RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH2D4B (Homo sapiens)

Ensembl gene IDs: ENSG00000178217

Ensembl transcript IDs: ENST00000313455.5, ENST00000339284.6, ENST00000372150.7, ENST00000646907.2

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATaGCTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCC +
Preference number: 1 (lower is better)
Translates to: VPPGGRRRKKRSTSL*LPFIPDSPHRAFTS
Trigger: GGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR GCA 90 bp TCTCAGTCTGCTTTCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTaGCTCCAACACCTTGAAAATCATCACATCATATCCCCTGATACA +
Preference number: 1 (lower is better)
Translates to: SQSAFKAAGSSWNRS*LQHLENHHIISPDT
Trigger: TGTATCAGGGGATATGATGTGATGATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGAAAGCAGACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR TCA 90 bp GCTGGGATGAGACCAGTAGCCCTATGCCATAGATGTCATATCCCTTaGGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTT +
Preference number: 1 (lower is better)
Translates to: AGMRPVALCHRCHIP*GILIYFFLWIVVDL
Trigger: AAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATATGACATCTATGGCATAGGGCTACTGGTCTCATCCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR TCA 90 bp GGCCATAACTGTGGAACACAAGTATGCACCAACAGATACCATCACTaGGAGTTATCGAGGAGTTATTGCGTGAGTCTTCTTGTTAATATA +
Preference number: 1 (lower is better)
Translates to: GHNCGTQVCTNRYHH*ELSRSYCVSLLVNI
Trigger: TATATTAACAAGAAGACTCACGCAATAACTCCTCGATAACTCTCAGTGATGGTATCTGTTGGTGCATACTTGTGTTCCACAGTTATGGCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR TCA 90 bp TTTATGCATGTAGTGAGACAGGTAGACCGGGGGAAGCCATGGAGCTaGGTGAGTTGCAAAATTGATATTATTGAACACTTCTGTATAATG +
Preference number: 1 (lower is better)
Translates to: FMHVVRQVDRGKPWS*VSCKIDIIEHFCIM
Trigger: CATTATACAGAAGTGTTCAATAATATCAATTTTGCAACTCACTCAGCTCCATGGCTTCCCCCGGTCTACCTGTCTCACTACATGCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR TCA 90 bp AATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTAGGATATaGACCCAAGTCTTCTTGACTGTAAAGACTGTAATCTTCTCTTCA +
Preference number: 1 (lower is better)
Translates to: NAASIIMLVSSRVRI*TQVFLTVKTVIFSS
Trigger: TGAAGAGAAGATTACAGTCTTTACAGTCAAGAAGACTTGGGTTCATATCCTAACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCTGCAGCAATGGGAGATaGGGCATGTGGCAAGCTACC +
Preference number: 2 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGCSNGR*GMWQAT
Trigger: GGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCA...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCGGGAGATGGGGCATGTaGCAAGCTACCATTGGCTTA +
Preference number: 2 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGGRWGM*QATIGL
Trigger: TAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCC...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAACGGTGTCAATCAGCTaGCCTGGAAACTGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGTVSIS*PGNWGS
Trigger: TGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGT...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCATGCCTCTGCAGCAATaGGAGATGGGGCATGTGGCA +
Preference number: 2 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFMPLQQ*EMGHVA
Trigger: TGCCACATGCCCCATCTCCCATTGCTGCAGAGGCAT...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR CAA 90 bp TATGCCTCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATaGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: YASAAMGDGACGKLP*AYAHMTLINIGRKS
Trigger: GCTCTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGAGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTGTCAATCAGCTGCCCTaGAAACTGGGGCTCACCTTA +
Preference number: 2 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSVNQLP*KLGLTL
Trigger: TAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGAC...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCTCCAGGGTTAGGATATaGACCCAAGTCTTCTTGACT +
Preference number: 2 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGSRVRI*TQVFLT
Trigger: AGTCAAGAAGACTTGGGTTCATATCCTAACCCTGGA...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACAGACCAGTAGCCCTATaGCATAGATGTCATATCCCT +
Preference number: 2 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHRPVAL*HRCHIP
Trigger: AGGGATATGACATCTATGGCATAGGGCTACTGGTCT...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCGAAGGCCATAGGATTTaGGATGAGAAGTTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPEGHRI*DEKFLS
Trigger: GCTTAAGAACTTCTCATCTCAAATCCTATGGCCTTC...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATTCTGTCCCGATCGCTaGGATGAGACCAGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPFCPDR*DETSSP
Trigger: AGGGCTACTGGTCTCATCCCAGCGATCGGGACAGAA...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGTGGGGCATAGATGTTTaGTACAGCCATCGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMWGIDV*YSHRVK
Trigger: CTTTACCCGATGGCTGTATCAAACATCTATGCCCCA...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCTCTAAGAACCATTCTTaGATTGATAACTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPSKNHS*IDNSPQ
Trigger: CTGGGGTGAGTTATCAATGCAAGAATGGTTCTTAGA...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTGGAACACAAGTATaGACCAACAGATACCATCAC +
Preference number: 2 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDCGTQV*TNRYHH
Trigger: GTGATGGTATCTGTTGGTGCATACTTGTGTTCCACA...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGTCTGTCTTATGCCTCTaGAGCAATGGGAGATGGGGC +
Preference number: 2 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRSVLCL*SNGRWG
Trigger: GCCCCATCTCCCATTGCTGCAGAGGCATAAGACAGA...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACGACAGAGCTAATCATTaGAGTAACCTGCATAGAGAG +
Preference number: 2 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDDRANH*SNLHRE
Trigger: CTCTCTATGCAGGTTACTCCAATGATTAGCTCTGTC...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTACCAAGGCCAAAATATaGTTCAAAGATAGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSTKAKI*FKDRGE
Trigger: CTCGCCTCTATCTTTGAATCATATTTTGGCCTTGGT...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGATCTACTTTTTCCTTTaGATAGTGGTGGATCTTCCA +
Preference number: 2 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALIYFFL*IVVDLP
Trigger: TGGAAGATCCACCACTATCCAAAGGAAAAAGTAGAT...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAGACAGAGCTAATCATTaGAGTAACCTGCATAGAGAG +
Preference number: 2 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGDRANH*SNLHRE
Trigger: CTCTCTATGCAGGTTACTCCAATGATTAGCTCTGTC...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR CAA 90 bp TCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTGCCTCCAACACCTaGAAAATCATCACATCATATCCCCTGATACATCATGGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: SKLLGVLGTEVASNT*KIITSYPLIHHGLS
Trigger: GCTTAGCCCATGATGTATCAGGGGATATGATGTGATGATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR-3UTR TCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACCATGAAAGAGTTGCATaGGCTATTAGCAATTTCTGT +
Preference number: 2 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDHERVA*AISNFC
Trigger: ACAGAAATTGCTAATAGCTCATGCAACTCTTTCATG...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGATCATTGGAGTAACCTaGATAGAGAGGGCCACATCC +
Preference number: 2 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRIIGVT*IERATS
Trigger: GGATGTGGCCCTCTCTATGCAGGTTACTCCAATGAT...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGTTCTGTCCCGATCGCTaGGATGAGACCAGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLFCPDR*DETSSP
Trigger: AGGGCTACTGGTCTCATCCCAGCGATCGGGACAGAA...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGATGGATTATTAAAACATaGTCCACGCACTGTAAGAGC +
Preference number: 2 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGWIIKT*STHCKS
Trigger: GCTCTTACAGTGCGTGGACCATGTTTTAATAATCCA...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCTTCAGGGTTCGGCACTaGAATTATTTTGGATTATTA +
Preference number: 2 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSFRVRH*NYFGLL
Trigger: TAATAATCCAAAATAATTCCAGTGCCGAACCCTGAA...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTAAAGATAGAGGCGAGTaGCAAAAGAAGAGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSKDRGE*QKKRLN
Trigger: ATTTAACCTCTTCTTTTGCCACTCGCCTCTATCTTT...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACAAATCTAAGGAATAGGTaGGGCAAGAGAAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTNLRNR*GKRRSG
Trigger: CCCACTTCTTCTCTTGCCTCACCTATTCCTTAGATT...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGCGATCTACCAGCCTATaGCTCCCATTCATCCCAGAT +
Preference number: 2 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLRSTSL*LPFIPD
Trigger: ATCTGGGATGAATGGGAGTCATAGGCTGGTAGATCG...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR-3UTR TCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGAACAGATACCATCACTaGGAGTTATCGAGGAGTTAT +
Preference number: 2 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRNRYHH*ELSRSY
Trigger: ATAACTCCTCGATAACTCTCAGTGATGGTATCTGTT...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATAGACCAGTAGCCCTATaGCATAGATGTCATATCCCT +
Preference number: 2 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNRPVAL*HRCHIP
Trigger: AGGGATATGACATCTATGGCATAGGGCTACTGGTCT...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp ATACAGCCATCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATATCATTGGAGTAACCTaGATAGAGAGGGCCACATCC +
Preference number: 2 (lower is better)
Translates to: IQPSGKVNRSLTFLESIHIIGVT*IERATS
Trigger: GGATGTGGCCCTCTCTATGCAGGTTACTCCAATGAT...ATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGATGGCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp TCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTGCCTCCAACACCTTGAAAATCCACCAAACACAATGCTaGAAGCATTATAATGCTAGT +
Preference number: 2 (lower is better)
Translates to: SKLLGVLGTEVASNTLKIHQTQC*KHYNAS
Trigger: ACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTG...GATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR-3UTR TCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACAGAGAAGTTCTTAAGCTaGGTTCAAAAACAGGATACC +
Preference number: 2 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTEKFLS*VQKQDT
Trigger: GGTATCCTGTTTTTGAACTCAGCTTAAGAACTTCTC...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCAGGAGATTATGAAAGATaGAGCATTTATGTCCTCCAT +
Preference number: 2 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPGDYER*SIYVLH
