RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH2B3 (Homo sapiens)

Ensembl gene IDs: ENSG00000111252

Ensembl transcript IDs: ENST00000341259.7, ENST00000538307.1, ENST00000550925.2

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTAGAAGCCACTGCTGTGAGCCTGGGGGTTGTACTGAATGGCTCTaGTGGCACCCAAGAGCAGCTGACTCCACTGTCACTGCCCCCGTT +
Preference number: 1 (lower is better)
Translates to: PRSHCCEPGGCTEWL*WHPRAADSTVTAPV
Trigger: AACGGGGGCAGTGACAGTGGAGTCAGCTGCTCTTGGGTGCCAGCAGAGCCATTCAGTACAACCCCCAGGCTCACAGCAGTGGCTTCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 90 bp AGAAGCCACTGCTGTGAGCCTGGGGGTTGTACTGAATGGCTCTGCTaGCACCCAAGAGCAGCTGACTCCACTGTCACTGCCCCCGTTTCT +
Preference number: 1 (lower is better)
Translates to: RSHCCEPGGCTEWLC*HPRAADSTVTAPVS
Trigger: AGAAACGGGGGCAGTGACAGTGGAGTCAGCTGCTCTTGGGTGCCAGCAGAGCCATTCAGTACAACCCCCAGGCTCACAGCAGTGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 90 bp ATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGCCATGTaGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: IRCGHLWCGHSRPAM*TDGRWENRLLVFWA
Trigger: AGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR GCA 90 bp TGTATCTGTAAAGCTGATCTAAACTCCCAGTTTCCTAGAAGCCACTaGTGTGAGCCTGGGGGTTGTACTGAATGGCTCTGCTGGCACCCA +
Preference number: 1 (lower is better)
Translates to: CICKADLNSQFPRSH*CEPGGCTEWLCWHP
Trigger: TGGGTGCCAGCAGAGCCATTCAGTACAACCCCCAGGCTCACAGCAGTGGCTTCTAGGAAACTGGGAGTTTAGATCAGCTTTACAGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 90 bp TGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTaGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGG +
Preference number: 1 (lower is better)
Translates to: CPKAESRSRIRCGHL*CGHSRPAMWTDGRW
Trigger: CCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR GCA 90 bp GTGGGTGCCTTCCAAATCTCTGCCACAGAATCTGAACTTGCACTTTaGAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTG +
Preference number: 1 (lower is better)
Translates to: VGAFQISATESELAL*SLLVRAAKFALPGV
Trigger: CACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGCAAGTTCAGATTCTGTGGCAGAGATTTGGAAGGCACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTaGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: QEGPSTGLIEGSLPN*HEQLTVSLKSFSGR
Trigger: CCTTCCAGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR CCA 90 bp ATATCCCAGATGTTTAACTTCTGGCTGGAGGGAGGGAACTTAATTTaGTTCATTATCTACTGGGTACCTTTCCTGTGCGGAGGGGAGGAC +
Preference number: 1 (lower is better)
Translates to: ISQMFNFWLEGGNLI*FIIYWVPFLCGGED
Trigger: GTCCTCCCCTCCGCACAGGAAAGGTACCCAGTAGATAATGAACCAAATTAAGTTCCCTCCCTCCAGCCAGAAGTTAAACATCTGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR TCA 90 bp AGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTTCTTaGCATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTC +
Preference number: 1 (lower is better)
Translates to: SNCLNFPERVTYFTS*HLGRTVATQWQVTV
Trigger: GACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR TCA 90 bp GTGTGTGCCCATGTGTGCAAGGAGATAGATAGATTCTCAATCCAGTaGAGCAGTAGCCAGCTAGAACAGAACACTGATTGTGGGCTATTA +
Preference number: 1 (lower is better)
Translates to: VCAHVCKEIDRFSIQ*SSSQLEQNTDCGLL
Trigger: TAATAGCCCACAATCAGTGTTCTGTTCTAGCTGGCTACTGCTTCACTGGATTGAGAATCTATCTATCTCCTTGCACACATGGGCACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR GCA 90 bp GACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGGAGAGAACAAGTTTCCACTaGCAGCTCTGGCCCTCACCC +
Preference number: 2 (lower is better)
Translates to: DSTVTAPVSEPPDRFWEERTSFH*QLWPSP
Trigger: GGGTGAGGGCCAGAGCTGGCAGTGGAAACTTGTTCT...CTCCTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR TCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGACTCAAGGGCAGCTGTTaGGGCCTGGAATTCCTCACT +
Preference number: 2 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRLKGSC*GLEFLT
Trigger: AGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAG...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR GCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAACCAAGATTGCACCACTaGACTCCAGCCCGGTTGACA +
Preference number: 2 (lower is better)
Translates to: TWTGSSLEVGAFQISATEPRLHH*TPARLT
Trigger: TGTCAACCGGGCTGGAGTGCAGTGGTGCAATCTTGG...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTATGGTCATCTGTGGTGTaGACACAGCAGACCTGCCAT +
Preference number: 2 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVWSSVV*TQQTCH
Trigger: ATGGCAGGTCTGCTGTGTCCACACCACAGATGACCA...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR GCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAAGGTGGAGATTGTGTGTaGCCATGTGTGCAAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TWTGSSLEVGAFQISATEGGDCV*PCVQGD
Trigger: ATCTCCTTGCACACATGGGCACACACAATCTCCACC...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGGGGTCACTTCCAAACTaGCACGAGCAGTTAACAGTG +
Preference number: 2 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVGSLPN*HEQLTV
Trigger: CACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR CCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTATGGACTGACGGTAGATaGGAGAACCGCTTGTTAGTG +
Preference number: 2 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVWTDGR*ENRLLV
Trigger: CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCA...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR CAA 90 bp CCATGGGAGTTTTCTGTCAGCATGTTTTTGAGCTGTCCTGGTAACTaGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: PWEFSVSMFLSCPGN*DGKQSGGGCLPNLC
Trigger: GCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGACAGAAAACTCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR GCA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTTCACACTTCTGCCTGTaGTCCTCAAGGGCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPSHFCL*SSRAAV
Trigger: AACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGA...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR GCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTAGAACAAGTTTCCACTaGCAGCTCTGGCCCTCACCC +
Preference number: 2 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPRTSFH*QLWPSP
Trigger: GGGTGAGGGCCAGAGCTGGCAGTGGAAACTTGTTCT...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR CAA 90 bp TGTCACTTCTTCCTAGAGCCATGGGAGTTTTCTGTCAGCATGTTTTaGAGCTGTCCTGGTAACTTGGACGGGAAGCAGTCTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: CHFFLEPWEFSVSMF*SCPGNLDGKQSGGG
Trigger: CCCACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGACAGAAAACTCCCATGGCTCTAGGAAGAAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR GCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAAGTGTGTGCCCATGTGTaGAAGGAGATAGATAGATTC +
Preference number: 2 (lower is better)
Translates to: TWTGSSLEVGAFQISATEVCAHV*KEIDRF
Trigger: GAATCTATCTATCTCCTTGCACACATGGGCACACAC...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR GCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAATCTGAACTTGCACTTTaGAGCCTGTTAGTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: TWTGSSLEVGAFQISATESELAL*SLLVRA
Trigger: AGCTCTGACTAACAGGCTGCAAAGTGCAAGTTCAGA...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAAAAGGAGAAAGCCAGGTaGATAGATGAAACCTACAGG +
Preference number: 2 (lower is better)
Translates to: TWTGSSLEVGAFQISATEKEKAR*IDETYR
Trigger: CCTGTAGGTTTCATCTATCCACCTGGCTTTCTCCTT...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAAAGGAGAAAGCCAGGTaGATAGATGAAACCTACAGG +
Preference number: 2 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRKEKAR*IDETYR
Trigger: CCTGTAGGTTTCATCTATCCACCTGGCTTTCTCCTT...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR TCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTCTCAAGGGCAGCTGTTaGGGCCTGGAATTCCTCACT +
Preference number: 2 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCLKGSC*GLEFLT
Trigger: AGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAG...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR TCA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTAGATTCTCAATCCAGTaGAGCAGTAGCCAGCTAGAA +
Preference number: 2 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPRFSIQ*SSSQLE
Trigger: TTCTAGCTGGCTACTGCTTCACTGGATTGAGAATCT...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGAGCAGACCTGCCATGTaGACTGACGGTAGATGGGAG +
Preference number: 2 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLSRPAM*TDGRWE
Trigger: CTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCT...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR CAA 90 bp AGGAGCCAGCCCCCTATGAATTGTATCACTTGTATAGATAGAGATTaGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: RSQPPMNCITCIDRD*TSGPPWMVEIVCAH
Trigger: ATGGGCACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACAAGTGATACAATTCATAGGGGGCTGGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR TCA 90 bp GTCAGCATGTTTTTGAGCTGTCCTGGTAACTTGGACGGGAAGCAGTCTGGAGGTATTTCCCTGAAAGGGTaGCATACTTCACTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: VSMFLSCPGNLDGKQSGGISLKG*HTSLLD
Trigger: GTCAAGAAGTGAAGTATGTCACCCTTTCAGGGAAAT...ACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR GCA 90 bp TTTTTATTCGTAAGGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTCACACTTCTGCCTGTaGTCCTCAAGGGCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: FLFVRHQDRTVLATLLFQSHFCL*SSRAAV
Trigger: AACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGA...CTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR GCA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTTCCTTAAAAATGGACTaGAAATCTGGATCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPSLKMD*KSGSVS
Trigger: TGACACTGATCCAGATTTGCAGTCCATTTTTAAGGA...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CCA 90 bp ACTGATTGTGGGCTATTAAAGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAAGATGTGGTCATCTGTaGTGTGGACACAGCAGACCT +
Preference number: 2 (lower is better)
Translates to: TDCGLLKEFLISYGTRFPRCGHL*CGHSRP
Trigger: AGGTCTGCTGTGTCCACACCACAGATGACCACATCT...TGGGAATCTGGTGCCATAACTAATGAGAAACTCCTTTAATAGCCCACAATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR GCA 72 bp CACTGCTGTGAGCCTGGGGGTTGTACTGAATGGCTCTaGTGGCACCCAAGAGCAGCTGACTCCACTGTCACT +
Preference number: 3 (lower is better)
Translates to: HCCEPGGCTEWL*WHPRAADSTVT
Trigger: AGTGACAGTGGAGTCAGCTGCTCTTGGGTGCCAGCAGAGCCATTCAGTACAACCCCCAGGCTCACAGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR-3UTR CAA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGCCTCAAGGGCAGCTGTaGAGGCCTGGAATTCCTCAC +
Preference number: 3 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVPQGQL*RPGIPH
Trigger: GTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGG...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR CCA 72 bp GGTCATCTGTGGTGTGGACACAGCAGACCTGCCATGTaGACTGACGGTAGATGGGAGAACCGCTTGTTAGTG +
Preference number: 3 (lower is better)
Translates to: GHLWCGHSRPAM*TDGRWENRLLV
Trigger: CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR CAA 90 bp GTCAGCATGTTTTTGAGCTGTCCTGGTAACTTGGACGGGAAGCAGTCTGGAGGTCCTGGATGGTGGAGATaGTGTGTGCCCATGTGTGCA +
Preference number: 3 (lower is better)
Translates to: VSMFLSCPGNLDGKQSGGPGWWR*CVPMCA
