RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SGSM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141258

Ensembl transcript IDs: ENST00000268989.8, ENST00000426855.6, ENST00000570431.1, ENST00000572841.1, ENST00000572875.1, ENST00000572925.1, ENST00000573062.5, ENST00000573717.2, ENST00000573851.1, ENST00000574250.1, ENST00000574563.5, ENST00000574650.1, ENST00000574857.1, ENST00000575367.1

Found 992 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGAGGCTGACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTaGCCCCTGACTTGCCCTGCAGGGTCAGCACTGCCGGGAGTCGGA +
Preference number: 1 (lower is better)
Translates to: PEADPSHPGPDPRAS*PLTCPAGSALPGVG
Trigger: TCCGACTCCCGGCAGTGCTGACCCTGCAGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTCAGCCTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR TCA 90 bp CCTGAAGGCGGCCCGGGTCTCCCGTGCCCGGGTCTCCCGCACCCGTaGCGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: PEGGPGLPCPGLPHP*RVPKPEAVLVAPAG
Trigger: CCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCGGGAGACCCGGGCACGGGAGACCCGGGCCGCCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 90 bp GGGGGTCACCTCAGGTGGCCAAAGGCAGTGGCAGTGCTGCTGAAGTaGGCTGCTCCCACCCAGGGCCCACATCTTCCGACTGCCCCAGAA +
Preference number: 1 (lower is better)
Translates to: GGHLRWPKAVAVLLK*AAPTQGPHLPTAPE
Trigger: TTCTGGGGCAGTCGGAAGATGTGGGCCCTGGGTGGGAGCAGCCCACTTCAGCAGCACTGCCACTGCCTTTGGCCACCTGAGGTGACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR GCA 90 bp GGGGGCAGGGCTGGGCTGGGCAGGCTGTGCTGGGTGCAGAAGGGCTaGGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAG +
Preference number: 1 (lower is better)
Translates to: GGRAGLGRLCWVQKG*GALCHVSQMQKVCQ
Trigger: CTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCCTTCTGCACCCAGCACAGCCTGCCCAGCCCAGCCCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 90 bp GGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTaGGGTAGAGGAGGAAGTGGGGATGGCCGAGCAAGCAGCATGCCT +
Preference number: 1 (lower is better)
Translates to: GQGLHVPGQGLACMC*GRGGSGDGRASSMP
Trigger: AGGCATGCTGCTTGCTCGGCCATCCCCACTTCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
3UTR CCA 90 bp GCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATaGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTGCCC +
Preference number: 1 (lower is better)
Translates to: ATRAWWRPRTHGQQG*TMGWSGPQTGCAVP
Trigger: GGGCACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR GCA 90 bp GCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATaGATCCCCTGCCTCCCGCAGTCTCAGGGACATGGCAGATGTCTG +
Preference number: 1 (lower is better)
Translates to: AELALLLTRDRWGHP*IPCLPQSQGHGRCL
Trigger: CAGACATCTGCCATGTCCCTGAGACTGCGGGAGGCAGGGGATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR TCA 90 bp TGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCTaGGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTG +
Preference number: 1 (lower is better)
Translates to: CLRQIMGCPRTEACL*GEAVTGFFPDRVTL
Trigger: CAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR TCA 90 bp GGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTaGGGCCTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGA +
Preference number: 1 (lower is better)
Translates to: GTWQMSATDNGLPSN*GLSLRGGCDRILPR
Trigger: TCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR GCA 90 bp TTGGTTGCTCCAGCTGGGGCTGGTGCACGCACAATATACTGGGACTaGAAAGGGACCCTCAGAAGGGACACAGCACAGAGCCTCTCGCCC +
Preference number: 1 (lower is better)
Translates to: LVAPAGAGARTIYWD*KGTLRRDTAQSLSP
Trigger: GGGCGAGAGGCTCTGTGCTGTGTCCCTTCTGAGGGTCCCTTTGCAGTCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 90 bp GCTGTACAGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTaGGGGTCACCTCAGGTGGCCAAAGGCAGTGGCAGTGCTGCTGAA +
Preference number: 1 (lower is better)
Translates to: AVQIHRGTLYKAGEA*GSPQVAKGSGSAAE
Trigger: TTCAGCAGCACTGCCACTGCCTTTGGCCACCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCTGTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTaGGTTCCTAGGCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCA +
Preference number: 1 (lower is better)
Translates to: PFLAPPHTQLLQGGF*VPRPLGILRSMWKA
Trigger: TGCCTTCCACATGCTTCTCAGGATGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR CCA 90 bp CGGGTCTCCCGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTaGTTGCTCCAGCTGGGGCTGGTGCACGCACAATATACTGGGACT +
Preference number: 1 (lower is better)
Translates to: RVSRTRDVCLNQKQF*LLQLGLVHAQYTGT
Trigger: AGTCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCGGGAGACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 90 bp TTGTTGCTGCAGCTCCTGTACCTTGTGGCAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTC +
Preference number: 1 (lower is better)
Translates to: LLLQLLYLVANLPRH*ARLPHLGEQGCHLV
Trigger: GACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACAGGAGCTGCAGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
3UTR TCA 90 bp TGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTaGAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCA +
Preference number: 1 (lower is better)
Translates to: CHRSFAGGSGCTRPG*RAPRGHSPSKRSFP
Trigger: TGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
3UTR CCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATaGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAG +
Preference number: 1 (lower is better)
Translates to: LCSSQNHGVTKAGTQ*PHVLGGGQGLTDNK
Trigger: CTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR GCA 90 bp CACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTaGTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACAAT +
Preference number: 1 (lower is better)
Translates to: HKTTESLRQAHNGHT*LVEAKDSRTTRMDN
Trigger: ATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 90 bp GGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTaGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGTACCT +
Preference number: 1 (lower is better)
Translates to: GFLRASAPVAFQIIH*QKHHFLHVVFREVP
Trigger: AGGTACTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAGGCTGCGGCTGCAGGTaGCAGTGGGGCTACTCCCAG +
Preference number: 2 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPGCGCR*QWGYSQ
Trigger: CTGGGAGTAGCCCCACTGCCACCTGCAGCCGCAGCC...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGAGGTCTGGGCGGTaGCTCCCCTGCACCTCTCCC +
Preference number: 2 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRGRSGR*LPCTSP
Trigger: GGGAGAGGTGCAGGGGAGTCACCGCCCAGACCTCCC...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTCCGGAGCCCAGGCTCTaGACGGCTGCTGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGPEPRL*TAAASW
Trigger: CCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCAGGTGGGGTCGGTTGGTaGCTGGGGAGGTCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAGGVGW*LGRSGR
Trigger: CCGCCCAGACCTCCCCAGCCACCAACCGACCCCACC...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCACTCTGCCACCCCAGCTaGGTAGGGCCCAGGCCGCTA +
Preference number: 2 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPLCHPS*VGPRPL
Trigger: TAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAG...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCTCCCATCCCGGCCCTaGTCCGAGGGCATCCTGGCC +
Preference number: 2 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLLPSRP*SEGILA
Trigger: GGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAG...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTCCGGAGCCCAGGCTCTaGACGGCTGCTGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPPEPRL*TAAASW
Trigger: CCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp GGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGCCGGAGCCCAGGCTCTaGACGGCTGCTGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GPGQSAGSPGHRDAQHVLPEPRL*TAAASW
Trigger: CCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG...CAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
3UTR-3UTR CCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGTGGGGTCGGTTaGTGGCTGGGGAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGRGGVG*WLGRSG
Trigger: CCCAGACCTCCCCAGCCACCAACCGACCCCACCTCT...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGACTCCCATCCCGGCCCTaGTCCGAGGGCATCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGLPSRP*SEGILA
Trigger: GGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAG...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCCCTGCACCTCTCCCTaGCGGAGCCCAGGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLPCTSP*RSPGSA
Trigger: TGCAGAGCCTGGGCTCCGGCAGGGAGAGGTGCAGGG...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCGTCCCCCAAGGCAGCTaGTCCCTGAGGCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSVPQGS*SLRLTP
Trigger: AGGGGTCAGCCTCAGGGAGCAGCTGCCTTGGGGGAC...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTGTGGCTGGGGAGGTCTaGGCGGTGACTCCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPVAGEV*AVTPLH
Trigger: GTGCAGGGGAGTCACCGCCCAGACCTCCCCAGCCAC...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTGCAGGGTCAGCACTaGCGGGAGTCGGATCCAGGC +
Preference number: 2 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPLQGQH*RESDPG
Trigger: GCCTGGATCCGACTCCCGGCAGTGCTGACCCTGCAG...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTGCCCCTGACTTGCCCTaGAGGGTCAGCACTGCCGGG +
Preference number: 2 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFAPDLP*RVSTAG
Trigger: CCCGGCAGTGCTGACCCTGCAGGGCAAGTCAGGGGC...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTCCCCAGGTTCACTCGTaGGCAGCAGTCCAGGCTGCG +
Preference number: 2 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPPQVHS*AAVQAA
Trigger: CGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGG...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CAA 90 bp GCAGGGTCAGCACTGCCGGGAGTCGGATCCAGGCTCACAACCGCTTaGTTAGGAACAGAGGTGGGGTCGGTTGGTGGCTGGGGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: AGSALPGVGSRLTTA*LGTEVGSVGGWGGL
Trigger: CAGACCTCCCCAGCCACCAACCGACCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCTGGATCCGACTCCCGGCAGTGCTGACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp CGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTGGGCTGCCCTCGAACTaGGGCCTGTCTCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: RTTRMDNGVVWPPDRLCSGLPSN*GLSLRG
Trigger: TCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCC...ACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp CCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTGTGGGGGGCTGCAGGTGGCAGTaGGGCTACTCCCAGATGTGT +
Preference number: 2 (lower is better)
Translates to: PPQLSRAQAAIAPVNPVGGCRWQ*GYSQMC
Trigger: ACACATCTGGGAGTAGCCCCACTGCCACCTGCAGCC...CCCCACAGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGGGAGGTCTGGGCGGTaGCTCCCCTGCACCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEGRSGR*LPCTSP
Trigger: GGGAGAGGTGCAGGGGAGTCACCGCCCAGACCTCCC...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCCAGTGGCAGTGCTGCTaGAGTGGGCTGCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGQWQCC*SGLLPP
Trigger: GGGTGGGAGCAGCCCACTTCAGCAGCACTGCCACTG...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp CCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGGGGGAGGCTAGGAGGTGGCTaGCTACCCTGCTCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: PGNPQDLLGIVMLSTFWGRLGGG*LPCSVS
Trigger: GGAAACAGAGCAGGGTAGTCAGCCACCTCCTAGCCT...CCCCCAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573851.1
3UTR-3UTR CCA 90 bp CCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGGGGGCAGCAGGCTAGGAGGTaGCTGACTACCCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PGNPQDLLGIVMLSTFWGQQARR*LTTLLC
Trigger: ACAGAGCAGGGTAGTCAGCCACCTCCTAGCCTGCTG...CCCCCAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573851.1
3UTR-3UTR TCA 90 bp CTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCATAGTCCCAGAGTCCCATTCATaGGCTGGTTGGGGGTCCACT +
Preference number: 2 (lower is better)
Translates to: LVAVDAHDLAEGHHEGIVPESHS*AGWGST
Trigger: AGTGGACCCCCAACCAGCTCATGAATGGGACTCTGG...GACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573062.5
3UTR-3UTR GCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGCCCACATCTTCCGACTaGCCCAGAATCTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRPTSSD*PRISGE
Trigger: CTCCCCCGAGATTCTGGGGCAGTCGGAAGATGTGGG...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCGGGGGTCACCTCAGGTaGCCAAAGGCAGTGGCAGTG +
Preference number: 2 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGGGHLR*PKAVAV
Trigger: CACTGCCACTGCCTTTGGCCACCTGAGGTGACCCCC...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp CCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACAATGGTCTGAGGGGAGGCTGTaGCCGGATTCTTCCCCGACA +
Preference number: 2 (lower is better)
Translates to: PHVLGGGQGLTDNKDGQWSEGRL*PDSSPT
Trigger: TGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGA...CCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CAA 90 bp GTCTCCCGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTaGCTCCAGCTGGGGCTGGTGCACGCACAATATACTGGGACTGCA +
Preference number: 2 (lower is better)
Translates to: VSRTRDVCLNQKQFW*LQLGLVHAQYTGTA
Trigger: TGCAGTCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGCCCCTGACTTGCCCTaGAGGGTCAGCACTGCCGGG +
Preference number: 2 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGAPDLP*RVSTAG
Trigger: CCCGGCAGTGCTGACCCTGCAGGGCAAGTCAGGGGC...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCACCCCAGGTTCACTCGTaGGCAGCAGTCCAGGCTGCG +
Preference number: 2 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKAPQVHS*AAVQAA
Trigger: CGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGG...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp CCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGTCCCATTCATGAGCTaGTTGGGGGTCCACTTCAGA +
Preference number: 2 (lower is better)
Translates to: PAQACHRSFAGGSGCTRPVPFMS*LGVHFR
Trigger: TCTGAAGTGGACCCCCAACCAGCTCATGAATGGGAC...AGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
3UTR-3UTR GCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGATCCAGCTGGGGCTGGTaGACGCACAATATACTGGGA +
Preference number: 2 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGSSWGW*THNILG
Trigger: TCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGA...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp GTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCGGCTGCAGGTGGCAGTaGGGCTACTCCCAGATGTGT +
Preference number: 2 (lower is better)
Translates to: VSQMQKVCQTLVAAGLGPGCRWQ*GYSQMC
Trigger: ACACATCTGGGAGTAGCCCCACTGCCACCTGCAGCC...GGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CAA 90 bp AAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTaGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACAATGGG +
Preference number: 2 (lower is better)
Translates to: KTTESLRQAHNGHTC*VEAKDSRTTRMDNG
Trigger: CCCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR TCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACCTACTCCCAGATGTGTaGGAGGGGAGCAGAGTAGGT +
Preference number: 2 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHLLPDV*EGSRVG
Trigger: ACCTACTCTGCTCCCCTCTCACACATCTGGGAGTAG...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp AGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCCCCACATCTTCCGACTaGCCCAGAATCTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: RASAPVAFQIIHWQKHHFPTSSD*PRISGE
Trigger: CTCCCCCGAGATTCTGGGGCAGTCGGAAGATGTGGG...GAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp CAGAAGGGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGGCACGCACAATATACTaGGACTGCAAAGGGACCCTC +
Preference number: 2 (lower is better)
Translates to: QKGCGALCHVSQMQKVCQARTIY*DCKGTL
Trigger: GAGGGTCCCTTTGCAGTCCCAGTATATTGTGCGTGC...CTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTACCCCTGTTAATCCTGTaGGGCCCCAGGTTCACTCGT +
Preference number: 2 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLPLLIL*GPRFTR
Trigger: ACGAGTGAACCTGGGGCCCCACAGGATTAACAGGGG...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACAGAGCTATGCCCTTCCTaGCACCCCCGCATACACAGC +
Preference number: 2 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTELCPS*HPRIHS
Trigger: GCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTC...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGACAATATACTGGGACTaGAAAGGGACCCTCAGAAGG +
Preference number: 2 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLTIYWD*KGTLRR
Trigger: CCTTCTGAGGGTCCCTTTGCAGTCCCAGTATATTGT...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR GCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACACGACAGATAATGGGCTaGCCTCGAACTGAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTRQIMG*PRTEAC
Trigger: ACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCG...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR GCA 72 bp GTGGGCTGCTCCCACCCAGGGCCCACATCTTCCGACTaGCCCAGAATCTCGGGGGAGCGGCCTGAAGGCGGC +
Preference number: 3 (lower is better)
Translates to: VGCSHPGPTSSD*PRISGERPEGG
Trigger: GCCGCCTTCAGGCCGCTCCCCCGAGATTCTGGGGCAGTCGGAAGATGTGGGCCCTGGGTGGGAGCAGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR TCA 72 bp TCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTaGACAGGGCTGCCATCTTGTCACTGCGCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: SPPPLGTSSPPW*TGLPSCHCAGS
Trigger: GCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
3UTR CCA 72 bp CCAAGGACTCACGGACAACAAGGATGGACAATGGGGTaGTCTGGCCCCCAGACAGGCTGTGCAGTGCCCGGG +
Preference number: 3 (lower is better)
Translates to: PRTHGQQGWTMG*SGPQTGCAVPG
Trigger: CCCGGGCACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR GCA 72 bp GTCTCCCGTGCCCGGGTCTCCCGCACCCGTGACGTGTaGCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: VSRARVSRTRDV*LNQKQFWLLQL
Trigger: CAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCGGGAGACCCGGGCACGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 72 bp CAGCTCCTGTACCTTGTGGCAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: QLLYLVANLPRH*ARLPHLGEQGC
Trigger: GCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACAGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
3UTR GCA 72 bp TTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTaGTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: FSNAESLPDFGG*WTRPQPRAGPP
Trigger: TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
3UTR GCA 72 bp GCCTCTGGATGCCATCCTGGCTCACCAGCACAAGCGTaGCACCGCTCTTTTGCTGGTGGCAGTGGATGCACA +
