGCTCTGGTGGGACTaGCCAGTTCCTTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLLLWWD*PVPSRS
Trigger: ACTCCTGGAAGGAACTGGGCAGTCCCACCAGAGCAG...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAAGGGGCCAAAAACCTTaGCCTCTCTGTAACACGAGA +
Preference number: 4 (lower is better)
Translates to: PKGLSEACNSTCPPGISARGQKP*PLCNTR
Trigger: TCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCT...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTTCCTCACTTTCTTCCTaGCGGGACGTTCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLSSLSS*RDVLSR
Trigger: CCGGCTGAGAACGTCCCGGCAGGAAGAAAGTGAGGA...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR CCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAAGGCAGAAGAGCTTGCTaGCTGGGCTCCGTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GLPSSFQESEICDFQGTEGRRAC*LGSVGF
Trigger: GAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCC...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGCACCAGCCCCTCTGCTaGCAGCCGCCGAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVHQPLC*QPPKGD
Trigger: GTCTCCTTTCGGCGGCTGCCAGCAGAGGGGCTGGTG...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGTCACCTTGCTGCGAATaGCCTTCTTGCGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGSPCCE*PSCAPA
Trigger: CGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGA...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAAACGGACAGACACCACTaGCCGCTAGCACCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLPSSFQESEICDFQGTETDRHH*PLAPSS
Trigger: TGAGCTGGGTGCTAGCGGCCAGTGGTGTCTGTCCGT...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGTTCCGGAAGACCTGGTaGGGCACCACGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVFRKTW*GTTPHC
Trigger: GCAGTGCGGCGTGGTGCCCCACCAGGTCTTCCGGAA...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp ATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGGGGAGAGTCTCCAAGAAGCCATTaGCGATACCCACCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ICDFQGTEQFCPTPRRGESPRSH*RYPPSG
Trigger: CCCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGA...CTCTCCCCGTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAACTAGAGTCGTTTCCCTaGGTCTCCCATGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQLESFP*VSHGPL
Trigger: CAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAG...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGAAGGGCCCTGGTCACCCCTCAATCTATGCTGGCTaGAGGGATGTTAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QGSHQTTCGRVRKGPGHPSIYAG*RDVKVL
Trigger: AAGCACTTTAACATCCCTCCAGCCAGCATAGATTGA...GGGGTGACCAGGGCCCTTCCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GAAGCCATTGGCGATACCCACCCTCAGGGCTCCCCTCCCACGGACAGTGACGCGACAAAGAGAAAACTGTaGTCTCTGATTAAGACATGG +
Preference number: 4 (lower is better)
Translates to: EAIGDTHPQGSPPTDSDATKRKL*SLIKTW
Trigger: CCATGTCTTAATCAGAGACCACAGTTTTCTCTTTGT...CGCGTCACTGTCCGTGGGAGGGGAGCCCTGAGGGTGGGTATCGCCAATGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGGTGGGTTTCGAGCCATaGAGGCAAACTGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: LPSSFQESEICDFQGTEQVGFEP*RQTGSR
Trigger: CCGACTGCCAGTTTGCCTTCATGGCTCGAAACCCAC...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGAGCGGATCACCTTGCTaGGAATGGCCTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGSGSPC*EWPSCA
Trigger: TGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCT...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGACCCAGGAGCCTGCAACTCCACCTaGCCTCCTGGAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NDQVFLSAHLWAVILDPGACNST*PPGISA
Trigger: TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGC...TCCTGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGGGGTTATCCGAAGCCTaGAACTCCACCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSSFQESEICDFQGTEQGLSEA*NSTCPP
Trigger: AGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCC...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AATGACCAGGTCTTCTTAAGTGCCCATCTCTGGGCTGTAATCCTAGACCCAGGAGGGTTATCCGAAGCCTaGAACTCCACCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NDQVFLSAHLWAVILDPGGLSEA*NSTCPP
Trigger: AGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCC...TCCTGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAAGAAGACCTGGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAAAGAGGGCTGCAGCTTTaGCGTGAACAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQRGLQL*REQAPA
Trigger: GGCAGGAGCTTGTTCACGGCAAAGCTGCAGCCCTCT...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTGCCTCCTTTCTTTCTaGTCTGGTGGGACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTCLLSF*SGGTAQ
Trigger: CTGGGCAGTCCCACCAGAGCAGAAAGAAAGGAGGCA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CTGGCAGGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCATAGCTCACTTAACTTaGAAGGAAGTTACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LAGPLPHTRVVSLGLPWPIAHLT*KEVTRS
Trigger: GGACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTAT...GGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGGCTGGCTGGGCTCCGTaGGTTTCGAGCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVAGWAP*VSSHEG
Trigger: GCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGC...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGAAGAGCTTGCTGGCTaGGCTCCGTGGGTTTCGAGC +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDEELAG*APWVSS
Trigger: GCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTC...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGCGGACAGTGACGCGATaGAAGACTGCTCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPSSFQESEICDFQGTEQRTVTR*KTAPRA