Trigger: TGCACACATGGGCACACACAATCTCCACCATCCAGG...ACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR TCA 72 bp GGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAATCTaGACTTGCACTTTGCAGCCTGTTAGTCAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GGGCLPNLCHRI*TCTLQPVSQSC
Trigger: GCAGCTCTGACTAACAGGCTGCAAAGTGCAAGTTCAGATTCTGTGGCAGAGATTTGGAAGGCACCCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 72 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTaGTGTGGACACAGCAGACCTGCCATGTGGACTGAC +
Preference number: 3 (lower is better)
Translates to: AESRSRIRCGHL*CGHSRPAMWTD
Trigger: GTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR CAA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATCCTCAAGGGCAGCTGTaGAGGCCTGGAATTCCTCAC +
Preference number: 3 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNPQGQL*RPGIPH
Trigger: GTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGG...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR CAA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACAGATGGGAGAACCGCTaGTTAGTGTTCTGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDRWENR*LVFWAS
Trigger: GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCT...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR GCA 72 bp AGATCAATTACATTCACAAGTTCACACTTCTGCCTGTaGTCCTCAAGGGCAGCTGTTGAGGCCTGGAATTCC +
Preference number: 3 (lower is better)
Translates to: RSITFTSSHFCL*SSRAAVEAWNS
Trigger: GGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR-3UTR CAA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTTCTAGAAGCAAAAATTaGACCTCTTGGAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPSRSKN*TSWSTE
Trigger: CTCTGTGCTCCAAGAGGTCAAATTTTTGCTTCTAGA...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 72 bp CCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTaGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTC +
Preference number: 3 (lower is better)
Translates to: PSTGLIEGSLPN*HEQLTVSLKSF
Trigger: GAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR GCA 72 bp TTCCAAATCTCTGCCACAGAATCTGAACTTGCACTTTaGAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTA +
Preference number: 3 (lower is better)
Translates to: FQISATESELAL*SLLVRAAKFAL
Trigger: TAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGCAAGTTCAGATTCTGTGGCAGAGATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 72 bp ATGTTTAACTTCTGGCTGGAGGGAGGGAACTTAATTTaGTTCATTATCTACTGGGTACCTTTCCTGTGCGGA +
Preference number: 3 (lower is better)
Translates to: MFNFWLEGGNLI*FIIYWVPFLCG
Trigger: TCCGCACAGGAAAGGTACCCAGTAGATAATGAACCAAATTAAGTTCCCTCCCTCCAGCCAGAAGTTAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CCA 72 bp ATGTATGTAGAGAGGCTGCTAAGAAATGAGTGCCCCTaGCATGAAGACGTCATATCCCAGATGTTTAACTTC +
Preference number: 3 (lower is better)
Translates to: MYVERLLRNECP*HEDVISQMFNF
Trigger: GAAGTTAAACATCTGGGATATGACGTCTTCATGCCAGGGGCACTCATTTCTTAGCAGCCTCTCTACATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR TCA 72 bp CATGTGTGCAAGGAGATAGATAGATTCTCAATCCAGTaGAGCAGTAGCCAGCTAGAACAGAACACTGATTGT +
Preference number: 3 (lower is better)
Translates to: HVCKEIDRFSIQ*SSSQLEQNTDC
Trigger: ACAATCAGTGTTCTGTTCTAGCTGGCTACTGCTTCACTGGATTGAGAATCTATCTATCTCCTTGCACACATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR GCA 72 bp ATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTaGCTGAATTTCCCTGAAAGGGTGACATACTTCACT +
Preference number: 3 (lower is better)
Translates to: IELFLPPSYFSN*LNFPERVTYFT
Trigger: AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
3UTR CCA 72 bp ATAAAGACAGGTGTCCTTAAAAATGGACTGCAAATCTaGATCAGTGTCAGGTCTGCTTTAGGGTCCATGAAA +
Preference number: 3 (lower is better)
Translates to: IKTGVLKNGLQI*ISVRSALGSMK
Trigger: TTTCATGGACCCTAAAGCAGACCTGACACTGATCCAGATTTGCAGTCCATTTTTAAGGACACCTGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR TCA 72 bp CTGAAAGACCCCAAGGAAATTCTAGAAGCAAAAATTTaGCCTCTTGGAGCACAGAGACTAAGTATAAGTGGA +
Preference number: 3 (lower is better)
Translates to: LKDPKEILEAKI*PLGAQRLSISG
Trigger: TCCACTTATACTTAGTCTCTGTGCTCCAAGAGGTCAAATTTTTGCTTCTAGAATTTCCTTGGGGTCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGGAGCGCAGCGGCGCGTGCTaGGGATGCTCCCGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: DSTVTAPVSEPPDRFWEERSGAC*GCSRAN
Trigger: GTTCGCCCGGGAGCATCCGCAGCACGCGCCGCTGCG...CTCCTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTACCCGCGCTGCCAGCGTaGCCCGCTGTCCATGGAGGC +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVPALPA*PAVHGG
Trigger: GCCTCCATGGACAGCGGGGCACGCTGGCAGCGCGGG...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGAATTCCTCACTGGAGAGACAGGAGCTCTaGGCCCGGCCGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: HFCLCSSRAAVEAWNSSLERQEL*ARPAHG
Trigger: GCCATGGGCCGGCCGGGCCCAGAGCTCCTGTCTCTC...CAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGCCGCCGGGGAAACTTTaGAGCGGCCGCCGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWPPGKL*SGRRRH
Trigger: GTGGCGACGGCGGCCGCTGCAAAGTTTCCCCGGCGG...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAAGCGAACAGCCAGTACTaGCGGGCCAGCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: TWTGSSLEVGAFQISATEANSQY*RASSRA
Trigger: GGCCCGGGAGCTGGCCCGCCAGTACTGGCTGTTCGC...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGGAGGGCGAGCGCTGGAAGTaGTGGAGCATGTCCACGACC +
Preference number: 4 (lower is better)
Translates to: DSTVTAPVSEPPDRFWEEGERWK*WSMSTT
Trigger: GGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCC...CTCCTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGGAGTCTATGGCCCGCAGGTaGCTCCGGGAGGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: DSTVTAPVSEPPDRFWEESMARR*LREDES
Trigger: GGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGA...CTCCTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGAGCCAGTGGGGTGCCTaGCCCACACTGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHESQWGA*PTLLPT
Trigger: GGTGGGCAGCAGTGTGGGGCAGGCACCCCACTGGCT...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAGGGCAGGCCCGTTCATaGCGGAGACCCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVGQARS*RRPRWC
Trigger: GCACCACCTGGGTCTCCGCCATGAACGGGCCTGCCC...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTGGCGCCGCACTCGAGTaGGATGGGCGAGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICGAALE*DGRALE
Trigger: TTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCC...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAGGCGCCGCACTCGAGTaGGATGGGCGAGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRGAALE*DGRALE
Trigger: TTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCC...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGGGGCTCCCAGCCAACTaGCACAGCCAGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWGLPAN*HSQARS
Trigger: GGACCTGGCCTGGCTGTGCCAGTTGGCTGGGAGCCC...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR GCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAACCAGCCCTCGGCCTGTaGACTCCGAGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TWTGSSLEVGAFQISATEPALGL*TPRAQP
Trigger: TGGCTGAGCTCTCGGAGTGCACAGGCCGAGGGCTGG...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGGGAAAGTGGAGGTGCTaGACACGGCACTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVGKWRC*TRHWPR
Trigger: GCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTCC...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp GCTGACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGTGGTGGGATGTGCTGTaGCTATGGTGGGCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ADSTVTAPVSEPPDRFWEWWDVL*LWWASC
Trigger: GCAGCTAGCCCACCATAGGCACAGCACATCCCACCA...CTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GCTGACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGCCCGGGCTCGGAAAATaGCCAGCGCCTCATCATTTC +
Preference number: 4 (lower is better)
Translates to: ADSTVTAPVSEPPDRFWEPGLGK*PAPHHF
Trigger: GAAATGATGAGGCGCTGGCCATTTTCCGAGCCCGGG...CTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GCAGGTGACTGTCCCGAGGATGCAGTAGACAAGCCAGCATGCTGGCTCAGACTGGGTGCTGCAGGCTGTTaGCCAGTTCTTCGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGDCPEDAVDKPACWLRLGAAGC*PVLRAK
Trigger: CTTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACC...CAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GCAGGTGACTGTCCCGAGGATGCAGTAGACAAGCCAGCATGCTGGCTCAGACTGGTGGCTCCGGGAGGATaGGTCCATTTCGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: AGDCPEDAVDKPACWLRLVAPGG*VHFVVR
Trigger: TCGGACTACGAAATGGACTCATCCTCCCGGAGCCAC...CAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGGCCTGGGGGTTGTACTaGATGGCTCTGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHEAWGLY*MALLAP
Trigger: GGGTGCCAGCAGAGCCATTCAGTACAACCCCCAGGC...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAGAGGGAAAGTGGAGGTaGTGCACACGGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVEGKWR*CTRHWP
Trigger: GGGCCAGTGCCGTGTGCAGCACCTCCACTTTCCCTC...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGACTATGGTGGGCTAGCTaGAGCCAGTGGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRLWWAS*SQWGAC
Trigger: GCAGGCACCCCACTGGCTGCAGCTAGCCCACCATAG...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGAATTCCTCACTGAAATGGTCCGTCTTCTaGCAGGCCGGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HFCLCSSRAAVEAWNSSLKWSVF*QAGSSS
Trigger: GCTGCTGGACCCGGCCTGCCAGAAGACGGACCATTT...CAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTGGGATGGGCGAGCGCTaGAAGTGGTGGAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICGMGER*KWWSMS
Trigger: GGACATGCTCCACCACTTCCAGCGCTCGCCCATCCC...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGACGCACTCGAGTGGGATaGGCGAGCGCTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRRTRVG*ASAGSG
Trigger: ACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCG...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCGGGAAGGCCCAACTCTaGACCCCAGTGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASGKAQL*TPVRKG
Trigger: TCCCTTCCTCACTGGGGTTCAGAGTTGGGCCTTCCC...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTACCACTCAGTGGCAGGTaGCTGTCCCGAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVPLSGR*LSRGCS
Trigger: ACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGG...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGGAGTGTTCCCCCACCCTCTaGAAGACCCCAAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: DSTVTAPVSEPPDRFWEECSPTL*KTPRKF
Trigger: GAATTTCCTTGGGGTCTTTCAGAGGGTGGGGGAACA...CTCCTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGGGCGGGTGGATCACCTaGGGTCAGACATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVGGWIT*GQTFET
Trigger: GGTCTCGAATGTCTGACCTCAGGTGATCCACCCGCC...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAAATCCCATGTCCTTCTaGGCTCCACCCGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRNPMSF*APPGTD
Trigger: GTCCGTGCCGGGTGGAGCTCAGAAGGACATGGGATT...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR GCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGAGGGCGAGGAGGGCTaGAGGGCAGGCCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPEGEEG*RAGPFM
Trigger: CATGAACGGGCCTGCCCTGCAGCCCTCCTCGCCCTC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTAAGAGGTCGGTGAACTaGAGCGACACCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICKRSVN*SDTSSA