Preference number: 3 (lower is better)
Translates to: ASGCHPGSPAQA*HRSFAGGSGCT
Trigger: TGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
3UTR CCA 72 bp TCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTaGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGT +
Preference number: 3 (lower is better)
Translates to: SNAESLPDFGGC*TRPQPRAGPPC
Trigger: ACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
3UTR CCA 72 bp GCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATaGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGT +
Preference number: 3 (lower is better)
Translates to: AWWRPRTHGQQG*TMGWSGPQTGC
Trigger: ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CAA 90 bp TGTACCTTGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTaGTCACTGCGCAGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: CTLWQISPATGHVFPTLVNRAAI*SLRRKP
Trigger: TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTT...CACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
3UTR TCA 72 bp CAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCTaGGGGGAGGCTGTGACCGGATTCTTCCCCGACAGA +
Preference number: 3 (lower is better)
Translates to: QIMGCPRTEACL*GEAVTGFFPDR
Trigger: TCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR CCA 72 bp GCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTaGGTTCCTAGGCCTCTTGGCATCCTGAGAAGCATG +
Preference number: 3 (lower is better)
Translates to: APPHTQLLQGGF*VPRPLGILRSM
Trigger: CATGCTTCTCAGGATGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR TCA 72 bp CAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTaGGGCCTGTCTCTGAGGGGAGGCTGTGACCGGATT +
Preference number: 3 (lower is better)
Translates to: QMSATDNGLPSN*GLSLRGGCDRI
Trigger: AATCCGGTCACAGCCTCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR TCA 72 bp TCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTaGAGGGCACCACGAGGGCATAGTCCCAGTAAACGC +
Preference number: 3 (lower is better)
Translates to: SFAGGSGCTRPG*RAPRGHSPSKR
Trigger: GCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
3UTR GCA 72 bp ACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTaGTTGGTGGAGGCCAAGGACTCACGGACAACAAGG +
Preference number: 3 (lower is better)
Translates to: TESLRQAHNGHT*LVEAKDSRTTR
Trigger: CCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 72 bp GTTGCTCCAGCTGGGGCTGGTGCACGCACAATATACTaGGACTGCAAAGGGACCCTCAGAAGGGACACAGCA +
Preference number: 3 (lower is better)
Translates to: VAPAGAGARTIY*DCKGTLRRDTA
Trigger: TGCTGTGTCCCTTCTGAGGGTCCCTTTGCAGTCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CAA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCAGGCTCACAACCGCTTaGTTAGGAACAGAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: KAELALLLTRDRWGHPCIRLTTA*LGTEVG
Trigger: CCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCT...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 72 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTaGTTGCTCCAGCTGGGGCTGGTGCACGCACAATAT +
Preference number: 3 (lower is better)
Translates to: RTRDVCLNQKQF*LLQLGLVHAQY
Trigger: ATATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 72 bp TCACAAAACCACGGAGTCACTAAGGCAGGCACACAATaGCCACACGTGCTTGGTGGAGGCCAAGGACTCACG +
Preference number: 3 (lower is better)
Translates to: SQNHGVTKAGTQ*PHVLGGGQGLT
Trigger: CGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR GCA 72 bp GGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTaGCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: GALCHVSQMQKV*QTLVAAGLGPS
Trigger: GCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
3UTR GCA 72 bp AGAAGGGCTGCGGGGCCCTTTGTCATGTTTCTCAAATaGAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: RRAAGPFVMFLK*RKSARLWWLLD
Trigger: GTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR-3UTR CAA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATAAACCAGAAGCAGTTTaGGTTGCTCCAGCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHKPEAV*VAPAGA
Trigger: AGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTT...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CCA 72 bp AGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTaGCAAAAGCATCACTTCTTACACGTGGTTTTCAGG +
Preference number: 3 (lower is better)
Translates to: RASAPVAFQIIH*QKHHFLHVVFR
Trigger: CCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCACCGGAGCCCAGGCTCTaGACGGCTGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPPEPRL*TAAASW
Trigger: CCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCACCCCCAGACAGGCTGTaGAGTGCCCGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAPPDRL*SARGQG
Trigger: GCCCTGCCCCCGGGCACTGCACAGCCTGTCTGGGGG...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTGCGCTGCCCATGGTGTaGCAGGAGGCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGALPMV*QEAAPS
Trigger: GCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGC...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTGGTGGGTCCGCACCGTaGACAGGTGGCGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPGGSAP*TGGGSV
Trigger: CACACTGCCGCCACCTGTCCACGGTGCGGACCCACC...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCACAGTGGCAGTGCTGCTaGAGTGGGCTGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPQWQCC*SGLLPP
Trigger: GGGTGGGAGCAGCCCACTTCAGCAGCACTGCCACTG...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCACTGCAGGGTCAGCACTaGCGGGAGTCGGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPLQGQH*RESDPG
Trigger: GCCTGGATCCGACTCCCGGCAGTGCTGACCCTGCAG...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAGCACGGCGTCTCAGCTaGTGCAAGAGGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPARRLS*CKRQAS
Trigger: GGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGC...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGCAGGGCCTCCTGGCTaGCCCCTGAGGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWAGPPG*PLRVSC
Trigger: GCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGC...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGAGGCAGGAGGAGCCCTaGCTGCACAGGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRSYALPGTPAYTAPPRGRQEEP*LHRGSR
Trigger: CCTGGAGCCCCTGTGCAGTCAGGGCTCCTCCTGCCT...CCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCAGGCTCCCTCAAAGTGTaGGCTGCAGGGCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAGSLKV*AAGPGP
Trigger: TGGGCCCGGCCCTGCAGCTCACACTTTGAGGGAGCC...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTTCCAGTTCTCCGGCCTaGGGCTTCTCCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPSSSPA*GFSWLG
Trigger: TCCCAGCCAGGAGAAGCCTCAGGCCGGAGAACTGGA...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGGCTCCACCACGGCGGTaGCCGGAGTCCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGAPPRR*PESRVL
Trigger: CAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGC...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCTCCACCACGGCGGTaGCCGGAGTCCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWAPPRR*PESRVL
Trigger: CAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGC...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCAGCTCTGCACGGCTGCTaGCTCCTGGCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAALHGC*LLAPAH
Trigger: GTGAGCTGGGGCCAGGAGGCAGCAGCCGTGCAGAGC...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACAGCCCCTGACTTGCCCTaGAGGGTCAGCACTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTAPDLP*RVSTAG
Trigger: CCCGGCAGTGCTGACCCTGCAGGGCAAGTCAGGGGC...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCACCAGACTTTGGTGGCTaGTGGACTAGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPPDFGG*WTRPQP
Trigger: GGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGG...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTGGGCTGGGCAGGCTGTaGTGGGTGCAGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRPGGRSYALPGTPAYTAGLGRL*WVQKGC
Trigger: GCAGCCCTTCTGCACCCAGCACAGCCTGCCCAGCCC...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTTTTGCAGGGGAGTCCTaGCGAGTAGGTGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPFAGES*RVGGPR
Trigger: CCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAA...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTACCAGCGCCGACAGGTaGGTCCGCACCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGTSADR*VRTVDR
Trigger: CCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGT...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCAGGGCCGGGCCCACTaGAGCCTTCCTCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGQGRAH*SLPPHR
Trigger: GCGGTGGGGAGGAAGGCTCCAGTGGGCCCGGCCCTG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCGCAGGGCCTCCTGGCTaGCCCCTGAGGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QISPATGHVFPTLVNRAAAGPPG*PLRVSC
Trigger: GCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGC...GGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR TCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCAGAGCAGCCGCGTCCGTaGGTTCTGGTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAEQPRP*VLVQGL
Trigger: GAGTCCCTGCACCAGAACTCACGGACGCGGCTGCTC...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGATCCACACGTCCTTGGTaGGGCCCGCGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGSTRPW*GPRRPP
Trigger: CGGGGGCCTCCGCGGGCCTCACCAAGGACGTGTGGA...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTCCCATCCCGGCCCTaGTCCGAGGGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPLPSRP*SEGILA
Trigger: GGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAG...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGACCCCGGATGCGGTaGCGCTGGACCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRGPRMR*RWTSSS
Trigger: TGATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCC...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGCAGGGCTGGGCGCTTTaGAGGGGAGTCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWQGWAL*RGVLAS
Trigger: ACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCCCTG...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCCCGGAGCCCAGGCTCTaGACGGCTGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGPEPRL*TAAASW
Trigger: CCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCACCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATCCGGAGCCCAGGCTCTaGACGGCTGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: APCGRGPGQSAGSPGHRDPEPRL*TAAASW
Trigger: CCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG...ATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGTCCCCCAAGGCAGCTaGTCCCTGAGGCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWVPQGS*SLRLTP
Trigger: AGGGGTCAGCCTCAGGGAGCAGCTGCCTTGGGGGAC...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTGCAGGCTGTGCTGGGTaGAGAAGGGCTGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPAGCAG*RRAAGP
Trigger: GGGCCCCGCAGCCCTTCTGCACCCAGCACAGCCTGC...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCGCGCTGCCCATGGTGTaGCAGGAGGCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RLPHLGEQGCHLVTAQEAALPMV*QEAAPS
Trigger: GCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGC...GGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCGCTGCCCATGGTGTaGCAGGAGGCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLALPMV*QEAAPS
Trigger: GCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGC...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGCCTCTGCGCTGCCCATaGTGTGGCAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGPLRCP*CGRRRR
Trigger: GCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGG...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCATAGTCCCACCGGGGCCTTCCCGCTaGCTGAGCCCTGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VAVDAHDLAEGHHEGIVPPGPSR*LSPVSA
Trigger: TGCGGAGACAGGGCTCAGCCAGCGGGAAGGCCCCGG...TGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCGTCCTGGCGAGTAGGTaGACCCCGGATGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSVLASR*TPDAVP
Trigger: CGGCACCGCATCCGGGGTCCACCTACTCGCCAGGAC...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTCGCACCGTGGACAGGTaGCGGCAGTGTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGRTVDR*RQCASQ
Trigger: CTGGCTGGCACACTGCCGCCACCTGTCCACGGTGCG...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAATGAGGCGCTGCACGTaGCTGTCGATGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPMRRCT*LSMLLP
Trigger: AGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCAT...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGCAGGGCCGGGCCCACTaGAGCCTTCCTCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRQGRAH*SLPPHR
Trigger: GCGGTGGGGAGGAAGGCTCCAGTGGGCCCGGCCCTG...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAAACGCAAGGGTGGGGTaGCAGGAGCGAGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPNARVG*QERGCT
Trigger: TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTT...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGACTTTGGTGGCTGCTaGACTAGGCCCCAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRDFGGC*TRPQPR
Trigger: CCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTC...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR TCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTACGTGTTTCAAGGCCTaGGGGCTGAGGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPTCFKA*GLRAGA
Trigger: GGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGT...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGTGTTTCAAGGCCTaGGGGCTGAGGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPLFCWWQWMHTTWLKGTTCFKA*GLRAGA
Trigger: GGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGT...GGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCCGACGCGCTGCCGCTTaGGTGCCGTTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGRRAAA*VPFPDP
Trigger: GGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCG...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCGACGCGCTGCCGCTTaGGTGCCGTTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLRRAAA*VPFPDP
Trigger: GGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCG...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGTCTCACACAGTAGCCTaGGCGGCAACCGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRSHTVA*AATGRG
Trigger: TCCCCGACCGGTTGCCGCTCAGGCTACTGTGTGAGA...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACATCTCACACAGTAGCCTaGGCGGCAACCGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTSHTVA*AATGRG
Trigger: TCCCCGACCGGTTGCCGCTCAGGCTACTGTGTGAGA...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCATGGAGTCTCGGTGGATaGGGCGCTGCACGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAWSLGG*GAARGC
Trigger: ACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCA...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTCAGTGGCAGTGCTGCTaGAGTGGGCTGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGQWQCC*SGLLPP
Trigger: GGGTGGGAGCAGCCCACTTCAGCAGCACTGCCACTG...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCCTGCGTCCTCTGCGCTaGCCATGGTGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSLRPLR*PWCGRR
Trigger: CCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAG...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCGGACCCCGGATGCGGTaGCGCTGGACCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSGPRMR*RWTSSS
Trigger: TGATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCC...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGACTTTCCCCTTCCCTTaGTGGGTCCACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRSYALPGTPAYTAPPRGTFPFP*WVHSGG
Trigger: GCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAAAGT...CCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTGCAACCGGTCGGGGATaGAGCTACAGTGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGATGRG*SYSGWG
Trigger: CCCCCAGCCACTGTAGCTGCATCCCCGACCGGTTGC...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTGCTCTGCACGGCTGCTaGCTCCTGGCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PCGRGPGQSAGSPGHRDAALHGC*LLAPAH
Trigger: GTGAGCTGGGGCCAGGAGGCAGCAGCCGTGCAGAGC...AGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp CCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGGCTCTGCACGGCTaGTGCCTCCTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PCGRGPGQSAGSPGHRDAQALHG*CLLAPA
Trigger: AGCTGGGGCCAGGAGGCAGCAGCCGTGCAGAGCCTG...AGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCCCCTGACTTGCCCTaGAGGGTCAGCACTGCCGGG +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWAPDLP*RVSTAG
Trigger: CCCGGCAGTGCTGACCCTGCAGGGCAAGTCAGGGGC...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTGGGGGCAGGAGCTATaGCCTTCCTGGCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGWGQEL*PSWHPR
Trigger: GCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCA...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp CTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAACCCTCCAGCTGTGTaGGGGGCAGAGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVDEVPGNPQDLLGIVMLNPPAV*GAEVGA
Trigger: GGCCCCCACCTCTGCCCCGCACACAGCTGGAGGGTT...GAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CCA 90 bp ACTCACGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCGCTGCCCATGGTGTaGCAGGAGGCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: THGQQGWTMGWSGPQTGCALPMV*QEAAPS
Trigger: GCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGC...ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCCCTCTGCGCTGCCCATaGTGTGGCAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RLPHLGEQGCHLVTAQEAPLRCP*CGRRRR
Trigger: GCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGG...GGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGCCTCTGCGCTGCCCATaGTGTGGCAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKPLRCP*CGRRRR
Trigger: GCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGG...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTCCTGGCGAGTAGGTaGACCCCGGATGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWVLASR*TPDAVP
Trigger: CGGCACCGCATCCGGGGTCCACCTACTCGCCAGGAC...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCGTCCTGGCGAGTAGGTaGACCCCGGATGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VPPLFCWWQWMHTTWLKGVLASR*TPDAVP
Trigger: CGGCACCGCATCCGGGGTCCACCTACTCGCCAGGAC...GCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGCTTGGTGCGTGTGGCTaGGTGGGCCTCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRLGACG*VGLPLP
Trigger: CGGGAGCGGGAGGCCCACCCAGCCACACGCACCAAG...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGGTGGCTGGGGAGGTCTaGGCGGTGACTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGVAGEV*AVTPLH
