Pregenerated sensors for SH2D1A (Homo sapiens)
Ensembl gene IDs: ENSG00000183918Ensembl transcript IDs: ENST00000360027.4, ENST00000371139.9, ENST00000477673.2, ENST00000491950.5, ENST00000494073.5, ENST00000635645.1, ENST00000647259.1
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGGCCACACTCCACTTTTGTACTCCCACGGCATCCATATTAAATaGTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SGHTPLLYSHGIHIK*SEIRSCQYMENSSV Trigger: GACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAAGTGGAGTGTGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371139.9 |
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| 3UTR TCA 90 bp | CCAGGTGTTTTTACTTCTATGCCCTCAGCGCCCTATTATGTTTGTTaGGTGAATGAATTCTGTGAGCCCTGTAGCAAAGTGACATATAAT | + |
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Preference number: 1 (lower is better) Translates to: PGVFTSMPSAPYYVC*VNEFCEPCSKVTYN Trigger: ATTATATGTCACTTTGCTACAGGGCTCACAGAATTCATTCACTCAACAAACATAATAGGGCGCTGAGGGCATAGAAGTAAAAACACCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR CCA 90 bp | AGAATTCCCAGTTATTATTTTACAGTGAAGCTTAGCCTTTTCATATaGCCCATGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RIPSYYFTVKLSLFI*PMDQSICTDLSICL Trigger: GAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCATGGGCCATATGAAAAGGCTAAGCTTCACTGTAAAATAATAACTGGGAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR CCA 90 bp | ACGGCATCCATATTAAATGCTCAGAAATCAGGTCTTGCCAGTACATaGAGAATAGCTCTGTCTCTCAGCAGTTCACTAATTAAAACCAAG | + |
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Preference number: 1 (lower is better) Translates to: TASILNAQKSGLAST*RIALSLSSSLIKTK Trigger: CTTGGTTTTAATTAGTGAACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATATGGATGCCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | GACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATGCCCTCAGCGCCCCCTATTATGTTTGTTaGGTGAATGAATTCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: DSELRAGTRCFYFYALSAPYYVC*VNEFCE Trigger: CTCACAGAATTCATTCACTCAACAAACATAATAGGG...GGCGCTGAGGGCATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCCTTTTCATATGGCCCATGGACCAGAGTATTTGCACTGACCTATCTATCGGTCTTGCCAGTACATaGAGAATAGCTCTGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLFIWPMDQSICTDLSIGLAST*RIALSL Trigger: GAGAGACAGAGCTATTCTCCATGTACTGGCAAGACC...GATAGATAGGTCAGTGCAAATACTCTGGTCCATGGGCCATATGAAAAGGCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | TATCTATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCAAATCAGTTACTCATaGGCTGCAGCTGCTGAAATT | + |
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Preference number: 2 (lower is better) Translates to: YLSASKDQIYLHTGNLAYQISYS*AAAAEI Trigger: AATTTCAGCAGCTGCAGCTCATGAGTAACTGATTTG...ATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR GCA 90 bp | AATGCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCATGGACCAGAGTATTTaGACTGACCTATCTATCTGC | + |
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Preference number: 2 (lower is better) Translates to: NAQKSGLASTWRIALSLSMDQSI*TDLSIC Trigger: GCAGATAGATAGGTCAGTGCAAATACTCTGGTCCAT...GCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR GCA 90 bp | TATCTATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATTCAGAAATCAGGTCTTaGCAGTACATGGAGAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: YLSASKDQIYLHTGNLAYSEIRS*QYMENS Trigger: GCTATTCTCCATGTACTGGCAAGACCTGATTTCTGA...ATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCAGTGGCATCCATATTAAATaGTCAGAAATCAGGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: AQKSGLASTWRIALSLSSGIHIK*SEIRSC Trigger: GCAAGACCTGATTTCTGAGCATTTAATATGGATGCC...ACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR CAA 90 bp | AATGGTAAACCACCCATAATGCATTACTCAGGCCACACTCCACTTTaGTACTCCCACGGCATCCATATTAAATGCTCAGAAATCAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NGKPPIMHYSGHTPL*YSHGIHIKCSEIRS Trigger: AGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAAGTGGAGTGTGGCCTGAGTAATGCATTATGGGTGGTTTACCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371139.9 |
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| 3UTR-3UTR TCA 90 bp | TGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTCTAAAGACCAGATCTACCAAATCAGTTACTCATaGGCTGCAGCTGCTGAAATT | + |
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Preference number: 2 (lower is better) Translates to: WTRVFALTYLSASKDQIYQISYS*AAAAEI Trigger: AATTTCAGCAGCTGCAGCTCATGAGTAACTGATTTG...GTAGATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | AAAACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTCGTCCAACAAGACAGTaGACTGAGAGCAGGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: KTKFTNTHTQSRIPSYYFRPTRQ*TESRDQ Trigger: CTGGTCCCTGCTCTCAGTTCACTGTCTTGTTGGACG...AAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTACTCCCACGGCATCCATATTAAATGCTCAGAAATCAGGTCTTGCCAGTTTGTGTACTTCTAGCTaGGGACTTCTTCTCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: FCTPTASILNAQKSGLASLCTSS*GLLLNW Trigger: CCAGTTGAGAAGAAGTCCTCAGCTAGAAGTACACAA...ACTGGCAAGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| 3UTR-3UTR GCA 90 bp | AAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCAGTTCACTAATGGACCAGAGTATTTaGACTGACCTATCTATCTGC | + |
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Preference number: 2 (lower is better) Translates to: KSGLASTWRIALSLSSSLMDQSI*TDLSIC Trigger: GCAGATAGATAGGTCAGTGCAAATACTCTGGTCCAT...TAGTGAACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR CCA 90 bp | TGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTCTAAAGACCAGATCTACCTCCAGGTTGGTCTGTaGATTTTACTGTCCAATATC | + |
|
Preference number: 2 (lower is better) Translates to: WTRVFALTYLSASKDQIYLQVGL*ILLSNI Trigger: GATATTGGACAGTAAAATCCACAGACCAACCTGGAG...GTAGATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR CCA 90 bp | AAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCAGTTCACTAGGACTTCTTCTCAACTaGATACTGCAGAGGTATTAC | + |