Trigger: ATGGAGGACATAAATGCTGCATCTTTCATAATCTCC...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGATCTACTTTTTCCTTTaGATAGTGGTGGATCTTCCA +
Preference number: 2 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRIYFFL*IVVDLP
Trigger: TGGAAGATCCACCACTATCCAAAGGAAAAAGTAGAT...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR TCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATGAGAAGTTCTTAAGCTaGGTTCAAAAACAGGATACC +
Preference number: 2 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNEKFLS*VQKQDT
Trigger: GGTATCCTGTTTTTGAACTCAGCTTAAGAACTTCTC...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATTATCGAGGAGTTATTaGGTGAGTCTTCTTGTTAAT +
Preference number: 2 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPLSRSY*VSLLVN
Trigger: ATTAACAAGAAGACTCACGCAATAACTCCTCGATAA...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR GCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGGCTACCATTGGCTTATaGTCACATGACACTGATCAA +
Preference number: 2 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLATIGL*SHDTDQ
Trigger: TTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGC...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR-3UTR TCA 90 bp GTCTTCTTGACTGTAAAGACTGTAATCTTCTCTTCATCATATACTACCTCTGTGGAAGGCCATAGGATTTaGGATGAGAAGTTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: VFLTVKTVIFSSSYTTSVEGHRI*DEKFLS
Trigger: GCTTAAGAACTTCTCATCTCAAATCCTATGGCCTTC...CACAGAGGTAGTATATGATGAAGAGAAGATTACAGTCTTTACAGTCAAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACATTCAGGGTTCGGCACTaGAATTATTTTGGATTATTA +
Preference number: 2 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTFRVRH*NYFGLL
Trigger: TAATAATCCAAAATAATTCCAGTGCCGAACCCTGAA...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR CCA 72 bp GGGGCAGCAGGGTGTCATACTGATCCGGCCACCACTTaGTTTCATCATGACTGGTTGCTCGATCTTACAGGA +
Preference number: 3 (lower is better)
Translates to: GAAGCHTDPATT*FHHDWLLDLTG
Trigger: TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGTATGACACCCTGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR TCA 72 bp GGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATaGCTCCCATTCATCCCAGATTCACCACATCGGGCA +
Preference number: 3 (lower is better)
Translates to: GGRRRKKRSTSL*LPFIPDSPHRA
Trigger: TGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR GCA 72 bp GGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATaGTCACATGACACTGATCAACATAGGGAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GRWGMWQATIGL*SHDTDQHREEE
Trigger: CTCTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR GCA 72 bp TGGCAAAAGCTTATGAGCTGCTACTTCATTCAGAAGTaGAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: WQKLMSCYFIQK*NPRATGESRAR
Trigger: CCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGCAGCTCATAAGCTTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR GCA 72 bp CCCAAAAGACAGAGCCTGTGGCAAAAGCTTATGAGCTaGTACTTCATTCAGAAGTGCAATCCCAGAGCAACA +
Preference number: 3 (lower is better)
Translates to: PKRQSLWQKLMS*YFIQKCNPRAT
Trigger: TGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGCAGCTCATAAGCTTTTGCCACAGGCTCTGTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTAATCTACTTTTTCCTTaGGATAGTGGTGGATCTTCC +
Preference number: 3 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSNLLFP*DSGGSS
Trigger: GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATT...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp GGCAAGCTACCATTGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGCATGACAAACAGGCTTaGTCTTCTAAGGTCATAGCT +
Preference number: 3 (lower is better)
Translates to: GKLPLAYAHMTLINIGRKHDKQA*SSKVIA
Trigger: AGCTATGACCTTAGAAGACAAAGCCTGTTTGTCATG...CTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATGTGGCAAGCTACCATaGGCTTATGCTCACATGACA +
Preference number: 3 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPCGKLP*AYAHMT
Trigger: TGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACA...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR GCA 72 bp GAGCAGAGGCCTCATCAGATTTCTAAGAACCATTCTTaGATTGATAACTCACCCCAGGTCTTGAAGACATCT +
Preference number: 3 (lower is better)
Translates to: EQRPHQISKNHS*IDNSPQVLKTS
Trigger: AGATGTCTTCAAGACCTGGGGTGAGTTATCAATGCAAGAATGGTTCTTAGAAATCTGATGAGGCCTCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR GCA 72 bp GCTTTCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTaGCTCCAACACCTTGAAAATCATCACATCATATCC +
Preference number: 3 (lower is better)
Translates to: AFKAAGSSWNRS*LQHLENHHIIS
Trigger: GGATATGATGTGATGATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR CCA 72 bp TCATCTCAGTCTGCTTTCAAAGCTGCTGGGAGTTCTTaGAACAGAAGTTGCCTCCAACACCTTGAAAATCAT +
Preference number: 3 (lower is better)
Translates to: SSQSAFKAAGSS*NRSCLQHLENH
Trigger: ATGATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGAAAGCAGACTGAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR-3UTR CAA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATGTGGGGCATAGATGTTaGATACAGCCATCGGGTAAA +
Preference number: 3 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNVGHRC*IQPSGK
Trigger: TTTACCCGATGGCTGTATCAAACATCTATGCCCCAC...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR TCA 72 bp TGTGGAACACAAGTATGCACCAACAGATACCATCACTaGGAGTTATCGAGGAGTTATTGCGTGAGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: CGTQVCTNRYHH*ELSRSYCVSLL
Trigger: AAGAAGACTCACGCAATAACTCCTCGATAACTCTCAGTGATGGTATCTGTTGGTGCATACTTGTGTTCCACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCAAATCTACTTTTTCCTTaGGATAGTGGTGGATCTTCC +
Preference number: 3 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPNLLFP*DSGGSS
Trigger: GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATT...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACACATGACAAACAGGCTTaGTCTTCTAAGGTCATAGCT +
Preference number: 3 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTHDKQA*SSKVIA
Trigger: AGCTATGACCTTAGAAGACAAAGCCTGTTTGTCATG...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTTGTGGCAAGCTACCATaGGCTTATGCTCACATGACA +
Preference number: 3 (lower is better)
Translates to: DSNFICRTTYKGFILKPGCGKLP*AYAHMT
Trigger: TGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACA...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR TCA 72 bp AGACCAGTAGCCCTATGCCATAGATGTCATATCCCTTaGGGCATATTAATCTACTTTTTCCTTTGGATAGTG +
Preference number: 3 (lower is better)
Translates to: RPVALCHRCHIP*GILIYFFLWIV
Trigger: CACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATATGACATCTATGGCATAGGGCTACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR TCA 72 bp CCCTTTTCAGTCATACCGAGGTTTACTGAAGTTAAATaGCTTGGACAAAGTCACATAGTTGGTAAATCAGAG +
Preference number: 3 (lower is better)
Translates to: PFSVIPRFTEVK*LGQSHIVGKSE
Trigger: CTCTGATTTACCAACTATGTGACTTTGTCCAAGTCATTTAACTTCAGTAAACCTCGGTATGACTGAAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR TCA 72 bp AGCATTATAATGCTAGTAAGTTCCAGGGTTAGGATATaGACCCAAGTCTTCTTGACTGTAAAGACTGTAATC +
Preference number: 3 (lower is better)
Translates to: SIIMLVSSRVRI*TQVFLTVKTVI
Trigger: GATTACAGTCTTTACAGTCAAGAAGACTTGGGTTCATATCCTAACCCTGGAACTTACTAGCATTATAATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR-3UTR CAA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTGGGCTAAGCACTAAGTaGTTATTGTTATTGTGGTTG +
Preference number: 3 (lower is better)
Translates to: DSNFICRTTYKGFILKPGGLSTK*LLLLWL
Trigger: CAACCACAATAACAATAACAACTTAGTGCTTAGCCC...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACGGCGCTCCCAGGTCCTaGCCGGCAGGGCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDGAPRS*PAGQGA
Trigger: AGCCCCTTGCCCTGCCGGTCAGGACCTGGGAGCGCC...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGGACATCTCTGGAGACTaGGCGCAGCGGGCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALDISGD*AQRALP
Trigger: TGGGAGCGCCCGCTGCGCCCAGTCTCCAGAGATGTC...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCGACATCTCTGGAGACTaGGCGCAGCGGGCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPDISGD*AQRALP
Trigger: TGGGAGCGCCCGCTGCGCCCAGTCTCCAGAGATGTC...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACGCTTCTGCACATCGCTaGGCTCGGCAAGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHASAHR*ARQGAR
Trigger: CCGAGCTCCTTGCCGAGCTCAGCGATGTGCAGAAGC...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCGCTCGGCGAGGCAGCTaGTCCTCCTTAAACCAGCGG +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSARRGS*SSLNQR
Trigger: CCGCTGGTTTAAGGAGGAGCAGCTGCCTCGCCGAGC...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCGAACGCCCGAGGGGCTaGTCTGCACTACGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPERPRG*SALRTA
Trigger: AGCAGTCCGTAGTGCAGAGCAGCCCCTCGGGCGTTC...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATAGCACGGAGCGAGTaGTGTCGGTACTCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPIARSE*CRYSSR
Trigger: CCGGGACGAGTACCGACACCACTCGCTCCGTGCTAT...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACGCGACCGTGCCCTTCTaGATAGCACGGAGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDATVPF*IARSEW
Trigger: CCACTCGCTCCGTGCTATCCAGAAGGGCACGGTCGC...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACCAGCCGCGCCCTCTCTaGAATCAGCTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHQPRPL*NQLLRD
Trigger: ATCTCTGAGGAGCTGATTGCAGAGAGGGCGCGGCTG...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTACCCAAAGGGGCAGGTaGGACTCTGCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSTQRGR*DSARGS
Trigger: GCTCCCCCTTGCAGAGTCCCACCTGCCCCTTTGGGT...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCACGGTGTCAATCAGCTaGCCTGGAAACTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPTVSIS*PGNWGS
Trigger: TGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGT...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGACGGTGTCAATCAGCTaGCCTGGAAACTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALTVSIS*PGNWGS
Trigger: TGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGT...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GGCAAGCTACCATTGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGGGGCAGGTGGGACTCTaGAAGGGGGAGCAACCACCA +
Preference number: 4 (lower is better)
Translates to: GKLPLAYAHMTLINIGRKGQVGL*KGEQPP
Trigger: TGGTGGTTGCTCCCCCTTGCAGAGTCCCACCTGCCC...CTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTCGTGCAGGATCTGCTaGAGCATGATGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDSCRIC*SMMPPG