Trigger: TGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCG...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACTCCACCTGCCCTCCTaGAATCTCAGCAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: GLPSSFQESEICDFQGTELHLPS*NLSRPH
Trigger: ATGTGGCCTGCTGAGATTCCAGGAGGGCAGGTGGAG...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCTGCCCACAAGCTCCATaGAGTCATCTCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPCPQAP*SHLCSH
Trigger: ATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCA...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGCAGCATGGAGATTCTTaGCCCTGTCTGCTGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LPSSFQESEICDFQGTEQQHGDS*PCLLVR
Trigger: GCGCACCAGCAGACAGGGCCAAGAATCTCCATGCTG...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACCCTGCAGCTCACTGCTaGCCCCTCCCTGTCAAATGG +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDPAAHC*PLPVKW
Trigger: CCATTTGACAGGGAGGGGCCAGCAGTGAGCTGCAGG...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCTCCCATAGAGACCAGTaGTTTGTCCAGGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LESQQATCSPRSHWRYPPSHRDQ*FVQAPV
Trigger: TACTGGAGCCTGGACAAACCACTGGTCTCTATGGGA...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGGCCTTGGCCCAAGTCTaGACCAATGACCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGALAQV*TNDQVF
Trigger: GAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGC...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGCCACCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCGAGGTGGCGCAGATTaGAACAAAGAGAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: SHPKGYPKPATPPALLESRGGAD*NKEKTV
Trigger: CACAGTTTTCTCTTTGTTCCAATCTGCGCCACCTCG...AGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTGTGGGGCTACCGAGGTaGCGCAGATTGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLVGLPR*RRLEQR
Trigger: TCTTTGTTCCAATCTGCGCCACCTCGGTAGCCCCAC...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACTCGACGGTTCTGCTGTaGCTGACCCCATTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDSTVLL*LTPFPV
Trigger: CACTGGGAATGGGGTCAGTCACAGCAGAACCGTCGA...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTGTGCTGGGTTTCCAGTaGAAAGAAGTCCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLVLGFQ*KEVPKG
Trigger: GCCCTTTGGGACTTCTTTTCACTGGAAACCCAGCAC...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp GGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACTCAACAGTGCTGGGTTTCCAGTaGAAAGAAGTCCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GSSTDGCKTESQLPTHSTVLGFQ*KEVPKG
Trigger: GCCCTTTGGGACTTCTTTTCACTGGAAACCCAGCAC...TGTTGAGTGAGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGATGCACCTGGGCCGGTaGGGGGCCAGCCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQMHLGR*GASPQS
Trigger: TGACTGCGGGCTGGCCCCTCACCGGCCCAGGTGCAT...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR GCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGTCACGCTTCATTCTCTaGAGAGCCCTTGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGSRFIL*RALVTP
Trigger: CGGAGTCACAAGGGCTCTGCAGAGAATGAAGCGTGA...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GGACTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAAAGGTGGAGTAGAGTATaGGCCTCAGGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLPSSFQESEICDFQGTERWSRV*ASGHEP
Trigger: TGGCTCATGCCCTGAGGCGCATACTCTACTCCACCT...TTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTGGTGGCAGAAGAGCTTaGTGGCTGGGCTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLGGRRA*WLGSVG
Trigger: ACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACC...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGCACAGGGCCTGGAGATaGCAGCGAAGGCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVHRAWR*QRRPRC
Trigger: ACATCTGGGCCTTCGCTGGCATCTCCAGGCCCTGTG...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTGGAGGGATGTTAAAGTaGTTGGTGGAGACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLGGMLK*LVETGP
Trigger: GGGACCAGTCTCCACCAAGCACTTTAACATCCCTCC...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACCGGACAGTGACGCGATaGAAGACTGCTCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDRTVTR*KTAPRA
Trigger: TGCCCTTGGAGCAGTCTTCCATCGCGTCACTGTCCG...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCCCCTCCCTGTCAAATaGCTAAAGGAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTPLPVK*LKEMSW
Trigger: CCAGCTCATCTCCTTTAGCCATTTGACAGGGAGGGG...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACACACAGCAAGGAAAGTaGGGCTACCGAGGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDTQQGK*GYRGGA
Trigger: TGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGT...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTATGCGCCTCAGGGCATaGGCCATCAGCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLMRLRA*AISSTS
Trigger: TGAGGTGCTGCTGATGGCTCATGCCCTGAGGCGCAT...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGGCCCACCAGCCCCTCTaGTGGCAGCCGCCGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQAHQPL*WQPPKG
Trigger: TCCTTTCGGCGGCTGCCAGCAGAGGGGCTGGTGGGC...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAACACTGGCAGGACCACTaGCTCACACTAGAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQHWQDH*LTLESF
Trigger: AAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAGTG...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTGGGCCTCTGGGAGGCTaGCTTCTCACTCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLGPLGG*LLTPQV
Trigger: AACTTGGGGAGTGAGAAGCCAGCCTCCCAGAGGCCC...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
3UTR CAA 72 bp TTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTaGGCCCAAGTCTGGACCAATGACCAGGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FTSKTHPSQRRA*AQVWTNDQVFL
Trigger: TAAGAAGACCTGGTCATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATATGAGAAACAGCCCTaGTCTGTCAGCCTAGATGGG +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQYEKQP*SVSLDG
Trigger: CCCATCTAGGCTGACAGAGCAGGGCTGTTTCTCATA...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTTCTCTGATTAAGACATaGAGTCTGCAAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSSLIKT*SLQTGA
Trigger: GGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGA...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTACTCTCAGATACATATaGGAAACAGCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLTLRYI*ETALLC
Trigger: ACAGAGCAGGGCTGTTTCTCATATGTATCTGAGAGT...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGCCATGGAGTCATCTCTaGTCTCATAGACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVPWSHL*SHRQGG
Trigger: GCCACCCTGTCTATGAGAGCAGAGATGACTCCATGG...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGGGAGGGATGTTAAAGTaGTTGGTGGAGACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVGGMLK*LVETGP
Trigger: GGGACCAGTCTCCACCAAGCACTTTAACATCCCTCC...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGGCTGGCTGGGCTCCGTaGGTTTCGAGCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQAGWAP*VSSHEG
Trigger: GCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGC...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTCCAAAACCCTCTTTCTaGAGACTCCCAGTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLPKPSF*RLPVSA
Trigger: GGCGCTGACTGGGAGTCTCCAGAAAGAGGGTTTTGG...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATTAAGTGCCCATCTCTaGGCTGTAATCCTAGACCCA +
Preference number: 4 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQLSAHL*AVILDP
Trigger: TGGGTCTAGGATTACAGCCCAGAGATGGGCACTTAA...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGTTCTGTCCCACTCCCAGACGTGCTTGGTGGAGACTaGTCCCTTCAGTGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SQKSVTFKALNSSVPLPDVLGGD*SLQCAK
Trigger: TTTAGCACACTGAAGGGACCAGTCTCCACCAAGCAC...GTCTGGGAGTGGGACAGAACTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTGTGGGGCTACCGAGGTaGCGCAGATTGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLVGLPR*RRLEQR
Trigger: TCTTTGTTCCAATCTGCGCCACCTCGGTAGCCCCAC...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGCCCGGCCCTTGTGAGTaGAGGGTCGTTGCGCATCCT +
Preference number: 4 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQPGPCE*RVVAHP
Trigger: AGGATGCGCAACGACCCTCCACTCACAAGGGCCGGG...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
3UTR CAA 72 bp GATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTaGGTGGAGACTGGTCCCTTCAGTGTGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: DQSMLAGGMLKC*VETGPFSVLNM
Trigger: CATGTTTAGCACACTGAAGGGACCAGTCTCCACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCTCCTTCTATCTTTTGTaGCAGGATAGCTCACTTAAC +
Preference number: 4 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLSFYLL*QDSSLN
Trigger: GTTAAGTGAGCTATCCTGTCACAAAAGATAGAAGGA...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTATTCTTGGCCCTGTCTaGTGGTGCGCATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLILGPV*WCASLS
Trigger: AGAAAGGGATGCGCACCAGCAGACAGGGCCAAGAAT...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTCACTGGCAGGACCACTaGCTCACACTAGAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLHWQDH*LTLESF
Trigger: AAACGACTCTAGTGTGAGGCAGTGGTCCTGCCAGTG...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGAGGGGCCAAAAACCTTaGCCTCTCTGTAACACGAGA +
Preference number: 4 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVRGQKP*PLCNTR
Trigger: TCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCT...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGGCCATGAAGGCAAACTaGCAGTCGGCAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQAMKAN*QSAGHQ
Trigger: CTGGTGCCCTGCCGACTGCCAGTTTGCCTTCATGGC...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTTTCTTTCTGCTCTGGTaGGACTGCCCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLFFLLW*DCPVPS
Trigger: GGAAGGAACTGGGCAGTCCCACCAGAGCAGAAAGAA...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTCAATCTATGCTGGCTaGAGGGATGTTAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTSIYAG*RDVKVL
Trigger: AAGCACTTTAACATCCCTCCAGCCAGCATAGATTGA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTTATGAGAAACAGCCCTaGTCTGTCAGCCTAGATGGG +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLYEKQP*SVSLDG
Trigger: CCCATCTAGGCTGACAGAGCAGGGCTGTTTCTCATA...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR GCA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATAGCTCACTTAACTTaGAAGGAAGTTACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGIAHLT*KEVTRS
Trigger: GGACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTAT...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTTGCCCACAAGCTCCATaGAGTCATCTCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLCPQAP*SHLCSH
Trigger: ATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCA...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CCA 90 bp CTGCCCAGTTCCTTCCAGGAGTCAGAAATCTGTGACTTTCAAGGCACTGAACAGACAAAGAGAAAACTGTaGTCTCTGATTAAGACATGG +
Preference number: 4 (lower is better)
Translates to: LPSSFQESEICDFQGTEQTKRKL*SLIKTW
Trigger: CCATGTCTTAATCAGAGACCACAGTTTTCTCTTTGT...CTGTTCAGTGCCTTGAAAGTCACAGATTTCTGACTCCTGGAAGGAACTGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR TCA 90 bp AGATTCATTATTTGTCAAGTTTGCTTACAAAGAGGGTTTGTCAGTCACTGGCAGCCAAGTCTGGACCAATaGCCAGGTCTTCTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: RFIICQVCLQRGFVSHWQPSLDQ*PGLLKC
Trigger: GCACTTAAGAAGACCTGGTCATTGGTCCAGACTTGG...CTGCCAGTGACTGACAAACCCTCTTTGTAAGCAAACTTGACAAATAATGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS GCA 90 bp GCTCGGCCGCACCACCCAATCAGCGGCCGCGAGGGGCCCTGGCACTaGCCACGCCCGGCGCTCCGCCTGGAAGGGCGGGAGGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: ARPHHPISGREGPWH*PRPALRLEGREGLA