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Preference number: 2 (lower is better) Translates to: KSGLASTWRIALSLSSSLGLLLN*ILQRYY Trigger: GTAATACCTCTGCAGTATCCAGTTGAGAAGAAGTCC...TAGTGAACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | CTCGTCCAACAAGACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATAGCCCTGTAGCAAAGTaGCATATAATCAATCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LVQQDSELRAGTRCFYFYSPVAK*HIINHK Trigger: TTTGTGATTGATTATATGTCACTTTGCTACAGGGCT...ATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTCTTGTTGGACGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | TGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTCTAAAGACCAGATCTACCCCTATTATGTTTGTTaGGTGAATGAATTCTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: WTRVFALTYLSASKDQIYPYYVC*VNEFCE Trigger: CTCACAGAATTCATTCACTCAACAAACATAATAGGG...GTAGATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR GCA 90 bp | CCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAAGCAGAGGTATTACAATaGCTTGATCTGGCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PTELLFPNPRFKAPHYVQAEVLQ*LDLASE Trigger: TTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGC...TTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTACAAGTCCATTTCAGCTTTaGCGACATGCTAGATGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TKFTNTHTQSRIPSYYFTSPFQL*RHARCF Trigger: GAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACT...TGTAAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAAAATGCCGCATAAAATTCTGTATCTCGTGTAGGTTTCAATCACTTGGAAGTCCATTTCAGCTTTaGCGACATGCTAGATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RRKCRIKFCISCRFQSLGSPFQL*RHARCF Trigger: GAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACT...TCCAAGTGATTGAAACCTACACGAGATACAGAATTTTATGCGGCATTTTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTACACCAGAGTATTTGCACTaGCCTATCTATCTGCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: TKFTNTHTQSRIPSYYFTPEYLH*PIYLPL Trigger: TAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGG...TGTAAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTACATTTTCATATGGCCCATaGACCAGAGTATTTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TKFTNTHTQSRIPSYYFTFSYGP*TRVFAL Trigger: CAGTGCAAATACTCTGGTCCATGGGCCATATGAAAA...TGTAAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR GCA 90 bp | AAAACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTTTCTCAACTGGATACTaGAGAGGTATTACAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: KTKFTNTHTQSRIPSYYFFSTGY*RGITMP Trigger: AGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAA...AAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGTTTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| 3UTR-3UTR CCA 90 bp | AAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTCAATTTTATTTTTCTTCATaGGGCTTTCAGGCAGACATC | + |
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Preference number: 2 (lower is better) Translates to: KSFTLCLVLVLAHSIQLQFYFSS*GFQADI Trigger: GATGTCTGCCTGAAAGCCCCATGAAGAAAAATAAAA...TTGAAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| 3UTR TCA 72 bp | CCTTTTCATATGGCCCATGGACCAGAGTATTTGCACTaGCCTATCTATCTGCCTCTAAAGACCAGATCTACC | + |
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Preference number: 3 (lower is better) Translates to: PFHMAHGPEYLH*PIYLPLKTRST Trigger: GGTAGATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCATGGGCCATATGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR GCA 72 bp | CACGGCATCCATATTAAATGCTCAGAAATCAGGTCTTaGCAGTACATGGAGAATAGCTCTGTCTCTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HGIHIKCSEIRS*QYMENSSVSQQ Trigger: CTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATATGGATGCCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR TCA 72 bp | ATCGTTATTGTTTTCTCGTCCAACAAGACAGTGAACTaGGAGCAGGGACCAGGTGTTTTTACTTCTATGCCC | + |
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Preference number: 3 (lower is better) Translates to: IVIVFSSNKTVN*EQGPGVFTSMP Trigger: GGGCATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTCTTGTTGGACGAGAAAACAATAACGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR TCA 72 bp | TTTACTTCTATGCCCTCAGCGCCCTATTATGTTTGTTaGGTGAATGAATTCTGTGAGCCCTGTAGCAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: FTSMPSAPYYVC*VNEFCEPCSKV Trigger: CACTTTGCTACAGGGCTCACAGAATTCATTCACTCAACAAACATAATAGGGCGCTGAGGGCATAGAAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR GCA 72 bp | ACTCCACTTTTGTACTCCCACGGCATCCATATTAAATaGTCAGAAATCAGGTCTTGCCAGTACATGGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: TPLLYSHGIHIK*SEIRSCQYMEN Trigger: ATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAAGTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| 3UTR-3UTR CAA 90 bp | CCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAAAGGTATTACAATGCCTaGATCTGGCTTCTGAAATGC | + |
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Preference number: 3 (lower is better) Translates to: PTELLFPNPRFKAPHYVQRYYNA*IWLLKC Trigger: GCATTTCAGAAGCCAGATCAAGGCATTGTAATACCT...TTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| 3UTR CCA 72 bp | ATATTAAATGCTCAGAAATCAGGTCTTGCCAGTACATaGAGAATAGCTCTGTCTCTCAGCAGTTCACTAATT | + |
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Preference number: 3 (lower is better) Translates to: ILNAQKSGLAST*RIALSLSSSLI Trigger: AATTAGTGAACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | GCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCAGTGCGTCCATGGCCTGGTaGACTCTTGGGCAGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: AQKSGLASTWRIALSLSSASMAW*TLGQAE Trigger: CTCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGC...ACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTAGCGTCCATGGCCTGGTaGACTCTTGGGCAGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVASMAW*TLGQAE Trigger: CTCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGC...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | AGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGTACTTATCAACTTGCGTCCATGGCCTGGTaGACTCTTGGGCAGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RPDLPTHGEPRLSCTYQLASMAW*TLGQAE Trigger: CTCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGC...AAGTTGATAAGTACATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | CTCGTCCAACAAGACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATCAGCCACTGCGTCCATaGCCTGGTGGACTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVQQDSELRAGTRCFYFYQPLRP*PGGLLG Trigger: GCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTG...ATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTCTTGTTGGACGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | GACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATGCCCTCAGCGCCAACAAGACAGTGAACTaGGAGCAGGGACCAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: DSELRAGTRCFYFYALSANKTVN*EQGPGV Trigger: AACACCTGGTCCCTGCTCTCAGTTCACTGTCTTGTT...GGCGCTGAGGGCATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | CTCGTCCAACAAGACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATCAAGGGAGATGCCGCTaGTACTGCAGCCAGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: LVQQDSELRAGTRCFYFYQGRCR*YCSQAQ Trigger: TTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTG...ATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTCTTGTTGGACGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | TATTTTTCTTCATGGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTACTGCGTCCATGGCCTaGTGGACTCTTGGGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: YFSSWGFQADIRIFSYPCTASMA*WTLGQA Trigger: GGCCTGCCCAAGAGTCCACCAGGCCATGGACGCAGT...ACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCCATGAAGAAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | TATTTTTCTTCATGGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTCAGCCACTGCGTCCATaGCCTGGTGGACTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YFSSWGFQADIRIFSYPCQPLRP*PGGLLG Trigger: GCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTG...ACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCCATGAAGAAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTATGTAACCGTGATACCTaGCACGCTCTCGCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVCNRDT*HALAVP Trigger: AGGGACAGCGAGAGCGTGCCAGGTATCACGGTTACA...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477673.2 |
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| CDS-3UTR TCA 90 bp | GACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATGCCCTCAGCGCCAGTCCATTTCAGCTTTaGCGACATGCTAGATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DSELRAGTRCFYFYALSASPFQL*RHARCF Trigger: GAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACT...GGCGCTGAGGGCATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | CCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAACAGCCACTGCGTCCATaGCCTGGTGGACTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PTELLFPNPRFKAPHYVQQPLRP*PGGLLG Trigger: GCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTG...TTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | GATCTACCTACACACGGGGAACCTCGCTTATCATGTACTTATCAACTTTCATTGTGCCATCCAGCCCAGTaGCAAGCAGGAGCTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: DLPTHGEPRLSCTYQLSLCHPAQ*QAGASR Trigger: GCGAGAAGCTCCTGCTTGCCACTGGGCTGGATGGCA...CAATGAAAGTTGATAAGTACATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | TATTTTTCTTCATGGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTTGCCATCCAGCCCAGTaGCAAGCAGGAGCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSSWGFQADIRIFSYPCCHPAQ*QAGASR Trigger: GCGAGAAGCTCCTGCTTGCCACTGGGCTGGATGGCA...ACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCCATGAAGAAAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | TATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGAACAAGACAGTGAACTaGGAGCAGGGACCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLPLKTRSTYTRGTSLIMNKTVN*EQGPGV Trigger: AACACCTGGTCCCTGCTCTCAGTTCACTGTCTTGTT...CATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | CTCCACTTTTGTACTCCCACGGCATCCATATTAAATGCTCAGAAATCAGGTCTTCAAGGGAGATGCCGCTaGTACTGCAGCCAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTPTASILNAQKSGLQGRCR*YCSQAQ Trigger: TTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTG...AAGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAAGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCTTCATGGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTCGAGGAGGAGAACTGTaGAAGGGAGATGCCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFSSWGFQADIRIFSYPCRGGEL*KGDAAA Trigger: AGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCG...ACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCCATGAAGAAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTACTTCTAGCTGAGGACTTCCCCTCAGCAAATAGCTaGCATCCAGCCCAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGSSLIPVVPCVLLAEDFPSANS*HPAQWQ Trigger: TTGCCACTGGGCTGGATGGCAGCTATTTGCTGAGGG...GAAGTCCTCAGCTAGAAGTACACAAGGTACTACAGGGATAAGAGAAGATCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | GACAGTGAACTGAGAGCAGGGACCAGGTGTTTTTACTTCTATGCCCTCAGCGCCTTTTCATATGGCCCATaGACCAGAGTATTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DSELRAGTRCFYFYALSAFSYGP*TRVFAL Trigger: CAGTGCAAATACTCTGGTCCATGGGCCATATGAAAA...GGCGCTGAGGGCATAGAAGTAAAAACACCTGGTCCCTGCTCTCAGTTCACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | TCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTACTTCTAGCTGAGGACTTCCTGCTGATTTTGCCATaGTACACAGCCACTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSLIPVVPCVLLAEDFLLILP*YTATAS Trigger: GGACGCAGTGGCTGTGTATCATGGCAAAATCAGCAG...GAAGTCCTCAGCTAGAAGTACACAAGGTACTACAGGGATAAGAGAAGATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAGGGACACCAGCCAACTTCCCACCATACAATCAAGCAAGACATTTTCTGCTGATTTTGCCATaGTACACAGCCACTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQGTPANFPPYNQARHFLLILP*YTATAS Trigger: GGACGCAGTGGCTGTGTATCATGGCAAAATCAGCAG...AAAATGTCTTGCTTGATTGTATGGTGGGAAGTTGGCTGGTGTCCCTTGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | GATCTACCTACACACGGGGAACCTCGCTTATCATGTACTTATCAACTTTCATTGCGTCCAACAAGACAGTaGACTGAGAGCAGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPTHGEPRLSCTYQLSLRPTRQ*TESRDQ Trigger: CTGGTCCCTGCTCTCAGTTCACTGTCTTGTTGGACG...CAATGAAAGTTGATAAGTACATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAGGGACACCAGCCAACTTCCCACCATACAATCAAGCAAGACATTTTGGCATGCTACTGCCTTaGTTTTTCCTGCAGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRQGTPANFPPYNQARHFGMLLP*FFLQHG Trigger: GCCATGCTGCAGGAAAAATCAAGGCAGTAGCATGCC...AAAATGTCTTGCTTGATTGTATGGTGGGAAGTTGGCTGGTGTCCCTTGTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACACTAGGCAAGAAAGATGCCGCTGCTACTaGAGCCAGGCACAAGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPGWSVDFTVQYQNTRQERCRCY*SQAQVN Trigger: GTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCT...TTCTTGCCTAGTGTTCTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCTTCATGGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTATGATACACAGCCACTaGGTCCATGGCCTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YFSSWGFQADIRIFSYPCMIHSH*VHGLVD Trigger: GTCCACCAGGCCATGGACGCAGTGGCTGTGTATCAT...ACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCCATGAAGAAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | CTCCACTTTTGTACTCCCACGGCATCCATATTAAATGCTCAGAAATCAGGTCTTCACAAGTCAACCACCTaGCTCCCAGTTCAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTPTASILNAQKSGLHKSTT*LPVQPD Trigger: ATCTGGCTGAACTGGGAGTCAGGTGGTTGACTTGTG...AAGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAAGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | ATATTAAATGCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTACTGTGCAAGGGAGATaGCGCTGCTACTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNAQKSGLASTWRIALSTVQGR*RCYCSQ Trigger: CTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGT...AGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | CTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCTTCCATTACACGAGGAGGAGAACTGTaGAAGGGAGATGCCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCTKVHFSFDDMLDASITRGGEL*KGDAAA Trigger: AGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCG...TGTAATGGAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | CCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAAATGATACACAGCCACTaGGTCCATGGCCTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTELLFPNPRFKAPHYVQMIHSH*VHGLVD Trigger: GTCCACCAGGCCATGGACGCAGTGGCTGTGTATCAT...TTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTAATCTGGCTTCTGAAATaGTCAGCACTCCAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVIWLLK*SALQEP Trigger: AGGTTCTTGGAGTGCTGAGCATTTCAGAAGCCAGAT...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477673.2 |
||
| CDS-3UTR CCA 90 bp | CATAAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTACTGCGTCCATGGCCTaGTGGACTCTTGGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKSFTLCLVLVLAHSIQLTASMA*WTLGQA Trigger: GGCCTGCCCAAGAGTCCACCAGGCCATGGACGCAGT...AAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTACATGCCATCCAGCCCAGTaGCAAGCAGGAGCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TKFTNTHTQSRIPSYYFTCHPAQ*QAGASR Trigger: GCGAGAAGCTCCTGCTTGCCACTGGGCTGGATGGCA...TGTAAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGATTTTTCCTGCAGCATaGCAAACTCAGCACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPLKTRSTYTRGTSLIMIFPAA*QTQHSK Trigger: CTTGGAGTGCTGAGTTTGCCATGCTGCAGGAAAAAT...CATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | CCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAACTGCTGATTTTGCCATaGTACACAGCCACTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTELLFPNPRFKAPHYVQLLILP*YTATAS Trigger: GGACGCAGTGGCTGTGTATCATGGCAAAATCAGCAG...TTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | CCATGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTCTAAAGACCAGATCTTGTGTACTTCTAGCTaGGGACTTCTTCTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWTRVFALTYLSASKDQILCTSS*GLLLNW Trigger: CCAGTTGAGAAGAAGTCCTCAGCTAGAAGTACACAA...GATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | ATAAGATTTTCAACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACACTGTGCAAGGGAGATaGCGCTGCTACTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRFSTPGWSVDFTVQYQNTVQGR*RCYCSQ Trigger: CTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGT...GTTCTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGTTGAAAATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGTCAGAAATCAGGTCTTaGCAGTACATGGAGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLPLKTRSTYTRGTSLIMSEIRS*QYMENS Trigger: GCTATTCTCCATGTACTGGCAAGACCTGATTTCTGA...CATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | GAGAACTTGGCAAAGACAAGGGACACCAGCCAACTTCCCACCATACAATCAAGCGGCATCCATATTAAATaGTCAGAAATCAGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENLAKTRDTSQLPTIQSSGIHIK*SEIRSC Trigger: GCAAGACCTGATTTCTGAGCATTTAATATGGATGCC...GCTTGATTGTATGGTGGGAAGTTGGCTGGTGTCCCTTGTCTTTGCCAAGTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGAGGATGTTGTCTACTTaGCTTAAACCTCCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLPLKTRSTYTRGTSLIMRMLST*LKPPSH Trigger: GTGAGAAGGAGGTTTAAGGCAAGTAGACAACATCCT...CATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTAGGACTTCTTCTCAACTaGATACTGCAGAGGTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVGLLLN*ILQRYY Trigger: GTAATACCTCTGCAGTATCCAGTTGAGAAGAAGTCC...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGCTTAGCCTTTTCATATaGCCCATGGACCAGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YLPLKTRSTYTRGTSLIMLSLFI*PMDQSI Trigger: AATACTCTGGTCCATGGGCCATATGAAAAGGCTAAG...CATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTATACAATGCCTTGATCTaGCTTCTGAAATGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVYNALI*LLKCSA Trigger: TGCTGAGCATTTCAGAAGCCAGATCAAGGCATTGTA...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477673.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCAGTAGCAATTTAGTAGCTTaGTTCGATCGAGCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQKSGLASTWRIALSLSSSNLVA*FDRACQ Trigger: TTGGCAAGCTCGATCGAACCAAGCTACTAAATTGCT...ACTGCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| 3UTR CAA 72 bp | CCACCCATAATGCATTACTCAGGCCACACTCCACTTTaGTACTCCCACGGCATCCATATTAAATGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPIMHYSGHTPL*YSHGIHIKCSE Trigger: TTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAAGTGGAGTGTGGCCTGAGTAATGCATTATGGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371139.9 |
||
| CDS-3UTR TCA 90 bp | TGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTCTAAAGACCAGATCTACTTGTGTACTTCTAGCTaGGGACTTCTTCTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTRVFALTYLSASKDQIYLCTSS*GLLLNW Trigger: CCAGTTGAGAAGAAGTCCTCAGCTAGAAGTACACAA...GTAGATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | TCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTACTTCTAGCTGAGGACTTCTTGTGTACTTCTAGCTaGGGACTTCTTCTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSSLIPVVPCVLLAEDFLCTSS*GLLLNW Trigger: CCAGTTGAGAAGAAGTCCTCAGCTAGAAGTACACAA...GAAGTCCTCAGCTAGAAGTACACAAGGTACTACAGGGATAAGAGAAGATCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | ATAAGATTTTCAACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACCCCTCAGCAAATAGCTaGCATCCAGCCCAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRFSTPGWSVDFTVQYQNPSANS*HPAQWQ Trigger: TTGCCACTGGGCTGGATGGCAGCTATTTGCTGAGGG...GTTCTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGTTGAAAATCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTATTCTCAACTGGATACTaGAGAGGTATTACAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVFSTGY*RGITMP Trigger: AGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAA...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | CCATGGACCAGAGTATTTGCACTGACCTATCTATCTGCCTCTAAAGACCAGATCTATATGCACAGATGGTaGCATGCTACTGCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PWTRVFALTYLSASKDQIYMHRW*HATALI Trigger: AATCAAGGCAGTAGCATGCCACCATCTGTGCATATA...GATCTGGTCTTTAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGGTCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | TATCTGCCTCTAAAGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGAGCCCTGTAGCAAAGTaGCATATAATCAATCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLPLKTRSTYTRGTSLIMSPVAK*HIINHK Trigger: TTTGTGATTGATTATATGTCACTTTGCTACAGGGCT...CATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCTTTAGAGGCAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTACCCTATTATGTTTGTTaGGTGAATGAATTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVPYYVC*VNEFCE Trigger: CTCACAGAATTCATTCACTCAACAAACATAATAGGG...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | ATTATAAGATTTTCAACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGATGATACACAGCCACTaGGTCCATGGCCTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIRFSTPGWSVDFTVQYQMIHSH*VHGLVD Trigger: GTCCACCAGGCCATGGACGCAGTGGCTGTGTATCAT...CTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGTTGAAAATCTTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | AAAACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTCCCTCAGCAAATAGCTaGCATCCAGCCCAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTKFTNTHTQSRIPSYYFPSANS*HPAQWQ Trigger: TTGCCACTGGGCTGGATGGCAGCTATTTGCTGAGGG...AAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTACTTCTAGCTGAGGACTTCGCAGAGGTATTACAATaGCTTGATCTGGCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGSSLIPVVPCVLLAEDFAEVLQ*LDLASE Trigger: TTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGC...GAAGTCCTCAGCTAGAAGTACACAAGGTACTACAGGGATAAGAGAAGATCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | CTTAGCCTTTTCATATGGCCCATGGACCAGAGTATTTGCACTGACCTATCTATCATGGACCAGAGTATTTaGACTGACCTATCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLFIWPMDQSICTDLSIMDQSI*TDLSIC Trigger: GCAGATAGATAGGTCAGTGCAAATACTCTGGTCCAT...GATAGATAGGTCAGTGCAAATACTCTGGTCCATGGGCCATATGAAAAGGCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | AATGCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCTCAGCGGCATCCATATTAAATaGTCAGAAATCAGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NAQKSGLASTWRIALSLSGIHIK*SEIRSC Trigger: GCAAGACCTGATTTCTGAGCATTTAATATGGATGCC...GCTGAGAGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | CTTAGCCTTTTCATATGGCCCATGGACCAGAGTATTTGCACTGACCTATCTATCCTCCAGGTTGGTCTGTaGATTTTACTGTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLFIWPMDQSICTDLSILQVGL*ILLSNI Trigger: GATATTGGACAGTAAAATCCACAGACCAACCTGGAG...GATAGATAGGTCAGTGCAAATACTCTGGTCCATGGGCCATATGAAAAGGCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | AGACCAGATCTACCTACACACGGGGAACCTCGCTTATCATGTACTTATCAACTTCTCCAGGTTGGTCTGTaGATTTTACTGTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: RPDLPTHGEPRLSCTYQLLQVGL*ILLSNI Trigger: GATATTGGACAGTAAAATCCACAGACCAACCTGGAG...AAGTTGATAAGTACATGATAAGCGAGGTTCCCCGTGTGTAGGTAGATCTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | AAAACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTCGCCGGTTTCCCTGCTaGTTTTGCCATGATACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KTKFTNTHTQSRIPSYYFRRFPC*FCHDTQ Trigger: CTGTGTATCATGGCAAAATCAGCAGGGAAACCGGCG...AAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | ATAACCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTTTTATGTACCCCAGGTaGTGTCTCAGCACTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITYGITFSQSSFQSSSLCFMYPR*CLSTPR Trigger: TCTTGGAGTGCTGAGACAGCACCTGGGGTACATAAA...ACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371139.9 |
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| CDS-3UTR GCA 90 bp | TCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCTTCCATTGCACAGATGGTGGCATaGTACTGCCTTGATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCTKVHFSFDDMLDASIAQMVA*YCLDFS Trigger: GGAAAAATCAAGGCAGTAGCATGCCACCATCTGTGC...AATGGAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTCCTCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATCAAATCAGTTACTCATaGGCTGCAGCTGCTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSLCTKVHFSFDDMLDQISYS*AAAAEI Trigger: AATTTCAGCAGCTGCAGCTCATGAGTAACTGATTTG...ATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGAGGAGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | TCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTACTTCTAGCTGAGGACTTCAGCCCTGTAGCAAAGTaGCATATAATCAATCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGSSLIPVVPCVLLAEDFSPVAK*HIINHK Trigger: TTTGTGATTGATTATATGTCACTTTGCTACAGGGCT...GAAGTCCTCAGCTAGAAGTACACAAGGTACTACAGGGATAAGAGAAGATCCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | TCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCTTCCATTCCAGAGTATTTGCACTaGCCTATCTATCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLCTKVHFSFDDMLDASIPEYLH*PIYLPL Trigger: TAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGG...AATGGAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | CAAAGCTCCTCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCAGAGGTATTACAATaGCTTGATCTGGCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSLCTKVHFSFDDMLDAEVLQ*LDLASE Trigger: TTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGC...ATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGAGGAGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | GATGCTTTTACCTCAAGAAATGGTAAACCACCCATAATGCATTACTCAGGCCACTTCTCAACTGGATACTaGAGAGGTATTACAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DAFTSRNGKPPIMHYSGHFSTGY*RGITMP Trigger: AGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAA...GTGGCCTGAGTAATGCATTATGGGTGGTTTACCATTTCTTGAGGTAAAAGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371139.9 |