Trigger: GTGCAGGGGAGTCACCGCCCAGACCTCCCCAGCCAC...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGGTGGGGTCGGTTGGTaGCTGGGGAGGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLGGVGW*LGRSGR
Trigger: CCGCCCAGACCTCCCCAGCCACCAACCGACCCCACC...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCACAGGGAAGTACCTTGTaGACGAGGTCCCGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPQGSTL*TRSRAI
Trigger: GATTGCCCGGGACCTCGTCCACAAGGTACTTCCCTG...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572925.1
CDS-3UTR TCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGAGCAGGGCCTCCTGGCTaGCCCCTGAGGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGAGPPG*PLRVSC
Trigger: GCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGC...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCAGGGCCTCCTGGCTaGCCCCTGAGGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLAGPPG*PLRVSC
Trigger: GCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGC...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGCGACGCGCTGCCGCTTaGGTGCCGTTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKRRAAA*VPFPDP
Trigger: GGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCG...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGAGCAGCCGCGTCCGTaGGTTCTGGTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWEQPRP*VLVQGL
Trigger: GAGTCCCTGCACCAGAACTCACGGACGCGGCTGCTC...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCATAGTCCCAGAGCAGCCGCGTCCGTaGGTTCTGGTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: VAVDAHDLAEGHHEGIVPEQPRP*VLVQGL
Trigger: GAGTCCCTGCACCAGAACTCACGGACGCGGCTGCTC...TGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCGAGCAGCCGCGTCCGTaGGTTCTGGTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGEQPRP*VLVQGL
Trigger: GAGTCCCTGCACCAGAACTCACGGACGCGGCTGCTC...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGAGGCTCCCTCAAAGTGTaGGCTGCAGGGCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGGSLKV*AAGPGP
Trigger: TGGGCCCGGCCCTGCAGCTCACACTTTGAGGGAGCC...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAGGCTCCCTCAAAGTGTaGGCTGCAGGGCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAGSLKV*AAGPGP
Trigger: TGGGCCCGGCCCTGCAGCTCACACTTTGAGGGAGCC...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGATCATTGTCGAGGGTaGCCAGGAGAGGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRDHCRG*PGEAPA
Trigger: TGCTGGCGCCTCTCCTGGTCACCCTCGACAATGATC...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCCCAGGGCGAGGGCGATaGACAGGACAAAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: VDEVPGNPQDLLGIVMLSPGRGR*TGQSAP
Trigger: CGGAGCACTTTGTCCTGTTCATCGCCCTCGCCCTGG...GCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR TCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGCTCCCATCCCGGCCCTaGTCCGAGGGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGLPSRP*SEGILA
Trigger: GGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAG...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCAGGTCTCCCGCACCCGTaGCGTGTGCCTAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAGLPHP*RVPKPE
Trigger: TTCTGGTTTAGGCACACGTCACGGGTGCGGGAGACC...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTGGGCTGCCCTCGAACTaGGGCCTGTCTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPGLPSN*GLSLRG
Trigger: TCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCC...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGCTGCCATCTTGTCACTaGGCAGGAAGCCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRLPSCH*AGSQRH
Trigger: GTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAG...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTGCCGAACACAGGGTCTaGCAGCAGTGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGAEHRV*QQCLLL
Trigger: GAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGC...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGCCGAACACAGGGTCTaGCAGCAGTGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRAEHRV*QQCLLL
Trigger: GAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGC...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCGGACCCCGGATGCGGTaGCGCTGGACCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: LLLVAVDAHDLAEGHHEGGPRMR*RWTSSS
Trigger: TGATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCC...GCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGCCAGCACGTGGTTCTTaGCATAGAGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: GRSYALPGTPAYTAPPRGPARGS*HRAAAS
Trigger: GGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGG...CCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTCCAGCACGTGGTTCTTaGCATAGAGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGPARGS*HRAAAS
Trigger: GGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGG...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTCCACGGAGCGAATGCTaGTTCGTTTCCGTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPPRSEC*FVSVAW
Trigger: CCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGG...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTTTGCATGTGGGGAGCTaGTGGAGGAGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRPGGRSYALPGTPAYTALHVGS*WRSRRG
Trigger: GCCTCTCCTGCTCCTCCAGCAGCTCCCCACATGCAA...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGTCCACGGAATGCTGCTaGTCCACCACGGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGSTECC*STTAVP
Trigger: GGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGA...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCACCCTGCACCTCTCCCTaGCGGAGCCCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAPCTSP*RSPGSA
Trigger: TGCAGAGCCTGGGCTCCGGCAGGGAGAGGTGCAGGG...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACCCACATCTTCCGACTaGCCCAGAATCTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTPTSSD*PRISGE
Trigger: CTCCCCCGAGATTCTGGGGCAGTCGGAAGATGTGGG...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTTGGGGGCAGGAGCTATaGCCTTCCTGGCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPWGQEL*PSWHPR
Trigger: GCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCA...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGTGGGGGCAGGAGCTATaGCCTTCCTGGCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLWGQEL*PSWHPR
Trigger: GCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCA...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTGCAGGCTGTGCTGGGTaGAGAAGGGCTGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGAGCAG*RRAAGP
Trigger: GGGCCCCGCAGCCCTTCTGCACCCAGCACAGCCTGC...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCGGGCCTCCACACCTCTaGTCAGGGCAGCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LVDEVPGNPQDLLGIVMLGPPHL*SGQPGW
Trigger: CCATCCAGGCTGCCCTGAGCAGAGGTGTGGAGGCCC...GAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CCA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGAGCGCTGCCCATGGTGTaGCAGGAGGCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGALPMV*QEAAPS
Trigger: GCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGC...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GGGAAGTACCTAATGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACACCTCTGCGCTGCCCATaGTGTGGCAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GKYLMQNARVGWQERGCTPLRCP*CGRRRR
Trigger: GCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGG...TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCATTAGGTACTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGCCGGGGCCTTCCCGCTaGCTGAGCCCTGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGPGPSR*LSPVSA
Trigger: TGCGGAGACAGGGCTCAGCCAGCGGGAAGGCCCCGG...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTGTCCTGGCGAGTAGGTaGACCCCGGATGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RTTRMDNGVVWPPDRLCSVLASR*TPDAVP
Trigger: CGGCACCGCATCCGGGGTCCACCTACTCGCCAGGAC...ACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTTTGCAGGGGAGTCCTaGCGAGTAGGTGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSFAGES*RVGGPR
Trigger: CCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAA...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGGCTCACCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACCGGATCCCCAGGGCTaGGCGCTTTGCAGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LAHQHKRATALLLVAVDAPDPQG*ALCRGV
Trigger: GACTCCCCTGCAAAGCGCCCAGCCCTGGGGATCCGG...TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCACGCGTCCGTGAGTTCTaGTGCAGGGACTCCACACAC +
Preference number: 4 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPRVREF*CRDSTH
Trigger: GTGTGTGGAGTCCCTGCACCAGAACTCACGGACGCG...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCGGAACACATAGTCGGTaGCCCGCCCCGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSGTHSR*PAPCPS
Trigger: AGATGGGCACGGGGCGGGCCACCGACTATGTGTTCC...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGGATGCAGCTACAGTaGCTGGGGGTTGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWGMQLQ*LGVACG
Trigger: CCCACATGCAACCCCCAGCCACTGTAGCTGCATCCC...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTACCAGCGCCGACAGGTaGGTCCGCACCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFTSADR*VRTVDR
Trigger: CCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGT...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCGTGCGTGTGGCTGGGTaGGCCTCCCGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLVRVAG*ASRSRC
Trigger: GCAGCGGGAGCGGGAGGCCCACCCAGCCACACGCAC...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACAATGGTGGAGTCTCGGTaGATGAGGCGCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTMVESR*MRRCTW
Trigger: CCACGTGCAGCGCCTCATCCACCGAGACTCCACCAT...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCGGTGGGGTCGGTTGGTaGCTGGGGAGGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGGGVGW*LGRSGR
Trigger: CCGCCCAGACCTCCCCAGCCACCAACCGACCCCACC...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCAGAGGTGGGGTCGGTTaGTGGCTGGGGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLRGGVG*WLGRSG
Trigger: CCCAGACCTCCCCAGCCACCAACCGACCCCACCTCT...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACAAACGCAAGGGTGGGGTaGCAGGAGCGAGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTNARVG*QERGCT
Trigger: TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTT...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCAAGGAGGAAGTGGGGATaGCCGAGCAAGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPRRKWG*PSKQHA
Trigger: GGCATGCTGCTTGCTCGGCCATCCCCACTTCCTCCT...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGGACTTTGGTGGCTGCTaGACTAGGCCCCAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGDFGGC*TRPQPR
Trigger: CCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTC...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR TCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTTGCACACGACCTGGCTaGAGGGCACCACGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPCTRPG*RAPRGH
Trigger: ATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCA...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGTGGAGTCTCGGTGGATaGGGCGCTGCACGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGWSLGG*GAARGC
Trigger: ACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCA...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTTCCAGTTCTCCGGCCTaGGGCTTCTCCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPSSSPA*GFSWLG
Trigger: TCCCAGCCAGGAGAAGCCTCAGGCCGGAGAACTGGA...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCTCCAGTTCTCCGGCCTaGGGCTTCTCCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGSSSPA*GFSWLG
Trigger: TCCCAGCCAGGAGAAGCCTCAGGCCGGAGAACTGGA...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTGGGCTGCCCTCGAACTaGGGCCTGTCTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFGLPSN*GLSLRG
Trigger: TCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCC...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTGGCCTCTTGGCATCCTaGGAAGCATGTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGGLLAS*EACGRQ
Trigger: CTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGCC...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp CGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCCTGCGTCCTCTGCGCTaGCCATGGTGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLPHLGEQGCHLVTAQEALRPLR*PWCGRR
Trigger: CCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAG...GGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGCTGCGTCCTCTGCGCTaGCCATGGTGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKLRPLR*PWCGRR
Trigger: CCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAG...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCCCTGAGGGTTTCCTaGCCTCTGCTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRPGGRSYALPGTPAYTAPLRVS*PLLVAA
Trigger: TGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGG...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGCAGGGCTGGGCGCTTTaGAGGGGAGTCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRQGWAL*RGVLAS
Trigger: ACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCCCTG...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGCAGGGCTGGGCGCTTTaGAGGGGAGTCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKQGWAL*RGVLAS
Trigger: ACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCCCTG...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCTGTCCTCCGACGCGCTaGCGCTTGAGTGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLVAVDAHDLAEGHHEGCPPTR*RLSAVS
Trigger: GGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACA...GCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGCAGAGTCAGGCTCTCTaGAGACTGGTGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRSYALPGTPAYTAPPRGQSQAL*RLVQGE
Trigger: CTCTCCCTGCACCAGTCTGCAGAGAGCCTGACTCTG...CCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTGCAACCGGTCGGGGATaGAGCTACAGTGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPATGRG*SYSGWG
Trigger: CCCCCAGCCACTGTAGCTGCATCCCCGACCGGTTGC...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGAGGGCCAGACGTCCTTaGGGATCTCGTGCTCTATGC +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRRARRP*GSRALC
Trigger: GCATAGAGCACGAGATCCGCAAGGACGTCTGGCCCT...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACGCTCCACCACGGCGGTaGCCGGAGTCCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHAPPRR*PESRVL
Trigger: CAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGC...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTAACTCCACGGAATGCTaGTGCTCCACCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGNSTEC*CSTTAV
Trigger: CACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTT...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCACTGCAGGGTCAGCACTaGCGGGAGTCGGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLALQGQH*RESDPG
Trigger: GCCTGGATCCGACTCCCGGCAGTGCTGACCCTGCAG...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTCCAGACTTTGGTGGCTaGTGGACTAGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPPDFGG*WTRPQP
Trigger: GGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGG...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCAGACAGGCTGTGCAGTaGCCGGGGGCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLRQAVQ*PGAGLG
Trigger: GCCCAGCCCTGCCCCCGGGCACTGCACAGCCTGTCT...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGCACAATGGCCACACGTaGTTGGTGGAGGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRHNGHT*LVEAKD
Trigger: GTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTG...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCGCCCCGTACCCACTGTaGCTGTGCTCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPLFCWWQWMHTTWLKGTAPYPL*LCSQAH
Trigger: GTGAGCCTGAGAGCACAGGCACAGTGGGTACGGGGC...GGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGCTCCCTCAGCACCTaGCCCGTACCCACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AQACHRSFAGGSGCTRPGCSLST*PVPTVP
Trigger: AGGCACAGTGGGTACGGGGCAGGTGCTGAGGGAGCA...GCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGAGCCAGCCCAGACGATaGTCCCTCAGCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKSQPRR*SLSTCP
Trigger: GGGGCAGGTGCTGAGGGAGCATCGTCTGGGCTGGCT...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp CTTGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACAGCTCCGCAGGGCCTCCTaGCTGACCCCTGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LVANLPRHWARLPHLGEQLRRAS*LTPEGF
Trigger: GAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAG...CTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CCA 90 bp CCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTCTCCGCAGGGCCTCCTaGCTGACCCCTGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PAQACHRSFAGGSGCTRPLRRAS*LTPEGF
Trigger: GAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAG...AGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCCGGGGCCTTCCCGCTaGCTGAGCCCTGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNPGPSR*LSPVSA
Trigger: TGCGGAGACAGGGCTCAGCCAGCGGGAAGGCCCCGG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTTTTGCAGGGGAGTCCTaGCGAGTAGGTGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPFAGES*RVGGPR
Trigger: CCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAA...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCCCGGATCCCCAGGGCTaGGCGCTTTGCAGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGPDPQG*ALCRGV
Trigger: GACTCCCCTGCAAAGCGCCCAGCCCTGGGGATCCGG...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGCCACCGCTCTTTTGCTaGTGGCAGTGGATGCACACG +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRPPLFC*WQWMHT
Trigger: CGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTCCCCTTCCCTTGCTaGGTCCACAGCGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLFPFPC*VHSGGS
Trigger: AGAGCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAA...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGTTCCCCTTCCCTTGCTaGGTCCACAGCGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWFPFPC*VHSGGS
Trigger: AGAGCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAA...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCGGAACACATAGTCGGTaGCCCGCCCCGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGGTHSR*PAPCPS
Trigger: AGATGGGCACGGGGCGGGCCACCGACTATGTGTTCC...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGTCGGATCCAGGCTCACAACCGCTTTGTTAGGAACAGAGGTGGGGTCGGTTGGCCGAGGCCGCGCGGCTaGCCGCTAGGTGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SRIQAHNRFVRNRGGVGWPRPRG*PLGGGS