Trigger: CCCAGGTGGCATCATGCTGCAGCAGATCCTGCACGA...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCGTTCCTCCAGGACTTTaGCAGCCTTGCGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSVPPGL*QPCGLP
Trigger: TGGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAAC...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCATAGCACGGAGCGAGTaGTGTCGGTACTCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFIARSE*CRYSSR
Trigger: CCGGGACGAGTACCGACACCACTCGCTCCGTGCTAT...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGGCGACCGTGCCCTTCTaGATAGCACGGAGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMATVPF*IARSEW
Trigger: CCACTCGCTCCGTGCTATCCAGAAGGGCACGGTCGC...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCTTCTGTCCCGATCGCTaGGATGAGACCAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPFCPDR*DETSSP
Trigger: AGGGCTACTGGTCTCATCCCAGCGATCGGGACAGAA...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCTGCAGCAATGGGAGATaGGGCATGTGGCAAGCTACC +
Preference number: 4 (lower is better)
Translates to: PAYDSHSSQIHHIGHSLPCSNGR*GMWQAT
Trigger: GGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCA...GGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAGGAACCAGGGGGCGATaGACTTGGTGTTCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGGTRGR*TWCSSR
Trigger: TCGAGAGGAACACCAAGTTCATCGCCCCCTGGTTCC...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGTGTCCGCAGGGTTCCTaGAGTAACTCTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALCPQGS*SNSPPE
Trigger: TTCAGGAGGAGAGTTACTTCAGGAACCCTGCGGACA...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCAGGAGCCATTGGATGTaGTTGTCACTCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGRSHWM*LSLAAA
Trigger: TGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCT...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS-3UTR GCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCGGACTTTGGCAGCCTTaGGGTCTTCCATCTCCACTT +
Preference number: 4 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGGLWQP*GLPSPL
Trigger: AAGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCC...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GGCGAGTGGCAAAAGAAGAGGTTAAATAAGGAAGGCAGGACGGTGTCAATCAGCAGCTCCTTCGCCCTCTaGTCTTCCTGGAGGCGAATC +
Preference number: 4 (lower is better)
Translates to: GEWQKKRLNKEGRTVSISSSFAL*SSWRRI
Trigger: GATTCGCCTCCAGGAAGAGCAGAGGGCGAAGGAGCT...GCTGATTGACACCGTCCTGCCTTCCTTATTTAACCTCTTCTTTTGCCACTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGTCTGTCTTATGCCTCTaGAGCAATGGGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALSVLCL*SNGRWG
Trigger: GCCCCATCTCCCATTGCTGCAGAGGCATAAGACAGA...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp GGCGAGTGGCAAAAGAAGAGGTTAAATAAGGAAGGCAGGACGGTGTCAATCAGCCCTCATCAGCCGCCTTaGACCGGCGCAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GEWQKKRLNKEGRTVSISPHQPP*TGATVL
Trigger: AAGAACAGTTGCGCCGGTCCAAGGCGGCTGATGAGG...GCTGATTGACACCGTCCTGCCTTCCTTATTTAACCTCTTCTTTTGCCACTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTCAGATGGTAGTCTGGTaGGCTGTCCCTCTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSQMVVW*AVPLSA
Trigger: TGCGGACAGAGGGACAGCCCACCAGACTACCATCTG...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAGGGGTTCTGAGACAATaGGAAGGGCCCAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGGVLRQ*EGPKPP
Trigger: TGGAGGCTTGGGCCCTTCCCATTGTCTCAGAACCCC...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACAGCATGATGCCACCTaGGATGCACGCACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGQHDAT*DARTRR
Trigger: CCTTCTGGTGCGTGCATCCCAGGTGGCATCATGCTG...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCACAGGGCCTTCTCCCATaGTCCAGACCCAGACCTCGC +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPQGLLP*SRPRPR
Trigger: GCGAGGTCTGGGTCTGGATCATGGGAGAAGGCCCTG...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGCAGGGCCTTCTCCCATaGTCCAGACCCAGACCTCGC +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRQGLLP*SRPRPR
Trigger: GCGAGGTCTGGGTCTGGATCATGGGAGAAGGCCCTG...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGCATCACCTGGGGTTCTaGGACAATGGGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMHHLGF*DNGKGP
Trigger: TGGGCCCTTCCCATTGTCTCAGAACCCCAGGTGATG...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGTGGTCTTTGGAGGCCTaGGACCCTCGTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRWSLEA*DPRPGP
Trigger: TGGCCCAGGACGAGGGTCTCAGGCCTCCAAAGACCA...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACAGCTTCCCTCTGTGCCTaGAGCCGCGCCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTASLCA*SRALSA
Trigger: TGCAGAGAGGGCGCGGCTGCAGGCACAGAGGGAAGC...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTCTCAGCTTCCCTCTGTaGCTGCAGCCGCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVLSFPL*LQPRPL
Trigger: GAGAGGGCGCGGCTGCAGGCACAGAGGGAAGCTGAG...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCACGGGGCCACTCTCGGTaGCCCTTCTCTGTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPRGHSR*PFSVQH
Trigger: ATGCTGCACAGAGAAGGGGCACCGAGAGTGGCCCCG...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTAGGAGCCATTGGATGTaGTTGTCACTCGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSRSHWM*LSLAAR
Trigger: GCGAGCAGCGAGTGACAAGCACATCCAATGGCTCCT...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTGCCCCTAGGAGCCATTaGATGTGCTTGTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSAPRSH*MCLSLA
Trigger: AGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGC...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGATCCGGGCTTTCTCATTaGCCAGAGCATCCCGGAACT +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGSGLSH*PEHPGT
Trigger: AGTTCCGGGATGCTCTGGCCAATGAGAAAGCCCGGA...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp GGCAAGCTACCATTGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGCCCGGAACTTCTTGGTaGTCTCTGCCTCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GKLPLAYAHMTLINIGRKPGTSW*SLPPSV
Trigger: GACAGAAGGAGGCAGAGATCACCAAGAAGTTCCGGG...CTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGCCCGGAACATGGAGCTaGGGCCAGCGACCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLPGTWS*GQRPCP
Trigger: AGGGCACGGTCGCTGGCCTCAGCTCCATGTTCCGGG...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCTGTCCGCAGGGTTCCTaGAGTAACTCTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFCPQGS*SNSPPE
Trigger: TTCAGGAGGAGAGTTACTTCAGGAACCCTGCGGACA...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACGGGAAGCCATGGAGCTaGGTGAGTTGCAAAATTGAT +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHGKPWS*VSCKID
Trigger: ATCAATTTTGCAACTCACTCAGCTCCATGGCTTCCC...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCAGGATCTGCTGCAGCATaGTGCCACCTGGGATGCACG +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPGSAAA*CHLGCT
Trigger: CGTGCATCCCAGGTGGCATCATGCTGCAGCAGATCC...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp TCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTGCCTCCAACACCTTGAAAATCCAGCCGCGCCCTCTCTaGAATCAGCTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SKLLGVLGTEVASNTLKIQPRPL*NQLLRD
Trigger: ATCTCTGAGGAGCTGATTGCAGAGAGGGCGCGGCTG...GATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCCATCTGGACTTTGGCAGCCTTaGGGTCTTCCATCTCCACTT +
Preference number: 4 (lower is better)
Translates to: PMTPIHPRFTTSGIHFPSGLWQP*GLPSPL
Trigger: AAGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCC...AGATGGGAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCATCATTGGAGTAACCTaGATAGAGAGGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSIIGVT*IERATS
Trigger: GGATGTGGCCCTCTCTATGCAGGTTACTCCAATGAT...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCTCTGTCTTATGCCTCTaGAGCAATGGGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFSVLCL*SNGRWG
Trigger: GCCCCATCTCCCATTGCTGCAGAGGCATAAGACAGA...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACAGCACAATTCCCGCCCTaGGACACGGCACGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTAQFPP*DTARLL
Trigger: AAGCAGCCGTGCCGTGTCCCAGGGCGGGAATTGTGC...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS-3UTR CCA 90 bp CTCAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTAGTTCCTCCAGGACTTTaGCAGCCTTGCGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LRIVPPGGRRRKKRSTSLVPPGL*QPCGLP
Trigger: TGGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAAC...TAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACCTCTTGAATTCCTCGTaGATGCGTTCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDLLNSS*MRSSRT
Trigger: AGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAG...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGATGCCTCTGCAGCAATaGGAGATGGGGCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMMPLQQ*EMGHVA
Trigger: TGCCACATGCCCCATCTCCCATTGCTGCAGAGGCAT...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
3UTR CAA 72 bp GCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATaGGCTTATGCTCACATGACACTGATCAACATAGGG +
Preference number: 4 (lower is better)
Translates to: AAMGDGACGKLP*AYAHMTLINIG
Trigger: CCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCTCCAGGGTTAGGATATaGACCCAAGTCTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSSRVRI*TQVFLT
Trigger: AGTCAAGAAGACTTGGGTTCATATCCTAACCCTGGA...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGAATCTAAGGAATAGGTaGGGCAAGAGAAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALNLRNR*GKRRSG
Trigger: CCCACTTCTTCTCTTGCCTCACCTATTCCTTAGATT...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACAATCTAAGGAATAGGTaGGGCAAGAGAAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHNLRNR*GKRRSG
Trigger: CCCACTTCTTCTCTTGCCTCACCTATTCCTTAGATT...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGGCTTCCCTCTGTGCCTaGAGCCGCGCCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLASLCA*SRALSA
Trigger: TGCAGAGAGGGCGCGGCTGCAGGCACAGAGGGAAGC...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCCTCAGCTTCCCTCTGTaGCTGCAGCCGCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSLSFPL*LQPRPL
Trigger: GAGAGGGCGCGGCTGCAGGCACAGAGGGAAGCTGAG...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCATCTCTTCTGTCTTATaGCTCTGCAGCAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGISSVL*LCSNGR
Trigger: TCTCCCATTGCTGCAGAGGCATAAGACAGAAGAGAT...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACGTCTGCTTTCAAAGCTaGTGGGAGTTCTTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDVCFQS*WEFLEQ