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| CDS-3UTR GCA 90 bp | AAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTCAATGGTTCGATCGAGCTTaGCAAGGGCTTCCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFTLCLVLVLAHSIQLQWFDRA*QGLPSS Trigger: AGAAGATGGAAGCCCTTGGCAAGCTCGATCGAACCA...TTGAAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR GCA 90 bp | TCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCTTCCATTTGCCTTGATTTTTCCTaGAGCATGGCAAACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCTKVHFSFDDMLDASICLDFS*SMANSA Trigger: TGCTGAGTTTGCCATGCTGCAGGAAAAATCAAGGCA...AATGGAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | CCTACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAAGGACTTCTTCTCAACTaGATACTGCAGAGGTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PTELLFPNPRFKAPHYVQGLLLN*ILQRYY Trigger: GTAATACCTCTGCAGTATCCAGTTGAGAAGAAGTCC...TTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR CCA 90 bp | GGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACACTAGGCAAGAAGGTTGCTTTTATTTTTCTTCATaGGGCTTTCAGGCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: GWSVDFTVQYQNTRQEGCFYFSS*GFQADI Trigger: GATGTCTGCCTGAAAGCCCCATGAAGAAAAATAAAA...GCAACCTTCTTGCCTAGTGTTCTGATATTGGACAGTAAAATCCACAGACCAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | ATAAGATTTTCAACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACAGTCCATTTCAGCTTTaGCGACATGCTAGATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRFSTPGWSVDFTVQYQNSPFQL*RHARCF Trigger: GAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACT...GTTCTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGTTGAAAATCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTCCCACGGCATCCATATTAAATGCTCAGAAATCAGGTCTTGCCAGTAATTTCCCTTCAAAATaGGGTCTTCCATGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCTPTASILNAQKSGLASNFPSK*GLPCSR Trigger: TCTACTACATGGAAGACCTCATTTTGAAGGGAAATT...ACTGGCAAGACCTGATTTCTGAGCATTTAATATGGATGCCGTGGGAGTACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | ATATTAAATGCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTGGACTTCTTCTCAACTaGATACTGCAGAGGTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNAQKSGLASTWRIALSGLLLN*ILQRYY Trigger: GTAATACCTCTGCAGTATCCAGTTGAGAAGAAGTCC...AGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | TATTTTTCTTCATGGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTTTTTATTTTTCTTCATaGGGCTTTCAGGCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: YFSSWGFQADIRIFSYPCFYFSS*GFQADI Trigger: GATGTCTGCCTGAAAGCCCCATGAAGAAAAATAAAA...ACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCCATGAAGAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | CATAAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTGGTCTTGCCAGTACATaGAGAATAGCTCTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKSFTLCLVLVLAHSIQLGLAST*RIALSL Trigger: GAGAGACAGAGCTATTCTCCATGTACTGGCAAGACC...AAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | AAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTCAAGGTCTTGCCAGTACATaGAGAATAGCTCTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFTLCLVLVLAHSIQLQGLAST*RIALSL Trigger: GAGAGACAGAGCTATTCTCCATGTACTGGCAAGACC...TTGAAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | AAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTCAACCAGAGTATTTGCACTaGCCTATCTATCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KSFTLCLVLVLAHSIQLQPEYLH*PIYLPL Trigger: TAGAGGCAGATAGATAGGTCAGTGCAAATACTCTGG...TTGAAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | ATATTAAATGCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTTTCTCAACTGGATACTaGAGAGGTATTACAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILNAQKSGLASTWRIALSFSTGY*RGITMP Trigger: AGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAA...AGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | TACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAAAATTTTCATATGGCCCATaGACCAGAGTATTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: YGITFSQSSFQSSSLCTKFSYGP*TRVFAL Trigger: CAGTGCAAATACTCTGGTCCATGGGCCATATGAAAA...TTTTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | ATAAGATTTTCAACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACCTTAGCCTTTTCATATaGCCCATGGACCAGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: IRFSTPGWSVDFTVQYQNLSLFI*PMDQSI Trigger: AATACTCTGGTCCATGGGCCATATGAAAAGGCTAAG...GTTCTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGTTGAAAATCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | TCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCTTCCATTCCCTATTATGTTTGTTaGGTGAATGAATTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTKVHFSFDDMLDASIPYYVC*VNEFCE Trigger: CTCACAGAATTCATTCACTCAACAAACATAATAGGG...AATGGAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | AAAACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTGCAGAGGTATTACAATaGCTTGATCTGGCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTKFTNTHTQSRIPSYYFAEVLQ*LDLASE Trigger: TTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGC...AAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | AAAACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTATGGACCAGAGTATTTaGACTGACCTATCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTKFTNTHTQSRIPSYYFMDQSI*TDLSIC Trigger: GCAGATAGATAGGTCAGTGCAAATACTCTGGTCCAT...AAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR GCA 90 bp | AAATCCTTCACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTCAATCAGAAATCAGGTCTTaGCAGTACATGGAGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFTLCLVLVLAHSIQLQSEIRS*QYMENS Trigger: GCTATTCTCCATGTACTGGCAAGACCTGATTTCTGA...TTGAAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTGAAGGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CCA 90 bp | ACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTACATTTTCAACTCCAGGTTaGTCTGTGGATTTTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKFTNTHTQSRIPSYYFTFSTPG*SVDFTV Trigger: GACAGTAAAATCCACAGACCAACCTGGAGTTGAAAA...TGTAAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR TCA 90 bp | TACGGAATTACTTTTTCCCAATCCTCGTTTCAAAGCTCCTCACTATGTACAAAAAATTTCCCTTCAAAATaGGGTCTTCCATGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YGITFSQSSFQSSSLCTKNFPSK*GLPCSR Trigger: TCTACTACATGGAAGACCTCATTTTGAAGGGAAATT...TTTTGTACATAGTGAGGAGCTTTGAAACGAGGATTGGGAAAAAGTAATTCCGTA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS GCA 90 bp | GGCAGTACACGCCTGGCACGCTCTCGCTGTCCCTCAGCAAATAGCTaGCATCCAGCCCAGTGGCAAGCAGGAGCTTCTCGCCGGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSTRLARSRCPSANS*HPAQWQAGASRRFP Trigger: GGGAAACCGGCGAGAAGCTCCTGCTTGCCACTGGGCTGGATGGCAGCTATTTGCTGAGGGACAGCGAGAGCGTGCCAGGCGTGTACTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000491950.5 ENST00000494073.5 ENST00000647259.1 |