Trigger: ACTACCACCACCTAGCGGCCAGCCGCGCGGCCTCGG...CCAACCGACCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCTGGATCCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268989.8
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCGGGGGCCGGTCAGGTaGGATAACGCTATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWRGPVR*DNAMVH
Trigger: GTGCACCATAGCGTTATCCCACCTGACCGGCCCCCG...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCGGGGGCCGGTCAGGTaGGATAACGCTATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGRGPVR*DNAMVH
Trigger: GTGCACCATAGCGTTATCCCACCTGACCGGCCCCCG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAGAACTTGGTGCGTGTaGCTGGGTGGGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGRTWCV*LGGPPA
Trigger: AGCGGGAGGCCCACCCAGCCACACGCACCAAGTTCT...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCATCATCTAGGCTTGACTaGATGCCCGAGGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAASSRLD*MPEATE
Trigger: CTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGA...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACCAGGGCCGGGCCCACTaGAGCCTTCCTCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHQGRAH*SLPPHR
Trigger: GCGGTGGGGAGGAAGGCTCCAGTGGGCCCGGCCCTG...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCAAAGTGGGTGTCCATaGCACCCCCGTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRPGGRSYALPGTPAYTAQSGCP*HPRWGS
Trigger: ACTTCCCCAACGGGGGTGCCATGGACACCCACTTTG...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGGGGGCCGATGAGATGTGCCTaGCTGCCCAGATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PGNPQDLLGIVMLSTFWGPMRCA*LPRSPP
Trigger: GGGAGGTGATCTGGGCAGCCAGGCACATCTCATCGG...CCCCCAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGACTTTGGTGGCTGCTaGACTAGGCCCCAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLDFGGC*TRPQPR
Trigger: CCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTC...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTGGATGGACAATGGGGTaGTCTGGCCCCCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPGWTMG*SGPQTG
Trigger: GCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCC...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCACCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATCTGCTCAGGGCAGCCTaGATGGCTGGACCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: APCGRGPGQSAGSPGHRDLLRAA*MAGPAR
Trigger: ACGAGCTGGTCCAGCCATCCAGGCTGCCCTGAGCAG...ATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR TCA 90 bp GGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGACAGCAGTTTCTCTTTaGCTGCGTCCTCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRSYALPGTPAYTAPPRGTAVSL*LRPLRC
Trigger: GCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGT...CCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCAACAGCAGTTTCTCTTTaGCTGCGTCCTCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPTAVSL*LRPLRC
Trigger: GCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGT...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp TGGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGCACGGCGTCTCAGCTaGTGCAAGAGGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WARLPHLGEQGCHLVTAQARRLS*CKRQAS
Trigger: GGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGC...CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR TCA 90 bp CCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGCACGGCGTCTCAGCTaGTGCAAGAGGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAQACHRSFAGGSGCTRPARRLS*CKRQAS
Trigger: GGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGC...AGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCACGGCGTCTCAGCTaGTGCAAGAGGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLARRLS*CKRQAS
Trigger: GGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGC...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACGTGTTTCAAGGCCTaGGGGCTGAGGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSTCFKA*GLRAGA
Trigger: GGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGT...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCACCAGAACTTTCTCGATaGGCGCCGTGCGTACCCATA +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAPELSR*APCVPI
Trigger: TATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGG...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCTCCACACGTCCTTGGTaGGGCCCGCGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSSTRPW*GPRRPP
Trigger: CGGGGGCCTCCGCGGGCCTCACCAAGGACGTGTGGA...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGACCAGGGCGAGGGCGATaGACAGGACAAAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRPGRGR*TGQSAP
Trigger: CGGAGCACTTTGTCCTGTTCATCGCCCTCGCCCTGG...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTCCAGGGCGAGGGCGATaGACAGGACAAAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RTTRMDNGVVWPPDRLCSPGRGR*TGQSAP
Trigger: CGGAGCACTTTGTCCTGTTCATCGCCCTCGCCCTGG...ACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCGGGAGGTCTGGGCGGTaGCTCCCCTGCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIIGRSGR*LPCTSP
Trigger: GGGAGAGGTGCAGGGGAGTCACCGCCCAGACCTCCC...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACTCTGCCACCCCAGCTaGGTAGGGCCCAGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGLCHPS*VGPRPL
Trigger: TAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAG...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCCTCTGCCACCCCAGCTaGGTAGGGCCCAGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSLCHPS*VGPRPL
Trigger: TAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAG...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGTCTGAGGGGAGGCTGTaGCCGGATTCTTCCCCGACA +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWSEGRL*PDSSPT
Trigger: TGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGA...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCACTTGGTGAACAGGGCTaGCATCTTGTCACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAALGEQG*HLVTAQ
Trigger: CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAG...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTTCACCAGCACAAGCGTaGCACCGCTCTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGSPAQA*HRSFAG
Trigger: ACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGA...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCACCTCCCTGTGGGAAATaGAGCGGCGGCCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAPPCGK*SGGLWM
Trigger: CATCCAGAGGCCGCCGCTGCATTTCCCACAGGGAGG...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGAACTTTCCCCTTCCCTTaGTGGGTCCACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGTFPFP*WVHSGG
Trigger: GCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAAAGT...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCACTGGGCCCAAAGCCCTaGATCTCGATCATGTCACCA +
Preference number: 4 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPLGPKP*ISIMSP
Trigger: TGGTGACATGATCGAGATGCAGGGCTTTGGGCCCAG...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCTTGCATGTGGGGAGCTaGTGGAGGAGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGLHVGS*WRSRRG
Trigger: GCCTCTCCTGCTCCTCCAGCAGCTCCCCACATGCAA...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGACCACTGCGTCCACCTaGTCCATCTCCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWTTAST*SISFLL
Trigger: GAGCAAGAAGGAGATGGAGCAGGTGGACGCAGTGGT...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGCGGTGGATGAGGCGCTaGACGTGGCTGTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRRWMRR*TWLSML
Trigger: CAGCATCGACAGCCACGTGCAGCGCCTCATCCACCG...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCACCGGGTCCTGCTTCCTaGTCAGGTTTTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAAPGPAS*SGFGLE
Trigger: TTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGG...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACCCTCTGCGCTGCCCATaGTGTGGCAGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHPLRCP*CGRRRR
Trigger: GCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGG...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTCTCCGCAGGGCCTCCTaGCTGACCCCTGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGLRRAS*LTPEGF
Trigger: GAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAG...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACCCGGGGCCTTCCCGCTaGCTGAGCCCTGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHPGPSR*LSPVSA
Trigger: TGCGGAGACAGGGCTCAGCCAGCGGGAAGGCCCCGG...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCCGCGTCCGTGAGTTCTaGTGCAGGGACTCCACACAC +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGRVREF*CRDSTH
Trigger: GTGTGTGGAGTCCCTGCACCAGAACTCACGGACGCG...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTGGATGCACACGACCTaGCTGAAGGGCACCACGAGG +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLWMHTT*LKGTTR
Trigger: CCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCA...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACATTTTGCTGGTGGCAGTaGATGCACACGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTFCWWQ*MHTTWL
Trigger: CAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAA...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTGTGGGGCTCTGGATGCCATCCTaGCTCACCAGCACAAGCGTG +
Preference number: 4 (lower is better)
Translates to: PPQLSRAQAAIAPVNPVGLWMPS*LTSTSV
Trigger: CACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAG...CCCCACAGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTTTCGTTTCCGTAGCTTaGGGAACACTTTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPFVSVA*GTLSPS
Trigger: GGAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAA...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGTGCAGCTACAGTGGCTaGGGGTTGCATGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWCSYSG*GLHVGS
Trigger: GCTCCCCACATGCAACCCCCAGCCACTGTAGCTGCA...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCGTGCGTGTGGCTGGGTaGGCCTCCCGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSVRVAG*ASRSRC
Trigger: GCAGCGGGAGCGGGAGGCCCACCCAGCCACACGCAC...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCTTGGTGCGTGTGGCTaGGTGGGCCTCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIILGACG*VGLPLP
Trigger: CGGGAGCGGGAGGCCCACCCAGCCACACGCACCAAG...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCTGCCTGAGGAGAACTTaGTGCGTGTGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGCLRRT*CVWLGG
Trigger: CCCACCCAGCCACACGCACCAAGTTCTCCTCAGGCA...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTGCCTGAGGAGAACTTaGTGCGTGTGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLCLRRT*CVWLGG
Trigger: CCCACCCAGCCACACGCACCAAGTTCTCCTCAGGCA...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGATGAGGCGCTGCACGTaGCTGTCGATGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGMRRCT*LSMLLP
Trigger: AGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCAT...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCCGATGAGATGTGCCTaGCTGCCCAGATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGPMRCA*LPRSPP
Trigger: GGGAGGTGATCTGGGCAGCCAGGCACATCTCATCGG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTCCGATGAGATGTGCCTaGCTGCCCAGATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPPMRCA*LPRSPP
Trigger: GGGAGGTGATCTGGGCAGCCAGGCACATCTCATCGG...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCACGGCTGCTGCCTCCTaGCCCCAGCTCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LVDEVPGNPQDLLGIVMLTAAAS*PQLTCS
Trigger: AGAACAAGTGAGCTGGGGCCAGGAGGCAGCAGCCGT...GAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CCA 90 bp AGTCGGATCCAGGCTCACAACCGCTTTGTTAGGAACAGAGGTGGGGTCGGTTGGGGCTGCGGCTGCAGGTaGCAGTGGGGCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRIQAHNRFVRNRGGVGWGCGCR*QWGYSQ
Trigger: CTGGGAGTAGCCCCACTGCCACCTGCAGCCGCAGCC...CCAACCGACCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCTGGATCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCTCACCAGGGACAGATaGGGACACCCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGLTRDR*GHPCIP
Trigger: GGGGATGCATGGGTGTCCCCATCTGTCCCTGGTGAG...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTGAGCTATGCCCTTCCTaGCACCCCCGCATACACAGC +
Preference number: 4 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPELCPS*HPRIHS
Trigger: GCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTC...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGAGGAGGAAGTGGGGATaGCCGAGCAAGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWRRKWG*PSKQHA
Trigger: GGCATGCTGCTTGCTCGGCCATCCCCACTTCCTCCT...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
3UTR CAA 72 bp GCACTGCCGGGAGTCGGATCCAGGCTCACAACCGCTTaGTTAGGAACAGAGGTGGGGTCGGTTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALPGVGSRLTTA*LGTEVGSVGGW
Trigger: CCAGCCACCAACCGACCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCTGGATCCGACTCCCGGCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp ATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTCTTCCCCACCTTGGTaGACAGGGCTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: ISPATGHVFPTLVNRAAISSPPW*TGLPSC
Trigger: ACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGA...GATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR TCA 90 bp GTCCCAGTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGGCAGGGCCTCCTGGCTaGCCCCTGAGGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VPVNALFQLGVPQSPIHEAGPPG*PLRVSC
Trigger: GCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGC...CTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCGACGCGCTGCCGCTTaGGTGCCGTTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTERRAAA*VPFPDP
Trigger: GGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCCCAGAGTCCCATTCATaGGCTGGTTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LLLVAVDAHDLAEGHHEGPESHS*AGWGST
Trigger: AGTGGACCCCCAACCAGCTCATGAATGGGACTCTGG...GCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTGTGGCCGGGGTAGATaGTCCGGAACACATAGTCGG +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGCGRGR*SGTHSR
Trigger: CCGACTATGTGTTCCGGATCATCTACCCCGGCCACA...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTCTCACACAGTAGCCTaGGCGGCAACCGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGSHTVA*AATGRG
Trigger: TCCCCGACCGGTTGCCGCTCAGGCTACTGTGTGAGA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCAGTCCAGGATCTGGATaGGGGAGCGCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSSPGSG*GSACWQ
Trigger: TTGCCAACATGCGCTCCCTCATCCAGATCCTGGACT...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGATCTCCTGGGCATCGTaGTGCTCAGCACGTTCATTG +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWISWAS*CSARSL
Trigger: CAATGAACGTGCTGAGCATCACGATGCCCAGGAGAT...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR TCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTGGCCTCTTGGCATCCTaGGAAGCATGTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPGLLAS*EACGRQ
Trigger: CTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGCC...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR TCA 90 bp CCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTAGGCTAGGAGGTGGCTaGCTACCCTGCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PCGRGPGQSAGSPGHRDARLGGG*LPCSVS
Trigger: GGAAACAGAGCAGGGTAGTCAGCCACCTCCTAGCCT...AGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR TCA 90 bp CCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTATCTCCTGGGCATCGTaGTGCTCAGCACGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PCGRGPGQSAGSPGHRDAISWAS*CSARSG
Trigger: CCCAGAACGTGCTGAGCATCACGATGCCCAGGAGAT...AGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCTGCGTCCTCTGCGCTaGCCATGGTGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNLRPLR*PWCGRR
Trigger: CCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTTGACTGCGTCCTCTaGGCTGCCCATGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGFDCVL*AAHGVA
Trigger: TGCCACACCATGGGCAGCGCAGAGGACGCAGTCAAA...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TGGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGCTGCCATCTTGTCACTaGGCAGGAAGCCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: WARLPHLGEQGCHLVTAQLPSCH*AGSQRH
Trigger: GTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAG...CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCCTTGGTGAACAGGGCTaGCATCTTGTCACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSLGEQG*HLVTAQ
Trigger: CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAG...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCCTGCCCTCTGCTTGTTaGTGCAGCTCCTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSLPSAC*CSSCTL
Trigger: CAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAG...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCCCCTGAGGGTTTCCTaGCCTCTGCTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGPLRVS*PLLVAA
Trigger: TGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGG...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCCCCCTGAGGGTTTCCTaGCCTCTGCTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPPLFCWWQWMHTTWLKGPLRVS*PLLVAA
Trigger: TGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGG...GCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp AGCCCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGAGGGTCTGCCAGCAGTaGCTCCTTCTCGTAGTACTT +
Preference number: 4 (lower is better)
Translates to: SPGQGLHVPGQGLACMCWRVCQQ*LLLVVL
Trigger: AAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCT...CCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGGCTCACCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCAGCCGAACACAGGGTCTaGCAGCAGTGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LAHQHKRATALLLVAVDAAEHRV*QQCLLL
Trigger: GAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGC...TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCGGACCCCGGATGCGGTaGCGCTGGACCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIGPRMR*RWTSSS
Trigger: TGATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCC...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCCAGGGCTGGGCGCTTTaGAGGGGAGTCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIQGWAL*RGVLAS
Trigger: ACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCCCTG...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTGTCCGTGAGTTCTGGTaGAGGGACTCCACACACTCG +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPVREFW*RDSTHS
Trigger: CGAGTGTGTGGAGTCCCTGCACCAGAACTCACGGAC...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCGTCCGTGAGTTCTGGTaGAGGGACTCCACACACTCG +
Preference number: 4 (lower is better)
Translates to: PPLFCWWQWMHTTWLKGTVREFW*RDSTHS