Trigger: CGCCGAGCTGGTGTCGCTGCAGTTCACCGACCTCTT...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCGCATCTCAAGCCGTGTaGACCACCGGACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASASQAV*TTGPPG
Trigger: TCCAGGAGGTCCGGTGGTGCACACGGCTTGAGATGC...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTAGGGCAGGAACTTCTTaGCCAGGCCAGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPRAGTS*PGQAGR
Trigger: CCGCCCGGCCTGGCCTGGCCAAGAAGTTCCTGCCCT...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCACGACCGAGGGAAAGTaGAGGTGCTGCACACGGCAC +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASTTEGK*RCCTRH
Trigger: GTGCCGTGTGCAGCACCTCCACTTTCCCTCGGTCGT...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGACGACCGAGGGAAAGTaGAGGTGCTGCACACGGCAC +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWTTEGK*RCCTRH
Trigger: GTGCCGTGTGCAGCACCTCCACTTTCCCTCGGTCGT...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCGAGCGCTGGAAGTGGTaGAGCATGTCCACGACCGAG +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASERWKW*SMSTTE
Trigger: CTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTC...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTGGTGCTGCAGGCTGTTaGCCAGTTCTTCGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICGAAGC*PVLRAK
Trigger: CTTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACC...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACTCCGCCGCCAGCGCTTaGCAGTTGCGGGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDSAASA*QLREDA
Trigger: CGCATCCTCCCGCAACTGTCAAGCGCTGGCGGCGGA...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGGTGGCTCCGGGAGGATaGGTCCATTTCGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHEVAPGG*VHFVVR
Trigger: TCGGACTACGAAATGGACTCATCCTCCCGGAGCCAC...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTACTTTCACTCTGGAGATaGGGCCGTGGAACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVLSLWR*GRGTRG
Trigger: ACCCCTGGTTCCACGGCCCCATCTCCAGAGTGAAAG...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAGAGCTGCTTTCACTCTaGAGATGGGGCCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRELLSL*RWGRGT
Trigger: GGTTCCACGGCCCCATCTCCAGAGTGAAAGCAGCTC...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCCGACTACCACGTAGCTaGAGAGCCGGACATCACAGG +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASRLPRS*RAGHHR
Trigger: CCTGTGATGTCCGGCTCTCCAGCTACGTGGTAGTCG...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTGTACTGATTGTCTATaGCCCGCAGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVCTDCL*PAGGSG
Trigger: CCCGGAGCCACCTGCGGGCCATAGACAATCAGTACA...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCAGGTGACTGTCCCGAGGATGCAGTAGACAAGCCAGCATGCTGGCTCAGACTGGAAGCAGTCTGGAGGTaGGTGCCTTCCAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: AGDCPEDAVDKPACWLRLEAVWR*VPSKSL
Trigger: CAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTC...CAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGGAGCTCAGCCATCCATaGATTCAGCTGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVELSHP*IQLLLV
Trigger: GACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTC...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAGGAGACCCTCTGGGCTaGGCCCCCGGGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSGDPLG*APGDSQ
Trigger: CTGGCTGTCCCCGGGGGCTCAGCCCAGAGGGTCTCC...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGGCACCCAAGAGCAGCTaGCTCCACTGTCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLAPKSS*LHCHCP
Trigger: GGGGCAGTGACAGTGGAGTCAGCTGCTCTTGGGTGC...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAGGTGGCCCGGGCCCATaGCGCCCCGCGCCGTTATGT +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKGGPGP*RPAPLC
Trigger: ACATAACGGCGCGGGGCGGCATGGGCCCGGGCCACC...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTCCAGCGCTTGACAGTTaGGGGAGGATGCGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSPALDS*GRMRPR
Trigger: CCGGGGGCGCATCCTCCCGCAACTGTCAAGCGCTGG...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCTCATGCTCCAGGTGCTaGAGGCTGTTGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASSCSRC*RLLASS
Trigger: AGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGA...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGAGAACAAGTTTCCACTaGCAGCTCTGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWRTSFH*QLWPSP
Trigger: GGGTGAGGGCCAGAGCTGGCAGTGGAAACTTGTTCT...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGACAGTCTGGAGGTGGGTaGCTTCCAAATCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRQSGGG*LPNLCH
Trigger: GTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTG...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTCTTCAGCGCCTCGGGTaGCGGCTCCCGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTLQRLG*RLPGQA
Trigger: AGCCTGGCCCGGGAGCCGCCACCCGAGGCGCTGAAG...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CGGCATCCTCTAACAAGAACTACATCTGTAAACAATAAGGAGAAAGCCAGGTGGGTGCCCCGCTGTCCATaGAGGCCTCGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RHPLTRTTSVNNKEKARWVPRCP*RPRRPG
Trigger: GCCTGGCCGACGAGGCCTCCATGGACAGCGGGGCAC...CCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGGGACCTCCTGGATGCTaGAGCAAGCTGCTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVGPPGC*SKLLVA
Trigger: AGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCC...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GTCAGCATGTTTTTGAGCTGTCCTGGTAACTTGGACGGGAAGCAGTCTGGAGGTATCTGTGCTGCCCCTTaGGGAGCTGGACGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: VSMFLSCPGNLDGKQSGGICAAP*GAGRAR
Trigger: CCTAGCACGTCCAGCTCCCCAAGGGGCAGCACAGAT...ACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACTGCTGCACACGGCACTaGCCCCGCTCTGTCAGCGAC +
Preference number: 4 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDCCTRH*PRSVSD
Trigger: GTCGCTGACAGAGCGGGGCCAGTGCCGTGTGCAGCA...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACGCACTCGAGTGGGATaGGCGAGCGCTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRRTRVG*ASAGSG
Trigger: ACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCG...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTTCTATGGCCCGCAGGTaGCTCCGGGAGGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPSMARR*LREDES
Trigger: GGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGA...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGCTGGAAGAGGTCGGTaGACTGCAGCGACACCAGCT +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPAGRGR*TAATPA
Trigger: AGCTGGTGTCGCTGCAGTTCACCGACCTCTTCCAGC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGCTCCCACCTCAAAGATaGTGTCTGTCCGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVLPPQR*CLSGPS
Trigger: TGAAGGACCGGACAGACATCATCTTTGAGGTGGGAG...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAAGACTCTGAATCCCAGTaGGGAAGGGAGAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TWTGSSLEVGAFQISATEDSESQ*GREKGK
Trigger: CTTCCCTTTCTCCCTTCCTCACTGGGATTCAGAGTC...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAAACTCTGAACCCCAGTaGGGAAGGGACTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVNSEPQ*GRDSES
Trigger: GGATTCAGAGTCCCTTCCTCACTGGGGTTCAGAGTT...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGGGAAGGCCCAACTCTaGACCCCAGTGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPGKAQL*TPVRKG
Trigger: TCCCTTCCTCACTGGGGTTCAGAGTTGGGCCTTCCC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAGTAATCCCAGCTACTTaGGAGGTCGAGGCAGAATCG +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVVIPAT*EVEAES
Trigger: CGATTCTGCCTCGACCTCTCAAGTAGCTGGGATTAC...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAATTCAGAAGAAGAGGTaGGAGCAAGGGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVIQKKR*EQGLLG
Trigger: CCCCAGAAGCCCTTGCTCTCACCTCTTCTTCTGAAT...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR GCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTCGGAGACCCAGGTGGTaGGGCCGGGCTGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCRRPRW*GRAERQ
Trigger: CTGTCTCTCAGCCCGGCCGCACCACCTGGGTCTCCG...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAGGCGCGTGCTGCGGATaGTCCCGGGCGAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSGACCG*SRANSQ
Trigger: CTGGCTGTTCGCCCGGGAGCATCCGCAGCACGCGCC...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACGAGGGAAAGTGGAGGTaGTGCACACGGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDEGKWR*CTRHWP
Trigger: GGGCCAGTGCCGTGTGCAGCACCTCCACTTTCCCTC...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGAGGCTCATGCTCCAGGTaGTGCAGGCTGTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRGSCSR*CRLLAS
Trigger: ACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCC...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGCTGCGGCGAAAGTGCTaGAAGGAGCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLLRRKC*KEQGPG
Trigger: GCCCGGGCCCTGCTCCTTCCAGCACTTTCGCCGCAG...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTGGTCATCTGTGGTGTaGACACAGCAGACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVWSSVV*TQQTCH
Trigger: ATGGCAGGTCTGCTGTGTCCACACCACAGATGACCA...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACCACTGCCCCCGTTTCTaGGCCTCCAGACAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDHCPRF*ASRQVL
Trigger: CAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTG...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CGGCATCCTCTAACAAGAACTACATCTGTAAACAATAAGGAGAAAGCCAGGTGGAGGCTGCGGCGAAAGTaGTGGAAGGAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RHPLTRTTSVNNKEKARWRLRRK*WKEQGP
Trigger: CGGGCCCTGCTCCTTCCAGCACTTTCGCCGCAGCCT...CCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACGCATCTCAAGCCGTGTaGACCACCGGACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDASQAV*TTGPPG
Trigger: TCCAGGAGGTCCGGTGGTGCACACGGCTTGAGATGC...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGCCAGCCCTCGGCCTGTaGACTCCGAGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLPALGL*TPRAQP
Trigger: TGGCTGAGCTCTCGGAGTGCACAGGCCGAGGGCTGG...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGAGGGCTGAGGGAATATaGATCTCTGCTTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVRAEGI*ISASVL
Trigger: GAGCACAGAAGCAGAGATGCATATTCCCTCAGCCCT...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGGGAAGAGGACCGTGTTaGAGGAACCTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLGRGPC*RNLVVG
Trigger: CCCAACCACCAGGTTCCTGCAACACGGTCCTCTTCC...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGGAAGAGGACCGTGTTaGAGGAACCTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPGRGPC*RNLVVG
Trigger: CCCAACCACCAGGTTCCTGCAACACGGTCCTCTTCC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAGGTGGAGATTGTGTGTaGCCATGTGTGCAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVGGDCV*PCVQGD
Trigger: ATCTCCTTGCACACATGGGCACACACAATCTCCACC...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTTGGCGGAGACCCAGGTaGTGCGGCCGGGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTWRRPR*CGRAER
Trigger: TCTCTCAGCCCGGCCGCACCACCTGGGTCTCCGCCA...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGAAGCTGCTTGTAGCTTaGGCCTTGAACTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWKLLVA*ALNSWV
Trigger: CACCCAAGAGTTCAAGGCCCAAGCTACAAGCAGCTT...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGCCAGGAGAAGCACCTTaGTTAAGGGAATCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVPGEAP*LRESVL