Trigger: CTGTTCCAAGAACTCCCAGCAGCTTTGAAAGCAGAC...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCTCTTGAATTCCTCGTaGATGCGTTCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFLLNSS*MRSSRT
Trigger: AGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAG...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCACAGATGGTAGTCTGGTaGGCTGTCCCTCTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPQMVVW*AVPLSA
Trigger: TGCGGACAGAGGGACAGCCCACCAGACTACCATCTG...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACAAAAGACAGAGCCTGTaGCAAAAGCTTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHKRQSL*QKLMSC
Trigger: GCAGCTCATAAGCTTTTGCCACAGGCTCTGTCTTTT...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATAGTCCCAGCCCTGCCTaGGCTGGTAGGTGTCGAGTG +
Preference number: 4 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNSPSPA*AGRCRV
Trigger: CACTCGACACCTACCAGCCCAGGCAGGGCTGGGACT...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGCTGAGACCCTCGTCCTaGGCCAGGGCCTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLLRPSS*ARASQV
Trigger: GACTTGGGAGGCCCTGGCCCAGGACGAGGGTCTCAG...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAGCTGCTGGGAGTTCTTaGAACAGAAGTTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGAAGSS*NRSCLQ
Trigger: TTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGC...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGCCCGGAACTTCTTGGTaGTCTCTGCCTCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRPGTSW*SLPPSV
Trigger: GACAGAAGGAGGCAGAGATCACCAAGAAGTTCCGGG...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp GTGATAATGGAGATTATGAAAGATGCAGCATTTATGTCCTCCATAGAAATCCTTCCCGGAACATGGAGCTaGGGCCAGCGACCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VIMEIMKDAAFMSSIEILPGTWS*GQRPCP
Trigger: AGGGCACGGTCGCTGGCCTCAGCTCCATGTTCCGGG...AAGGATTTCTATGGAGGACATAAATGCTGCATCTTTCATAATCTCCATTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTGGAACCAGGGGGCGATaGACTTGGTGTTCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVGTRGR*TWCSSR
Trigger: TCGAGAGGAACACCAAGTTCATCGCCCCCTGGTTCC...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCTGGGGCATAGATGTTTaGTACAGCCATCGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFWGIDV*YSHRVK
Trigger: CTTTACCCGATGGCTGTATCAAACATCTATGCCCCA...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGCGATCTACCAGCCTATaGCTCCCATTCATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMRSTSL*LPFIPD
Trigger: ATCTGGGATGAATGGGAGTCATAGGCTGGTAGATCG...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GGCGAGTGGCAAAAGAAGAGGTTAAATAAGGAAGGCAGGACGGTGTCAATCAGCCAACTCATCTCAGTCTaGTTTCAAAGCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GEWQKKRLNKEGRTVSISQLISV*FQSCWE
Trigger: CTCCCAGCAGCTTTGAAAGCAGACTGAGATGAGTTG...GCTGATTGACACCGTCCTGCCTTCCTTATTTAACCTCTTCTTTTGCCACTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGGACAGAGCTAATCATTaGAGTAACCTGCATAGAGAG +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALDRANH*SNLHRE
Trigger: CTCTCTATGCAGGTTACTCCAATGATTAGCTCTGTC...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCAATGCCTCTGCAGCAATaGGAGATGGGGCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPMPLQQ*EMGHVA
Trigger: TGCCACATGCCCCATCTCCCATTGCTGCAGAGGCAT...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACAATGGGTTCTTATCCTaGATTCCCCAAAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHNGFLS*IPQKTE
Trigger: CTCTGTCTTTTGGGGAATCCAGGATAAGAACCCATT...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CTCAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTACTTCCTCTTTCCTCTTaGATTCCTCGTGGATGCGTT +
Preference number: 4 (lower is better)
Translates to: LRIVPPGGRRRKKRSTSLLPLSS*IPRGCV
Trigger: AACGCATCCACGAGGAATTCAAGAGGAAAGAGGAAG...TAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCGAGAAGTTCTTAAGCTaGGTTCAAAAACAGGATACC +
Preference number: 4 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGEKFLS*VQKQDT
Trigger: GGTATCCTGTTTTTGAACTCAGCTTAAGAACTTCTC...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCAGCCATGGAGCTGAGTaGGTTGCAAAATTGATATTA +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSSHGAE*VAKLIL
Trigger: TAATATCAATTTTGCAACTCACTCAGCTCCATGGCT...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAAGACCAGTAGCCCTATaGCATAGATGTCATATCCCT +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGRPVAL*HRCHIP
Trigger: AGGGATATGACATCTATGGCATAGGGCTACTGGTCT...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCTCTAAGAACCATTCTTaGATTGATAACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSSKNHS*IDNSPQ
Trigger: CTGGGGTGAGTTATCAATGCAAGAATGGTTCTTAGA...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACACAGTTGGCCTCAGCTTaGAGCCAGCGACGAACTCAT +
Preference number: 4 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTQLASA*SQRRTH
Trigger: ATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTG...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGCCCGAGGGGCTGCTCTaGACTACGGACTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLPEGLL*TTDCSI
Trigger: GATTGAGCAGTCCGTAGTGCAGAGCAGCCCCTCGGG...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGAAGAGGATGTGCTTCTaGACATCGCTGAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRKRMCF*TSLSSA
Trigger: TGCCGAGCTCAGCGATGTGCAGAAGCACATCCTCTT...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACTCTTGGAACAGAAGTTaGCTCCAACACCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHSWNRS*LQHLEN
Trigger: ATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGA...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATGAGAAGATTCCTCCGTaGAGCCCGTCCCCGCACAAT +
Preference number: 4 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNEKIPP*SPSPHN
Trigger: ATTGTGCGGGGACGGGCTCCACGGAGGAATCTTCTC...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS-3UTR CCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTCAACAGATGGTAGTCTaGTGGGCTGTCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVQQMVV*WAVPLS
Trigger: GGACAGAGGGACAGCCCACCAGACTACCATCTGTTG...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCTGGATTATTAAAACATaGTCCACGCACTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSWIIKT*STHCKS
Trigger: GCTCTTACAGTGCGTGGACCATGTTTTAATAATCCA...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGATGCTTTCAAAGCTGCTaGGAGTTCTTGGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGCFQSC*EFLEQK
Trigger: CTTCTGTTCCAAGAACTCCCAGCAGCTTTGAAAGCA...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCACGATCTACCAGCCTATaGCTCCCATTCATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPRSTSL*LPFIPD
Trigger: ATCTGGGATGAATGGGAGTCATAGGCTGGTAGATCG...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGCACTTGGTTTCATCATaGCTGGTTGCTCGATCTTAC +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMHLVSS*LVARSY
Trigger: GTAAGATCGAGCAACCAGTCATGATGAAACCAAGTG...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGCTTCTTGGTGATCTCTaGCTCCTTCTGTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRLLGDL*LLLSPE
Trigger: CTCTGGAGACAGAAGGAGGCAGAGATCACCAAGAAG...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGAGCTACCATTGGCTTATaGTCACATGACACTGATCAA +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGATIGL*SHDTDQ
Trigger: TTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGC...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GGCGAGTGGCAAAAGAAGAGGTTAAATAAGGAAGGCAGGACGGTGTCAATCAGCGCTACCATTGGCTTATaGTCACATGACACTGATCAA +
Preference number: 4 (lower is better)
Translates to: GEWQKKRLNKEGRTVSISATIGL*SHDTDQ
Trigger: TTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGC...GCTGATTGACACCGTCCTGCCTTCCTTATTTAACCTCTTCTTTTGCCACTCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp ATACAGCCATCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATCTCTGCACTACGGACTaGTCAATCCGGGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: IQPSGKVNRSLTFLESIHLCTTD*SIRGHS
Trigger: AGAGTGGCCCCGGATTGAGCAGTCCGTAGTGCAGAG...ATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGATGGCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATCAACAGATGGTAGTCTaGTGGGCTGTCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNQQMVV*WAVPLS
Trigger: GGACAGAGGGACAGCCCACCAGACTACCATCTGTTG...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTGTCAATCAGCTGCCCTaGAAACTGGGGCTCACCTTA +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVVNQLP*KLGLTL
Trigger: TAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGAC...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTCTTCTTGGTGATCTCTaGCTCCTTCTGTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVLLGDL*LLLSPE
Trigger: CTCTGGAGACAGAAGGAGGCAGAGATCACCAAGAAG...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGTTATCGAGGAGTTATTaGGTGAGTCTTCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALLSRSY*VSLLVN
Trigger: ATTAACAAGAAGACTCACGCAATAACTCCTCGATAA...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGTGTGGAACACAAGTATaGACCAACAGATACCATCAC +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMCGTQV*TNRYHH
Trigger: GTGATGGTATCTGTTGGTGCATACTTGTGTTCCACA...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp GAATTATTTTGGATTATTAAAACATGGTCCACGCACTGTAAGAGCTCGGTTTACCCTCATCAGCCGCCTTaGACCGGCGCAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ELFWIIKTWSTHCKSSVYPHQPP*TGATVL
Trigger: AAGAACAGTTGCGCCGGTCCAAGGCGGCTGATGAGG...GTAAACCGAGCTCTTACAGTGCGTGGACCATGTTTTAATAATCCAAAATAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ACTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACATGAAAGAGTTGCATaGGCTATTAGCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TDPATTWFHHDWLLDLTGHERVA*AISNFC
Trigger: ACAGAAATTGCTAATAGCTCATGCAACTCTTTCATG...TCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGAACAGATACCATCACTaGGAGTTATCGAGGAGTTAT +
Preference number: 4 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMNRYHH*ELSRSY
Trigger: ATAACTCCTCGATAACTCTCAGTGATGGTATCTGTT...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGCACTTGGTTTCATCATaGCTGGTTGCTCGATCTTAC +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRHLVSS*LVARSY
Trigger: GTAAGATCGAGCAACCAGTCATGATGAAACCAAGTG...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACAGGGAAGCCATGGAGCTaGGTGAGTTGCAAAATTGAT +
Preference number: 4 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTGKPWS*VSCKID
Trigger: ATCAATTTTGCAACTCACTCAGCTCCATGGCTTCCC...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTAGCTCCTTCGCCCTCTaGTCTTCCTGGAGGCGAATC +
Preference number: 4 (lower is better)