Trigger: CGAGTGTGTGGAGTCCCTGCACCAGAACTCACGGAC...GGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGCCAGCACGTGGTTCTTaGCATAGAGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKPARGS*HRAAAS
Trigger: GGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGG...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCACCAGCACGTGGTTCTTaGCATAGAGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAPARGS*HRAAAS
Trigger: GGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGG...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGGTGCCACCGCTCTTTTaGTGGTGGCAGTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RATALLLVAVDAHDLAEGVPPLF*WWQWMH
Trigger: GTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC...CCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCCGGTGGCCCGCCCCGTaGCCATCTCCTCCATATCCA +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLRWPAP*PSPPYP
Trigger: TGGATATGGAGGAGATGGGCACGGGGCGGGCCACCG...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCGGTGGCCCGCCCCGTaGCCATCTCCTCCATATCCA +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNRWPAP*PSPPYP
Trigger: TGGATATGGAGGAGATGGGCACGGGGCGGGCCACCG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTGGGATAACGCTATGGTaGACCAGCGCCGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPGITLW*TSADRW
Trigger: CCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCC...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGCTGGTACCTTGCTaGCACCACTGCGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFLLVPC*HHCVHL
Trigger: CAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAG...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGCACCTGCTGGTACCTTaGTGCCACCACTGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRHLLVP*CHHCVH
Trigger: GTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTG...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTTCGAACTCCACGGAATaGTGCTGCTCCACCACGGCG +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFSNSTE*CCSTTA
Trigger: CGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGA...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTCCAGCAGATCGCACATaGCCTGCACATAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPPADRT*PAHSPR
Trigger: ACGTGGGCTATGTGCAGGGCATGTGCGATCTGCTGG...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCTGCTCCGATGAGATGTaGCTGGCTGCCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGCSDEM*LAAQIT
Trigger: GGTGATCTGGGCAGCCAGGCACATCTCATCGGAGCA...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTTGCTCCGATGAGATGTaGCTGGCTGCCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: RGPGQSAGSPGHRDAQHVCSDEM*LAAQIT
Trigger: GGTGATCTGGGCAGCCAGGCACATCTCATCGGAGCA...AACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACCAGGCTCTGCACGGCTaGTGCCTCCTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHQALHG*CLLAPA
Trigger: AGCTGGGGCCAGGAGGCAGCAGCCGTGCAGAGCCTG...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTCGACAGATAATGGGCTaGCCTCGAACTGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGRQIMG*PRTEAC
Trigger: ACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCG...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRNLPRH*ARLPHL
Trigger: AAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATT...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCTCCGCAGGGCCTCCTaGCTGACCCCTGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNLRRAS*LTPEGF
Trigger: GAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCCGGATCCCCAGGGCTaGGCGCTTTGCAGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEPDPQG*ALCRGV
Trigger: GACTCCCCTGCAAAGCGCCCAGCCCTGGGGATCCGG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGTGGATGCACACGACCTaGCTGAAGGGCACCACGAGG +
Preference number: 4 (lower is better)
Translates to: ALLLVAVDAHDLAEGHHEWMHTT*LKGTTR
Trigger: CCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCA...CTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCCGCTCTTTTGCTGGTaGCAGTGGATGCACACGACC +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGPLFCW*QWMHTT
Trigger: GGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGG...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCCGCTCTTTTGCTGGTaGCAGTGGATGCACACGACC +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWPLFCW*QWMHTT
Trigger: GGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGG...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCCCACCGCTCTTTTGCTaGTGGCAGTGGATGCACACG +
Preference number: 4 (lower is better)
Translates to: AQACHRSFAGGSGCTRPGPPLFC*WQWMHT
Trigger: CGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG...GCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp CCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCCTCTGGATGCCATCCTaGCTCACCAGCACAAGCGTG +
Preference number: 4 (lower is better)
Translates to: PPLFCWWQWMHTTWLKGTLWMPS*LTSTSV
Trigger: CACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAG...GGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGGCTGGGGGTTGCATGTaGGGAGCTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGAGGCM*GAAGGA
Trigger: TGCTCCTCCAGCAGCTCCCCACATGCAACCCCCAGC...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTTGCAGCTACAGTGGCTaGGGGTTGCATGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFCSYSG*GLHVGS
Trigger: GCTCCCCACATGCAACCCCCAGCCACTGTAGCTGCA...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGGGATGCAGCTACAGTaGCTGGGGGTTGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLGMQLQ*LGVACG
Trigger: CCCACATGCAACCCCCAGCCACTGTAGCTGCATCCC...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAACCAGCGCCGACAGGTaGGTCCGCACCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPTSADR*VRTVDR
Trigger: CCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGT...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTGGGATAACGCTATaGTGCACCAGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLGGITL*CTSADR
Trigger: CCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACC...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTAGAACTTGGTGCGTGTaGCTGGGTGGGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGRTWCV*LGGPPA
Trigger: AGCGGGAGGCCCACCCAGCCACACGCACCAAGTTCT...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGATGAGGCGCTGCACGTaGCTGTCGATGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRMRRCT*LSMLLP
Trigger: AGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCAT...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAGAATCTTCAGGGTCCTaGGGCTCCGGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAESSGS*GSGGSR
Trigger: TCTGGAACCCCCGGAGCCCCAGGACCCTGAAGATTC...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCATCTGAGTCCAGGATCTaGATGAGGGAGCGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPSESRI*MRERML
Trigger: CAACATGCGCTCCCTCATCCAGATCCTGGACTCAGA...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGCCCCTGTTAATCCTGTaGGGCCCCAGGTTCACTCGT +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGPLLIL*GPRFTR
Trigger: ACGAGTGAACCTGGGGCCCCACAGGATTAACAGGGG...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCCCCTGTTAATCCTGTaGGGCCCCAGGTTCACTCGT +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGPLLIL*GPRFTR
Trigger: ACGAGTGAACCTGGGGCCCCACAGGATTAACAGGGG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCGGGGGTCACCTCAGGTaGCCAAAGGCAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGGGHLR*PKAVAV
Trigger: CACTGCCACTGCCTTTGGCCACCTGAGGTGACCCCC...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCCTCCAAGGGGGTTTCTaGGTTCCTAGGCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGLQGGF*VPRPLG
Trigger: GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAG...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGAAGGAGGAAGTGGGGATaGCCGAGCAAGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGRRKWG*PSKQHA
Trigger: GGCATGCTGCTTGCTCGGCCATCCCCACTTCCTCCT...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGGGATGGACAATGGGGTaGTCTGGCCCCCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGGWTMG*SGPQTG
Trigger: GCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCC...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAGCCACACGTGCTTGGTaGAGGCCAAGGACTCACGGA +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAATRAW*RPRTHG
Trigger: TCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGC...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CACCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCAGCAGGCTAGGAGGTaGCTGACTACCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLVDEVPGNPQDLLGIVMQQARR*LTTLLC
Trigger: ACAGAGCAGGGTAGTCAGCCACCTCCTAGCCTGCTG...CATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR TCA 90 bp GCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACACAGCAGTTTCTCTTTaGCTGCGTCCTCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ATALLLVAVDAHDLAEGHTAVSL*LRPLRC
Trigger: GCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGT...GTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCGCACGGCGTCTCAGCTaGTGCAAGAGGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSARRLS*CKRQAS
Trigger: GGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGC...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTCTTCCCCACCTTGGTaGACAGGGCTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLSSPPW*TGLPSC
Trigger: ACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGA...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTTCTTCCCCACCTTGGTaGACAGGGCTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPSSPPW*TGLPSC
Trigger: ACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGA...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCCAGAACTTTCTCGATaGGCGCCGTGCGTACCCATA +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWPELSR*APCVPI
Trigger: TATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGG...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGCCAGAGTCCCATTCATaGGCTGGTTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLPESHS*AGWGST
Trigger: AGTGGACCCCCAACCAGCTCATGAATGGGACTCTGG...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGGCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCTGCACACGACCTGGCTaGAGGGCACCACGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LAEGHHEGIVPVNALFQLCTRPG*RAPRGH
Trigger: ATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCA...GAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGTGTGGCCGGGGTAGATaGTCCGGAACACATAGTCGG +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLCGRGR*SGTHSR
Trigger: CCGACTATGTGTTCCGGATCATCTACCCCGGCCACA...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTTGTGGCCGGGGTAGATaGTCCGGAACACATAGTCGG +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPCGRGR*SGTHSR
Trigger: CCGACTATGTGTTCCGGATCATCTACCCCGGCCACA...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCCCGCGAGCAGATCATTaGGAGCATCGCGTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGPRADH*EHRVQF
Trigger: AAACTGCACGCGATGCTCTCAATGATCTGCTCGCGG...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268989.8
CDS-3UTR TCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCTCCACACGTCCTTGGTaGGGCCCGCGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGSTRPW*GPRRPP
Trigger: CGGGGGCCTCCGCGGGCCTCACCAAGGACGTGTGGA...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGAGTCGATGCTGCTGCCTaGGGAGAACTTGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRVDAAA*GELGAC
Trigger: ACACGCACCAAGTTCTCCTCAGGCAGCAGCATCGAC...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTGTCGATGCTGCTGCCTaGGGAGAACTTGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPVDAAA*GELGAC
Trigger: ACACGCACCAAGTTCTCCTCAGGCAGCAGCATCGAC...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCTGGAGTCTCGGTGGATaGGGCGCTGCACGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLWSLGG*GAARGC
Trigger: ACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCA...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCCCAGGGCGAGGGCGATaGACAGGACAAAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSPGRGR*TGQSAP
Trigger: CGGAGCACTTTGTCCTGTTCATCGCCCTCGCCCTGG...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGGGAGGTCTGGGCGGTaGCTCCCCTGCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLGRSGR*LPCTSP
Trigger: GGGAGAGGTGCAGGGGAGTCACCGCCCAGACCTCCC...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTGGTCTCCCGCACCCGTaGCGTGTGCCTAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGGLPHP*RVPKPE
Trigger: TTCTGGTTTAGGCACACGTCACGGGTGCGGGAGACC...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCTCTGAGGGGAGGCTGTaGCCGGATTCTTCCCCGACA +
Preference number: 4 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGSEGRL*PDSSPT
Trigger: TGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGA...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTGGCCTCTTGGCATCCTaGGAAGCATGTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RTTRMDNGVVWPPDRLCSGLLAS*EACGRQ
Trigger: CTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGCC...ACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CACCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGGCTCTGCTAGATTCTTaGCATCCCGGCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLVDEVPGNPQDLLGIVMALLDS*HPGLWG
Trigger: TCCCCAAAGGCCGGGATGTCAAGAATCTAGCAGAGC...CATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGATTTGACTGCGTCCTCTaGGCTGCCCATGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRFDCVL*AAHGVA
Trigger: TGCCACACCATGGGCAGCGCAGAGGACGCAGTCAAA...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCTTGGTGAACAGGGCTaGCATCTTGTCACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ATALLLVAVDAHDLAEGHLGEQG*HLVTAQ
Trigger: CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAG...GTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCCCTCTGCTTGTTGCTaGAGCTCCTGTACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGPSACC*SSCTLW
Trigger: CCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGG...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTGCCCTCTGCTTGTTaGTGCAGCTCCTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGLPSAC*CSSCTL
Trigger: CAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGCCCCTGAGGGTTTCCTaGCCTCTGCTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLPLRVS*PLLVAA
Trigger: TGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGG...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTAGGGTCTGCCAGCAGTaGCTCCTTCTCGTAGTACTT +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGRVCQQ*LLLVVL
Trigger: AAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCT...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCGCCGAACACAGGGTCTaGCAGCAGTGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGAEHRV*QQCLLL
Trigger: GAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGC...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CTGGCTCACCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACAGAGTCAGGCTCTCTaGAGACTGGTGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LAHQHKRATALLLVAVDAQSQAL*RLVQGE
Trigger: CTCTCCCTGCACCAGTCTGCAGAGAGCCTGACTCTG...TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCCACGGAGCGAATGCTaGTTCGTTTCCGTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWPRSEC*FVSVAW
Trigger: CCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGG...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGCTGGGCCCAAAGCCCTaGATCTCGATCATGTCACCA +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGLGPKP*ISIMSP
Trigger: TGGTGACATGATCGAGATGCAGGGCTTTGGGCCCAG...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCGCCCGGGACACGATCTaGCTCTTCATACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLARDTI*LFILSH
Trigger: GTGTGAGAGTATGAAGAGGCAGATCGTGTCCCGGGC...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTGGGATAACGCTATGGTaGACCAGCGCCGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGGITLW*TSADRW
Trigger: CCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCC...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGAGGGCCAGACGTCCTTaGGGATCTCGTGCTCTATGC +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLRARRP*GSRALC
Trigger: GCATAGAGCACGAGATCCGCAAGGACGTCTGGCCCT...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGACCACTGCGTCCACCTaGTCCATCTCCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGTTAST*SISFLL
Trigger: GAGCAAGAAGGAGATGGAGCAGGTGGACGCAGTGGT...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCTGCTGGTACCTTGCTaGCACCACTGCGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGILLVPC*HHCVHL
Trigger: CAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAG...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGGAAGTACCTAATGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACACACCTGCTGGTACCTTaGTGCCACCACTGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: GKYLMQNARVGWQERGCTHLLVP*CHHCVH
Trigger: GTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTG...TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCATTAGGTACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGAGCAGGCCTTCCACTCTaGCAACACCTGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGAGLPL*QHLLVP
Trigger: AGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGC...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAGGCTGTCGATGCTGCTaGCTGAGGAGAACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAGCRCC*LRRTWC
Trigger: GCACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCC...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCGTGGCTGTCGATGCTaGTGCCTGAGGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPRGCRC*CLRRTW
Trigger: CCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACG...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACAATGGCGGTGGATGAGGCGCTaGACGTGGCTGTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: PHVLGGGQGLTDNKDGQWRWMRR*TWLSML
Trigger: CAGCATCGACAGCCACGTGCAGCGCCTCATCCACCG...CCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCCGGTGGATGAGGCGCTaGACGTGGCTGTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIRWMRR*TWLSML
Trigger: CAGCATCGACAGCCACGTGCAGCGCCTCATCCACCG...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACTCCACGGAATGCTGCTaGTCCACCACGGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHSTECC*STTAVP
Trigger: GGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGA...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTCTAGGCTTGACTGGATaGCCGAGGCCACGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPLGLTG*PRPRSN