Trigger: GGCGAGCCCCTCCCGCCCTTCCAGGCGGAGCGCCGGGCGTGGGCAGTGCCAGGGCCCCTCGCGGCCGCTGATTGGGTGGTGCGGCCGAGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 90 bp CGCTCCGCTCGGCCGCACCACCCAATCAGCGGCCGCGAGGGGCCCTaGCACTGCCCACGCCCGGCGCTCCGCCTGGAAGGGCGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RSARPHHPISGREGP*HCPRPALRLEGREG
Trigger: CCCCTCCCGCCCTTCCAGGCGGAGCGCCGGGCGTGGGCAGTGCCAGGGCCCCTCGCGGCCGCTGATTGGGTGGTGCGGCCGAGCGGAGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 90 bp GCGGCCGCGAGGGGCCCTGGCACTGCCCACGCCCGGCGCTCCGCCTaGAAGGGCGGGAGGGGCTCGCCCGGAGCTCAGAAGGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: AAARGPGTAHARRSA*KGGRGSPGAQKAPP
Trigger: AGGAGGTGCCTTCTGAGCTCCGGGCGAGCCCCTCCCGCCCTTCCAGGCGGAGCGCCGGGCGTGGGCAGTGCCAGGGCCCCTCGCGGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS GCA 90 bp CGGCCCAGGTGGTTCCGGAAGACCTGGTGGGGCACCACGCCGCACTaGGTGCGCACGGACAGACACCACTGGCCGCTAGCACCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RPRWFRKTWWGTTPH*VRTDRHHWPLAPSS
Trigger: TGAGCTGGGTGCTAGCGGCCAGTGGTGTCTGTCCGTGCGCACGCAGTGCGGCGTGGTGCCCCACCAGGTCTTCCGGAACCACCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 90 bp CCGAGCGGATCACCTTGCTGCGAATGGCCTTCTTGCGCACCAGCGTaGGCGAGCAGTAGGGATTCCCCAGGCGGGCATGGCGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: PSGSPCCEWPSCAPA*ASSRDSPGGHGGHG
Trigger: GCCGTGCCCGCCATGCCCGCCTGGGGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 90 bp CGCGGTAGGCCCCCGAGCGGATCACCTTGCTGCGAATGGCCTTCTTaGGCACCAGCGTGGGCGAGCAGTAGGGATTCCCCAGGCGGGCAT +
Preference number: 5 (lower is better)
Translates to: RGRPPSGSPCCEWPS*APAWASSRDSPGGH
Trigger: ATGCCCGCCTGGGGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 90 bp GCTCGGAGGAGGCGCTCAGGGTGGTTCGGGCCCGGCCCTTGTGAGTaGAGGGTCGTTGCGCATCCTCCTCCTCACTTTCTTCCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: ARRRRSGWFGPGPCE*RVVAHPPPHFLPAG
Trigger: CCCGGCAGGAAGAAAGTGAGGAGGAGGATGCGCAACGACCCTCCACTCACAAGGGCCGGGCCCGAACCACCCTGAGCGCCTCCTCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS GCA 90 bp GGGTCTCATAGGTGCAGCCGCGGTAGGCCCCCGAGCGGATCACCTTaGTGCGAATGGCCTTCTTGCGCACCAGCGTGGGCGAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: GSHRCSRGRPPSGSP*CEWPSCAPAWASSR
Trigger: CCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCACCTATGAGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 90 bp CAGGAAAGGCCTCCCGAGCCGACAGCTGCAGCTGGGTCTCATAGGTaGAGCCGCGGTAGGCCCCCGAGCGGATCACCTTGCTGCGAATGG +
Preference number: 5 (lower is better)
Translates to: QERPPEPTAAAGSHR*SRGRPPSGSPCCEW
Trigger: CCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCACCTATGAGACCCAGCTGCAGCTGTCGGCTCGGGAGGCCTTTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 90 bp AAGTGCCCTCCCAGGCCACCCACCTTCAGCGCCCACAGCTGCTGCTaGACCAGCCACACGCTCTCCTGGGTGTCCAGGTCATCCACAGGG +
Preference number: 5 (lower is better)
Translates to: KCPPRPPTFSAHSCC*TSHTLSWVSRSSTG
Trigger: CCCTGTGGATGACCTGGACACCCAGGAGAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCTGAAGGTGGGTGGCCTGGGAGGGCACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447746.6
CDS GCA 90 bp GGGAAGTGCCCTCCCAGGCCACCCACCTTCAGCGCCCACAGCTGCTaGTGCACCAGCCACACGCTCTCCTGGGTGTCCAGGTCATCCACA +
Preference number: 5 (lower is better)
Translates to: GKCPPRPPTFSAHSC*CTSHTLSWVSRSST
Trigger: TGTGGATGACCTGGACACCCAGGAGAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCTGAAGGTGGGTGGCCTGGGAGGGCACTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447746.6
CDS CCA 90 bp ACACTGGACCGGAGTGTCTCCGTTCCCAGTGTGAAGGATCGAGCCTaGCTCGGAGGAGGCGCTCAGGGTGGTTCGGGCCCGGCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: TLDRSVSVPSVKDRA*LGGGAQGGSGPALV
Trigger: CACAAGGGCCGGGCCCGAACCACCCTGAGCGCCTCCTCCGAGCCAGGCTCGATCCTTCACACTGGGAACGGAGACACTCCGGTCCAGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 90 bp AGGTGCAGCCGCGGTAGGCCCCCGAGCGGATCACCTTGCTGCGAATaGCCTTCTTGCGCACCAGCGTGGGCGAGCAGTAGGGATTCCCCA +
Preference number: 5 (lower is better)
Translates to: RCSRGRPPSGSPCCE*PSCAPAWASSRDSP
Trigger: TGGGGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 90 bp TCCCAGTGTGAAGGATCGAGCCTGGCTCGGAGGAGGCGCTCAGGGTaGTTCGGGCCCGGCCCTTGTGAGTGGAGGGTCGTTGCGCATCCT +
Preference number: 5 (lower is better)
Translates to: SQCEGSSLARRRRSG*FGPGPCEWRVVAHP
Trigger: AGGATGCGCAACGACCCTCCACTCACAAGGGCCGGGCCCGAACCACCCTGAGCGCCTCCTCCGAGCCAGGCTCGATCCTTCACACTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS GCA 90 bp TCTCATAGGTGCAGCCGCGGTAGGCCCCCGAGCGGATCACCTTGCTaGGAATGGCCTTCTTGCGCACCAGCGTGGGCGAGCAGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: SHRCSRGRPPSGSPC*EWPSCAPAWASSRD
Trigger: ATCCCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCACCTATGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 90 bp CGGCCCATGTCGAGGGGACAGAAGAGGCTACGTTCAGTAACCGCGTaGTTCTCCACCAGAGCCTCCAGGCTGGGGAACTCTGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: RPMSRGQKRLRSVTA*FSTRASRLGNSAGR
Trigger: CCTGCCGGCAGAGTTCCCCAGCCTGGAGGCTCTGGTGGAGAACCACGCGGTTACTGAACGTAGCCTCTTCTGTCCCCTCGACATGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS-3UTR CAA 90 bp CAAGCGCCCCCGGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGGCCCTTGTGACTCCGTaGCTCGCCTGTCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: QAPPAGPTSGPPFDGSAVALVTP*LACHPS
Trigger: AGAGGGATGACAGGCGAGCAACGGAGTCACAAGGGC...CACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCCGGGGGCGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGAGGTGGCAGAAGAGCTaGCTGGCTGGGCTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAERWQKS*LAGLRG