Trigger: CAGCACAGATTCCCTTAACCAAGGTGCTTCTCCTGG...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGCCAGGAGAAGCACCTTaGTTAAGGGAATCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHEPGEAP*LRESVL
Trigger: CAGCACAGATTCCCTTAACCAAGGTGCTTCTCCTGG...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACAAATGGTCCGTCTTCTaGCAGGCCGGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDKWSVF*QAGSSS
Trigger: GCTGCTGGACCCGGCCTGCCAGAAGACGGACCATTT...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CGGCATCCTCTAACAAGAACTACATCTGTAAACAATAAGGAGAAAGCCAGGTGGTGCTGCACACGGCACTaGCCCCGCTCTGTCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RHPLTRTTSVNNKEKARWCCTRH*PRSVSD
Trigger: GTCGCTGACAGAGCGGGGCCAGTGCCGTGTGCAGCA...CCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGACCTGGAATTCCTCACTaGTCAGAGAGGTGTGTACTG +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRPGIPH*SERCVL
Trigger: CAGTACACACCTCTCTGACCAGTGAGGAATTCCAGG...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGCCTGGAATTCCTCACTaGTCAGAGAGGTGTGTACTG +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWPGIPH*SERCVL
Trigger: CAGTACACACCTCTCTGACCAGTGAGGAATTCCAGG...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGGGGTCACTTCCAAACTaGCACGAGCAGTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWGSLPN*HEQLTV
Trigger: CACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGAGATGTGGTCATCTGTaGTGTGGACACAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWRCGHL*CGHSRP
Trigger: AGGTCTGCTGTGTCCACACCACAGATGACCACATCT...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACACAGTGGCCACTCAGTaGCAGGTGACTGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDTVATQ*QVTVPR
Trigger: CCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGT...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACGTAGAAGTTGCCGGCTaGGGCCTGGTCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDVEVAG*GLVRTG
Trigger: TCCAGTCCTGACCAGGCCCCAGCCGGCAACTTCTAC...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTCAAGGGCTTCTGGGGTaGAGGGGCTCCCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSQGLLG*RGSQPT
Trigger: AGTTGGCTGGGAGCCCCTCCACCCCAGAAGCCCTTG...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR CCA 90 bp CGGCATCCTCTAACAAGAACTACATCTGTAAACAATAAGGAGAAAGCCAGGTGGGAGAGCAAGGGCTTCTaGGGTGGAGGGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RHPLTRTTSVNNKEKARWESKGF*GGGAPS
Trigger: GCTGGGAGCCCCTCCACCCCAGAAGCCCTTGCTCTC...CCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR TCA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGAGTGAGGAAGGGACTCTaGATCCCAGTGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRVRKGL*IPVRKG
Trigger: TCCCTTCCTCACTGGGATTCAGAGTCCCTTCCTCAC...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTCAGAGAGGTGTGTACTaGTTGTCTATGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPQRGVY*LSMARR
Trigger: CCTGCGGGCCATAGACAATCAGTACACACCTCTCTG...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGCAGAGAGGTGTGTACTaGTTGTCTATGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLQRGVY*LSMARR
Trigger: CCTGCGGGCCATAGACAATCAGTACACACCTCTCTG...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTCTCAAGGGCAGCTGTTaGGGCCTGGAATTCCTCACT +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPLKGSC*GLEFLT
Trigger: AGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAG...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTGGACACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGACTGTCAGCATGTTTTTaGGCTGTCCTGGTAACTTGG +
Preference number: 4 (lower is better)
Translates to: ICGVDTADLPCGLTVDGRLSACF*AVLVTW
Trigger: CCAAGTTACCAGGACAGCTCAAAAACATGCTGACAG...TCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CACATAAAGAAAGGTGTTGGCTTAGTGTCACTTCTTCCTAGAGCCATGGGAGTTGCCGCCGCTACGGCGTaGAACTCACAGAACTCGCTC +
Preference number: 4 (lower is better)
Translates to: HIKKGVGLVSLLPRAMGVAAATA*NSQNSL
Trigger: GAGCGAGTTCTGTGAGTTGCACGCCGTAGCGGCGGC...AACTCCCATGGCTCTAGGAAGAAGTGACACTAAGCCAACACCTTTCTTTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGACCGGACCTCCTGGATaGTGGAGCAAGCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLTGPPG*WSKLLV
Trigger: TACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGT...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp AGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGAAAGTGGAGGTGCTaGACACGGCACTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RAFVLKLRVEAGLDVVICGKWRC*TRHWPR
Trigger: GCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTCC...ACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp ATCTGTAAAGCTGATCTAAACTCCCAGTTTCCTAGAAGCCACTGCTGTGAGCCTGGCTCATGCTCCAGGTaGTGCAGGCTGTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ICKADLNSQFPRSHCCEPGSCSR*CRLLAS
Trigger: ACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCC...AGGCTCACAGCAGTGGCTTCTAGGAAACTGGGAGTTTAGATCAGCTTTACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTTGTACTGAATGGCTCTaGTGGCACCCAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPCTEWL*WHPRAA
Trigger: AGCTGCTCTTGGGTGCCAGCAGAGCCATTCAGTACA...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGCCAAGATTGCACCACTaGACTCCAGCCCGGTTGACA +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLPRLHH*TPARLT
Trigger: TGTCAACCGGGCTGGAGTGCAGTGGTGCAATCTTGG...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTCAGGAAGGTGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPQEGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCCACCTTCCTG...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGGGCGAGCGCTGGAAGTaGTGGAGCATGTCCACGACC +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLGERWK*WSMSTT
Trigger: GGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCC...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGGGGATGGGCGAGCGCTaGAAGTGGTGGAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLGMGER*KWWSMS
Trigger: GGACATGCTCCACCACTTCCAGCGCTCGCCCATCCC...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGGGGGTTGTACTGAATaGCTCTGCTGGCACCCAAGA +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPGGCTE*LCWHPR
Trigger: TCTTGGGTGCCAGCAGAGCCATTCAGTACAACCCCC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGACTCTGAATCCCAGTaGGGAAGGGAGAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPDSESQ*GREKGK
Trigger: CTTCCCTTTCTCCCTTCCTCACTGGGATTCAGAGTC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp CAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGGTGAGGAAGGGACTCTaGATCCCAGTGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QLHSQVHTSACAPQGQLLVRKGL*IPVRKG
Trigger: TCCCTTCCTCACTGGGATTCAGAGTCCCTTCCTCAC...CAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGAACTCTGAACCCCAGTaGGGAAGGGACTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLNSEPQ*GRDSES
Trigger: GGATTCAGAGTCCCTTCCTCACTGGGGTTCAGAGTT...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp TCAGACTCTTACTTACTCTTTTGGTTCACACTAATTAGCATTCATTTTCCAGAGGGAGACCCTCTGGGCTaGGCCCCCGGGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SDSYLLFWFTLISIHFPEGDPLG*APGDSQ
Trigger: CTGGCTGTCCCCGGGGGCTCAGCCCAGAGGGTCTCC...CTCTGGAAAATGAATGCTAATTAGTGTGAACCAAAAGAGTAAGTAAGAGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGCTCTTCGAAGAACGATaGTTCAGAAGAAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVLFEER*FRRRGE
Trigger: CTCACCTCTTCTTCTGAATCATCGTTCTTCGAAGAG...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR GCA 90 bp CACATAAAGAAAGGTGTTGGCTTAGTGTCACTTCTTCCTAGAGCCATGGGAGTTAGATGTGGCGGAGGCTaGGGCGAAAGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HIKKGVGLVSLLPRAMGVRCGGG*GESAGR
Trigger: CCTTCCAGCACTTTCGCCGCAGCCTCCGCCACATCT...AACTCCCATGGCTCTAGGAAGAAGTGACACTAAGCCAACACCTTTCTTTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTGTGTGTGCCCATGTGTaGAAGGAGATAGATAGATTC +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICVCAHV*KEIDRF
Trigger: GAATCTATCTATCTCCTTGCACACATGGGCACACAC...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTGATCAGTGTCAGGTCTaGTTTAGGGTCCATGAAATC +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICDQCQV*FRVHEI
Trigger: GATTTCATGGACCCTAAAGCAGACCTGACACTGATC...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGCACCACCGGACCTCCTaGATGCTGGAGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLHHRTS*MLEQAA
Trigger: AGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTG...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCCTCTGACAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGAGCTGCTTTCACTCTaGAGATGGGGCCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ASDRAFVLKLRVEAGLDVELLSL*RWGRGT
Trigger: GGTTCCACGGCCCCATCTCCAGAGTGAAAGCAGCTC...CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGCGTGTTGCAGGAACCTaGTGGTTGGGAGACGACTAC +
Preference number: 4 (lower is better)
Translates to: QLHSQVHTSACAPQGQLLRVAGT*WLGDDY
Trigger: GTAGTCGTCTCCCAACCACCAGGTTCCTGCAACACG...CAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGTGGTCATCTGTGGTGTaGACACAGCAGACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RVEAGLDVVICGVDTADLWSSVV*TQQTCH
Trigger: ATGGCAGGTCTGCTGTGTCCACACCACAGATGACCA...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTAATGGACTGCAAATCTaGATCAGTGTCAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HRDPGQELAASSNKNYICNGLQI*ISVRSA
Trigger: AGCAGACCTGACACTGATCCAGATTTGCAGTCCATT...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCCAGATGTTTAACTTCTaGCTGGAGGGAGGGAACTTA +
Preference number: 4 (lower is better)
Translates to: AMWTDGRWENRLLVFWASQMFNF*LEGGNL
Trigger: TAAGTTCCCTCCCTCCAGCCAGAAGTTAAACATCTG...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp ATCTGTAAAGCTGATCTAAACTCCCAGTTTCCTAGAAGCCACTGCTGTGAGCCTGGACGGGAAGCAGTCTaGAGGTGGGTGCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ICKADLNSQFPRSHCCEPGREAV*RWVPSK
Trigger: TTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCC...AGGCTCACAGCAGTGGCTTCTAGGAAACTGGGAGTTTAGATCAGCTTTACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAATTGCCGGCTGGGGCCTaGTCAGGACTGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKLPAGA*SGLEGE
Trigger: CTCTCCTTCCAGTCCTGACCAGGCCCCAGCCGGCAA...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CAA 72 bp TTTTCTGTCAGCATGTTTTTGAGCTGTCCTGGTAACTaGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FSVSMFLSCPGN*DGKQSGGGCLP
Trigger: TGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGACAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAACCAGGAACACTCCATaGGCATCAGGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKTRNTP*ASGPCS
Trigger: GCTGCAGGGCCCTGATGCTCATGGAGTGTTCCTGGT...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAACCAGGAACACTCCATaGGCATCAGGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSTRNTP*ASGPCS
Trigger: GCTGCAGGGCCCTGATGCTCATGGAGTGTTCCTGGT...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGATGCTTGGCTATCCCCTaGAAGTTGAAAGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRCLAIP*KLKVST
Trigger: CGTGCTCACTTTCAACTTTCAGGGGATAGCCAAGCA...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTCTCAAGGGCAGCTGTTaGGGCCTGGAATTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSLKGSC*GLEFLT