Trigger: ATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAG...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGTCGAAGCCCACGCTCTaGCCCTCATCTAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLSKPTL*PSSRLD
Trigger: GTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGA...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTTCGAAGCCCACGCTCTaGCCCTCATCTAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFSKPTL*PSSRLD
Trigger: GTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGA...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCCCTCAAAGTGTGAGCTaGAGGGCCGGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIPQSVS*RAGPTG
Trigger: TCCAGTGGGCCCGGCCCTGCAGCTCACACTTTGAGG...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCATTCTCTATGAGCATCTaGACCTTGTGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPFSMSI*TLWTRS
Trigger: GGACCTCGTCCACAAGGTGCAGATGCTCATAGAGAA...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CAGAAGGGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGCAGGCTCTGCACGGCTaGTGCCTCCTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QKGCGALCHVSQMQKVCQQALHG*CLLAPA
Trigger: AGCTGGGGCCAGGAGGCAGCAGCCGTGCAGAGCCTG...CTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCCCCTGCACCTCTCCCTaGCGGAGCCCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSPCTSP*RSPGSA
Trigger: TGCAGAGCCTGGGCTCCGGCAGGGAGAGGTGCAGGG...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTTCCAGCTGGGGCTGGTaGACGCACAATATACTGGGA +
Preference number: 4 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPSSWGW*THNILG
Trigger: TCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGA...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCCCCACATCTTCCGACTaGCCCAGAATCTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGPTSSD*PRISGE
Trigger: CTCCCCCGAGATTCTGGGGCAGTCGGAAGATGTGGG...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTATTCCTCAGAGCAAGTaGTCCGGTCGCATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PRPGGRSYALPGTPAYTAIPQSK*SGRIPD
Trigger: ATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGCGACAGATAATGGGCTaGCCTCGAACTGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWRQIMG*PRTEAC
Trigger: ACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCG...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCGACAGATAATGGGCTaGCCTCGAACTGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGRQIMG*PRTEAC
Trigger: ACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCG...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCCAGACTTTGGTGGCTaGTGGACTAGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNPDFGG*WTRPQP
Trigger: GGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTCCCCCAGACAGGCTGTaGAGTGCCCGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGPPDRL*SARGQG
Trigger: GCCCTGCCCCCGGGCACTGCACAGCCTGTCTGGGGG...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACAGGGCTGAGGCAAGCCTCCACTaGACCTCCTTCTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: WQISPATGHVFPTLVNRAEASLH*TSFFTF
Trigger: GAACGTGAAGAAGGAGGTGCAGTGGAGGCTTGCCTC...AGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CCA 90 bp GGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCCAAGGAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: GVTKAGTQWPHVLGGGQGNLPRH*ARLPHL
Trigger: AAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATT...TCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: VFPTLVNRAAILSLRRKPNLPRH*ARLPHL
Trigger: AAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATT...TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCTCCGCAGGGCCTCCTaGCTGACCCCTGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIILRRAS*LTPEGF
Trigger: GAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAG...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGGCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCTTTGCAGGGGAGTCCTaGCGAGTAGGTGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: LAEGHHEGIVPVNALFQLFAGES*RVGGPR
Trigger: CCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAA...GAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCCCGGATCCCCAGGGCTaGGCGCTTTGCAGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSPDPQG*ALCRGV
Trigger: GACTCCCCTGCAAAGCGCCCAGCCCTGGGGATCCGG...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCACACGACCTGGCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTCGCGTCCGTGAGTTCTaGTGCAGGGACTCCACACAC +
Preference number: 4 (lower is better)
Translates to: AHDLAEGHHEGIVPVNALRVREF*CRDSTH
Trigger: GTGTGTGGAGTCCCTGCACCAGAACTCACGGACGCG...AAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTTGGATGCACACGACCTaGCTGAAGGGCACCACGAGG +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGWMHTT*LKGTTR
Trigger: CCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCA...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGAGGAGGACCACCGCTCTTTTGCTaGTGGCAGTGGATGCACACG +
Preference number: 4 (lower is better)
Translates to: GLHVPGQGLACMCWGRGGPPLFC*WQWMHT
Trigger: CGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG...TCCTCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCCAGGTGTCCTCCCTGTaGGAAATGCAGCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSQVSSL*EMQRRP
Trigger: AGGCCGCCGCTGCATTTCCCACAGGGAGGACACCTG...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTATGGTGGAGTCTCGGTaGATGAGGCGCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGMVESR*MRRCTW
Trigger: CCACGTGCAGCGCCTCATCCACCGAGACTCCACCAT...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCATGGTGGAGTCTCGGTaGATGAGGCGCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGMVESR*MRRCTW
Trigger: CCACGTGCAGCGCCTCATCCACCGAGACTCCACCAT...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGGAATCTTCAGGGTCCTaGGGCTCCGGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGESSGS*GSGGSR
Trigger: TCTGGAACCCCCGGAGCCCCAGGACCCTGAAGATTC...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGTCATCTAGGCTTGACTaGATGCCCGAGGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRSSRLD*MPEATE
Trigger: CTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGA...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCAAAGTGGGTGTCCATaGCACCCCCGTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFQSGCP*HPRWGS
Trigger: ACTTCCCCAACGGGGGTGCCATGGACACCCACTTTG...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTTTTGGTTGCTCCAGCTaGGGCTGGTGCACGCACAAT +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPFGCSS*GWCTHN
Trigger: ATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAAA...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTGCAGTCTCAGGGACATaGCAGATGTCTGCGACAGAT +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGAVSGT*QMSATD
Trigger: ATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp ACTCACGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTCTCACCAGGGACAGATaGGGACACCCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: THGQQGWTMGWSGPQTGCLTRDR*GHPCIP
Trigger: GGGGATGCATGGGTGTCCCCATCTGTCCCTGGTGAG...ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGGAAGTACCTAATGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACACTCACCAGGGACAGATaGGGACACCCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: GKYLMQNARVGWQERGCTLTRDR*GHPCIP
Trigger: GGGGATGCATGGGTGTCCCCATCTGTCCCTGGTGAG...TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCATTAGGTACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGCTCCAAGGGGGTTTCTaGGTTCCTAGGCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLLQGGF*VPRPLG
Trigger: GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAG...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCTCCAAGGGGGTTTCTaGGTTCCTAGGCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPLQGGF*VPRPLG
Trigger: GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAG...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCACGGACAACAAGGATaGACAATGGGGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPHGQQG*TMGWSG
Trigger: GCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTG...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGATGGCCACACGTGCTTaGTGGAGGCCAAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRMATRA*WRPRTH
Trigger: GTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCAT...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CAA 72 bp TTCCTGCCCTCTGCTTGTTGCTGCAGCTCCTGTACCTaGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: FLPSACCCSSCT*WQISPATGHVF
Trigger: GAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR TCA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGTCTTCCCCACCTTGGTaGACAGGGCTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKSSPPW*TGLPSC
Trigger: ACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGA...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp GCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGCCAGAACTTTCTCGATaGGCGCCGTGCGTACCCATA +
Preference number: 4 (lower is better)
Translates to: ALLLVAVDAHDLAEGHHEPELSR*APCVPI
Trigger: TATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGG...CTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp CACTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACTGCACACGACCTGGCTaGAGGGCACCACGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: HSAPHKTTESLRQAHNGHCTRPG*RAPRGH
Trigger: ATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCA...GTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGTCGGATTGGGAGCTGTaGGGTTCCGCGAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGSDWEL*GSASRS
Trigger: TGATCTGCTCGCGGAACCTCACAGCTCCCAATCCGA...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268989.8
CDS-3UTR TCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCGATCATTGTCGAGGGTaGCCAGGAGAGGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLDHCRG*PGEAPA
Trigger: TGCTGGCGCCTCTCCTGGTCACCCTCGACAATGATC...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGAGTCCAGGATCTGGATaGGGGAGCGCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLSPGSG*GSACWQ
Trigger: TTGCCAACATGCGCTCCCTCATCCAGATCCTGGACT...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTAGTCCAGGATCTGGATaGGGGAGCGCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFSPGSG*GSACWQ
Trigger: TTGCCAACATGCGCTCCCTCATCCAGATCCTGGACT...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGTGTTGTTGTCACGGATaGTCTCTCGGTAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPGQSAGSPGHRDAQHVLCCCHG*SLGRPP
Trigger: TGGAGGCCTACCGAGAGATCATCCGTGACAACAACA...CAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR TCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCGGCCTCTTGGCATCCTaGGAAGCATGTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGGLLAS*EACGRQ
Trigger: CTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGCC...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp GCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAATTTGACTGCGTCCTCTaGGCTGCCCATGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ARLPHLGEQGCHLVTAQEFDCVL*AAHGVA
Trigger: TGCCACACCATGGGCAGCGCAGAGGACGCAGTCAAA...TTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTTTGACTGCGTCCTCTaGGCTGCCCATGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGFDCVL*AAHGVA
Trigger: TGCCACACCATGGGCAGCGCAGAGGACGCAGTCAAA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGCAGTTTCTCTTTGACTaGGTCCTCTGCGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGQFLFD*VLCAAH
Trigger: ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTG...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCATAGTCCCACAGTTTCTCTTTGACTaGGTCCTCTGCGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: VAVDAHDLAEGHHEGIVPQFLFD*VLCAAH
Trigger: ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTG...TGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCAGTTTCTCTTTGACTaGGTCCTCTGCGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGQFLFD*VLCAAH
Trigger: ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCCTTGGTGAACAGGGCTaGCATCTTGTCACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLPHLGEQGCHLVTAQEALGEQG*HLVTAQ
Trigger: CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAG...GGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp CCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTCCCTCTGCTTGTTGCTaGAGCTCCTGTACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PAQACHRSFAGGSGCTRPPSACC*SSCTLW
Trigger: CCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGG...AGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp TGTACCTTGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGCTGCCCTCTGCTTGTTaGTGCAGCTCCTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: CTLWQISPATGHVFPTLVLPSAC*CSSCTL
Trigger: CAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAG...CACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp GTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCACCCCTGAGGGTTTCCTaGCCTCTGCTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VFPTLVNRAAILSLRRKPPLRVS*PLLVAA
Trigger: TGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGG...TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGTGTCCTCCGACGCGCTaGCGCTTGAGTGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTECPPTR*RLSAVS
Trigger: GGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACA...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGATATCCTCCTTCGGCTaGACCAGCACGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LCPSWHPRIHSSSKGVSGISSFG*TSTWFL
Trigger: CAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATAT...CCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCCAAGGACAGAGTCAGGCTCTCTaGAGACTGGTGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GVTKAGTQWPHVLGGGQGQSQAL*RLVQGE
Trigger: CTCTCCCTGCACCAGTCTGCAGAGAGCCTGACTCTG...TCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCGTGCCACCGCTCTTTTaGTGGTGGCAGTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGVPPLF*WWQWMH
Trigger: GTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGTCACCAGCACAAGCGTaGCACCGCTCTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLSPAQA*HRSFAG
Trigger: ACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGA...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTTCACCAGCACAAGCGTaGCACCGCTCTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PAQACHRSFAGGSGCTRPSPAQA*HRSFAG
Trigger: ACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGA...AGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGATCACCAGCACAAGCGTaGCACCGCTCTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRSPAQA*HRSFAG
Trigger: ACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGA...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACCCTCCCTGTGGGAAATaGAGCGGCGGCCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHPPCGK*SGGLWM
Trigger: CATCCAGAGGCCGCCGCTGCATTTCCCACAGGGAGG...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCCGGTGGCCCGCCCCGTaGCCATCTCCTCCATATCCA +
Preference number: 4 (lower is better)
Translates to: VSQMQKVCQTLVAAGLGPRWPAP*PSPPYP
Trigger: TGGATATGGAGGAGATGGGCACGGGGCGGGCCACCG...GGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCACTGGGCCCAAAGCCCTaGATCTCGATCATGTCACCA +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLALGPKP*ISIMSP
Trigger: TGGTGACATGATCGAGATGCAGGGCTTTGGGCCCAG...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTGCTCCATCTCCTTCTTaGTCATGCCGAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGAPSPS*SCRTCS
Trigger: ACTACAAGTTCGGCATGAGCAAGAAGGAGATGGAGC...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGGCAGGCCTTCCACTCTaGCAACACCTGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGAGLPL*QHLLVP
Trigger: AGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGC...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTGCAGGCCTTCCACTCTaGCAACACCTGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGIAGLPL*QHLLVP
Trigger: AGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGC...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGGAAGTACCTAATGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGGCTGTCGATGCTGCTaGCTGAGGAGAACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GKYLMQNARVGWQERGCTGCRCC*LRRTWC
Trigger: GCACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCC...TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCATTAGGTACTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp ACTCACGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTCGTGGCTGTCGATGCTaGTGCCTGAGGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: THGQQGWTMGWSGPQTGCRGCRC*CLRRTW
Trigger: CCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACG...ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCCTCAAAGTGTGAGCTaGAGGGCCGGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEPQSVS*RAGPTG
Trigger: TCCAGTGGGCCCGGCCCTGCAGCTCACACTTTGAGG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACCTCAAAGTGTGAGCTaGAGGGCCGGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPPQSVS*RAGPTG
Trigger: TCCAGTGGGCCCGGCCCTGCAGCTCACACTTTGAGG...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTCCAGCAGATCGCACATaGCCTGCACATAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGPADRT*PAHSPR
Trigger: ACGTGGGCTATGTGCAGGGCATGTGCGATCTGCTGG...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGGGGCTGGGCAGGCTGTaGTGGGTGCAGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAGPFVMFLKCRKSARLWGLGRL*WVQKGC
Trigger: GCAGCCCTTCTGCACCCAGCACAGCCTGCCCAGCCC...CCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGCACAATGGCCACACGTaGTTGGTGGAGGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGHNGHT*LVEAKD
Trigger: GTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTG...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTAAATCATACACACTCTaGTCCTCACAAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPKSYTL*SSQNHG
Trigger: TCCGTGGTTTTGTGAGGAGCAGAGTGTGTATGATTT...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGNLPRH*ARLPHL
Trigger: AAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATT...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCGCGTCCGTGAGTTCTaGTGCAGGGACTCCACACAC +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNRVREF*CRDSTH
Trigger: GTGTGTGGAGTCCCTGCACCAGAACTCACGGACGCG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGGTCCCATTCATGAGCTaGTTGGGGGTCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGVPFMS*LGVHFR