Translates to: DSNFICRTTYKGFILKPGSSFAL*SSWRRI
Trigger: GATTCGCCTCCAGGAAGAGCAGAGGGCGAAGGAGCT...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTATCATTGGAGTAACCTaGATAGAGAGGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVIIGVT*IERATS
Trigger: GGATGTGGCCCTCTCTATGCAGGTTACTCCAATGAT...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCAATCTCTTCTGTCTTATaGCTCTGCAGCAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPISSVL*LCSNGR
Trigger: TCTCCCATTGCTGCAGAGGCATAAGACAGAAGAGAT...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp GAATTATTTTGGATTATTAAAACATGGTCCACGCACTGTAAGAGCTCGGTTTACGCCCCTAGGAGCCATTaGATGTGCTTGTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: ELFWIIKTWSTHCKSSVYAPRSH*MCLSLA
Trigger: AGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGC...GTAAACCGAGCTCTTACAGTGCGTGGACCATGTTTTAATAATCCAAAATAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCATCTACTTTTTCCTTTaGATAGTGGTGGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFIYFFL*IVVDLP
Trigger: TGGAAGATCCACCACTATCCAAAGGAAAAAGTAGAT...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATTCTTTTCCTTTCTGTCCCGATCGCTaGGATGAGACCAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGKVNRSLTFLESIHSFPFCPDR*DETSSP
Trigger: AGGGCTACTGGTCTCATCCCAGCGATCGGGACAGAA...AGGAAAAGAATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGAAAAGACAGAGCCTGTaGCAAAAGCTTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRKRQSL*QKLMSC
Trigger: GCAGCTCATAAGCTTTTGCCACAGGCTCTGTCTTTT...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTGCCTCCAACACCTTGAAAATCGAGAAGTTCTTAAGCTaGGTTCAAAAACAGGATACC +
Preference number: 4 (lower is better)
Translates to: SKLLGVLGTEVASNTLKIEKFLS*VQKQDT
Trigger: GGTATCCTGTTTTTGAACTCAGCTTAAGAACTTCTC...GATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATTGGGGCATAGATGTTTaGTACAGCCATCGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNWGIDV*YSHRVK
Trigger: CTTTACCCGATGGCTGTATCAAACATCTATGCCCCA...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GGCAAGCTACCATTGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGAAAATATATGAGACATaGAGAAATTGCAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GKLPLAYAHMTLINIGRKKIYET*RNCRPQ
Trigger: TTGGGGCCTGCAATTTCTGCATGTCTCATATATTTT...CTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp CTCAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTAAAAGATAGAGGCGAGTaGCAAAAGAAGAGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: LRIVPPGGRRRKKRSTSLKDRGE*QKKRLN
Trigger: ATTTAACCTCTTCTTTTGCCACTCGCCTCTATCTTT...TAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGTGTCTTGGCATCACCTaGGGTTCTGAGACAATGGGA +
Preference number: 4 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLCLGIT*GSETMG
Trigger: TCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACA...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTTGCAGCATTGTCAGTTaGCCTCAGCTTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DSNFICRTTYKGFILKPGCSIVS*PQLAAS
Trigger: GCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCA...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
3UTR CAA 72 bp CTGGGAGTTCTTGGAACAGAAGTTGCCTCCAACACCTaGAAAATCATCACATCATATCCCCTGATACATCAT +
Preference number: 4 (lower is better)
Translates to: LGVLGTEVASNT*KIITSYPLIHH
Trigger: ATGATGTATCAGGGGATATGATGTGATGATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTGAAGGCCATAGGATTTaGGATGAGAAGTTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVEGHRI*DEKFLS
Trigger: GCTTAAGAACTTCTCATCTCAAATCCTATGGCCTTC...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCAAGCCATGGAGCTGAGTaGGTTGCAAAATTGATATTA +
Preference number: 4 (lower is better)
Translates to: WFHHDWLLDLTGLSSTRPSHGAE*VAKLIL
Trigger: TAATATCAATTTTGCAACTCACTCAGCTCCATGGCT...TGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGTTGCCTCCAACACCTTaGAAATCATCACATCATATC +
Preference number: 4 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRLPPTP*KSSHHI
Trigger: GATATGATGTGATGATTTTCAAGGTGTTGGAGGCAA...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp TCAAAGCTGCTGGGAGTTCTTGGAACAGAAGTTGCCTCCAACACCTTGAAAATCGGAGATTATGAAAGATaGAGCATTTATGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SKLLGVLGTEVASNTLKIGDYER*SIYVLH
Trigger: ATGGAGGACATAAATGCTGCATCTTTCATAATCTCC...GATTTTCAAGGTGTTGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTATGTCGTGCAGGATCTaGTGCAGCATGATGCCACCT +
Preference number: 4 (lower is better)
Translates to: DSNFICRTTYKGFILKPGMSCRI*CSMMPP
Trigger: AGGTGGCATCATGCTGCAGCAGATCCTGCACGACAT...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp GTGATAATGGAGATTATGAAAGATGCAGCATTTATGTCCTCCATAGAAATCCTTGGGAGATGGGGCATGTaGCAAGCTACCATTGGCTTA +
Preference number: 4 (lower is better)
Translates to: VIMEIMKDAAFMSSIEILGRWGM*QATIGL
Trigger: TAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCC...AAGGATTTCTATGGAGGACATAAATGCTGCATCTTTCATAATCTCCATTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACAAATGGGTTCTTATCCTaGATTCCCCAAAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTNGFLS*IPQKTE
Trigger: CTCTGTCTTTTGGGGAATCCAGGATAAGAACCCATT...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGTCCAGGGTTAGGATATaGACCCAAGTCTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLSRVRI*TQVFLT
Trigger: AGTCAAGAAGACTTGGGTTCATATCCTAACCCTGGA...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR GCA 90 bp GTGATAATGGAGATTATGAAAGATGCAGCATTTATGTCCTCCATAGAAATCCTTTCGATGTACATGTCGTaGAGGATCTGCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VIMEIMKDAAFMSSIEILSMYMS*RICCSM
Trigger: CATGCTGCAGCAGATCCTGCACGACATGTACATCGA...AAGGATTTCTATGGAGGACATAAATGCTGCATCTTTCATAATCTCCATTATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR TCA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCGAAGGCCATAGGATTTaGGATGAGAAGTTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSEGHRI*DEKFLS
Trigger: GCTTAAGAACTTCTCATCTCAAATCCTATGGCCTTC...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCACCAAGGCCAAAATATaGTTCAAAGATAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSTKAKI*FKDRGE
Trigger: CTCGCCTCTATCTTTGAATCATATTTTGGCCTTGGT...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATTCTTTTCCTAGACCAGTAGCCCTATaGCATAGATGTCATATCCCT +
Preference number: 4 (lower is better)
Translates to: SGKVNRSLTFLESIHSFPRPVAL*HRCHIP
Trigger: AGGGATATGACATCTATGGCATAGGGCTACTGGTCT...AGGAAAAGAATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTGGAGATTATGAAAGATaGAGCATTTATGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVGDYER*SIYVLH
Trigger: ATGGAGGACATAAATGCTGCATCTTTCATAATCTCC...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp TTCATCATGACTGGTTGCTCGATCTTACAGGACTGTCTTCTACAAGACCATACACACCAAACACAATGCTaGAAGCATTATAATGCTAGT +
Preference number: 4 (lower is better)
Translates to: FIMTGCSILQDCLLQDHTHQTQC*KHYNAS
Trigger: ACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTG...TGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCGAGCAACCAGTCATGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp ATACAGCCATCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATTACTTCATTCAGAAGTaGAATCCCAGAGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: IQPSGKVNRSLTFLESIHYFIQK*NPRATG
Trigger: TCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTA...ATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGATGGCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp GAATTATTTTGGATTATTAAAACATGGTCCACGCACTGTAAGAGCTCGGTTTACACCAAGGCCAAAATATaGTTCAAAGATAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: ELFWIIKTWSTHCKSSVYTKAKI*FKDRGE
Trigger: CTCGCCTCTATCTTTGAATCATATTTTGGCCTTGGT...GTAAACCGAGCTCTTACAGTGCGTGGACCATGTTTTAATAATCCAAAATAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTTTATCGAGGAGTTATTaGGTGAGTCTTCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVLSRSY*VSLLVN
Trigger: ATTAACAAGAAGACTCACGCAATAACTCCTCGATAA...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GTCTTCTTGACTGTAAAGACTGTAATCTTCTCTTCATCATATACTACCTCTGTGTACTTCATTCAGAAGTaGAATCCCAGAGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: VFLTVKTVIFSSSYTTSVYFIQK*NPRATG
Trigger: TCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTA...CACAGAGGTAGTATATGATGAAGAGAAGATTACAGTCTTTACAGTCAAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATAAAGATAGAGGCGAGTaGCAAAAGAAGAGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNKDRGE*QKKRLN
Trigger: ATTTAACCTCTTCTTTTGCCACTCGCCTCTATCTTT...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp GAATTATTTTGGATTATTAAAACATGGTCCACGCACTGTAAGAGCTCGGTTTACGACAGAGCTAATCATTaGAGTAACCTGCATAGAGAG +
Preference number: 4 (lower is better)
Translates to: ELFWIIKTWSTHCKSSVYDRANH*SNLHRE
Trigger: CTCTCTATGCAGGTTACTCCAATGATTAGCTCTGTC...GTAAACCGAGCTCTTACAGTGCGTGGACCATGTTTTAATAATCCAAAATAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR TCA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCCATGAAAGAGTTGCATaGGCTATTAGCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSHERVA*AISNFC
Trigger: ACAGAAATTGCTAATAGCTCATGCAACTCTTTCATG...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR GCA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTTCTAAGAACCATTCTTaGATTGATAACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: DSNFICRTTYKGFILKPGSKNHS*IDNSPQ
Trigger: CTGGGGTGAGTTATCAATGCAAGAATGGTTCTTAGA...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp GTCTTCTTGACTGTAAAGACTGTAATCTTCTCTTCATCATATACTACCTCTGTGATCTACTTTTTCCTTTaGATAGTGGTGGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: VFLTVKTVIFSSSYTTSVIYFFL*IVVDLP
Trigger: TGGAAGATCCACCACTATCCAAAGGAAAAAGTAGAT...CACAGAGGTAGTATATGATGAAGAGAAGATTACAGTCTTTACAGTCAAGAAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CCA 90 bp GACAGTAATTTCATTTGCAGGACAACTTACAAGGGATTTATTTTAAAGCCAGGTTGGATTATTAAAACATaGTCCACGCACTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: DSNFICRTTYKGFILKPGWIIKT*STHCKS
Trigger: GCTCTTACAGTGCGTGGACCATGTTTTAATAATCCA...ACCTGGCTTTAAAATAAATCCCTTGTAAGTTGTCCTGCAAATGAAATTACTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CCA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCTTCAGGGTTCGGCACTaGAATTATTTTGGATTATTA +
Preference number: 4 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSFRVRH*NYFGLL
Trigger: TAATAATCCAAAATAATTCCAGTGCCGAACCCTGAA...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS CCA 90 bp TGGATAGCACGGAGCGAGTGGTGTCGGTACTCGTCCCGGGCGCGCTaGGCTCGGCGGCTCCTCTCCTCATCAGCCGCCTTGGACCGGCGC +