Trigger: CCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCT...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGCTCCTCACGGGAGGGTaGGAGGTGGGGAACACGAGG +
Preference number: 5 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRLLTGG*EVGNTR
Trigger: CCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGGAG...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGACGTACTGGGCAAACTaGGTGATGCACCTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVTYWAN*VMHLGR
Trigger: CCGGCCCAGGTGCATCACCAAGTTTGCCCAGTACGT...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS CCA 90 bp GCTGCCCACAAAGAGGTGGCAGAAGAGCTTGCTGGCTGGGCTCCGTaGGTTTCGAGCCATGAAGGCAAACTGGCAGTCGGCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: AAHKEVAEELAGWAP*VSSHEGKLAVGRAP
Trigger: TGGTGCCCTGCCGACTGCCAGTTTGCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTTGTGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
ENST00000517430.5
ENST00000518294.5
CDS CCA 90 bp TCCTGGCTGGCTGCCCACAAAGAGGTGGCAGAAGAGCTTGCTGGCTaGGCTCCGTGGGTTTCGAGCCATGAAGGCAAACTGGCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: SWLAAHKEVAEELAG*APWVSSHEGKLAVG
Trigger: GCCGACTGCCAGTTTGCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTTGTGGGCAGCCAGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
ENST00000518294.5
CDS CCA 90 bp AGGTGCAGGATCTGGACCTCTCCTGGCTGGCTGCCCACAAAGAGGTaGCAGAAGAGCTTGCTGGCTGGGCTCCGTGGGTTTCGAGCCATG +
Preference number: 5 (lower is better)
Translates to: RCRIWTSPGWLPTKR*QKSLLAGLRGFRAM
Trigger: CATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTTGTGGGCAGCCAGCCAGGAGAGGTCCAGATCCTGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
CDS-3UTR CAA 90 bp GGACCACTGCCTCACACTAGAGTCGTTTCCCTGGGTCTCCCATGGCCCGCTGAGCCCGAGCGGATCACCTaGCTGCGAATGGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GPLPHTRVVSLGLPWPAEPERIT*LRMAFL
Trigger: CAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGG...CTCAGCGGGCCATGGGAGACCCAGGGAAACGACTCTAGTGTGAGGCAGTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp ATCGGACAGCCTCCCTCCCAAGGCAGCCACCAAACCACATGCGGTCGAGTTAGGCCCGAGCGGATCACCTaGCTGCGAATGGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: IGQPPSQGSHQTTCGRVRPERIT*LRMAFL
Trigger: CAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGG...CCTAACTCGACCGCATGTGGTTTGGTGGCTGCCTTGGGAGGGAGGCTGTCCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CACAGGAGTCCACCGTGCGTGAGCGTTAGGTACAGCCCTCTGTCCCTCCTGCCCTTCTCCAAGAAGCCATaGGCGATACCCACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: HRSPPCVSVRYSPLSLLPFSKKP*AIPTLR
Trigger: CCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAA...GGGCAGGAGGGACAGAGGGCTGTACCTAACGCTCACGCACGGTGGACTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CAAGCGCCCCCGGCAGGGCCCACATCAGGTCCACCTTTCGACGGTTCTGCTGTGGCTCACTCCAGGTCTTaGCCCAGAGTAAAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: QAPPAGPTSGPPFDGSAVAHSRS*PRVKAH
Trigger: GTGAGCTTTTACTCTGGGCAAAGACCTGGAGTGAGC...CACAGCAGAACCGTCGAAAGGTGGACCTGATGTGGGCCCTGCCGGGGGCGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCCTCCTCACGGGAGGGTaGGAGGTGGGGAACACGAGG +
Preference number: 5 (lower is better)
Translates to: LESQQATCSPRSHWRYPPLLTGG*EVGNTR
Trigger: CCTCGTGTTCCCCACCTCCAACCCTCCCGTGAGGAG...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGCCCTTGTGACTCCGTaGCTCGCCTGTCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: PKGYPKPATPPALLESQQALVTP*LACHPS
Trigger: AGAGGGATGACAGGCGAGCAACGGAGTCACAAGGGC...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAAAGGTGGCAGAAGAGCTaGCTGGCTGGGCTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKRWQKS*LAGLRG
Trigger: CCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCT...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGTGAGTGGAGGGTCGTaGCGCATCCTCCTCCTCACT +
Preference number: 5 (lower is better)
Translates to: PKGLSEACNSTCPPGISAVSGGS*RILLLT
Trigger: AGTGAGGAGGAGGATGCGCAACGACCCTCCACTCAC...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS-3UTR CAA 90 bp GGTAATTCACCAGTAAAACCCATCCCTCACAGAGGAGAGCCTTGGCCCAAGTCTCTGCGAATGGCCTTCTaGCGCACCAGCGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GNSPVKPIPHRGEPWPKSLRMAF*RTSVGE
Trigger: CTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAG...AGACTTGGGCCAAGGCTCTCCTCTGTGAGGGATGGGTTTTACTGGTGAATTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp TGGAGTCTGCAAACAGGGGCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAAAGCTCTGCCTCGGACTaGGCATGGCTGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: WSLQTGAKNLALSVTRDQSSASD*AWLRGR
Trigger: CCGGCCCCTCAGCCATGCCAAGTCCGAGGCAGAGCT...TTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGCCCCTGTTTGCAGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp TCCCCAGCCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGACAGCATGGAGATTCTaGGCCCTGTCTGCTGGTGCG +
Preference number: 5 (lower is better)
Translates to: SPASCPQAPWSHLCSHRQTAWRF*ALSAGA
Trigger: CGCACCAGCAGACAGGGCCAAGAATCTCCATGCTGT...CTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGACAGCATGGAGATTCTaGGCCCTGTCTGCTGGTGCG +
Preference number: 5 (lower is better)
Translates to: PKGYPKPATPPALLESQQTAWRF*ALSAGA
Trigger: CGCACCAGCAGACAGGGCCAAGAATCTCCATGCTGT...CTGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 90 bp AGCAGGGAAGCAAATCCATGTCTCTGGAGCTGTTTCCTCAGGCCATaGCGGTGCCTTTCTGCTCGGACTCCCCTCCCACAGATAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SREANPCLWSCFLRP*RCLSARTPLPQISR
Trigger: CCTACTTATCTGTGGGAGGGGAGTCCGAGCAGAAAGGCACCGCCATGGCCTGAGGAAACAGCTCCAGAGACATGGATTTGCTTCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519434.1