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| CDS GCA 90 bp | GGTGGACTCTTGGGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGATaGCGCTGCTACTGCAGCCAGGCACAAGTCAACCACCTGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGLLGRPRRRTVQGR*RCYCSQAQVNHLTP Trigger: GGGAGTCAGGTGGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAAGAGTCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS GCA 90 bp | GTCCATGGCCTGGTGGACTCTTGGGCAGGCCGAGGAGGAGAACTGTaGAAGGGAGATGCCGCTGCTACTGCAGCCAGGCACAAGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VHGLVDSWAGRGGEL*KGDAAATAARHKST Trigger: GGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAAGAGTCCACCAGGCCATGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS GCA 90 bp | GGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGATGCCGCTGCTACTaGAGCCAGGCACAAGTCAACCACCTGACTCCCAGTTCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRPRRRTVQGRCRCY*SQAQVNHLTPSSAR Trigger: TCTGGCTGAACTGGGAGTCAGGTGGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS GCA 90 bp | CTCTTGGGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGATGCCGCTaGTACTGCAGCCAGGCACAAGTCAACCACCTGACTCCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGRPRRRTVQGRCR*YCSQAQVNHLTPSS Trigger: TGAACTGGGAGTCAGGTGGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS CCA 90 bp | TTTGCCATGATACACAGCCACTGCGTCCATGGCCTGGTGGACTCTTaGGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGATGCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FAMIHSHCVHGLVDS*AGRGGELCKGDAAA Trigger: AGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTGTGTATCATGGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000647259.1 |
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| CDS TCA 90 bp | CATCCAGCCCAGTGGCAAGCAGGAGCTTCTCGCCGGTTTCCCTGCTaGTTTTGCCATGATACACAGCCACTGCGTCCATGGCCTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPAQWQAGASRRFPC*FCHDTQPLRPWPGG Trigger: TCCACCAGGCCATGGACGCAGTGGCTGTGTATCATGGCAAAATCAGCAGGGAAACCGGCGAGAAGCTCCTGCTTGCCACTGGGCTGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000477673.2 ENST00000491950.5 ENST00000494073.5 ENST00000647259.1 |
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| CDS TCA 90 bp | GCTGATCCGTCAGAATGCGGTGTCGTTTCAGGCACACCATGGTCCTaGAAGGATGGTTTCATCTCCATGAACATCATCAATCAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ADPSECGVVSGTPWS*KDGFISMNIINQQG Trigger: GCCTTGCTGATTGATGATGTTCATGGAGATGAAACCATCCTTTCAGGACCATGGTGTGCCTGAAACGACACCGCATTCTGACGGATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635645.1 |
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| CDS CCA 90 bp | GTCAGAATGCGGTGTCGTTTCAGGCACACCATGGTCCTGAAAGGATaGTTTCATCTCCATGAACATCATCAATCAGCAAGGCATGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRMRCRFRHTMVLKG*FHLHEHHQSARHAG Trigger: TCCAGCATGCCTTGCTGATTGATGATGTTCATGGAGATGAAACCATCCTTTCAGGACCATGGTGTGCCTGAAACGACACCGCATTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635645.1 |
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| CDS-3UTR CAA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTATGGCATGCTACTGCCTaGATTTTTCCTGCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVWHATA*IFPAAW Trigger: CCATGCTGCAGGAAAAATCAAGGCAGTAGCATGCCA...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS TCA 90 bp | ATCTATATCAGGAAGTTAGAAGACAGCACACTGCAGAACATTCCTTaGTTCCTGTGTCCACACTCCCTGTTCTGGACCTTGGTCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYIRKLEDSTLQNIP*FLCPHSLFWTLVSG Trigger: CCCACTGACCAAGGTCCAGAACAGGGAGTGTGGACACAGGAATCAAGGAATGTTCTGCAGTGTGCTGTCTTCTAACTTCCTGATATAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635645.1 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAACACTAGGCAAGAAGGCCACACTCCACTTTaGTACTCCCACGGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TPGWSVDFTVQYQNTRQEGHTPL*YSHGIH Trigger: ATGGATGCCGTGGGAGTACAAAAGTGGAGTGTGGCC...TTCTTGCCTAGTGTTCTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371139.9 |
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| CDS TCA 90 bp | TCGTTTCAGGCACACCATGGTCCTGAAAGGATGGTTTCATCTCCATaGACATCATCAATCAGCAAGGCATGCTGGACATCTATATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFQAHHGPERMVSSP*TSSISKACWTSISG Trigger: TCCTGATATAGATGTCCAGCATGCCTTGCTGATTGATGATGTTCATGGAGATGAAACCATCCTTTCAGGACCATGGTGTGCCTGAAACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635645.1 |
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| CDS-3UTR CAA 90 bp | GGGGCTTTCAGGCAGACATCAGGATCTTCTCTTATCCCTGTAGTACCTTGTGTAAGGTATTACAATGCCTaGATCTGGCTTCTGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GAFRQTSGSSLIPVVPCVRYYNA*IWLLKC Trigger: GCATTTCAGAAGCCAGATCAAGGCATTGTAATACCT...TACACAAGGTACTACAGGGATAAGAGAAGATCCTGATGTCTGCCTGAAAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477673.2 ENST00000647259.1 |
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| CDS-3UTR CAA 90 bp | CACTCTTTGTTTAGTGCTTGTTTTAGCACACAGTATACAGCTTCAAAAATCCCATTGGTTCGATCGAGCTaGCCAAGGGCTTCCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSLFSACFSTQYTASKIPLVRSS*PRASIF Trigger: GAAGATGGAAGCCCTTGGCAAGCTCGATCGAACCAA...TGGGATTTTTGAAGCTGTATACTGTGTGCTAAAACAAGCACTAAACAAAGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647259.1 |
||
| CDS-3UTR CAA 90 bp | ATATTAAATGCTCAGAAATCAGGTCTTGCCAGTACATGGAGAATAGCTCTGTCTCAGCAATTTAGTAGCTaGGTTCGATCGAGCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILNAQKSGLASTWRIALSQQFSS*VRSSLP Trigger: TGGCAAGCTCGATCGAACCAAGCTACTAAATTGCTG...AGACAGAGCTATTCTCCATGTACTGGCAAGACCTGATTTCTGAGCATTTAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS-3UTR CAA 90 bp | TCACTATGTACAAAAGTCCATTTCAGCTTTGACGACATGCTAGATGCTTCCATTAGGTATTACAATGCCTaGATCTGGCTTCTGAAATGC | + |
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Preference number: 5 (lower is better) Translates to: SLCTKVHFSFDDMLDASIRYYNA*IWLLKC Trigger: GCATTTCAGAAGCCAGATCAAGGCATTGTAATACCT...AATGGAAGCATCTAGCATGTCGTCAAAGCTGAAATGGACTTTTGTACATAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS-3UTR CAA 90 bp | ACCAAGTTCACCAACACCCATACACAATCCAGAATTCCCAGTTATTATTTTACACCCAACAACAGGATGTaGTCTACTTGCCTTAAACCT | + |
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Preference number: 5 (lower is better) Translates to: TKFTNTHTQSRIPSYYFTPNNRM*STCLKP Trigger: AGGTTTAAGGCAAGTAGACAACATCCTGTTGTTGGG...TGTAAAATAATAACTGGGAATTCTGGATTGTGTATGGGTGTTGGTGAACTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS-3UTR CAA 90 bp | ATTATAAGATTTTCAACTCCAGGTTGGTCTGTGGATTTTACTGTCCAATATCAGAGGTATTACAATGCCTaGATCTGGCTTCTGAAATGC | + |
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Preference number: 5 (lower is better) Translates to: IIRFSTPGWSVDFTVQYQRYYNA*IWLLKC Trigger: GCATTTCAGAAGCCAGATCAAGGCATTGTAATACCT...CTGATATTGGACAGTAAAATCCACAGACCAACCTGGAGTTGAAAATCTTATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371139.9 ENST00000647259.1 |