Preference number: 5 (lower is better)
Translates to: WIARSEWCRYSSRAR*ARRLLSSSAALDRR
Trigger: GCGCCGGTCCAAGGCGGCTGATGAGGAGAGGAGCCGCCGAGCCCAGCGCGCCCGGGACGAGTACCGACACCACTCGCTCCGTGCTATCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CCA 90 bp GAGCTGAGGCCAGCGACCGTGCCCTTCTGGATAGCACGGAGCGAGTaGTGTCGGTACTCGTCCCGGGCGCGCTGGGCTCGGCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ELRPATVPFWIARSE*CRYSSRARWARRLL
Trigger: GAGGAGCCGCCGAGCCCAGCGCGCCCGGGACGAGTACCGACACCACTCGCTCCGTGCTATCCAGAAGGGCACGGTCGCTGGCCTCAGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CCA 90 bp CCAAGCTCCCGGAACATGGAGCTGAGGCCAGCGACCGTGCCCTTCTaGATAGCACGGAGCGAGTGGTGTCGGTACTCGTCCCGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: PSSRNMELRPATVPF*IARSEWCRYSSRAR
Trigger: GCGCGCCCGGGACGAGTACCGACACCACTCGCTCCGTGCTATCCAGAAGGGCACGGTCGCTGGCCTCAGCTCCATGTTCCGGGAGCTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS GCA 90 bp GGGCTGCTCTGCACTACGGACTGCTCAATCCGGGGCCACTCTCGGTaGCCCTTCTCTGTGCAGCATTGTCAGTTGGCCTCAGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLLCTTDCSIRGHSR*PFSVQHCQLASACS
Trigger: GCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGGGCACCGAGAGTGGCCCCGGATTGAGCAGTCCGTAGTGCAGAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 90 bp GTCGATGTACATGTCGTGCAGGATCTGCTGCAGCATGATGCCACCTaGGATGCACGCACCAGAAGGGCAGCCAGCAGGGGAAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VDVHVVQDLLQHDAT*DARTRRAASRGSRA
Trigger: GGCCCTGCTTCCCCTGCTGGCTGCCCTTCTGGTGCGTGCATCCCAGGTGGCATCATGCTGCAGCAGATCCTGCACGACATGTACATCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 90 bp TCACCAAGCACGGCATCCCAGGAGAGCCCATGTCTTGGCATCACCTaGGGTTCTGAGACAATGGGAAGGGCCCAAGCCTCCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SPSTASQESPCLGIT*GSETMGRAQASSSA
Trigger: GGCTGAGCTGGAGGCTTGGGCCCTTCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACATGGGCTCTCCTGGGATGCCGTGCTTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS TCA 90 bp CACGGCATCCCAGGAGAGCCCATGTCTTGGCATCACCTGGGGTTCTaGGACAATGGGAAGGGCCCAAGCCTCCAGCTCAGCCAGGAAATG +
Preference number: 5 (lower is better)
Translates to: HGIPGEPMSWHHLGF*DNGKGPSLQLSQEM
Trigger: CATTTCCTGGCTGAGCTGGAGGCTTGGGCCCTTCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACATGGGCTCTCCTGGGATGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 90 bp CCCATGATCCAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTaGATGTGCTTGTCACTCGCTGCAGCATCTGGAGAGCCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PMIQTQTSPSAPRSH*MCLSLAAASGEPPE
Trigger: CTCAGGAGGCTCTCCAGATGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTGGATCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS CCA 90 bp CCCATGATCCAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTaGATGTGCTTGTCACTCGCTGCTCGCTTGGTCTTTGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: PMIQTQTSPSAPRSH*MCLSLAARLVFGGL
Trigger: CAGGCCTCCAAAGACCAAGCGAGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTGGATCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS TCA 90 bp CCTCAGAGATCTCTTCGTAGGGCTTGTCACCAGGGCCTTCTCCCATaGTCCAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTGGA +
Preference number: 5 (lower is better)
Translates to: PQRSLRRACHQGLLP*SRPRPRHLPLGAIG
Trigger: TCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTGGATCATGGGAGAAGGCCCTGGTGACAAGCCCTACGAAGAGATCTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS GCA 90 bp ATCCAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTGGATGTaGTTGTCACTCGCTGCAGCATCTGGAGAGCCTCCTGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: IQTQTSPSAPRSHWM*LSLAAASGEPPESS
Trigger: AGAGGACTCAGGAGGCTCTCCAGATGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS GCA 90 bp GCGATGAACTTGGTGTTCCTCTCGAAGCCAGCTCGGCGAGGCAGCTaGTCCTCCTTAAACCAGCGGACGATGACATCTCTGGAGACTGGG +
Preference number: 5 (lower is better)
Translates to: AMNLVFLSKPARRGS*SSLNQRTMTSLETG
Trigger: CCCAGTCTCCAGAGATGTCATCGTCCGCTGGTTTAAGGAGGAGCAGCTGCCTCGCCGAGCTGGCTTCGAGAGGAACACCAAGTTCATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000372150.7
ENST00000646907.2
CDS CCA 90 bp TGGACCGGCGCAACTGTTCTTCCCACTCTCGCTCCTCTTTCTCACTaGCTTGGCAATGCAGCTGAGCCTGCTTCAGGGTCCAGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: WTGATVLPTLAPLSH*LGNAAEPASGSSRA
Trigger: AGCTCTACTGGACCCTGAAGCAGGCTCAGCTGCATTGCCAAGCCAGTGAGAAAGAGGAGCGAGAGTGGGAAGAACAGTTGCGCCGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS TCA 90 bp GCTCCTCCCGCATTTTGTAGAAGAGGATGTGCTTCTGCACATCGCTaGGCTCGGCAAGGAGCTCGGGGTCGATGTACATGTCGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: APPAFCRRGCASAHR*ARQGARGRCTCRAG
Trigger: TCCTGCACGACATGTACATCGACCCCGAGCTCCTTGCCGAGCTCAGCGATGTGCAGAAGCACATCCTCTTCTACAAAATGCGGGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS GCA 90 bp TCTCGGTGCCCCTTCTCTGTGCAGCATTGTCAGTTGGCCTCAGCTTaGAGCCAGCGACGAACTCATCTCCTCTACCCAGGACAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: SRCPFSVQHCQLASA*SQRRTHLLYPGQQK
Trigger: CTTTTGCTGTCCTGGGTAGAGGAGATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGGGCACCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS TCA 90 bp CTTTCTGCAGGCGGTAGGAGAGGGTGTAACCCCAGATTTTCTCACTaGCCCGGACCAGGAATGCTCCCTCAGTCATGTTCTCCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LSAGGRRGCNPRFSH*PGPGMLPQSCSPGE
Trigger: CTCTCCTGGAGAACATGACTGAGGGAGCATTCCTGGTCCGGGTCAGTGAGAAAATCTGGGGTTACACCCTCTCCTACCGCCTGCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS-3UTR CAA 90 bp TGGTCCACGCACTGTAAGAGCTCGGTTTACGGCAGCCATGACAAACAGGCTTTGGGTGGTGGTAGAGTCTaGCCTCCTGCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: WSTHCKSSVYGSHDKQALGGGRV*PPAHGS
Trigger: AGAGCCATGAGCAGGAGGCAAGACTCTACCACCACC...CAAAGCCTGTTTGTCATGGCTGCCGTAAACCGAGCTCTTACAGTGCGTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCTCAGTTGGCCTCAGCTaGCAGCCAGCGACGAACTCA +
Preference number: 5 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGSVGLS*QPATNS
Trigger: TGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGA...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CAA 90 bp CAGGACGGTGTCAATCAGCTGCCCTGGAAACTGGGGCTCACCTTAGATAATTCCGTGCAGCATTGTCAGTaGGCCTCAGCTTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QDGVNQLPWKLGLTLDNSVQHCQ*ASACSQ
Trigger: CTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCAC...GGAATTATCTAAGGTGAGCCCCAGTTTCCAGGGCAGCTGATTGACACCGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS GCA 90 bp GGAGAGGGTGTAACCCCAGATTTTCTCACTGACCCGGACCAGGAATaGTCCCTCAGTCATGTTCTCCAGGAGAGCTTCTGCATCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GEGVTPDFLTDPDQE*SLSHVLQESFCIFS
Trigger: CGAGAAGATGCAGAAGCTCTCCTGGAGAACATGACTGAGGGAGCATTCCTGGTCCGGGTCAGTGAGAAAATCTGGGGTTACACCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS-3UTR CAA 90 bp TACCAGCCTATGACTCCCATTCATCCCAGATTCACCACATCGGGCATTCACTTCCGTTCCTCCAGGACTTaGGCAGCCTTGCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: YQPMTPIHPRFTTSGIHFRSSRT*AALRSS
Trigger: GGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAACG...GAAGTGAATGCCCGATGTGGTGAATCTGGGATGAATGGGAGTCATAGGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS TCA 90 bp GAATCTGCTCTTCTCCTCGCTTCCTCTCCTCTTCCTCTTTCCTCTTaGATTCCTCGTGGATGCGTTCCTCCAGGACTTTGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ESALLLASSPLPLSS*IPRGCVPPGLWQPC
Trigger: GCAAGGCTGCCAAAGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAGGAAAGAGGAAGAGGAGAGGAAGCGAGGAGAAGAGCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS GCA 90 bp CCGGACCAGGAATGCTCCCTCAGTCATGTTCTCCAGGAGAGCTTCTaGATCTTCTCGGCTAATAATTCCATGGAACCAGGGGGCGATGAA +
Preference number: 5 (lower is better)
Translates to: PDQECSLSHVLQESF*IFSANNSMEPGGDE
Trigger: TTCATCGCCCCCTGGTTCCATGGAATTATTAGCCGAGAAGATGCAGAAGCTCTCCTGGAGAACATGACTGAGGGAGCATTCCTGGTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS-3UTR CAA 90 bp GCTACTTCATTCAGAAGTGCAATCCCAGAGCAACAGGAGAGAGCAGGGCAAGGCAGCCATTGGATGTGCTaGTCACTCGCTGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: ATSFRSAIPEQQERAGQGSHWMC*SLAAAS
Trigger: AGATGCTGCAGCGAGTGACAAGCACATCCAATGGCT...GCCTTGCCCTGCTCTCTCCTGTTGCTCTGGGATTGCACTTCTGAATGAAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS-3UTR CAA 90 bp GGCGAGTGGCAAAAGAAGAGGTTAAATAAGGAAGGCAGGACGGTGTCAATCAGCCTCTTTCTCACTGGCTaGGCAATGCAGCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GEWQKKRLNKEGRTVSISLFLTG*AMQLSL
Trigger: CAGGCTCAGCTGCATTGCCAAGCCAGTGAGAAAGAG...GCTGATTGACACCGTCCTGCCTTCCTTATTTAACCTCTTCTTTTGCCACTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp GGCAAGCTACCATTGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGAGGAGAGCCCATGTCTaGGCATCACCTGGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GKLPLAYAHMTLINIGRKRRAHV*ASPGVL
Trigger: CAGAACCCCAGGTGATGCCAAGACATGGGCTCTCCT...CTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CAA 90 bp TCTGCAGCAATGGGAGATGGGGCATGTGGCAAGCTACCATTGGCTTATGCTCACTGTGGCAAGCTACCATaGGCTTATGCTCACATGACA +
Preference number: 5 (lower is better)
Translates to: SAAMGDGACGKLPLAYAHCGKLP*AYAHMT
Trigger: TGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACA...GTGAGCATAAGCCAATGGTAGCTTGCCACATGCCCCATCTCCCATTGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp CAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTATGAGCCATTGGATGTGCTaGTCACTCGCTGCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: QNSSSRRKKEEKAIYQPMSHWMC*SLAARL
Trigger: CAAGCGAGCAGCGAGTGACAAGCACATCCAATGGCT...CATAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CAA 90 bp GGCGAGTGGCAAAAGAAGAGGTTAAATAAGGAAGGCAGGACGGTGTCAATCAGCAGCTGCTGGGAGTTCTaGGAACAGAAGTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GEWQKKRLNKEGRTVSISSCWEF*EQKLPP
Trigger: TGGAGGCAACTTCTGTTCCAAGAACTCCCAGCAGCT...GCTGATTGACACCGTCCTGCCTTCCTTATTTAACCTCTTCTTTTGCCACTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CAA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTTCCTCATCAGCCGCCTaGGACCGGCGCAACTGTTCT +
Preference number: 5 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVSSSAA*DRRNCS
Trigger: AGAACAGTTGCGCCGGTCCAAGGCGGCTGATGAGGA...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp CTGATCCGGCCACCACTTGGTTTCATCATGACTGGTTGCTCGATCTTACAGGACGTGGGGCATAGATGTTaGATACAGCCATCGGGTAAA +
Preference number: 5 (lower is better)
Translates to: LIRPPLGFIMTGCSILQDVGHRC*IQPSGK