CDS CCA 90 bp GTCACACAGCTTCAGTGGGAGAGCAGGGAAGCAAATCCATGTCTCTaGAGCTGTTTCCTCAGGCCATGGCGGTGCCTTTCTGCTCGGACT +
Preference number: 5 (lower is better)
Translates to: VTQLQWESREANPCL*SCFLRPWRCLSART
Trigger: AGTCCGAGCAGAAAGGCACCGCCATGGCCTGAGGAAACAGCTCCAGAGACATGGATTTGCTTCCCTGCTCTCCCACTGAAGCTGTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519434.1
CDS-3UTR CAA 90 bp CAGTCAGCGCCCCAAGGCCTAGCCTCCTTAGGAGAGGGCTGCAGCTTTGCCGTGGATAGCTCACTTAACTaGCAAGGAAGTTACAAGGTC +
Preference number: 5 (lower is better)
Translates to: QSAPQGLASLGEGCSFAVDSSLN*QGSYKV
Trigger: GACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTATC...CACGGCAAAGCTGCAGCCCTCTCCTAAGGAGGCTAGGCCTTGGGGCGCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CTGGAATCTCAGCAGGCCACATGTTCTCCAAGAAGCCATTGGCGATACCCACCCTCACAGAGGAGAGCCTaGGCCCAAGTCTGGACCAAT +
Preference number: 5 (lower is better)
Translates to: LESQQATCSPRSHWRYPPSQRRA*AQVWTN
Trigger: ATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGA...GGGTGGGTATCGCCAATGGCTTCTTGGAGAACATGTGGCCTGCTGAGATTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CCCAAAGGGTTATCCGAAGCCTGCAACTCCACCTGCCCTCCTGGAATCTCAGCAGGGATGTTAAAGTGCTaGGTGGAGACTGGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PKGLSEACNSTCPPGISAGMLKC*VETGPF
Trigger: GAAGGGACCAGTCTCCACCAAGCACTTTAACATCCC...TGCTGAGATTCCAGGAGGGCAGGTGGAGTTGCAGGCTTCGGATAACCCTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp AAACTGTGGTCTCTGATTAAGACATGGAGTCTGCAAACAGGGGCCAAAAACCTTAGCTCTGCCTCGGACTaGGCATGGCTGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: KLWSLIKTWSLQTGAKNLSSASD*AWLRGR
Trigger: CCGGCCCCTCAGCCATGCCAAGTCCGAGGCAGAGCT...AAGGTTTTTGGCCCCTGTTTGCAGACTCCATGTCTTAATCAGAGACCACAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAACACAGCCCTGAGGTTTaGAGTGGAGACAGCATGGAG +
Preference number: 5 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKHSPEV*SGDSME
Trigger: CTCCATGCTGTCTCCACTCAAAACCTCAGGGCTGTG...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CCTCCTGCCCACAAGCTCCATGGAGTCATCTCTGCTCTCATAGACAGGGTGGCTATAGAGACCAGTGGTTaGTCCAGGCTCCAGTACAGA +
Preference number: 5 (lower is better)
Translates to: PPAHKLHGVISALIDRVAIETSG*SRLQYR
Trigger: TCTGTACTGGAGCCTGGACAAACCACTGGTCTCTAT...AGCCACCCTGTCTATGAGAGCAGAGATGACTCCATGGAGCTTGTGGGCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTTCTCCAAGAAGCCATaGGCGATACCCACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTFSKKP*AIPTLR
Trigger: CCTGAGGGTGGGTATCGCCAATGGCTTCTTGGAGAA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCGCTCACTCCAGGTCTTaGCCCAGAGTAAAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLAHSRS*PRVKAH
Trigger: GTGAGCTTTTACTCTGGGCAAAGACCTGGAGTGAGC...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCACAGCCCTGAGGTTTaGAGTGGAGACAGCATGGAG +
Preference number: 5 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTHSPEV*SGDSME
Trigger: CTCCATGCTGTCTCCACTCAAAACCTCAGGGCTGTG...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTTCACAGAGGAGAGCCTaGGCCCAAGTCTGGACCAAT +
Preference number: 5 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTSQRRA*AQVWTN
Trigger: ATTGGTCCAGACTTGGGCCAAGGCTCTCCTCTGTGA...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp GCCAAAAACCTTGCCCTCTCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGGCTTACAAAGAGGGTTaGTCAGTCACTGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: AKNLALSVTRDQSMLAGGAYKEG*SVTGRT
Trigger: GGTCCTGCCAGTGACTGACAAACCCTCTTTGTAAGC...CCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGAGAGGGCAAGGTTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp TGCCCATCTCTGGGCTGTAATCCTAGACCCAGGACATGGCTAAACCTCTCTCTCATAGAGACCAGTGGTTaGTCCAGGCTCCAGTACAGA +
Preference number: 5 (lower is better)
Translates to: CPSLGCNPRPRTWLNLSLIETSG*SRLQYR
Trigger: TCTGTACTGGAGCCTGGACAAACCACTGGTCTCTAT...GAGAGAGAGGTTTAGCCATGTCCTGGGTCTAGGATTACAGCCCAGAGATGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp CCAGTGGTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTGGGATGTTAAAGTGCTaGGTGGAGACTGGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PVVCPGSSTDGCKTESQLGMLKC*VETGPF
Trigger: GAAGGGACCAGTCTCCACCAAGCACTTTAACATCCC...AAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp GTTTGTCCAGGCTCCAGTACAGATGGCTGTAAAACAGAGTCCCAGCTTCCCACTCCGAGGTGGCGCAGATaGGAACAAAGAGAAAACTGT +
Preference number: 5 (lower is better)
Translates to: VCPGSSTDGCKTESQLPTPRWRR*EQRENC
Trigger: ACAGTTTTCTCTTTGTTCCAATCTGCGCCACCTCGG...AGTGGGAAGCTGGGACTCTGTTTTACAGCCATCTGTACTGGAGCCTGGACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGGCTTACAAAGAGGGTTaGTCAGTCACTGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVAYKEG*SVTGRT
Trigger: GGTCCTGCCAGTGACTGACAAACCCTCTTTGTAAGC...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp AAGTCCACACAGCAAGGAAAGTGGGGCTACCGAGGTGGCGCAGATTGGAACAAAGATAGCTCACTTAACTaGCAAGGAAGTTACAAGGTC +
Preference number: 5 (lower is better)
Translates to: KSTQQGKWGYRGGADWNKDSSLN*QGSYKV
Trigger: GACCTTGTAACTTCCTTGCAAGTTAAGTGAGCTATC...TTTGTTCCAATCTGCGCCACCTCGGTAGCCCCACTTTCCTTGCTGTGTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS-3UTR CAA 90 bp TCTGTAACACGAGATCAATCTATGCTGGCTGGAGGGATGTTAAAGTGCTTGGTGCCGAGGTGGCGCAGATaGGAACAAAGAGAAAACTGT +
Preference number: 5 (lower is better)
Translates to: SVTRDQSMLAGGMLKCLVPRWRR*EQRENC
Trigger: ACAGTTTTCTCTTTGTTCCAATCTGCGCCACCTCGG...CACCAAGCACTTTAACATCCCTCCAGCCAGCATAGATTGATCTCGTGTTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 72 bp CGGCCGCACCACCCAATCAGCGGCCGCGAGGGGCCCTaGCACTGCCCACGCCCGGCGCTCCGCCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: RPHHPISGREGP*HCPRPALRLEG