Trigger: AGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAG...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp AGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTCCACTCAGTGGCAGGTaGCTGTCCCGAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: RAFVLKLRVEAGLDVVICPLSGR*LSRGCS
Trigger: ACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGG...ACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGCTAGAAGCAAAAATTTaGCCTCTTGGAGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVLEAKI*PLGAQR
Trigger: TCTCTGTGCTCCAAGAGGTCAAATTTTTGCTTCTAG...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGCCTCTTGGCACCACCTaGGAGATGTATGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLHSQVHTSACAPQGQLLPLGTT*EMYVER
Trigger: CCTCTCTACATACATCTCTCAGGTGGTGCCAAGAGG...CAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GCCTCTGACAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGACCGGACCTCCTGGATaGTGGAGCAAGCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: ASDRAFVLKLRVEAGLDVTGPPG*WSKLLV
Trigger: TACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGT...CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACGGGAATATGCATCTCTaGTTCTGTGCTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDGNMHL*FCALQP
Trigger: GGGCTGGAGAGCACAGAAGCAGAGATGCATATTCCC...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACCTGAACCAGCTGAGCTaGTTTCACTCTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDLNQLS*FHSGDG
Trigger: CCCATCTCCAGAGTGAAAGCAGCTCAGCTGGTTCAG...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATAGAACAAGTTTCCACTaGCAGCTCTGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNRTSFH*QLWPSP
Trigger: GGGTGAGGGCCAGAGCTGGCAGTGGAAACTTGTTCT...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCACACCACCGGACCTCCTaGATGCTGGAGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSHHRTS*MLEQAA
Trigger: AGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTG...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAATCTGTGCTGCCCCTTaGGGAGCTGGACGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSICAAP*GAGRAR
Trigger: CCTAGCACGTCCAGCTCCCCAAGGGGCAGCACAGAT...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTCTTTCACTCTGGAGATaGGGCCGTGGAACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCLSLWR*GRGTRG
Trigger: ACCCCTGGTTCCACGGCCCCATCTCCAGAGTGAAAG...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp TTTTTATTCGTAAGGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGGAGCGCTGGAAGTGGTaGAGCATGTCCACGACCGAG +
Preference number: 4 (lower is better)
Translates to: FLFVRHQDRTVLATLLFQERWKW*SMSTTE
Trigger: CTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTC...CTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATGTTGCAGGAACCTGGTaGTTGGGAGACGACTACCAC +
Preference number: 4 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNVAGTW*LGDDYH
Trigger: GTGGTAGTCGTCTCCCAACCACCAGGTTCCTGCAAC...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTAGCAGACCTGCCATGTaGACTGACGGTAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSSRPAM*TDGRWE
Trigger: CTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCT...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCCTCTGACAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGAGCAGACCTGCCATGTaGACTGACGGTAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: ASDRAFVLKLRVEAGLDVSRPAM*TDGRWE
Trigger: CTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCT...CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGAAGATGTGGTCATCTGTaGTGTGGACACAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRRCGHL*CGHSRP
Trigger: AGGTCTGCTGTGTCCACACCACAGATGACCACATCT...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAACAGTGGCCACTCAGTaGCAGGTGACTGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKTVATQ*QVTVPR
Trigger: CCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGT...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTGACCTCCCTGGATGGTaGAGATTGTGTGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSDLPGW*RLCVPM
Trigger: CATGGGCACACACAATCTCCACCATCCAGGGAGGTC...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GCACTTTGCAGCCTGTTAGTCAGAGCTGCTAAGTTTGCTCTACCTGGTGTGCCTAGAAATGAGTGCCCCTaGCATGAAGACGTCATATCC +
Preference number: 4 (lower is better)
Translates to: ALCSLLVRAAKFALPGVPRNECP*HEDVIS
Trigger: GGATATGACGTCTTCATGCCAGGGGCACTCATTTCT...AGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAGTGCTGTGCCTATGGTaGGCTAGCTGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKVLCLW*ASCSQW
Trigger: CCACTGGCTGCAGCTAGCCCACCATAGGCACAGCAC...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTGATGTGCTGTGCCTATaGTGGGCTAGCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCDVLCL*WASCSQ
Trigger: CTGGCTGCAGCTAGCCCACCATAGGCACAGCACATC...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTCTCCCACCTCAAAGATaGTGTCTGTCCGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSLPPQR*CLSGPS
Trigger: TGAAGGACCGGACAGACATCATCTTTGAGGTGGGAG...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGGAGGGGAGGACCAGTaGCTTTCCATAATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPGGEDQ*LSIISF
Trigger: AAAGCTTATTATGGAAAGTCACTGGTCCTCCCCTCC...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATCTGAACCAGCTGAGCTaGTTTCACTCTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNLNQLS*FHSGDG
Trigger: CCCATCTCCAGAGTGAAAGCAGCTCAGCTGGTTCAG...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTGAGAGTGGTGGGATGTaGTGTGCCTATGGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCESGGM*CAYGGL
Trigger: TAGCCCACCATAGGCACAGCACATCCCACCACTCTC...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CACATAAAGAAAGGTGTTGGCTTAGTGTCACTTCTTCCTAGAGCCATGGGAGTTTGGGCCTTGAACTCTTaGGTGGGTCGAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HIKKGVGLVSLLPRAMGVWALNS*VGRRAP
Trigger: TGGAGCTCTTCGACCCACCCAAGAGTTCAAGGCCCA...AACTCCCATGGCTCTAGGAAGAAGTGACACTAAGCCAACACCTTTCTTTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCACGACTACCACGTAGCTaGAGAGCCGGACATCACAGG +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSRLPRS*RAGHHR
Trigger: CCTGTGATGTCCGGCTCTCCAGCTACGTGGTAGTCG...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGGTTGCAGGAACCTGGTaGTTGGGAGACGACTACCAC +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLVAGTW*LGDDYH
Trigger: GTGGTAGTCGTCTCCCAACCACCAGGTTCCTGCAAC...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACCCAGAAGAACTAAGGTaGGGAAGGCCCAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDPEELR*GRPNSE
Trigger: TTCAGAGTTGGGCCTTCCCCACCTTAGTTCTTCTGG...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTCAGGACCTCCCTGGATaGTGGAGATTGTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTQDLPG*WRLCVP
Trigger: GGGCACACACAATCTCCACCATCCAGGGAGGTCCTG...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CAA 72 bp TTCCTAGAGCCATGGGAGTTTTCTGTCAGCATGTTTTaGAGCTGTCCTGGTAACTTGGACGGGAAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: FLEPWEFSVSMF*SCPGNLDGKQS
Trigger: AGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGACAGAAAACTCCCATGGCTCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATATCCATGAATTCAGCTaGTGCTCGTCTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNIHEFS*CSSPTS
Trigger: TGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGAT...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp GCCTCTGACAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGAGGGCTGAGGGAATATaGATCTCTGCTTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASDRAFVLKLRVEAGLDVRAEGI*ISASVL
Trigger: GAGCACAGAAGCAGAGATGCATATTCCCTCAGCCCT...CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTTCATGCTCCAGGTGCTaGAGGCTGTTGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTSCSRC*RLLASS
Trigger: AGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGA...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTCGTGTTGCAGGAACCTaGTGGTTGGGAGACGACTAC +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTRVAGT*WLGDDY
Trigger: GTAGTCGTCTCCCAACCACCAGGTTCCTGCAACACG...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATCCAGAAGAACTAAGGTaGGGAAGGCCCAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNPEELR*GRPNSE
Trigger: TTCAGAGTTGGGCCTTCCCCACCTTAGTTCTTCTGG...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp ACTGATTGTGGGCTATTAAAGGAGTTTCTCATTAGTTATGGCACCAGATTCCCATGTACTGATTGTCTATaGCCCGCAGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TDCGLLKEFLISYGTRFPCTDCL*PAGGSG
Trigger: CCCGGAGCCACCTGCGGGCCATAGACAATCAGTACA...TGGGAATCTGGTGCCATAACTAATGAGAAACTCCTTTAATAGCCCACAATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTAAGGAGAAAGCCAGGTaGATAGATGAAACCTACAGG +
Preference number: 4 (lower is better)
Translates to: ESRSRIRCGHLWCGHSRPKEKAR*IDETYR
Trigger: CCTGTAGGTTTCATCTATCCACCTGGCTTTCTCCTT...AGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAGCTGTCCTGGTAACTTaGACGGGAAGCAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKAVLVT*TGSSLE
Trigger: CTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGC...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGCTTGGCTATCCCCTaGAAGTTGAAAGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLCLAIP*KLKVST
Trigger: CGTGCTCACTTTCAACTTTCAGGGGATAGCCAAGCA...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTCATGAATTCAGCTGCTaGTCGTCTCCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCHEFSC*SSPTSK
Trigger: CTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATG...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CGGCATCCTCTAACAAGAACTACATCTGTAAACAATAAGGAGAAAGCCAGGTGGCATGAATTCAGCTGCTaGTCGTCTCCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RHPLTRTTSVNNKEKARWHEFSC*SSPTSK
Trigger: CTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATG...CCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp TTTTTATTCGTAAGGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGGGGAATATGCATCTCTaGTTCTGTGCTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FLFVRHQDRTVLATLLFQGNMHL*FCALQP
Trigger: GGGCTGGAGAGCACAGAAGCAGAGATGCATATTCCC...CTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCATCACACTTCTGCCTGTaGTCCTCAAGGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSSHFCL*SSRAAV
Trigger: AACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGA...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTTCACACTTCTGCCTGTaGTCCTCAAGGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTSHFCL*SSRAAV
Trigger: AACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGA...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR GCA 90 bp TCAGACTCTTACTTACTCTTTTGGTTCACACTAATTAGCATTCATTTTCCAGAGGCTCTCGGTAGAAGTTaGCGGCTGGGGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SDSYLLFWFTLISIHFPEALGRS*RLGPGQ
Trigger: CTGACCAGGCCCCAGCCGGCAACTTCTACCGAGAGC...CTCTGGAAAATGAATGCTAATTAGTGTGAACCAAAAGAGTAAGTAAGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp ACTGATTGTGGGCTATTAAAGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGGACCTCCTGGATGCTaGAGCAAGCTGCTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: TDCGLLKEFLISYGTRFPGPPGC*SKLLVA