Trigger: TTTACCCGATGGCTGTATCAAACATCTATGCCCCAC...GTCCTGTAAGATCGAGCAACCAGTCATGATGAAACCAAGTGGTGGCCGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS GCA 90 bp AGTGATAATTTCCTCCTTATGGAAATCAACGAGATCCGTGAGCGTTaGATGGCGATTGGGGTCCACTCCCAGGAAGCTGTAAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: SDNFLLMEINEIRER*MAIGVHSQEAVKIP
Trigger: GGGGATTTTTACAGCTTCCTGGGAGTGGACCCCAATCGCCATGCAACGCTCACGGATCTCGTTGATTTCCATAAGGAGGAAATTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS-3UTR CAA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTATCCGGGCTTTCTCATaGGCCAGAGCATCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVIRAFS*ARASRN
Trigger: GTTCCGGGATGCTCTGGCCAATGAGAAAGCCCGGAT...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGCTCTTTCTCACTGGCTaGGCAATGCAGCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRLFLTG*AMQLSL
Trigger: CAGGCTCAGCTGCATTGCCAAGCCAGTGAGAAAGAG...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTAGGACTTTGGCAGCCTaGCGGTCTTCCATCTCCACT +
Preference number: 5 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVRTLAA*RSSIST
Trigger: AGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCCT...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp CGATCTTACAGGACTGTCTTCTACAAGACCATACAAACAGATGACTCTCAGAATCAGGGGGCGATGAACTaGGTGTTCCTCTCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RSYRTVFYKTIQTDDSQNQGAMN*VFLSKP
Trigger: TGGCTTCGAGAGGAACACCAAGTTCATCGCCCCCTG...ATTCTGAGAGTCATCTGTTTGTATGGTCTTGTAGAAGACAGTCCTGTAAGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp GGCAAGCTACCATTGGCTTATGCTCACATGACACTGATCAACATAGGGAGGAAGGTGGGGCATAGATGTTaGATACAGCCATCGGGTAAA +
Preference number: 5 (lower is better)
Translates to: GKLPLAYAHMTLINIGRKVGHRC*IQPSGK
Trigger: TTTACCCGATGGCTGTATCAAACATCTATGCCCCAC...CTTCCTCCCTATGTTGATCAGTGTCATGTGAGCATAAGCCAATGGTAGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp ATACAGCCATCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATATCCGGGCTTTCTCATaGGCCAGAGCATCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: IQPSGKVNRSLTFLESIHIRAFS*ARASRN
Trigger: GTTCCGGGATGCTCTGGCCAATGAGAAAGCCCGGAT...ATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGATGGCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp GTCTTCTTGACTGTAAAGACTGTAATCTTCTCTTCATCATATACTACCTCTGTGCGTTCCTCCAGGACTTaGGCAGCCTTGCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: VFLTVKTVIFSSSYTTSVRSSRT*AALRSS
Trigger: GGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAACG...CACAGAGGTAGTATATGATGAAGAGAAGATTACAGTCTTTACAGTCAAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCGGTGGTGGTAGAGTCTaGCCTCCTGCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSGGGRV*PPAHGS
Trigger: AGAGCCATGAGCAGGAGGCAAGACTCTACCACCACC...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCCAGGGGGCGATGAACTaGGTGTTCCTCTCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSQGAMN*VFLSKP
Trigger: TGGCTTCGAGAGGAACACCAAGTTCATCGCCCCCTG...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp TCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATTCTTTTCCTGCATCCCGGAACTTCTaGGTGATCTCTGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SGKVNRSLTFLESIHSFPASRNF*VISASF
Trigger: GAAGGAGGCAGAGATCACCAAGAAGTTCCGGGATGC...AGGAAAAGAATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp GTCTTCTTGACTGTAAAGACTGTAATCTTCTCTTCATCATATACTACCTCTGTGGCATCCCGGAACTTCTaGGTGATCTCTGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VFLTVKTVIFSSSYTTSVASRNF*VISASF
Trigger: GAAGGAGGCAGAGATCACCAAGAAGTTCCGGGATGC...CACAGAGGTAGTATATGATGAAGAGAAGATTACAGTCTTTACAGTCAAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp TCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATTCTTTTCCTAGGACTTTGGCAGCCTaGCGGTCTTCCATCTCCACT +
Preference number: 5 (lower is better)
Translates to: SGKVNRSLTFLESIHSFPRTLAA*RSSIST
Trigger: AGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCCT...AGGAAAAGAATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp CTCAGAATAGTTCCTCCAGGAGGAAGAAGGAGGAAAAAGCGATCTACCAGCCTAGGGCTAAGCACTAAGTaGTTATTGTTATTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LRIVPPGGRRRKKRSTSLGLSTK*LLLLWL
Trigger: CAACCACAATAACAATAACAACTTAGTGCTTAGCCC...TAGGCTGGTAGATCGCTTTTTCCTCCTTCTTCCTCCTGGAGGAACTATTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CAA 90 bp ATACAGCCATCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATTCTTCCTCTTTCCTCTaGAATTCCTCGTGGATGCGT +
Preference number: 5 (lower is better)
Translates to: IQPSGKVNRSLTFLESIHSSSFL*NSSWMR
Trigger: ACGCATCCACGAGGAATTCAAGAGGAAAGAGGAAGA...ATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGATGGCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp TATCCCTTGAGGCATATTAATCTACTTTTTCCTTTGGATAGTGGTGGATCTTCCTCTTCCTCTTTCCTCTaGAATTCCTCGTGGATGCGT +
Preference number: 5 (lower is better)
Translates to: YPLRHINLLFPLDSGGSSSSSFL*NSSWMR
Trigger: ACGCATCCACGAGGAATTCAAGAGGAAAGAGGAAGA...GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATTAATATGCCTCAAGGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp ACAAGACCATACAAACAGATGACTCTCAGAATAGTTCCTCCAGGAGGAAGAAGGAATCTACTTTTTCCTTaGGATAGTGGTGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: TRPYKQMTLRIVPPGGRRNLLFP*DSGGSS
Trigger: GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATT...CCTTCTTCCTCCTGGAGGAACTATTCTGAGAGTCATCTGTTTGTATGGTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp CCTCTCACCAAACACAATGCTGCAAGCATTATAATGCTAGTAAGTTCCAGGGTTAATCTACTTTTTCCTTaGGATAGTGGTGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: PLTKHNAASIIMLVSSRVNLLFP*DSGGSS
Trigger: GGAAGATCCACCACTATCCAAAGGAAAAAGTAGATT...AACCCTGGAACTTACTAGCATTATAATGCTTGCAGCATTGTGTTTGGTGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp ATACAGCCATCGGGTAAAGTAAATCGTTCCCTAACATTCCTAGAATCCATTCATAGAACCATTCTTGCATaGATAACTCACCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: IQPSGKVNRSLTFLESIHRTILA*ITHPRS
Trigger: AGACCTGGGGTGAGTTATCAATGCAAGAATGGTTCT...ATGAATGGATTCTAGGAATGTTAGGGAACGATTTACTTTACCCGATGGCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp ATCATCACATCATATCCCCTGATACATCATGGGCTAAGCACTAAGTTGTTATTGAGAACCATTCTTGCATaGATAACTCACCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: IITSYPLIHHGLSTKLLLRTILA*ITHPRS
Trigger: AGACCTGGGGTGAGTTATCAATGCAAGAATGGTTCT...CAATAACAACTTAGTGCTTAGCCCATGATGTATCAGGGGATATGATGTGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS-3UTR CAA 90 bp GAATTATTTTGGATTATTAAAACATGGTCCACGCACTGTAAGAGCTCGGTTTACTGTGGCAAGCTACCATaGGCTTATGCTCACATGACA +
Preference number: 5 (lower is better)
Translates to: ELFWIIKTWSTHCKSSVYCGKLP*AYAHMT
Trigger: TGTCATGTGAGCATAAGCCAATGGTAGCTTGCCACA...GTAAACCGAGCTCTTACAGTGCGTGGACCATGTTTTAATAATCCAAAATAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS-3UTR CAA 90 bp GAATTATTTTGGATTATTAAAACATGGTCCACGCACTGTAAGAGCTCGGTTTACCATGACAAACAGGCTTaGTCTTCTAAGGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: ELFWIIKTWSTHCKSSVYHDKQA*SSKVIA
Trigger: AGCTATGACCTTAGAAGACAAAGCCTGTTTGTCATG...GTAAACCGAGCTCTTACAGTGCGTGGACCATGTTTTAATAATCCAAAATAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000339284.6
CDS CCA 72 bp CGGAGCGAGTGGTGTCGGTACTCGTCCCGGGCGCGCTaGGCTCGGCGGCTCCTCTCCTCATCAGCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: RSEWCRYSSRAR*ARRLLSSSAAL
Trigger: CAAGGCGGCTGATGAGGAGAGGAGCCGCCGAGCCCAGCGCGCCCGGGACGAGTACCGACACCACTCGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp CCAGCGACCGTGCCCTTCTGGATAGCACGGAGCGAGTaGTGTCGGTACTCGTCCCGGGCGCGCTGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: PATVPFWIARSE*CRYSSRARWAR
Trigger: CCGAGCCCAGCGCGCCCGGGACGAGTACCGACACCACTCGCTCCGTGCTATCCAGAAGGGCACGGTCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp GAAGCAGGGCCAGGCAGAACGCCCGAGGGGCTGCTCTaGACTACGGACTGCTCAATCCGGGGCCACTCTCGG +
Preference number: 6 (lower is better)
Translates to: EAGPGRTPEGLL*TTDCSIRGHSR
Trigger: CCGAGAGTGGCCCCGGATTGAGCAGTCCGTAGTGCAGAGCAGCCCCTCGGGCGTTCTGCCTGGCCCTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 72 bp CGCTGGGCTCGGCGGCTCCTCTCCTCATCAGCCGCCTaGGACCGGCGCAACTGTTCTTCCCACTCTCGCTCC +
Preference number: 6 (lower is better)
Translates to: RWARRLLSSSAA*DRRNCSSHSRS
Trigger: GGAGCGAGAGTGGGAAGAACAGTTGCGCCGGTCCAAGGCGGCTGATGAGGAGAGGAGCCGCCGAGCCCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp CTCCTTAAACCAGCGGACGATGACATCTCTGGAGACTaGGCGCAGCGGGCGCTCCCAGGTCCTGCTGACCGG +
Preference number: 6 (lower is better)
Translates to: LLKPADDDISGD*AQRALPGPADR
Trigger: CCGGTCAGCAGGACCTGGGAGCGCCCGCTGCGCCCAGTCTCCAGAGATGTCATCGTCCGCTGGTTTAAGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313455.5
ENST00000646907.2
CDS CCA 72 bp CTCCTTAAACCAGCGGACGATGACATCTCTGGAGACTaGGCGCAGCGGGCGCTCCCAGGTCCTGACCGGCAG +
Preference number: 6 (lower is better)
Translates to: LLKPADDDISGD*AQRALPGPDRQ
Trigger: CTGCCGGTCAGGACCTGGGAGCGCCCGCTGCGCCCAGTCTCCAGAGATGTCATCGTCCGCTGGTTTAAGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339284.6
CDS CCA 72 bp CGGAACATGGAGCTGAGGCCAGCGACCGTGCCCTTCTaGATAGCACGGAGCGAGTGGTGTCGGTACTCGTCC +
Preference number: 6 (lower is better)
Translates to: RNMELRPATVPF*IARSEWCRYSS
Trigger: GGACGAGTACCGACACCACTCGCTCCGTGCTATCCAGAAGGGCACGGTCGCTGGCCTCAGCTCCATGTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp CATGTCGTGCAGGATCTGCTGCAGCATGATGCCACCTaGGATGCACGCACCAGAAGGGCAGCCAGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: HVVQDLLQHDAT*DARTRRAASRG
Trigger: TCCCCTGCTGGCTGCCCTTCTGGTGCGTGCATCCCAGGTGGCATCATGCTGCAGCAGATCCTGCACGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp CTCCTTAAACCAGCGGACGATGACATCTCTGGAGACTaGGCGCAGCGGGCGCTCCCAGGTCCTGAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: LLKPADDDISGD*AQRALPGPELS
Trigger: TGACAGCTCAGGACCTGGGAGCGCCCGCTGCGCCCAGTCTCCAGAGATGTCATCGTCCGCTGGTTTAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372150.7
CDS CAA 90 bp CAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTGGATGTGCTaGTCACTCGCTGCAGCATCTGGAGAGCCTCCTGAGTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: QTQTSPSAPRSHWMC*SLAAASGEPPESSG
Trigger: GCCAGAGGACTCAGGAGGCTCTCCAGATGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS TCA 72 bp CCAGGAGAGCCCATGTCTTGGCATCACCTGGGGTTCTaGGACAATGGGAAGGGCCCAAGCCTCCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PGEPMSWHHLGF*DNGKGPSLQLS
Trigger: GCTGAGCTGGAGGCTTGGGCCCTTCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACATGGGCTCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp ACGGCATCCCAGGAGAGCCCATGTCTTGGCATCACCTaGGGTTCTGAGACAATGGGAAGGGCCCAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TASQESPCLGIT*GSETMGRAQAS