Trigger: CCCTTCCAGGCGGAGCGCCGGGCGTGGGCAGTGCCAGGGCCCCTCGCGGCCGCTGATTGGGTGGTGCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS GCA 72 bp CACCACCCAATCAGCGGCCGCGAGGGGCCCTGGCACTaGCCACGCCCGGCGCTCCGCCTGGAAGGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: HHPISGREGPWH*PRPALRLEGRE
Trigger: CTCCCGCCCTTCCAGGCGGAGCGCCGGGCGTGGGCAGTGCCAGGGCCCCTCGCGGCCGCTGATTGGGTGGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 72 bp AGGGGCCCTGGCACTGCCCACGCCCGGCGCTCCGCCTaGAAGGGCGGGAGGGGCTCGCCCGGAGCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: RGPGTAHARRSA*KGGRGSPGAQK
Trigger: CTTCTGAGCTCCGGGCGAGCCCCTCCCGCCCTTCCAGGCGGAGCGCCGGGCGTGGGCAGTGCCAGGGCCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS TCA 72 bp ACGTACTGGGCAAACTTGGTGATGCACCTGGGCCGGTaGGGGGCCAGCCCGCAGTCAGAGGCCCTGCGGCCC +
Preference number: 6 (lower is better)
Translates to: TYWANLVMHLGR*GASPQSEALRP
Trigger: GGGCCGCAGGGCCTCTGACTGCGGGCTGGCCCCTCACCGGCCCAGGTGCATCACCAAGTTTGCCCAGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000444387.7
ENST00000447746.6
ENST00000517430.5
ENST00000518294.5
ENST00000519434.1
CDS GCA 72 bp CGGCGTCGGGGACAGTCCTTCAGCGCCCACAGCTGCTaGTGCACCAGCCACACGCTCTCCTGGGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RRRGQSFSAHSC*CTSHTLSWVSR
Trigger: CCTGGACACCCAGGAGAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCTGAAGGACTGTCCCCGACGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000517430.5
ENST00000518294.5
ENST00000519434.1
CDS GCA 72 bp TGCAGCCGCGGTAGGCCCCCGAGCGGATCACCTTGCTaGGAATGGCCTTCTTGCGCACCAGCGTGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: CSRGRPPSGSPC*EWPSCAPAWAS
Trigger: GCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 72 bp AGGTGCAGCCGCGGTAGGCCCCCGAGCGGATCACCTTaGTGCGAATGGCCTTCTTGCGCACCAGCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: RCSRGRPPSGSP*CEWPSCAPAWA
Trigger: CGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 72 bp CCTCCCGAGCCGACAGCTGCAGCTGGGTCTCATAGGTaGAGCCGCGGTAGGCCCCCGAGCGGATCACCTTGC +
Preference number: 6 (lower is better)
Translates to: PPEPTAAAGSHR*SRGRPPSGSPC
Trigger: GCAAGGTGATCCGCTCGGGGGCCTACCGCGGCTGCACCTATGAGACCCAGCTGCAGCTGTCGGCTCGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 72 bp CCGGGGCCCTACCTCTTAGCCCAGGCCCTGCAGCTCTaGCTCGGACTTGGCATGGCTGAGGGGCCGGAGAGT +
Preference number: 6 (lower is better)
Translates to: PGPYLLAQALQL*LGLGMAEGPES
Trigger: ACTCTCCGGCCCCTCAGCCATGCCAAGTCCGAGGCAGAGCTGCAGGGCCTGGGCTAAGAGGTAGGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS GCA 72 bp CCTCCCAGGCCACCCACCTTCAGCGCCCACAGCTGCTaGTGCACCAGCCACACGCTCTCCTGGGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PPRPPTFSAHSC*CTSHTLSWVSR
Trigger: CCTGGACACCCAGGAGAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCTGAAGGTGGGTGGCCTGGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447746.6
CDS CCA 72 bp CCCCAGGCGGGCATGGCGGGCACGGCCTTCCGACTCTaGCAGCTCCTTCCAGTTCCCTTGTCCACTGCCCAC +
Preference number: 6 (lower is better)
Translates to: PQAGMAGTAFRL*QLLPVPLSTAH
Trigger: GTGGGCAGTGGACAAGGGAACTGGAAGGAGCTGCCAGAGTCGGAAGGCCGTGCCCGCCATGCCCGCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460804.5
CDS GCA 72 bp TGGTTCCGGAAGACCTGGTGGGGCACCACGCCGCACTaGGTGCGCACGGACAGACACCACTGGCCGCTAGCA +
Preference number: 6 (lower is better)
Translates to: WFRKTWWGTTPH*VRTDRHHWPLA
Trigger: TGCTAGCGGCCAGTGGTGTCTGTCCGTGCGCACGCAGTGCGGCGTGGTGCCCCACCAGGTCTTCCGGAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 72 bp CGGAGTGTCTCCGTTCCCAGTGTGAAGGATCGAGCCTaGCTCGGAGGAGGCGCTCAGGGTGGTTCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: RSVSVPSVKDRA*LGGGAQGGSGP
Trigger: CGGGCCCGAACCACCCTGAGCGCCTCCTCCGAGCCAGGCTCGATCCTTCACACTGGGAACGGAGACACTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 72 bp CGCGGTAGGCCCCCGAGCGGATCACCTTGCTGCGAATaGCCTTCTTGCGCACCAGCGTGGGCGAGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: RGRPPSGSPCCE*PSCAPAWASSR
Trigger: CCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGGCCTACCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 72 bp GCCTGCCTGGGGGCCCACAGTCCTGCTCCTCGTAGGTaGGGTTCAGGCGGCCCATGTCGAGGGGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: ACLGAHSPAPRR*GSGGPCRGDRR
Trigger: TCTTCTGTCCCCTCGACATGGGCCGCCTGAACCCCACCTACGAGGAGCAGGACTGTGGGCCCCCAGGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 72 bp GAAGGATCGAGCCTGGCTCGGAGGAGGCGCTCAGGGTaGTTCGGGCCCGGCCCTTGTGAGTGGAGGGTCGTT +
Preference number: 6 (lower is better)
Translates to: EGSSLARRRRSG*FGPGPCEWRVV
Trigger: AACGACCCTCCACTCACAAGGGCCGGGCCCGAACCACCCTGAGCGCCTCCTCCGAGCCAGGCTCGATCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS GCA 72 bp CGTCGGGGACAGTCCTTCAGCGCCCACAGCTGCTGCTaGACCAGCCACACGCTCTCCTGGGTGTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: RRGQSFSAHSCC*TSHTLSWVSRS
Trigger: TGACCTGGACACCCAGGAGAGCGTGTGGCTGGTGCAGCAGCAGCTGTGGGCGCTGAAGGACTGTCCCCGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000517430.5
ENST00000518294.5
ENST00000519434.1
CDS CAA 90 bp GGCGCTCAGGGTGGTTCGGGCCCGGCCCTTGTGAGTGGAGGGTCGTaGCGCATCCTCCTCCTCACTTTCTTCCTGCCGGGACGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: GAQGGSGPALVSGGS*RILLLTFFLPGRSQ
Trigger: CTGAGAACGTCCCGGCAGGAAGAAAGTGAGGAGGAGGATGCGCAACGACCCTCCACTCACAAGGGCCGGGCCCGAACCACCCTGAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS GCA 72 bp CCCCCGAGCGGATCACCTTGCTGCGAATGGCCTTCTTaGGCACCAGCGTGGGCGAGCAGTAGGGATTCCCCA +
Preference number: 6 (lower is better)
Translates to: PPSGSPCCEWPS*APAWASSRDSP
Trigger: TGGGGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGATCCGCTCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 72 bp TCACCTTGCTGCGAATGGCCTTCTTGCGCACCAGCGTaGGCGAGCAGTAGGGATTCCCCAGGCGGGCATGGC +
Preference number: 6 (lower is better)