Trigger: AGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCC...TGGGAATCTGGTGCCATAACTAATGAGAAACTCCTTTAATAGCCCACAATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAAAGCCATTAGATGCTTaGAGGGCACCAAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKKPLDA*RAPSQP
Trigger: AGGCTGGCTTGGTGCCCTCCAAGCATCTAATGGCTT...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGCCTAAAACCCACTTGTaGGATAATTTAATAAGCCAT +
Preference number: 4 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHEPKTHL*DNLISH
Trigger: ATGGCTTATTAAATTATCCCACAAGTGGGTTTTAGG...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp TCAGACTCTTACTTACTCTTTTGGTTCACACTAATTAGCATTCATTTTCCAGAGAAAAGTGGTGTAGGCTaGGCGCGGTGGCTCGCGCCT +
Preference number: 4 (lower is better)
Translates to: SDSYLLFWFTLISIHFPEKSGVG*ARWLAP
Trigger: AGGCGCGAGCCACCGCGCCCAGCCTACACCACTTTT...CTCTGGAAAATGAATGCTAATTAGTGTGAACCAAAAGAGTAAGTAAGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp AGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTCTCTGCCACAGAATCTaGACTTGCACTTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RAFVLKLRVEAGLDVVICLCHRI*TCTLQP
Trigger: AGGCTGCAAAGTGCAAGTTCAGATTCTGTGGCAGAG...ACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp AGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGGTCACTTCCAAACTaGCACGAGCAGTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: RAFVLKLRVEAGLDVVICGSLPN*HEQLTV
Trigger: CACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC...ACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp TTTTTATTCGTAAGGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTGGACTGACGGTAGATaGGAGAACCGCTTGTTAGTG +
Preference number: 4 (lower is better)
Translates to: FLFVRHQDRTVLATLLFQWTDGR*ENRLLV
Trigger: CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCA...CTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCATGGACTGACGGTAGATaGGAGAACCGCTTGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RKERSITFTSSHFCLCSSWTDGR*ENRLLV
Trigger: CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCA...TGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGAAGCTGCTTGTAGCTTaGGCCTTGAACTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: QSFCPKAESRSRIRCGHLKLLVA*ALNSSK
Trigger: CTTCGAAGAGTTCAAGGCCCAAGCTACAAGCAGCTT...CAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR TCA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATATTTCCCTGAAAGGGTaGCATACTTCACTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNISLKG*HTSLLD
Trigger: GTCAAGAAGTGAAGTATGTCACCCTTTCAGGGAAAT...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTTTGCCTGAATTTCCCTaGAAGGGTGACATACTTCAC +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCLPEFP*KGDILH
Trigger: GTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAA...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTAGATTCTCAATCCAGTaGAGCAGTAGCCAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCRFSIQ*SSSQLE
Trigger: TTCTAGCTGGCTACTGCTTCACTGGATTGAGAATCT...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CGGCATCCTCTAACAAGAACTACATCTGTAAACAATAAGGAGAAAGCCAGGTGGTCTGAACTTGCACTTTaGAGCCTGTTAGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RHPLTRTTSVNNKEKARWSELAL*SLLVRA
Trigger: AGCTCTGACTAACAGGCTGCAAAGTGCAAGTTCAGA...CCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGAGGAGGGAACTTAATTTaGTTCATTATCTACTGGGTA +
Preference number: 4 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRGGNLI*FIIYWV
Trigger: TACCCAGTAGATAATGAACCAAATTAAGTTCCCTCC...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
3UTR CAA 72 bp CCCCCTATGAATTGTATCACTTGTATAGATAGAGATTaGACTTCAGGACCTCCCTGGATGGTGGAGATTGTG +
Preference number: 4 (lower is better)
Translates to: PPMNCITCIDRD*TSGPPWMVEIV
Trigger: CACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACAAGTGATACAATTCATAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp TTTTTATTCGTAAGGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTTGCCTGAATTTCCCTaGAAGGGTGACATACTTCAC +
Preference number: 4 (lower is better)
Translates to: FLFVRHQDRTVLATLLFQLPEFP*KGDILH
Trigger: GTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAA...CTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTTTCTTCCTAGAGCCATaGGAGTTTTCTGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTFFLEP*EFSVSM
Trigger: CATGCTGACAGAAAACTCCCATGGCTCTAGGAAGAA...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR TCA 90 bp AGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTATTTCCCTGAAAGGGTaGCATACTTCACTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RAFVLKLRVEAGLDVVICISLKG*HTSLLD
Trigger: GTCAAGAAGTGAAGTATGTCACCCTTTCAGGGAAAT...ACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR TCA 90 bp ACTGATTGTGGGCTATTAAAGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTAGAACAGAACACTaGTTGTGGGCTATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TDCGLLKEFLISYGTRFPARTEH*LWAIKG
Trigger: TCCTTTAATAGCCCACAATCAGTGTTCTGTTCTAGC...TGGGAATCTGGTGCCATAACTAATGAGAAACTCCTTTAATAGCCCACAATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp CACATAAAGAAAGGTGTTGGCTTAGTGTCACTTCTTCCTAGAGCCATGGGAGTTTCCTTAAAAATGGACTaGAAATCTGGATCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: HIKKGVGLVSLLPRAMGVSLKMD*KSGSVS
Trigger: TGACACTGATCCAGATTTGCAGTCCATTTTTAAGGA...AACTCCCATGGCTCTAGGAAGAAGTGACACTAAGCCAACACCTTTCTTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR GCA 90 bp TCAGACTCTTACTTACTCTTTTGGTTCACACTAATTAGCATTCATTTTCCAGAGCTGCTAAGAAATGAGTaGCCCTGGCATGAAGACGTC +
Preference number: 4 (lower is better)
Translates to: SDSYLLFWFTLISIHFPELLRNE*PWHEDV
Trigger: GACGTCTTCATGCCAGGGGCACTCATTTCTTAGCAG...CTCTGGAAAATGAATGCTAATTAGTGTGAACCAAAAGAGTAAGTAAGAGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CCA 90 bp CCCTCCTATTTCAGTAATTGCCTGAATTTCCCTGAAAGGGTGACATACTTCACTAAAAATTTGACCTCTTaGAGCACAGAGACTAAGTAT +
Preference number: 4 (lower is better)
Translates to: PSYFSNCLNFPERVTYFTKNLTS*STETKY
Trigger: ATACTTAGTCTCTGTGCTCCAAGAGGTCAAATTTTT...AGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp CGCAGCGGCGCGTGCTGCGGATGCTCCCGGGCGAACAGCCAGTACTaGCGGGCCAGCTCCCGGGCCGCCGCTACGGCGTGCAACTCACAG +
Preference number: 5 (lower is better)
Translates to: RSGACCGCSRANSQY*RASSRAAATACNSQ
Trigger: CTGTGAGTTGCACGCCGTAGCGGCGGCCCGGGAGCTGGCCCGCCAGTACTGGCTGTTCGCCCGGGAGCATCCGCAGCACGCGCCGCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp GGCGCAGCGCCAGCCTCCCGCGCTGCCAGCGTGCCCCGCTGTCCATaGAGGCCTCGTCGGCCAGGCTGTAGCGCAGCACCGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GAAPASRAASVPRCP*RPRRPGCSAAPPPS
Trigger: TGAAGGAGGCGGTGCTGCGCTACAGCCTGGCCGACGAGGCCTCCATGGACAGCGGGGCACGCTGGCAGCGCGGGAGGCTGGCGCTGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000550925.2
CDS GCA 90 bp GCGCCTCATCATTTCCGCCGCCAGCGCTTGACAGTTGCGGGAGGATaGGCCCCCGGGCCGCCGCCGCCGGGGAAACTTTGCAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: APHHFRRQRLTVAGG*APGPPPPGKLCSGR
Trigger: GCGGCCGCTGCAAAGTTTCCCCGGCGGCGGCGGCCCGGGGGCGCATCCTCCCGCAACTGTCAAGCGCTGGCGGCGGAAATGATGAGGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp AGGGCGCGGAAGAGGGCGAGGAGGGCTGCAGGGCAGGCCCGTTCATaGCGGAGACCCAGGTGGTGCGGCCGGGCTGAGAGACAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RARKRARRAAGQARS*RRPRWCGRAERQEL
Trigger: GAGCTCCTGTCTCTCAGCCCGGCCGCACCACCTGGGTCTCCGCCATGAACGGGCCTGCCCTGCAGCCCTCCTCGCCCTCTTCCGCGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp CAGGCGGCGCCGCACTCGAGTGGGATGGGCGAGCGCTGGAAGTGGTaGAGCATGTCCACGACCGAGGGAAAGTGGAGGTGCTGCACACGG +
Preference number: 5 (lower is better)
Translates to: QAAPHSSGMGERWKW*SMSTTEGKWRCCTR
Trigger: CCGTGTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 90 bp CGCTGGAAGTGGTGGAGCATGTCCACGACCGAGGGAAAGTGGAGGTaGTGCACACGGCACTGGCCCCGCTCTGTCAGCGACAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RWKWWSMSTTEGKWR*CTRHWPRSVSDRRR
Trigger: CCTGCGCCTGTCGCTGACAGAGCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp GGCTCGCTCGAGCGGGGCTCAGGCAGGAAACCCGGGCTCGGAAAATaGCCAGCGCCTCATCATTTCCGCCGCCAGCGCTTGACAGTTGCG +
Preference number: 5 (lower is better)
Translates to: GSLERGSGRKPGLGK*PAPHHFRRQRLTVA
Trigger: CGCAACTGTCAAGCGCTGGCGGCGGAAATGATGAGGCGCTGGCCATTTTCCGAGCCCGGGTTTCCTGCCTGAGCCCCGCTCGAGCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp GGCGAGCGCTGGAAGTGGTGGAGCATGTCCACGACCGAGGGAAAGTaGAGGTGCTGCACACGGCACTGGCCCCGCTCTGTCAGCGACAGG +
Preference number: 5 (lower is better)
Translates to: GERWKWWSMSTTEGK*RCCTRHWPRSVSDR
Trigger: CCTGTCGCTGACAGAGCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp CGGACATCACAGGCGGCGCCGCACTCGAGTGGGATGGGCGAGCGCTaGAAGTGGTGGAGCATGTCCACGACCGAGGGAAAGTGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RTSQAAPHSSGMGER*KWWSMSTTEGKWRC
Trigger: GCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp AGCTGGAGAGCCGGACATCACAGGCGGCGCCGCACTCGAGTGGGATaGGCGAGCGCTGGAAGTGGTGGAGCATGTCCACGACCGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SWRAGHHRRRRTRVG*ASAGSGGACPRPRE
Trigger: TTCCCTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp CACGTAGCTGGAGAGCCGGACATCACAGGCGGCGCCGCACTCGAGTaGGATGGGCGAGCGCTGGAAGTGGTGGAGCATGTCCACGACCGA +
Preference number: 5 (lower is better)
Translates to: HVAGEPDITGGAALE*DGRALEVVEHVHDR
Trigger: TCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCCAGCTACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp TCACAGGCGGCGCCGCACTCGAGTGGGATGGGCGAGCGCTGGAAGTaGTGGAGCATGTCCACGACCGAGGGAAAGTGGAGGTGCTGCACA +
Preference number: 5 (lower is better)
Translates to: SQAAPHSSGMGERWK*WSMSTTEGKWRCCT
Trigger: TGTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 90 bp CCAGCCAGGTTGCAGCGTGTGGGCACATGGGCGCAGGACAACCCCTaGTTCAGTCGAAACCTCAGCCTGGACAGCTCAGGCTCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: PARLQRVGTWAQDNP*FSRNLSLDSSGSGH
Trigger: GTGGCCAGAGCCTGAGCTGTCCAGGCTGAGGTTTCGACTGAAGCAGGGGTTGTCCTGCGCCCATGTGCCCACACGCTGCAACCTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550925.2
CDS CCA 90 bp CCGTGTTGCAGGAACCTGGTGGTTGGGAGACGACTACCACGTAGCTaGAGAGCCGGACATCACAGGCGGCGCCGCACTCGAGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PCCRNLVVGRRLPRS*RAGHHRRRRTRVGW
Trigger: CCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCCAGCTACGTGGTAGTCGTCTCCCAACCACCAGGTTCCTGCAACACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp CCCGGGCTCGATTCACAGGCTCATGCTCCAGGTGCTGCAGGCTGTTaGCCAGTTCTTCGGGCGAAGGCACCAGGTGGAAGATCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: PGLDSQAHAPGAAGC*PVLRAKAPGGRSAR
Trigger: CCGAGCAGATCTTCCACCTGGTGCCTTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCCTGTGAATCGAGCCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp CACAGCAGACCTGCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGGCCGCCGGGGAAACTTaGCAGCGGCCGCCGTCGCCA +
Preference number: 5 (lower is better)
Translates to: HSRPAMWTDGRWENRLLVAAGET*QRPPSP
Trigger: TGGCGACGGCGGCCGCTGCAAAGTTTCCCCGGCGGC...CACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp TGTCCTATGCCAGAGGCTCCAGCCAGGTTGCAGCGTGTGGGCACATaGGCGCAGGACAACCCCTGCTTCAGTCGAAACCTCAGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: CPMPEAPARLQRVGT*AQDNPCFSRNLSLD