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| CDS GCA 72 bp | CGCCTGGCACGCTCTCGCTGTCCCTCAGCAAATAGCTaGCATCCAGCCCAGTGGCAAGCAGGAGCTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RLARSRCPSANS*HPAQWQAGASR Trigger: GCGAGAAGCTCCTGCTTGCCACTGGGCTGGATGGCAGCTATTTGCTGAGGGACAGCGAGAGCGTGCCAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000491950.5 ENST00000494073.5 ENST00000647259.1 |
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| CDS GCA 72 bp | TTGGGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGATaGCGCTGCTACTGCAGCCAGGCACAAGTCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LGRPRRRTVQGR*RCYCSQAQVNH Trigger: GTGGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS GCA 72 bp | TACCTGGCACGCTCTCGCTGTCCCTCAGCAAATAGCTaGCATCCAGCCCAGTGGCAAGCAGGAGCTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: YLARSRCPSANS*HPAQWQAGASR Trigger: GCGAGAAGCTCCTGCTTGCCACTGGGCTGGATGGCAGCTATTTGCTGAGGGACAGCGAGAGCGTGCCAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477673.2 |
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| CDS CAA 72 bp | GATACACAGCCACTGCGTCCATGGCCTGGTGGACTCTaGGGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DTQPLRPWPGGL*GRPRRRTVQGR Trigger: TCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTGTGTATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000477673.2 ENST00000491950.5 ENST00000494073.5 ENST00000647259.1 |
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| CDS CAA 90 bp | TTTTGCCATGATACACAGCCACTGCGTCCATGGCCTGGTGGACTCTaGGGCAGGCCGAGGAGGAGAACTGTGCAAGGGAGATGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FCHDTQPLRPWPGGL*GRPRRRTVQGRCRC Trigger: GCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTGTGTATCATGGCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000647259.1 |
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| CDS GCA 72 bp | AGGCCGAGGAGGAGAACTGTGCAAGGGAGATGCCGCTaGTACTGCAGCCAGGCACAAGTCAACCACCTGACT | + |
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Preference number: 6 (lower is better) Translates to: RPRRRTVQGRCR*YCSQAQVNHLT Trigger: AGTCAGGTGGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCTCGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS GCA 72 bp | AGGAGGAGAACTGTGCAAGGGAGATGCCGCTGCTACTaGAGCCAGGCACAAGTCAACCACCTGACTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RRRTVQGRCRCY*SQAQVNHLTPS Trigger: ACTGGGAGTCAGGTGGTTGACTTGTGCCTGGCTGCAGTAGCAGCGGCATCTCCCTTGCACAGTTCTCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360027.4 ENST00000647259.1 |
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| CDS GCA 72 bp | GGTTTCCCTGCTGATTTTGCCATGATACACAGCCACTaGGTCCATGGCCTGGTGGACTCTTGGGCAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GFPADFAMIHSH*VHGLVDSWAGR Trigger: TCGGCCTGCCCAAGAGTCCACCAGGCCATGGACGCAGTGGCTGTGTATCATGGCAAAATCAGCAGGGAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000477673.2 ENST00000491950.5 ENST00000494073.5 ENST00000647259.1 |
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| CDS TCA 72 bp | CAGTGGCAAGCAGGAGCTTCTCGCCGGTTTCCCTGCTaGTTTTGCCATGATACACAGCCACTGCGTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: QWQAGASRRFPC*FCHDTQPLRPW Trigger: CCATGGACGCAGTGGCTGTGTATCATGGCAAAATCAGCAGGGAAACCGGCGAGAAGCTCCTGCTTGCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000360027.4 ENST00000371139.9 ENST00000477673.2 ENST00000491950.5 ENST00000494073.5 ENST00000647259.1 |
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| CDS CCA 72 bp | CTGTCTTCAGTTCCTGAACTAGTTGAGTCAGATTTCTaGTCTGGGTGGCGCCAGCTGATCCGTCAGAATGCG | + |
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Preference number: 6 (lower is better) Translates to: LSSVPELVESDF*SGWRQLIRQNA Trigger: CGCATTCTGACGGATCAGCTGGCGCCACCCAGACCAGAAATCTGACTCAACTAGTTCAGGAACTGAAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635645.1 |
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| CDS GCA 72 bp | GCACAGATGGTGGCATGCTACTGCCTTGATTTTTCCTaGAGCATGGCAAACTCAGCACTCCAAGAACCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AQMVACYCLDFS*SMANSALQEPV Trigger: AACAGGTTCTTGGAGTGCTGAGTTTGCCATGCTGCAGGAAAAATCAAGGCAGTAGCATGCCACCATCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS TCA 72 bp | CATAATATATGCACAGATGGTGGCATGCTACTGCCTTaGTTTTTCCTGCAGCATGGCAAACTCAGCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: HNICTDGGMLLP*FFLQHGKLSTP Trigger: TGGAGTGCTGAGTTTGCCATGCTGCAGGAAAAATCAAGGCAGTAGCATGCCACCATCTGTGCATATATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS CAA 72 bp | ACACTTCAGTTAAAACGAGCTCAGCAATTTAGTAGCTaGGTTCGATCGAGCTTGCCAAGGGCTTCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLQLKRAQQFSS*VRSSLPRASIF Trigger: GAAGATGGAAGCCCTTGGCAAGCTCGATCGAACCAAGCTACTAAATTGCTGAGCTCGTTTTAACTGAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS GCA 72 bp | ACTTCTTCTCAACTGGATACTGCAGAGGTATTACAATaGCTTGATCTGGCTTCTGAAATGCTCAGCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: TSSQLDTAEVLQ*LDLASEMLSTP Trigger: TGGAGTGCTGAGCATTTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477673.2 |
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| CDS GCA 72 bp | TCTAGCATAATATATGCACAGATGGTGGCATGCTACTaGCTTGATTTTTCCTGCAGCATGGCAAACTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSIIYAQMVACY*LDFSCSMANSA Trigger: TGCTGAGTTTGCCATGCTGCAGGAAAAATCAAGGCAGTAGCATGCCACCATCTGTGCATATATTATGCTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647259.1 |
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| CDS CAA 72 bp | CTTCTCAACTGGATACTGCAGAGGTATTACAATGCCTaGATCTGGCTTCTGAAATGCTCAGCACTCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLNWILQRYYNA*IWLLKCSALQE Trigger: TTCTTGGAGTGCTGAGCATTTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477673.2 |
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| CDS TCA 72 bp | ATCAGGATCTTCTCTTATCCCTTGTGTACTTCTAGCTaGGGACTTCTTCTCAACTGGATACTGCAGAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: IRIFSYPLCTSS*GLLLNWILQRY Trigger: ATACCTCTGCAGTATCCAGTTGAGAAGAAGTCCTCAGCTAGAAGTACACAAGGGATAAGAGAAGATCCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360027.4 |
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| CDS GCA 72 bp | ACTTCTTCTCAACTGGATACTGCAGAGGTATTACAATaGCTTGATCTGGCTTCTGAAATGAGCACACATAGG | + |
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Preference number: 6 (lower is better) Translates to: TSSQLDTAEVLQ*LDLASEMSTHR Trigger: CCTATGTGTGCTCATTTCAGAAGCCAGATCAAGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAAGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494073.5 |
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