Translates to: SPCCEWPSCAPA*ASSRDSPGGHG
Trigger: GCCATGCCCGCCTGGGGAATCCCTACTGCTCGCCCACGCTGGTGCGCAAGAAGGCCATTCGCAGCAAGGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 72 bp AGCAGCAGGTGCAGGATCTGGACCGCACATGGGCCGTaGCCCCATCCTTCGGGCCCTTTAGGTGGGGAATCG +
Preference number: 6 (lower is better)
Translates to: SSRCRIWTAHGP*PHPSGPLGGES
Trigger: CGATTCCCCACCTAAAGGGCCCGAAGGATGGGGCCACGGCCCATGTGCGGTCCAGATCCTGCACCTGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460804.5
CDS CAA 72 bp GGTGGTTCGGGCCCGGCCCTTGTGAGTGGAGGGTCGTaGCGCATCCTCCTCCTCACTTTCTTCCTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: GGSGPALVSGGS*RILLLTFFLPG
Trigger: TCCCGGCAGGAAGAAAGTGAGGAGGAGGATGCGCAACGACCCTCCACTCACAAGGGCCGGGCCCGAACCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS CAA 72 bp CAGCTCCTTCCAGTTCCCTTGTCCACTGCCCACTCCTaGGCTGGGGTGCTGCGTACCCCACTGCCCACCAGC +
Preference number: 6 (lower is better)
Translates to: QLLPVPLSTAHS*AGVLRTPLPTS
Trigger: GCTGGTGGGCAGTGGGGTACGCAGCACCCCAGCCAAGGAGTGGGCAGTGGACAAGGGAACTGGAAGGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460804.5
CDS CCA 72 bp AGGCGCTCAGGGTGGTTCGGGCCCGGCCCTTGTGAGTaGAGGGTCGTTGCGCATCCTCCTCCTCACTTTCTT +
Preference number: 6 (lower is better)
Translates to: RRSGWFGPGPCE*RVVAHPPPHFL
Trigger: AAGAAAGTGAGGAGGAGGATGCGCAACGACCCTCCACTCACAAGGGCCGGGCCCGAACCACCCTGAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444387.7
CDS CAA 72 bp CCTGGCTGGCTGCCCACAAAGAGGTGGCAGAAGAGCTaGCTGGCTGGGCTCCGTGGGTTTCGAGCCATGAAG +
Preference number: 6 (lower is better)
Translates to: PGWLPTKRWQKS*LAGLRGFRAMK
Trigger: CTTCATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTTGTGGGCAGCCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
ENST00000518294.5
CDS CAA 90 bp TGGACCTCTCCTGGCTGGCTGCCCACAAAGAGGTGGCAGAAGAGCTaGCTGGCTGGGCTCCGTGGGTTTCGAGCCATGAAGGCAAACTGG +
Preference number: 6 (lower is better)
Translates to: WTSPGWLPTKRWQKS*LAGLRGFRAMKANW
Trigger: CCAGTTTGCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTTGTGGGCAGCCAGCCAGGAGAGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
ENST00000518294.5
CDS CCA 72 bp GGAGGCTCCTGGGGTGCTCGTAGCTCTGGTCCTTCTTaGAATGTTTCCGAGGCTGACTGTGTGTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: GGSWGARSSGPS*NVSEADCVSGP
Trigger: GGGGCCTGACACACAGTCAGCCTCGGAAACATTCCAAGAAGGACCAGAGCTACGAGCACCCCAGGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517430.5
CDS TCA 72 bp CTGGGCCAGCACCTTCCGAAGGGGACACACTTGGAATaGGGCTGGAGCTGTCCTCTGAGGTTTTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LGQHLPKGTHLE*GWSCPLRFSRW
Trigger: CCACCTGGAAAACCTCAGAGGACAGCTCCAGCCTCATTCCAAGTGTGTCCCCTTCGGAAGGTGCTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519434.1
CDS CCA 72 bp AAAGAGGTGGCAGAAGAGCTTGCTGGCTGGGCTCCGTaGGTTTCGAGCCATGAAGGCAAACTGGCAGTCGGC +
Preference number: 6 (lower is better)
Translates to: KEVAEELAGWAP*VSSHEGKLAVG
Trigger: GCCGACTGCCAGTTTGCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
ENST00000517430.5
ENST00000518294.5
CDS CCA 72 bp GCTGCCCACAAAGAGGTGGCAGAAGAGCTTGCTGGCTaGGCTCCGTGGGTTTCGAGCCATGAAGGCAAACTG +
Preference number: 6 (lower is better)
Translates to: AAHKEVAEELAG*APWVSSHEGKL
Trigger: CAGTTTGCCTTCATGGCTCGAAACCCACGGAGCCCAGCCAGCAAGCTCTTCTGCCACCTCTTTGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000447746.6
ENST00000517430.5
ENST00000518294.5
CDS CCA 72 bp TCGAGGGGACAGAAGAGGCTACGTTCAGTAACCGCGTaGTTCTCCACCAGAGCCTCCAGGCTGGGGAACTCT +
Preference number: 6 (lower is better)
Translates to: SRGQKRLRSVTA*FSTRASRLGNS
Trigger: AGAGTTCCCCAGCCTGGAGGCTCTGGTGGAGAACCACGCGGTTACTGAACGTAGCCTCTTCTGTCCCCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375031.5
ENST00000444387.7
ENST00000460804.5
CDS CCA 72 bp GCAAATCCATGTCTCTGGAGCTGTTTCCTCAGGCCATaGCGGTGCCTTTCTGCTCGGACTCCCCTCCCACAG +
Preference number: 6 (lower is better)
Translates to: ANPCLWSCFLRP*RCLSARTPLPQ
Trigger: CTGTGGGAGGGGAGTCCGAGCAGAAAGGCACCGCCATGGCCTGAGGAAACAGCTCCAGAGACATGGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519434.1
CDS GCA 72 bp CCATGTCTCTGGAGCTGTTTCCTCAGGCCATGGCGGTaGCTTTCTGCTCGGACTCCCCTCCCACAGATAAGT +
Preference number: 6 (lower is better)
Translates to: PCLWSCFLRPWR*LSARTPLPQIS
Trigger: ACTTATCTGTGGGAGGGGAGTCCGAGCAGAAAGGCACCGCCATGGCCTGAGGAAACAGCTCCAGAGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519434.1
CDS GCA 72 bp GAAGCCTTCCACGACCACCACTCACGCTTCATTCTCTaGAGAGCCCTTGTGACTCCGTTGCTCGCCTGTCAT +
Preference number: 6 (lower is better)
Translates to: EAFHDHHSRFIL*RALVTPLLACH
Trigger: ATGACAGGCGAGCAACGGAGTCACAAGGGCTCTGCAGAGAATGAAGCGTGAGTGGTGGTCGTGGAAGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CAA 90 bp GACCACCACTCACGCTTCATTCTCTGCAGAGCCCTTGTGACTCCGTaGCTCGCCTGTCATCCCTCTCCTCTTACTCGAGGACAAGTGACA +
Preference number: 6 (lower is better)
Translates to: DHHSRFILCRALVTP*LACHPSPLTRGQVT
Trigger: TGTCACTTGTCCTCGAGTAAGAGGAGAGGGATGACAGGCGAGCAACGGAGTCACAAGGGCTCTGCAGAGAATGAAGCGTGAGTGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7
CDS CCA 72 bp CTTCAGTGGGAGAGCAGGGAAGCAAATCCATGTCTCTaGAGCTGTTTCCTCAGGCCATGGCGGTGCCTTTCT +
Preference number: 6 (lower is better)
Translates to: LQWESREANPCL*SCFLRPWRCLS
Trigger: AGAAAGGCACCGCCATGGCCTGAGGAAACAGCTCCAGAGACATGGATTTGCTTCCCTGCTCTCCCACTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519434.1
CDS CAA 72 bp TCACGCTTCATTCTCTGCAGAGCCCTTGTGACTCCGTaGCTCGCCTGTCATCCCTCTCCTCTTACTCGAGGA +
Preference number: 6 (lower is better)
Translates to: SRFILCRALVTP*LACHPSPLTRG
Trigger: TCCTCGAGTAAGAGGAGAGGGATGACAGGCGAGCAACGGAGTCACAAGGGCTCTGCAGAGAATGAAGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375031.5
ENST00000444387.7