Trigger: GTCCAGGCTGAGGTTTCGACTGAAGCAGGGGTTGTCCTGCGCCCATGTGCCCACACGCTGCAACCTGGCTGGAGCCTCTGGCATAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550925.2
CDS GCA 90 bp GAACACTCCATGAGCATCAGGGCCCTGCAGCTGAACCAGCTGAGCTaGTTTCACTCTGGAGATGGGGCCGTGGAACCAGGGGTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: EHSMSIRALQLNQLS*FHSGDGAVEPGVAG
Trigger: TCCTGCTACCCCTGGTTCCACGGCCCCATCTCCAGAGTGAAAGCAGCTCAGCTGGTTCAGCTGCAGGGCCCTGATGCTCATGGAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GCAGGTGACTGTCCCGAGGATGCAGTAGACAAGCCAGCATGCTGGCTCAGACTGGGGAAGAGGACCGTGTaGCAGGAACCTGGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: AGDCPEDAVDKPACWLRLGKRTV*QEPGGW
Trigger: CCAACCACCAGGTTCCTGCAACACGGTCCTCTTCCC...CAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS TCA 90 bp AGGTGTGTACTGATTGTCTATGGCCCGCAGGTGGCTCCGGGAGGATaGGTCCATTTCGTAGTCCGAGTCCCGGGCTCGATTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: RCVLIVYGPQVAPGG*VHFVVRVPGSIHRL
Trigger: GAGCCTGTGAATCGAGCCCGGGACTCGGACTACGAAATGGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGACAATCAGTACACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp TGTCAGGCATCTCAAGCCGTGTGCACCACCGGACCTCCTGGATGCTaGAGCAAGCTGCTTGTAGCTTGGGCCTTGAACTCTTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: CQASQAVCTTGPPGC*SKLLVAWALNSWVG
Trigger: ACCCACCCAAGAGTTCAAGGCCCAAGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS TCA 90 bp GCTCTCCAGCCCTCGGCCTGTGCACTCCGAGAGCTCAGCCATCCATaGATTCAGCTGCTGCTCGTCTCCCACCTCAAAGATGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: ALQPSACALRELSHP*IQLLLVSHLKDDVC
Trigger: ACAGACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCACAGGCCGAGGGCTGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 90 bp CGGCCTGTGCACTCCGAGAGCTCAGCCATCCATGAATTCAGCTGCTaGTCGTCTCCCACCTCAAAGATGATGTCTGTCCGGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: RPVHSESSAIHEFSC*SSPTSKMMSVRSFT
Trigger: GGTGAAGGACCGGACAGACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCACAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 90 bp CCTCGGCCTGTGCACTCCGAGAGCTCAGCCATCCATGAATTCAGCTaGTGCTCGTCTCCCACCTCAAAGATGATGTCTGTCCGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRPVHSESSAIHEFS*CSSPTSKMMSVRSF
Trigger: GAAGGACCGGACAGACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCACAGGCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp GCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGAATTCCTCACTaGTCAGAGAGGTGTGTACTGATTGTCTATGGCCCGCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: ACAPQGQLLRPGIPH*SERCVLIVYGPQVA
Trigger: AGCCACCTGCGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACCAGGGCAGGAACTTCTaGGCCAGGCCAGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDQGRNF*ARPGRA
Trigger: CGCCCGGCCTGGCCTGGCCAAGAAGTTCCTGCCCTG...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTAGGTGCTGCAGGCTGTaGGCCAGTTCTTCGGGCGAA +
Preference number: 5 (lower is better)
Translates to: HRDPGQELAASSNKNYICRCCRL*ASSSGE
Trigger: TTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCT...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GCAGGTGACTGTCCCGAGGATGCAGTAGACAAGCCAGCATGCTGGCTCAGACTGTCGAGGCAGAATCGCTaGAACCAGGAAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AGDCPEDAVDKPACWLRLSRQNR*NQEGGG
Trigger: ACCTCCACCTTCCTGGTTCAAGCGATTCTGCCTCGA...CAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 90 bp GCCTGGAATTCCTCACTGGTCAGAGAGGTGTGTACTGATTGTCTATaGCCCGCAGGTGGCTCCGGGAGGATGAGTCCATTTCGTAGTCCG +
Preference number: 5 (lower is better)
Translates to: AWNSSLVREVCTDCL*PAGGSGRMSPFRSP
Trigger: CGGACTACGAAATGGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGAATTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 90 bp TGTCAGGCATCTCAAGCCGTGTGCACCACCGGACCTCCTGGATGCTaGAGCAAGCTGCTTGTAGCTTGGGCCTTGAACTCTTCGAAGAAC +
Preference number: 5 (lower is better)
Translates to: CQASQAVCTTGPPGC*SKLLVAWALNSSKN
Trigger: GTTCTTCGAAGAGTTCAAGGCCCAAGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR CAA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGTTGGGCCTTGAACTCTaGGGTGGGTCGAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHELGLEL*GGSKSS
Trigger: GGAGCTCTTCGACCCACCCAAGAGTTCAAGGCCCAA...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS GCA 90 bp CCTTCAGCACAAAGGTGTAAAGGTTGTCAGGCATCTCAAGCCGTGTaGACCACCGGACCTCCTGGATGCTGGAGCAAGCTGCTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PSAQRCKGCQASQAV*TTGPPGCWSKLLVA
Trigger: AGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACAACCTTTACACCTTTGTGCTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp ACTTGGACGGGAAGCAGTCTGGAGGTGGGTGCCTTCCAAATCTCTGCCACAGAACTTGTAGCTTGGGCCTaGAACTCTTGGGTGGGTCGA +
Preference number: 5 (lower is better)
Translates to: TWTGSSLEVGAFQISATELVAWA*NSWVGR
Trigger: TCGACCCACCCAAGAGTTCAAGGCCCAAGCTACAAG...TTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp TTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGGCCTGGCCCAGGAGAAGCACCTaGGTTAAGGGAATCTGTGCT +
Preference number: 5 (lower is better)
Translates to: FTSSHFCLCSSRAAVEAWPRRST*VKGICA
Trigger: AGCACAGATTCCCTTAACCAAGGTGCTTCTCCTGGG...CCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GCTGACTCCACTGTCACTGCCCCCGTTTCTGAGCCTCCAGACAGGTTCTGGGAGACCAAGCCAGCCTTGTaGCTGAAGGATTTACTAGAA +
Preference number: 5 (lower is better)
Translates to: ADSTVTAPVSEPPDRFWETKPAL*LKDLLE
Trigger: TTCTAGTAAATCCTTCAGCAACAAGGCTGGCTTGGT...CTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp CAGGAGGGCCCTTCAACAGGCCTAATAGAAGGGTCACTTCCAAACTGGCACGAGTCAGAGCTGCTAAGTTaGCTCTACCTGGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: QEGPSTGLIEGSLPNWHESELLS*LYLVCL
Trigger: GAGGCACACCAGGTAGAGCAAACTTAGCAGCTCTGA...CTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGAGCAGGAACCTGGTGGTaGGGAGACGACTACCACGTA +
Preference number: 5 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRAGTWW*GDDYHV
Trigger: TACGTGGTAGTCGTCTCCCAACCACCAGGTTCCTGC...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTCAAGGGCAGCTGTaGAGGCCTGGAATTCCTCAC +
Preference number: 5 (lower is better)
Translates to: AESRSRIRCGHLWCGHSRPQGQL*RPGIPH
Trigger: GTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGG...TCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GCAGGTGACTGTCCCGAGGATGCAGTAGACAAGCCAGCATGCTGGCTCAGACTGTGTATAGATAGAGATTaGACTTCAGGACCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: AGDCPEDAVDKPACWLRLCIDRD*TSGPPW
Trigger: CCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA...CAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp CATAGGGACCCCGGGCAGGAGCTAGCGGCATCCTCTAACAAGAACTACATCTGTAAAGTGCATAGGGGTTaGTTCCCCCACCCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: HRDPGQELAASSNKNYICKVHRG*FPHPLK
Trigger: TTTCAGAGGGTGGGGGAACAAACCCCTATGCACTTT...ACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp AGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTTTCCGCCGCCAGCGCTaGACAGTTGCGGGAGGATGC +
Preference number: 5 (lower is better)
Translates to: RAFVLKLRVEAGLDVVICFRRQR*TVAGGC
Trigger: GCATCCTCCCGCAACTGTCAAGCGCTGGCGGCGGAA...ACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp GCCTCTGACAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGCCTCAAGGGCAGCTGTaGAGGCCTGGAATTCCTCAC +
Preference number: 5 (lower is better)
Translates to: ASDRAFVLKLRVEAGLDVPQGQL*RPGIPH
Trigger: GTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGG...CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACAGCTGTCCTGGTAACTaGGACGGGAAGCAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDSCPGN*DGKQSG
Trigger: TCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCT...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAAGGGAAGAGGACCGTGTaGCAGGAACCTGGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKGKRTV*QEPGGW
Trigger: CCAACCACCAGGTTCCTGCAACACGGTCCTCTTCCC...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp CAATTACATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTGAGATGGGAGAACCGCTaGTTAGTGTTCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QLHSQVHTSACAPQGQLLRWENR*LVFWAS
Trigger: GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCT...CAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATCCTGGATGGTGGAGATaGTGTGTGCCCATGTGTGCA +
Preference number: 5 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNPGWWR*CVPMCA
Trigger: TGCACACATGGGCACACACAATCTCCACCATCCAGG...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS GCA 90 bp AGGAAGGAAAGATCAATTACATTCACAAGTTCACACTTCTGCCTGTaGTCCTCAAGGGCAGCTGTTGAGGCCTGGAATTCCTCACTGGTC +
Preference number: 5 (lower is better)
Translates to: RKERSITFTSSHFCL*SSRAAVEAWNSSLV
Trigger: GACCAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTAGATGGGAGAACCGCTaGTTAGTGTTCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSRWENR*LVFWAS
Trigger: GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCT...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp TTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTGTCCCGAGGATGCAGTAGACATACTTCACTTCTaGACATTTAGGAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: FRKDSGHSVAGDCPEDAVDILHF*TFRKDS
Trigger: ACTGTCCTTCCTAAATGTCAAGAAGTGAAGTATGTC...TACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp CACATAAAGAAAGGTGTTGGCTTAGTGTCACTTCTTCCTAGAGCCATGGGAGTTTACCTGGTGTGCCTCTaGGCACCACCTGAGAGATGT +
Preference number: 5 (lower is better)
Translates to: HIKKGVGLVSLLPRAMGVYLVCL*APPERC
Trigger: ACATCTCTCAGGTGGTGCCAAGAGGCACACCAGGTA...AACTCCCATGGCTCTAGGAAGAAGTGACACTAAGCCAACACCTTTCTTTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp ACTGATTGTGGGCTATTAAAGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCAGGAACCTGGTGGTaGGGAGACGACTACCACGTA +
Preference number: 5 (lower is better)
Translates to: TDCGLLKEFLISYGTRFPAGTWW*GDDYHV
Trigger: TACGTGGTAGTCGTCTCCCAACCACCAGGTTCCTGC...TGGGAATCTGGTGCCATAACTAATGAGAAACTCCTTTAATAGCCCACAATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp GCCATGTGGACTGACGGTAGATGGGAGAACCGCTTGTTAGTGTTCTGGGCTTCCTGTTTTAAATCATTTTaGACCTTCAGCTTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: AMWTDGRWENRLLVFWASCFKSF*TFSLCL
Trigger: GAGGCACAAGCTGAAGGTCAAAAATGATTTAAAACA...GGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp AGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACACAGCAGACCTGAGGATAGAACTGTTCTaGCCACCCTCCTATTTCAGT +
Preference number: 5 (lower is better)
Translates to: RVEAGLDVVICGVDTADLRIELF*PPSYFS
Trigger: ACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCT...CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp GGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGTAATTGCCTGAATTGTAATCCCAGCTACTaGAGAGGTCGAGGCAGAATC +
Preference number: 5 (lower is better)
Translates to: GTRIELFLPPSYFSNCLNCNPSY*RGRGRI
Trigger: GATTCTGCCTCGACCTCTCAAGTAGCTGGGATTACA...ATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp AGGAGTTTCTCATTAGTTATGGCACCAGATTCCCAGCTTCCATTTTGGCTCAAACCCAGGAGAAGCACCTaGGTTAAGGGAATCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RSFSLVMAPDSQLPFWLKPRRST*VKGICA
Trigger: AGCACAGATTCCCTTAACCAAGGTGCTTCTCCTGGG...TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTCTGTCAGCATGTTTTaGAGCTGTCCTGGTAACTTG +
Preference number: 5 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDSVSMF*SCPGNL