Trigger: TCTGAAGTGGACCCCCAACCAGCTCATGAATGGGAC...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCACACGACCTGGCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTCCGCTCTTTTGCTGGTaGCAGTGGATGCACACGACC +
Preference number: 4 (lower is better)
Translates to: AHDLAEGHHEGIVPVNALPLFCW*QWMHTT
Trigger: GGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGG...AAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCGGGATGCAGCTACAGTaGCTGGGGGTTGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIGMQLQ*LGVACG
Trigger: CCCACATGCAACCCCCAGCCACTGTAGCTGCATCCC...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCGGTGGGTCCGCACCGTaGACAGGTGGCGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RASAPVAFQIIHWQKHHFGGSAP*TGGGSV
Trigger: CACACTGCCGCCACCTGTCCACGGTGCGGACCCACC...GAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCAGGTGGGTCCGCACCGTaGACAGGTGGCGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKAGGSAP*TGGGSV
Trigger: CACACTGCCGCCACCTGTCCACGGTGCGGACCCACC...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCGGTGGGATAACGCTATaGTGCACCAGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSGGITL*CTSADR
Trigger: CCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACC...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGATCTGCCAACACCTGCTaGTACCTTGCTGCCACCACT +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRSANTC*YLAATT
Trigger: AGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGA...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGTGCGTGTGGCTGGGTaGGCCTCCCGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLVRVAG*ASRSRC
Trigger: GCAGCGGGAGCGGGAGGCCCACCCAGCCACACGCAC...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCTGCCTGAGGAGAACTTaGTGCGTGTGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSCLRRT*CVWLGG
Trigger: CCCACCCAGCCACACGCACCAAGTTCTCCTCAGGCA...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGTCTGAGTCCAGGATCTaGATGAGGGAGCGCATGTTG +
Preference number: 4 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWSESRI*MRERML
Trigger: CAACATGCGCTCCCTCATCCAGATCCTGGACTCAGA...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCAGAGGTGGGGTCGGTTaGTGGCTGGGGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSRGGVG*WLGRSG
Trigger: CCCAGACCTCCCCAGCCACCAACCGACCCCACCTCT...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGGCTGCGGCTGCAGGTaGCAGTGGGGCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLGCGCR*QWGYSQ
Trigger: CTGGGAGTAGCCCCACTGCCACCTGCAGCCGCAGCC...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCCCCCAGGTTCACTCGTaGGCAGCAGTCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSPQVHS*AAVQAA
Trigger: CGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGG...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACGGGGGTCACCTCAGGTaGCCAAAGGCAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHGGHLR*PKAVAV
Trigger: CACTGCCACTGCCTTTGGCCACCTGAGGTGACCCCC...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCTGCAGAACGCAAGGGTaGGGTGGCAGGAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIICRTQG*GGRSEA
Trigger: AGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCCGACAGAGTCACCCTaGGATTCCTCAGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFPTESP*DSSEQV
Trigger: CACTTGCTCTGAGGAATCCCAGGGTGACTCTGTCGG...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCACCGACAGAGTCACCCTaGGATTCCTCAGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAPTESP*DSSEQV
Trigger: CACTTGCTCTGAGGAATCCCAGGGTGACTCTGTCGG...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp GGGAAGTACCTAATGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACACTCCAAGGGGGTTTCTaGGTTCCTAGGCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GKYLMQNARVGWQERGCTLQGGF*VPRPLG
Trigger: GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAG...TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCATTAGGTACTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACGAGCTATGCCCTTCCTaGCACCCCCGCATACACAGC +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNELCPS*HPRIHS
Trigger: GCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTC...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp AGTCGGATCCAGGCTCACAACCGCTTTGTTAGGAACAGAGGTGGGGTCGGTTGGAGGAGGAAGTGGGGATaGCCGAGCAAGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: SRIQAHNRFVRNRGGVGWRRKWG*PSKQHA
Trigger: GGCATGCTGCTTGCTCGGCCATCCCCACTTCCTCCT...CCAACCGACCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCTGGATCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGCTGGGCAGGCTGTGCTaGGTGCAGAAGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLLGRLC*VQKGCG
Trigger: CCCGCAGCCCTTCTGCACCCAGCACAGCCTGCCCAG...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTATGGCCACACGTGCTTaGTGGAGGCCAAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGIMATRA*WRPRTH
Trigger: GTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCAT...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGAAGGCAGGCACACAATaGCCACACGTGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLKAGTQ*PHVLGG
Trigger: TCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTT...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp TACCTTGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAAACAGCAGTTTCTCTTTaGCTGCGTCCTCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: YLVANLPRHWARLPHLGETAVSL*LRPLRC
Trigger: GCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGT...TTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR TCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCACGTGTTTCAAGGCCTaGGGGCTGAGGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGTCFKA*GLRAGA
Trigger: GGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGT...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAATCTCCTGGGCATCGTaGTGCTCAGCACGTTCATTG +
Preference number: 4 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLAISWAS*CSARSL
Trigger: CAATGAACGTGCTGAGCATCACGATGCCCAGGAGAT...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR TCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGCTACTCCCAGATGTGTaGGAGGGGAGCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGLLPDV*EGSRVG
Trigger: ACCTACTCTGCTCCCCTCTCACACATCTGGGAGTAG...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCTCTGAGGGGAGGCTGTaGCCGGATTCTTCCCCGACA +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIISEGRL*PDSSPT
Trigger: TGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGA...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCTGCGTCCTCTGCGCTaGCCATGGTGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLLRPLR*PWCGRR
Trigger: CCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAG...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGATTTGACTGCGTCCTCTaGGCTGCCCATGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGFDCVL*AAHGVA
Trigger: TGCCACACCATGGGCAGCGCAGAGGACGCAGTCAAA...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCTGCCATCTTGTCACTaGGCAGGAAGCCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIILPSCH*AGSQRH
Trigger: GTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAG...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAACCCTCTGCTTGTTGCTaGAGCTCCTGTACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ARLPHLGEQGCHLVTAQEPSACC*SSCTLW
Trigger: CCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGG...TTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCCCACGGAGCGAATGCTaGTTCGTTTCCGTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGPRSEC*FVSVAW
Trigger: CCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGG...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTGCAACCGGTCGGGGATaGAGCTACAGTGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLATGRG*SYSGWG
Trigger: CCCCCAGCCACTGTAGCTGCATCCCCGACCGGTTGC...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCGCTCCATCTCCTTCTTaGTCATGCCGAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ALPGTPAYTAPPRGFLGSAPSPS*SCRTCS
Trigger: ACTACAAGTTCGGCATGAGCAAGAAGGAGATGGAGC...GGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACCACCTGCTGGTACCTTaGTGCCACCACTGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHHLLVP*CHHCVH
Trigger: GTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTG...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGCCGGGTCCTGCTTCCTaGTCAGGTTTTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGPGPAS*SGFGLE
Trigger: TTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGG...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTCCACGGAATGCTGCTaGTCCACCACGGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGSTECC*STTAVP
Trigger: GGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGA...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACAACTCCACGGAATGCTaGTGCTCCACCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHNSTEC*CSTTAV
Trigger: CACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTT...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGTCGAACTCCACGGAATaGTGCTGCTCCACCACGGCG +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTESNSTE*CCSTTA
Trigger: CGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGA...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCAGGCCACGGAGTAATTaGGAGAGGAGGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIRPRSN*ERRAVL
Trigger: CAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCT...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACAATGGTGCTCCGATGAGATGTaGCTGGCTGCCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: PHVLGGGQGLTDNKDGQWCSDEM*LAAQIT
Trigger: GGTGATCTGGGCAGCCAGGCACATCTCATCGGAGCA...CCATTGTCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCTGCTCCGATGAGATGTaGCTGGCTGCCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSCSDEM*LAAQIT
Trigger: GGTGATCTGGGCAGCCAGGCACATCTCATCGGAGCA...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTTTCTCTATGAGCATCTaGACCTTGTGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCGRGPGQSAGSPGHRDAFSMSI*TLWTRS
Trigger: GGACCTCGTCCACAAGGTGCAGATGCTCATAGAGAA...AGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR GCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGCTCTGCACGGCTGCTaGCTCCTGGCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGALHGC*LLAPAH
Trigger: GTGAGCTGGGGCCAGGAGGCAGCAGCCGTGCAGAGC...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTTCCAGCTGGGGCTGGTaGACGCACAATATACTGGGA +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGISSWGW*THNILG
Trigger: TCCCAGTATATTGTGCGTGCACCAGCCCCAGCTGGA...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CGCACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTTGCTCCAGCTGGGGAGAAGCAGTTTTGGTTaGTCCAGCTGGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RTRDVCLNQKQFWLLQLGRSSFG*SSWGWC
Trigger: GCACCAGCCCCAGCTGGAGCAACCAAAACTGCTTCT...CCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGCGCACCCGTGACGTGTaGCTAAACCAGAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLRTRDV*LNQKQF
Trigger: AAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCATTCCTCAGAGCAAGTaGTCCGGTCGCATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGIPQSK*SGRIPD
Trigger: ATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGAGACAGGCTGTGCAGTaGCCGGGGGCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLRQAVQ*PGAGLG
Trigger: GCCCAGCCCTGCCCCCGGGCACTGCACAGCCTGTCT...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTTTTTGCTGGTGGCAGTaGATGCACACGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGFCWWQ*MHTTWL
Trigger: CAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAA...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCCTCTGGATGCCATCCTaGCTCACCAGCACAAGCGTG +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSLWMPS*LTSTSV
Trigger: CACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAG...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCGCTGGGGGTTGCATGTaGGGAGCTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSAGGCM*GAAGGA
Trigger: TGCTCCTCCAGCAGCTCCCCACATGCAACCCCCAGC...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAGGTGGGATAACGCTATaGTGCACCAGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPGGITL*CTSADR
Trigger: CCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACC...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCGAATCTTCAGGGTCCTaGGGCTCCGGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIIESSGS*GSGGSR
Trigger: TCTGGAACCCCCGGAGCCCCAGGACCCTGAAGATTC...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCTCATCTAGGCTTGACTaGATGCCCGAGGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLSSRLD*MPEATE
Trigger: CTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGA...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGTGGCTGGGGAGGTCTaGGCGGTGACTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGVAGEV*AVTPLH
Trigger: GTGCAGGGGAGTCACCGCCCAGACCTCCCCAGCCAC...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTGCTCCAGCTGGGGCTaGTGCACGCACAATATACTG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGCSSWG*CTHNIL
Trigger: CAGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTTTGGTTGCTCCAGCTaGGGCTGGTGCACGCACAAT +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGFGCSS*GWCTHN
Trigger: ATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAAA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAATCACTTCTTACACGTaGTTTTCAGGGAAGTACCTA +
Preference number: 4 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPITSYT*FSGKYL
Trigger: TAGGTACTTCCCTGAAAACCACGTGTAAGAAGTGAT...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGAGCAGTCTCAGGGACATaGCAGATGTCTGCGACAGAT +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRAVSGT*QMSATD
Trigger: ATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACCTCACCAGGGACAGATaGGGACACCCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHLTRDR*GHPCIP
Trigger: GGGGATGCATGGGTGTCCCCATCTGTCCCTGGTGAG...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCTGGGCAGGCTGTGCTaGGTGCAGAAGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGLGRLC*VQKGCG
Trigger: CCCGCAGCCCTTCTGCACCCAGCACAGCCTGCCCAG...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAACAAGGATGGACAATaGGGTGGTCTGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGNKDGQ*GGLAPR
Trigger: TCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTT...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GTCCCAGTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCACAGGGTCCCACTGTaGAGACAGAGACAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPVNALFQLGVPQSPIHEHRVPL*RQRQPA
Trigger: GGCTGGCTGTCTCTGTCTCCACAGTGGGACCCTGTG...CTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR TCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGAGGCAGGAGGAGCCCTaGCTGCACAGGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLRQEEP*LHRGSR
Trigger: CCTGGAGCCCCTGTGCAGTCAGGGCTCCTCCTGCCT...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACAGAGGAGGGCAGTCCTaGGTCTGGAGAGTCGAACTC +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHRGGQS*VWRVEL
Trigger: GAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCT...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTGTTGTTGTCACGGATaGTCTCTCGGTAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGCCCHG*SLGRPP
Trigger: TGGAGGCCTACCGAGAGATCATCCGTGACAACAACA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGGCTGCCCTCGAACTaGGGCCTGTCTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGGLPSN*GLSLRG
Trigger: TCCCCTCAGAGACAGGCCTCAGTTCGAGGGCAGCCC...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp GCACGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAACAGTTTCTCTTTGACTaGGTCCTCTGCGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: ARLPHLGEQGCHLVTAQEQFLFD*VLCAAH
Trigger: ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTG...TTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR GCA 90 bp GCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGGCTGCTGTCTTCATaGACAAACTTCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: AQACHRSFAGGSGCTRPGWLLSS*TNFLVT
Trigger: TGTCACCAGGAAGTTTGTGCATGAAGACAGCAGCCA...GCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGGTTCTGCCATCTTGTCACTaGGCAGGAAGCCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VNALFQLGVPQSPIHELVLPSCH*AGSQRH
Trigger: GTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAG...AACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCTTGGTGAACAGGGCTaGCATCTTGTCACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNLGEQG*HLVTAQ
Trigger: CTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGACTGCCCTCTGCTTGTTaGTGCAGCTCCTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGLPSAC*CSSCTL
Trigger: CAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAG...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTTTTTCCGCCAGGTATTaGACGACCTTGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPFSARY*TTLSRT
Trigger: AGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAA...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTTGTCCTCCGACGCGCTaGCGCTTGAGTGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLCPPTR*RLSAVS
Trigger: GGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACA...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATGTCCTCCGACGCGCTaGCGCTTGAGTGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKACPPTR*RLSAVS
Trigger: GGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACA...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAGTCCGTGAGTTCTGGTaGAGGGACTCCACACACTCG +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPVREFW*RDSTHS
Trigger: CGAGTGTGTGGAGTCCCTGCACCAGAACTCACGGAC...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGGAAGTACCTAATGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAATATCCTCCTTCGGCTaGACCAGCACGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GKYLMQNARVGWQERGCTISSFG*TSTWFL
Trigger: CAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATAT...TGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCATTAGGTACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCGTGCCACCGCTCTTTTaGTGGTGGCAGTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIIVPPLF*WWQWMH
Trigger: GTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTACTTTCCCCTTCCCTTaGTGGGTCCACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLTFPFP*WVHSGG
Trigger: GCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAAAGT...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCAGATATCCACGGAGCGAATaGTGCTTCGTTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: GEAVTGFFPDRVTLGFLRYPRSE*CFVSVA