Trigger: GGAGGCTTGGGCCCTTCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACATGGGCTCTCCTGGGATGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 90 bp ATCCGGGGCCACTCTCGGTGCCCCTTCTCTGTGCAGCATTGTCAGTaGGCCTCAGCTTGCAGCCAGCGACGAACTCATCTCCTCTACCCA +
Preference number: 6 (lower is better)
Translates to: IRGHSRCPFSVQHCQ*ASACSQRRTHLLYP
Trigger: TGGGTAGAGGAGATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGGGCACCGAGAGTGGCCCCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS TCA 72 bp TCTCTTCGTAGGGCTTGTCACCAGGGCCTTCTCCCATaGTCCAGACCCAGACCTCGCCATCTGCCCCTAGGA +
Preference number: 6 (lower is better)
Translates to: SLRRACHQGLLP*SRPRPRHLPLG
Trigger: TCCTAGGGGCAGATGGCGAGGTCTGGGTCTGGATCATGGGAGAAGGCCCTGGTGACAAGCCCTACGAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp CAGACCTCGCCATCTGCCCCTAGGAGCCATTGGATGTaGTTGTCACTCGCTGCAGCATCTGGAGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: QTSPSAPRSHWM*LSLAAASGEPP
Trigger: AGGAGGCTCTCCAGATGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS GCA 72 bp TGCACTACGGACTGCTCAATCCGGGGCCACTCTCGGTaGCCCTTCTCTGTGCAGCATTGTCAGTTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: CTTDCSIRGHSR*PFSVQHCQLAS
Trigger: TGAGGCCAACTGACAATGCTGCACAGAGAAGGGGCACCGAGAGTGGCCCCGGATTGAGCAGTCCGTAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp AGGAGCTCGGGGTCGATGTACATGTCGTGCAGGATCTaGTGCAGCATGATGCCACCTGGGATGCACGCACCA +
Preference number: 6 (lower is better)
Translates to: RSSGSMYMSCRI*CSMMPPGMHAP
Trigger: TGGTGCGTGCATCCCAGGTGGCATCATGCTGCAGCAGATCCTGCACGACATGTACATCGACCCCGAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp AGCTCGGCAAGGAGCTCGGGGTCGATGTACATGTCGTaGAGGATCTGCTGCAGCATGATGCCACCTGGGATG +
Preference number: 6 (lower is better)
Translates to: SSARSSGSMYMS*RICCSMMPPGM
Trigger: CATCCCAGGTGGCATCATGCTGCAGCAGATCCTGCACGACATGTACATCGACCCCGAGCTCCTTGCCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp CAGACCTCGCCATCTGCCCCTAGGAGCCATTGGATGTaGTTGTCACTCGCTGCTCGCTTGGTCTTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: QTSPSAPRSHWM*LSLAARLVFGG
Trigger: GCCTCCAAAGACCAAGCGAGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp TGGCAACATCAAGGGAAGGAAGAGAAGATTCCTCCGTaGAGCCCGTCCCCGCACAATTCCCGCCCTGGGACA +
Preference number: 6 (lower is better)
Translates to: WQHQGKEEKIPP*SPSPHNSRPGT
Trigger: TGTCCCAGGGCGGGAATTGTGCGGGGACGGGCTCCACGGAGGAATCTTCTCTTCCTTCCCTTGATGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS CCA 72 bp CAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTaGATGTGCTTGTCACTCGCTGCAGCATCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: QTQTSPSAPRSH*MCLSLAAASGE
Trigger: CTCTCCAGATGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS CAA 72 bp ACCTCGCCATCTGCCCCTAGGAGCCATTGGATGTGCTaGTCACTCGCTGCAGCATCTGGAGAGCCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: TSPSAPRSHWMC*SLAAASGEPPE
Trigger: CTCAGGAGGCTCTCCAGATGCTGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313455.5
CDS CAA 72 bp GGTCACCAAGCACGGCATCCCAGGAGAGCCCATGTCTaGGCATCACCTGGGGTTCTGAGACAATGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: GHQARHPRRAHV*ASPGVLRQWEG
Trigger: CCCTTCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACATGGGCTCTCCTGGGATGCCGTGCTTGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 72 bp ACCTCGCCATCTGCCCCTAGGAGCCATTGGATGTGCTaGTCACTCGCTGCTCGCTTGGTCTTTGGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: TSPSAPRSHWMC*SLAARLVFGGL
Trigger: CAGGCCTCCAAAGACCAAGCGAGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 90 bp CCGGCGCAACTGTTCTTCCCACTCTCGCTCCTCTTTCTCACTGGCTaGGCAATGCAGCTGAGCCTGCTTCAGGGTCCAGTAGAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: PAQLFFPLSLLFLTG*AMQLSLLQGPVELL
Trigger: AAGGAGCTCTACTGGACCCTGAAGCAGGCTCAGCTGCATTGCCAAGCCAGTGAGAAAGAGGAGCGAGAGTGGGAAGAACAGTTGCGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp AGCTCGGGGTCGATGTACATGTCGTGCAGGATCTGCTaGAGCATGATGCCACCTGGGATGCACGCACCAGAA +
Preference number: 6 (lower is better)
Translates to: SSGSMYMSCRIC*SMMPPGMHAPE
Trigger: TTCTGGTGCGTGCATCCCAGGTGGCATCATGCTGCAGCAGATCCTGCACGACATGTACATCGACCCCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp GCCCATGTCTTGGCATCACCTGGGGTTCTGAGACAATaGGAAGGGCCCAAGCCTCCAGCTCAGCCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: AHVLASPGVLRQ*EGPKPPAQPGN
Trigger: ATTTCCTGGCTGAGCTGGAGGCTTGGGCCCTTCCCATTGTCTCAGAACCCCAGGTGATGCCAAGACATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CCA 72 bp CAGACCCAGACCTCGCCATCTGCCCCTAGGAGCCATTaGATGTGCTTGTCACTCGCTGCTCGCTTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: QTQTSPSAPRSH*MCLSLAARLVF
Trigger: AAAGACCAAGCGAGCAGCGAGTGACAAGCACATCCAATGGCTCCTAGGGGCAGATGGCGAGGTCTGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 72 bp CCCCTTCTCTGTGCAGCATTGTCAGTTGGCCTCAGCTaGCAGCCAGCGACGAACTCATCTCCTCTACCCAGG +
Preference number: 6 (lower is better)
Translates to: PLLCAALSVGLS*QPATNSSPLPR
Trigger: CCTGGGTAGAGGAGATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 72 bp CACTCTCGGTGCCCCTTCTCTGTGCAGCATTGTCAGTaGGCCTCAGCTTGCAGCCAGCGACGAACTCATCTC +
Preference number: 6 (lower is better)
Translates to: HSRCPFSVQHCQ*ASACSQRRTHL
Trigger: GAGATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGGGCACCGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 72 bp CGGCTAATAATTCCATGGAACCAGGGGGCGATGAACTaGGTGTTCCTCTCGAAGCCAGCTCGGCGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: RLIIPWNQGAMN*VFLSKPARRGS
Trigger: GCTGCCTCGCCGAGCTGGCTTCGAGAGGAACACCAAGTTCATCGCCCCCTGGTTCCATGGAATTATTAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS CAA 90 bp GCCAAGATCCGGGCTTTCTCATTGGCCAGAGCATCCCGGAACTTCTaGGTGATCTCTGCCTCCTTCTGTCTCCAGAGCTCCTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: AKIRAFSLARASRNF*VISASFCLQSSSAS
Trigger: GGAAGCTGAGGAGCTCTGGAGACAGAAGGAGGCAGAGATCACCAAGAAGTTCCGGGATGCTCTGGCCAATGAGAAAGCCCGGATCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CAA 90 bp CTCTCGGTGCCCCTTCTCTGTGCAGCATTGTCAGTTGGCCTCAGCTaGCAGCCAGCGACGAACTCATCTCCTCTACCCAGGACAGCAAAA +
Preference number: 6 (lower is better)
Translates to: LSVPLLCAALSVGLS*QPATNSSPLPRTAK
Trigger: TTTTGCTGTCCTGGGTAGAGGAGATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGGGCACCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp CCCTTCTCTGTGCAGCATTGTCAGTTGGCCTCAGCTTaGAGCCAGCGACGAACTCATCTCCTCTACCCAGGA +
Preference number: 6 (lower is better)
Translates to: PFSVQHCQLASA*SQRRTHLLYPG
Trigger: TCCTGGGTAGAGGAGATGAGTTCGTCGCTGGCTGCAAGCTGAGGCCAACTGACAATGCTGCACAGAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS CAA 72 bp CGGGCTTTCTCATTGGCCAGAGCATCCCGGAACTTCTaGGTGATCTCTGCCTCCTTCTGTCTCCAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RAFSLARASRNF*VISASFCLQSS
Trigger: GGAGCTCTGGAGACAGAAGGAGGCAGAGATCACCAAGAAGTTCCGGGATGCTCTGGCCAATGAGAAAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CAA 90 bp CTCTTGAATTCCTCGTGGATGCGTTCCTCCAGGACTTTGGCAGCCTaGCGGTCTTCCATCTCCACTTTCCACTTCTCCGCCAAGATCCGG +
Preference number: 6 (lower is better)
Translates to: LLNSSWMRSSRTLAA*RSSISTFHFSAKIR
Trigger: CCGGATCTTGGCGGAGAAGTGGAAAGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS TCA 72 bp GGCGGTAGGAGAGGGTGTAACCCCAGATTTTCTCACTaGCCCGGACCAGGAATGCTCCCTCAGTCATGTTCT +
Preference number: 6 (lower is better)
Translates to: GGRRGCNPRFSH*PGPGMLPQSCS
Trigger: AGAACATGACTGAGGGAGCATTCCTGGTCCGGGTCAGTGAGAAAATCTGGGGTTACACCCTCTCCTACCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS CAA 90 bp TCCATCTCCACTTTCCACTTCTCCGCCAAGATCCGGGCTTTCTCATaGGCCAGAGCATCCCGGAACTTCTTGGTGATCTCTGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SISTFHFSAKIRAFS*ARASRNFLVISASF
Trigger: GAAGGAGGCAGAGATCACCAAGAAGTTCCGGGATGCTCTGGCCAATGAGAAAGCCCGGATCTTGGCGGAGAAGTGGAAAGTGGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CAA 90 bp TCCTCTTTCCTCTTGAATTCCTCGTGGATGCGTTCCTCCAGGACTTaGGCAGCCTTGCGGTCTTCCATCTCCACTTTCCACTTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: SSFLLNSSWMRSSRT*AALRSSISTFHFSA
Trigger: GGCGGAGAAGTGGAAAGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAGGAAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS TCA 72 bp AACAGTGATAATTTCCTCCATGGAACCAGGGGGCGATaGACTTGGTGTTCCTCTCGAAGCCAGCTCGGCGAG +
Preference number: 6 (lower is better)
Translates to: NSDNFLHGTRGR*TWCSSRSQLGE
Trigger: CTCGCCGAGCTGGCTTCGAGAGGAACACCAAGTTCATCGCCCCCTGGTTCCATGGAGGAAATTATCACTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000372150.7
CDS GCA 72 bp GTAACCCCAGATTTTCTCACTGACCCGGACCAGGAATaGTCCCTCAGTCATGTTCTCCAGGAGAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: VTPDFLTDPDQE*SLSHVLQESFC
Trigger: GCAGAAGCTCTCCTGGAGAACATGACTGAGGGAGCATTCCTGGTCCGGGTCAGTGAGAAAATCTGGGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS CAA 72 bp CTCTTGAATTCCTCGTGGATGCGTTCCTCCAGGACTTaGGCAGCCTTGCGGTCTTCCATCTCCACTTTCCAC +
Preference number: 6 (lower is better)
Translates to: LLNSSWMRSSRT*AALRSSISTFH
Trigger: GTGGAAAGTGGAGATGGAAGACCGCAAGGCTGCCAAAGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS CAA 90 bp CGAATCTGCTCTTCTCCTCGCTTCCTCTCCTCTTCCTCTTTCCTCTaGAATTCCTCGTGGATGCGTTCCTCCAGGACTTTGGCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: RICSSPRFLSSSSFL*NSSWMRSSRTLAAL
Trigger: CAAGGCTGCCAAAGTCCTGGAGGAACGCATCCACGAGGAATTCAAGAGGAAAGAGGAAGAGGAGAGGAAGCGAGGAGAAGAGCAGATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313455.5
ENST00000339284.6
ENST00000646907.2
CDS TCA 72 bp GCATTTTGTAGAAGAGGATGTGCTTCTGCACATCGCTaGGCTCGGCAAGGAGCTCGGGGTCGATGTACATGT +
Preference number: 6 (lower is better)
Translates to: AFCRRGCASAHR*ARQGARGRCTC
Trigger: ACATGTACATCGACCCCGAGCTCCTTGCCGAGCTCAGCGATGTGCAGAAGCACATCCTCTTCTACAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339284.6
ENST00000646907.2
CDS GCA 72 bp TTCCTCCTTATGGAAATCAACGAGATCCGTGAGCGTTaGATGGCGATTGGGGTCCACTCCCAGGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: FLLMEINEIRER*MAIGVHSQEAV
Trigger: TACAGCTTCCTGGGAGTGGACCCCAATCGCCATGCAACGCTCACGGATCTCGTTGATTTCCATAAGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646907.2
CDS GCA 72 bp GAATGCTCCCTCAGTCATGTTCTCCAGGAGAGCTTCTaGATCTTCTCGGCTAATAATTCCATGGAACCAGGG +
Preference number: 6 (lower is better)
Translates to: ECSLSHVLQESF*IFSANNSMEPG
Trigger: CCCTGGTTCCATGGAATTATTAGCCGAGAAGATGCAGAAGCTCTCCTGGAGAACATGACTGAGGGAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646907.2