Trigger: CAAGTTACCAGGACAGCTCAAAAACATGCTGACAGA...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp GCCTCTGACAGAGCTTTTGTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGCTTGTAGCTTGGGCCTaGAACTCTTCGAAGAACGAT +
Preference number: 5 (lower is better)
Translates to: ASDRAFVLKLRVEAGLDVLVAWA*NSSKND
Trigger: ATCGTTCTTCGAAGAGTTCAAGGCCCAAGCTACAAG...CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538307.1
CDS-3UTR CAA 90 bp TCAGACTCTTACTTACTCTTTTGGTTCACACTAATTAGCATTCATTTTCCAGAGAGGTGCTGCAGGCTGTaGGCCAGTTCTTCGGGCGAA +
Preference number: 5 (lower is better)
Translates to: SDSYLLFWFTLISIHFPERCCRL*ASSSGE
Trigger: TTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCT...CTCTGGAAAATGAATGCTAATTAGTGTGAACCAAAAGAGTAAGTAAGAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp ATACTTCACTTCTTGACATTTAGGAAGGACAGTGGCCACTCAGTGGCAGGTGACTCTAGAAGCAAAAATTaGACCTCTTGGAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: ILHFLTFRKDSGHSVAGDSRSKN*TSWSTE
Trigger: CTCTGTGCTCCAAGAGGTCAAATTTTTGCTTCTAGA...GTCACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp GTCCTAAAGCTGAGAGTAGAAGCAGGATTAGATGTGGTCATCTGTGGTGTGGACGAGCCTAAAACCCACTaGTGGGATAATTTAATAAGC +
Preference number: 5 (lower is better)
Translates to: VLKLRVEAGLDVVICGVDEPKTH*WDNLIS
Trigger: GCTTATTAAATTATCCCACAAGTGGGTTTTAGGCTC...GTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS-3UTR CAA 90 bp GGGTCACTTCCAAACTGGCACGAGCAGTTAACAGTGTCCCTTAAATCTTTCTCTGACATACTTCACTTCTaGACATTTAGGAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: GSLPNWHEQLTVSLKSFSDILHF*TFRKDS
Trigger: ACTGTCCTTCCTAAATGTCAAGAAGTGAAGTATGTC...AGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp TTTTTATTCGTAAGGCACCAGGATAGAACTGTTCTTGCCACCCTCCTATTTCAGAGGATAGAACTGTTCTaGCCACCCTCCTATTTCAGT +
Preference number: 5 (lower is better)
Translates to: FLFVRHQDRTVLATLLFQRIELF*PPSYFS
Trigger: ACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCT...CTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS-3UTR CAA 90 bp TGTATAGATAGAGATTTGACTTCAGGACCTCCCTGGATGGTGGAGATTGTGTGTGGGAGGGAACTTAATTaGGTTCATTATCTACTGGGT +
Preference number: 5 (lower is better)
Translates to: CIDRDLTSGPPWMVEIVCGRELN*VHYLLG
Trigger: ACCCAGTAGATAATGAACCAAATTAAGTTCCCTCCC...ACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CAA 90 bp AGTTGCGGGAGGATGCGCCCCCGGGCCGCCGCCGCCGGGGAAACTTaGCAGCGGCCGCCGTCGCCACCGCGGGCCGCGACAGTCCGGGCG +
Preference number: 6 (lower is better)
Translates to: SCGRMRPRAAAAGET*QRPPSPPRAATVRA
Trigger: CGCCCGGACTGTCGCGGCCCGCGGTGGCGACGGCGGCCGCTGCAAAGTTTCCCCGGCGGCGGCGGCCCGGGGGCGCATCCTCCCGCAACT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 72 bp GCGTGCTGCGGATGCTCCCGGGCGAACAGCCAGTACTaGCGGGCCAGCTCCCGGGCCGCCGCTACGGCGTGC +
Preference number: 6 (lower is better)
Translates to: ACCGCSRANSQY*RASSRAAATAC
Trigger: GCACGCCGTAGCGGCGGCCCGGGAGCTGGCCCGCCAGTACTGGCTGTTCGCCCGGGAGCATCCGCAGCACGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS GCA 72 bp GACACCAGCTCGGCGCGCAGCGGCGCGTGCTGCGGATaGTCCCGGGCGAACAGCCAGTACTGGCGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: DTSSARSGACCG*SRANSQYWRAS
Trigger: GCTGGCCCGCCAGTACTGGCTGTTCGCCCGGGAGCATCCGCAGCACGCGCCGCTGCGCGCCGAGCTGGTGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 72 bp CCAGCCTCCCGCGCTGCCAGCGTGCCCCGCTGTCCATaGAGGCCTCGTCGGCCAGGCTGTAGCGCAGCACCG +
Preference number: 6 (lower is better)
Translates to: PASRAASVPRCP*RPRRPGCSAAP
Trigger: CGGTGCTGCGCTACAGCCTGGCCGACGAGGCCTCCATGGACAGCGGGGCACGCTGGCAGCGCGGGAGGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000550925.2
CDS GCA 72 bp CATTTCCGCCGCCAGCGCTTGACAGTTGCGGGAGGATaGGCCCCCGGGCCGCCGCCGCCGGGGAAACTTTGC +
Preference number: 6 (lower is better)
Translates to: HFRRQRLTVAGG*APGPPPPGKLC
Trigger: GCAAAGTTTCCCCGGCGGCGGCGGCCCGGGGGCGCATCCTCCCGCAACTGTCAAGCGCTGGCGGCGGAAATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 72 bp GCTGCAGGGCAGGCCCGTTCATGGCGGAGACCCAGGTaGTGCGGCCGGGCTGAGAGACAGGAGCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AAGQARSWRRPR*CGRAERQELWA
Trigger: GGCCCAGAGCTCCTGTCTCTCAGCCCGGCCGCACCACCTGGGTCTCCGCCATGAACGGGCCTGCCCTGCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CAA 72 bp AAATGGCCAGCGCCTCATCATTTCCGCCGCCAGCGCTaGACAGTTGCGGGAGGATGCGCCCCCGGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: KWPAPHHFRRQR*TVAGGCAPGPP
Trigger: CGGCGGCCCGGGGGCGCATCCTCCCGCAACTGTCAAGCGCTGGCGGCGGAAATGATGAGGCGCTGGCCATTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341259.7
CDS CCA 72 bp GCCGGACATCACAGGCGGCGCCGCACTCGAGTGGGATaGGCGAGCGCTGGAAGTGGTGGAGCATGTCCACGA +
Preference number: 6 (lower is better)
Translates to: AGHHRRRRTRVG*ASAGSGGACPR
Trigger: TCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp GGAGAGCCGGACATCACAGGCGGCGCCGCACTCGAGTaGGATGGGCGAGCGCTGGAAGTGGTGGAGCATGTC +
Preference number: 6 (lower is better)
Translates to: GEPDITGGAALE*DGRALEVVEHV
Trigger: GACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 72 bp TCCCGGGCTCGATTCACAGGCTCATGCTCCAGGTGCTaGAGGCTGTTGGCCAGTTCTTCGGGCGAAGGCACC +
Preference number: 6 (lower is better)
Translates to: SRARFTGSCSRC*RLLASSSGEGT
Trigger: GGTGCCTTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 72 bp GAGTCCCGGGCTCGATTCACAGGCTCATGCTCCAGGTaGTGCAGGCTGTTGGCCAGTTCTTCGGGCGAAGGC +
Preference number: 6 (lower is better)
Translates to: ESRARFTGSCSR*CRLLASSSGEG
Trigger: GCCTTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp TGGAAGTGGTGGAGCATGTCCACGACCGAGGGAAAGTaGAGGTGCTGCACACGGCACTGGCCCCGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: WKWWSMSTTEGK*RCCTRHWPRSV
Trigger: GACAGAGCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp AGGAACCTGGTGGTTGGGAGACGACTACCACGTAGCTaGAGAGCCGGACATCACAGGCGGCGCCGCACTCGA +
Preference number: 6 (lower is better)
Translates to: RNLVVGRRLPRS*RAGHHRRRRTR
Trigger: TCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCCAGCTACGTGGTAGTCGTCTCCCAACCACCAGGTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp CCAGAGGCTCCAGCCAGGTTGCAGCGTGTGGGCACATaGGCGCAGGACAACCCCTGCTTCAGTCGAAACCTC +
Preference number: 6 (lower is better)
Translates to: PEAPARLQRVGT*AQDNPCFSRNL
Trigger: GAGGTTTCGACTGAAGCAGGGGTTGTCCTGCGCCCATGTGCCCACACGCTGCAACCTGGCTGGAGCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550925.2
CDS CCA 72 bp GTCCTATGCCAGAGGCTCCAGCCAGGTTGCAGCGTGTaGGCACATGGGCGCAGGACAACCCCTGCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: VLCQRLQPGCSV*AHGRRTTPASV
Trigger: GACTGAAGCAGGGGTTGTCCTGCGCCCATGTGCCCACACGCTGCAACCTGGCTGGAGCCTCTGGCATAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550925.2
CDS GCA 72 bp TTGCAGCGTGTGGGCACATGGGCGCAGGACAACCCCTaGTTCAGTCGAAACCTCAGCCTGGACAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: LQRVGTWAQDNP*FSRNLSLDSSG
Trigger: GCCTGAGCTGTCCAGGCTGAGGTTTCGACTGAAGCAGGGGTTGTCCTGCGCCCATGTGCCCACACGCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550925.2
CDS CCA 72 bp CGCAGGACAACCCCTGCTTCAGTCGAAACCTCAGCCTaGACAGCTCAGGCTCTGGCCACTTGGGTGGGTCGA +
Preference number: 6 (lower is better)
Translates to: RRTTPASVETSA*TAQALATWVGR
Trigger: TCGACCCACCCAAGTGGCCAGAGCCTGAGCTGTCCAGGCTGAGGTTTCGACTGAAGCAGGGGTTGTCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550925.2
CDS GCA 72 bp ATGAGCATCAGGGCCCTGCAGCTGAACCAGCTGAGCTaGTTTCACTCTGGAGATGGGGCCGTGGAACCAGGG +
Preference number: 6 (lower is better)
Translates to: MSIRALQLNQLS*FHSGDGAVEPG
Trigger: CCCTGGTTCCACGGCCCCATCTCCAGAGTGAAAGCAGCTCAGCTGGTTCAGCTGCAGGGCCCTGATGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS TCA 72 bp CTGATTGTCTATGGCCCGCAGGTGGCTCCGGGAGGATaGGTCCATTTCGTAGTCCGAGTCCCGGGCTCGATT +
Preference number: 6 (lower is better)
Translates to: LIVYGPQVAPGG*VHFVVRVPGSI
Trigger: AATCGAGCCCGGGACTCGGACTACGAAATGGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGACAATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp GATTCACAGGCTCATGCTCCAGGTGCTGCAGGCTGTTaGCCAGTTCTTCGGGCGAAGGCACCAGGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: DSQAHAPGAAGC*PVLRAKAPGGR
Trigger: TCTTCCACCTGGTGCCTTCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCCTGTGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS TCA 72 bp CCCTCGGCCTGTGCACTCCGAGAGCTCAGCCATCCATaGATTCAGCTGCTGCTCGTCTCCCACCTCAAAGAT +
Preference number: 6 (lower is better)
Translates to: PSACALRELSHP*IQLLLVSHLKD
Trigger: ATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCACAGGCCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS TCA 72 bp GGCCTGGAATTCCTCACTGGTCAGAGAGGTGTGTACTaGTTGTCTATGGCCCGCAGGTGGCTCCGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GLEFLTGQRGVY*LSMARRWLRED
Trigger: ATCCTCCCGGAGCCACCTGCGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGAATTCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp TCTCAAGCCGTGTGCACCACCGGACCTCCTGGATGCTaGAGCAAGCTGCTTGTAGCTTGGGCCTTGAACTCT +
Preference number: 6 (lower is better)
Translates to: SQAVCTTGPPGC*SKLLVAWALNS
Trigger: AGAGTTCAAGGCCCAAGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTGCACACGGCTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS TCA 72 bp TTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTTaGGGCCTGGAATTCCTCACTGGTCAGAGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: FTLLPVLLKGSC*GLEFLTGQRGV
Trigger: CACACCTCTCTGACCAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 72 bp CACTCCGAGAGCTCAGCCATCCATGAATTCAGCTGCTaGTCGTCTCCCACCTCAAAGATGATGTCTGTCCGG +
Preference number: 6 (lower is better)
Translates to: HSESSAIHEFSC*SSPTSKMMSVR
Trigger: CCGGACAGACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp TCCTCACTGGTCAGAGAGGTGTGTACTGATTGTCTATaGCCCGCAGGTGGCTCCGGGAGGATGAGTCCATTT +
Preference number: 6 (lower is better)
Translates to: SSLVREVCTDCL*PAGGSGRMSPF
Trigger: AAATGGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp CCTCAAGGGCAGCTGTTGAGGCCTGGAATTCCTCACTaGTCAGAGAGGTGTGTACTGATTGTCTATGGCCCG +
Preference number: 6 (lower is better)
Translates to: PQGQLLRPGIPH*SERCVLIVYGP
Trigger: CGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS GCA 72 bp GTGCACTCCGAGAGCTCAGCCATCCATGAATTCAGCTaGTGCTCGTCTCCCACCTCAAAGATGATGTCTGTC +
Preference number: 6 (lower is better)
Translates to: VHSESSAIHEFS*CSSPTSKMMSV
Trigger: GACAGACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CAA 90 bp CATTCACAAGTTCACACTTCTGCCTGTGCTCCTCAAGGGCAGCTGTaGAGGCCTGGAATTCCTCACTGGTCAGAGAGGTGTGTACTGATT +
Preference number: 6 (lower is better)
Translates to: HSQVHTSACAPQGQL*RPGIPHWSERCVLI
Trigger: AATCAGTACACACCTCTCTGACCAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS TCA 72 bp ATGAATTCAGCTGCTGCTCGTCTCCCACCTCAAAGATaGTGTCTGTCCGGTCCTTCACCTTCAGCACAAAGG +
Preference number: 6 (lower is better)
Translates to: MNSAAARLPPQR*CLSGPSPSAQR
Trigger: CCTTTGTGCTGAAGGTGAAGGACCGGACAGACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341259.7
ENST00000538307.1
CDS CCA 72 bp GGACCTCCTGGATGCTGGAGCAAGCTGCTTGTAGCTTaGGCCTTGAACTCTTCGAAGAACGATGATTCAGAA +
Preference number: 6 (lower is better)
Translates to: GPPGCWSKLLVA*ALNSSKNDDSE
Trigger: TTCTGAATCATCGTTCTTCGAAGAGTTCAAGGCCCAAGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538307.1