Trigger: AGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATA...TCTGAGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCGGGATAACGCTATGGTaGACCAGCGCCGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSQMQKVCQTLVAAGLGPGITLW*TSADRW
Trigger: CCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCC...GGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTCTCCTTCTTGCTCATaGCGAACTTGTAGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLSPSCS*RTCSGQ
Trigger: TTGGCCACTACAAGTTCGGCATGAGCAAGAAGGAGA...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACACCACTGCGTCCACCTaGTCCATCTCCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNTTAST*SISFLL
Trigger: GAGCAAGAAGGAGATGGAGCAGGTGGACGCAGTGGT...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGGCTGTCGATGCTGCTaGCTGAGGAGAACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEGCRCC*LRRTWC
Trigger: GCACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCC...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCCCGGGTCCTGCTTCCTaGTCAGGTTTTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLPGPAS*SGFGLE
Trigger: TTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGG...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACTCGAAGCCCACGCTCTaGCCCTCATCTAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHSKPTL*PSSRLD
Trigger: GTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGA...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTGCACATCCTTGTCTATaGGGTGCAGGTTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFAHPCL*GAGLRP
Trigger: TGGCCTTAAACCTGCACCGCATAGACAAGGATGTGC...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp ACTCACGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTTTGCGGTCACACCTCTaGACATCCTTGTCTATGCGG +
Preference number: 4 (lower is better)
Translates to: THGQQGWTMGWSGPQTGCLRSHL*TSLSMR
Trigger: CCGCATAGACAAGGATGTGCAGAGGTGTGACCGCAA...ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCGTCCCCCAAGGCAGCTaGTCCCTGAGGCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGVPQGS*SLRLTP
Trigger: AGGGGTCAGCCTCAGGGAGCAGCTGCCTTGGGGGAC...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACGGGCAAGGCCTAGCCTaGATGTGTTGGGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHGQGLA*MCWGRG
Trigger: TCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCC...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCAAATGCAGAAAGTCTaGCAGACTTTGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLQMQKV*QTLVAA
Trigger: AGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTG...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCATAAAGCAATGATGTaGCTGCTGTCTTCATGCACA +
Preference number: 4 (lower is better)
Translates to: PRPGGRSYALPGTPAYTAHKAMM*LLSSCT
Trigger: TGTGCATGAAGACAGCAGCCACATCATTGCTTTATG...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCGTCCCATTCATGAGCTaGTTGGGGGTCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGVPFMS*LGVHFR
Trigger: TCTGAAGTGGACCCCCAACCAGCTCATGAATGGGAC...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGATTTTGCTGGTGGCAGTaGATGCACACGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGFCWWQ*MHTTWL
Trigger: CAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAA...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTTTTGCTGGTGGCAGTaGATGCACACGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNFCWWQ*MHTTWL
Trigger: CAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAA...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCCGCTCTTTTGCTGGTaGCAGTGGATGCACACGACC +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEPLFCW*QWMHTT
Trigger: GGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCAGGTGTCCTCCCTGTaGGAAATGCAGCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHQVSSL*EMQRRP
Trigger: AGGCCGCCGCTGCATTTCCCACAGGGAGGACACCTG...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGTTCCCCTTCCCTTGCTaGGTCCACAGCGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLFPFPC*VHSGGS
Trigger: AGAGCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAA...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTTTCGTTTCCGTAGCTTaGGGAACACTTTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RSYALPGTPAYTAPPRGFFVSVA*GTLSPS
Trigger: GGAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAA...AAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp AGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCGGAACACATAGTCGGTaGCCCGCCCCGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: RASAPVAFQIIHWQKHHFGTHSR*PAPCPS
Trigger: AGATGGGCACGGGGCGGGCCACCGACTATGTGTTCC...GAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCGCTGGGGGTTGCATGTaGGGAGCTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGAGGCM*GAAGGA
Trigger: TGCTCCTCCAGCAGCTCCCCACATGCAACCCCCAGC...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCGGGGGCCGGTCAGGTaGGATAACGCTATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLRGPVR*DNAMVH
Trigger: GTGCACCATAGCGTTATCCCACCTGACCGGCCCCCG...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTAGAACTTGGTGCGTGTaGCTGGGTGGGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLRTWCV*LGGPPA
Trigger: AGCGGGAGGCCCACCCAGCCACACGCACCAAGTTCT...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCCCGATGAGATGTGCCTaGCTGCCCAGATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSPMRCA*LPRSPP
Trigger: GGGAGGTGATCTGGGCAGCCAGGCACATCTCATCGG...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACCGACAGAGTCACCCTaGGATTCCTCAGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGPTESP*DSSEQV
Trigger: CACTTGCTCTGAGGAATCCCAGGGTGACTCTGTCGG...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ACTCACGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTCTCAGGGACATaGCAGATGTCTGCGACAGAT +
Preference number: 4 (lower is better)
Translates to: THGQQGWTMGWSGPQTGCAVSGT*QMSATD
Trigger: ATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC...ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCGAGCTATGCCCTTCCTaGCACCCCCGCATACACAGC +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSELCPS*HPRIHS
Trigger: GCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTC...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGAAACAAGGATGGACAATaGGGTGGTCTGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGNKDGQ*GGLAPR
Trigger: TCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTT...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCACGGACAACAAGGATaGACAATGGGGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNHGQQG*TMGWSG
Trigger: GCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CAA 72 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTaGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQT*VAAGLGPSPGQ
Trigger: CTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
3UTR CAA 72 bp GAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTaGGTGGAGGCCAAGGACTCACGGACAACAAGGATG +
Preference number: 4 (lower is better)
Translates to: ESLRQAHNGHTC*VEAKDSRTTRM
Trigger: CATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACCCAGAACTTTCTCGATaGGCGCCGTGCGTACCCATA +
Preference number: 4 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHPELSR*APCVPI
Trigger: TATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGG...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCGTCGATGCTGCTGCCTaGGGAGAACTTGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSVDAAA*GELGAC
Trigger: ACACGCACCAAGTTCTCCTCAGGCAGCAGCATCGAC...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACCCCTCTGCTTGTTGCTaGAGCTCCTGTACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHPSACC*SSCTLW
Trigger: CCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGG...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGTTTTCCGCCAGGTATTaGACGACCTTGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: ALLLVAVDAHDLAEGHHEFSARY*TTLSRT
Trigger: AGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAA...CTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTTTTTCCGCCAGGTATTaGACGACCTTGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPFSARY*TTLSRT
Trigger: AGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAA...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGGGCTCTCGTAGTACTTGCTaGAGTTTTCCGCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: LLLVAVDAHDLAEGHHEGSRSTC*SFPPGI
Trigger: AATACCTGGCGGAAAACTGCAGCAAGTACTACGAGA...GCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTTATCCACGGAGCGAATaGTGCTTCGTTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGIYPRSE*CFVSVA
Trigger: AGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATA...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTATTGAGAGCATCGCGTaGAGTTTATCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPIESIA*SLSSSS
Trigger: GGAAGAGGAGGATAAACTGCACGCGATGCTCTCAAT...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268989.8
CDS-3UTR GCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATTGCATGTGGGGAGCTaGTGGAGGAGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKALHVGS*WRSRRG
Trigger: GCCTCTCCTGCTCCTCCAGCAGCTCCCCACATGCAA...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCCGGGACACGATCTaGCTCTTCATACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEARDTI*LFILSH
Trigger: GTGTGAGAGTATGAAGAGGCAGATCGTGTCCCGGGC...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCACTGCTGGTACCTTGCTaGCACCACTGCGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKALLVPC*HHCVHL
Trigger: CAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAG...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCCGTGGCTGTCGATGCTaGTGCCTGAGGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: VSQMQKVCQTLVAAGLGPRGCRC*CLRRTW
Trigger: CCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACG...GGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CAGAAGGGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGAGGCCACGGAGTAATTaGGAGAGGAGGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QKGCGALCHVSQMQKVCQRPRSN*ERRAVL
Trigger: CAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCT...CTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTAGGCTTGACTGGATaGCCGAGGCCACGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPLGLTG*PRPRSN
Trigger: ATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAG...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTCCTTGTCTATGCGGTaGAGGTTTAAGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGSLSMR*RFKATV
Trigger: CACTGTGGCCTTAAACCTGCACCGCATAGACAAGGA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCTTGCGGTCACACCTCTaGACATCCTTGTCTATGCGG +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCILRSHL*TSLSMR
Trigger: CCGCATAGACAAGGATGTGCAGAGGTGTGACCGCAA...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCCCAGCAGATCGCACATaGCCTGCACATAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSPADRT*PAHSPR
Trigger: ACGTGGGCTATGTGCAGGGCATGTGCGATCTGCTGG...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTACAATATACTGGGACTaGAAAGGGACCCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RTTRMDNGVVWPPDRLCSTIYWD*KGTLRR
Trigger: CCTTCTGAGGGTCCCTTTGCAGTCCCAGTATATTGT...ACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTATTCCTCAGAGCAAGTaGTCCGGTCGCATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGIIPQSK*SGRIPD
Trigger: ATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCGACAGATAATGGGCTaGCCTCGAACTGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTERQIMG*PRTEAC
Trigger: ACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp TCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGTGGGGGCAGGAGCTATaGCCTTCCTGGCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: SRSSTGKSITSYTWFSGKWGQEL*PSWHPR
Trigger: GCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCA...CTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTACGCACCGTGGACAGGTaGCGGCAGTGTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLRTVDR*RQCASQ
Trigger: CTGGCTGGCACACTGCCGCCACCTGTCCACGGTGCG...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTGGCTGCAGGTGGCAGTaGGGCTACTCCCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLGCRWQ*GYSQMC
Trigger: ACACATCTGGGAGTAGCCCCACTGCCACCTGCAGCC...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCGCAGTCTCAGGGACATaGCAGATGTCTGCGACAGAT +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIAVSGT*QMSATD
Trigger: ATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR CCA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATGAGCTATGCCCTTCCTaGCACCCCCGCATACACAGC +
Preference number: 4 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHELCPS*HPRIHS
Trigger: GCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTC...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTGCCACACGTGCTTGGTaGAGGCCAAGGACTCACGGA +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLATRAW*RPRTHG
Trigger: TCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGC...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACAAGGCAGGCACACAATaGCCACACGTGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LCSSQNHGVTKAGTQWPHKAGTQ*PHVLGG
Trigger: TCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTT...GTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGATCACTTCTTACACGTaGTTTTCAGGGAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRITSYT*FSGKYL
Trigger: AAGGTACTTCCCTGAAAACCACGTGTAAGAAGTGAT...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572925.1
CDS-3UTR TCA 90 bp GATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCACAGCAGTTTCTCTTTaGCTGCGTCCTCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DSSEQVLRSHSRSSTGKSTAVSL*LRPLRC
Trigger: GCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGT...GCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGTGCACACGACCTGGCTaGAGGGCACCACGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLCTRPG*RAPRGH
Trigger: ATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCA...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCTTCCAGATCATCCACTaGGATAAACACATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGFQIIH*DKHIVA
Trigger: AGCAACGATGTGTTTATCTCAGTGGATGATCTGGAA...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGAGAGGAGGGCAGTCCTaGGTCTGGAGAGTCGAACTC +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLRGGQS*VWRVEL
Trigger: GAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCT...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTGATCATTGTCGAGGGTaGCCAGGAGAGGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PVAFQIIHWQKHHFLHVVDHCRG*PGEAPA
Trigger: TGCTGGCGCCTCTCCTGGTCACCCTCGACAATGATC...AACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACTGTTGTTGTCACGGATaGTCTCTCGGTAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHCCCHG*SLGRPP
Trigger: TGGAGGCCTACCGAGAGATCATCCGTGACAACAACA...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTTCTGAGGGGAGGCTGTaGCCGGATTCTTCCCCGACA +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGSEGRL*PDSSPT
Trigger: TGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGA...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTTGGCTGCTGTCTTCATaGACAAACTTCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGIWLLSS*TNFLVT
Trigger: TGTCACCAGGAAGTTTGTGCATGAAGACAGCAGCCA...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCTGGCTGCTGTCTTCATaGACAAACTTCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PWDSSEQVLRSHSRSSTGWLLSS*TNFLVT
Trigger: TGTCACCAGGAAGTTTGTGCATGAAGACAGCAGCCA...GCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTCTGCCATCTTGTCACTaGGCAGGAAGCCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGLPSCH*AGSQRH
Trigger: GTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAG...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTGCAGTTCTCGTAGTACTTGCTaGAGTTTTCCGCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: RTTRMDNGVVWPPDRLCSSRSTC*SFPPGI
Trigger: AATACCTGGCGGAAAACTGCAGCAAGTACTACGAGA...ACTGCACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACAGGGTCTGCCAGCAGTaGCTCCTTCTCGTAGTACTT +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHRVCQQ*LLLVVL
Trigger: AAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCT...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATGTCCGTGAGTTCTGGTaGAGGGACTCCACACACTCG +
Preference number: 4 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHVREFW*RDSTHS
Trigger: CGAGTGTGTGGAGTCCCTGCACCAGAACTCACGGAC...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GTCCCAGTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGATATCCTCCTTCGGCTaGACCAGCACGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VPVNALFQLGVPQSPIHEISSFG*TSTWFL
Trigger: CAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATAT...CTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGATATCCTCCTTCGGCTaGACCAGCACGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEISSFG*TSTWFL
Trigger: CAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATAT...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCGGATCTCGTGCTCTATaGCTCCGTAGTAAACTTGCC +
Preference number: 4 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLGSRAL*LRSKLA
Trigger: GGCAAGTTTACTACGGAGGCATAGAGCACGAGATCC...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AAGGCAGAGCTAGCCTTGCTTCTCACCAGGGACAGATGGGGACACCCATGCATCGGATCTCGTGCTCTATaGCTCCGTAGTAAACTTGCC +
Preference number: 4 (lower is better)
Translates to: KAELALLLTRDRWGHPCIGSRAL*LRSKLA
Trigger: GGCAAGTTTACTACGGAGGCATAGAGCACGAGATCC...GATGCATGGGTGTCCCCATCTGTCCCTGGTGAGAAGCAAGGCTAGCTCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCCAAGGATCTCCTTCTTGCTCATaGCGAACTTGTAGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GVTKAGTQWPHVLGGGQGSPSCS*RTCSGQ
Trigger: TTGGCCACTACAAGTTCGGCATGAGCAAGAAGGAGA...TCCTTGGCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCAAGGCCACGGAGTAATTaGGAGAGGAGGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKARPRSN*ERRAVL
Trigger: CAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCT...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCTTGCGGTCACACCTCTaGACATCCTTGTCTATGCGG +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIILRSHL*TSLSMR
Trigger: CCGCATAGACAAGGATGTGCAGAGGTGTGACCGCAA...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTGGGCAAGGCCTAGCCTaGATGTGTTGGGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QSKCSGRIPDHPLAKASLGQGLA*MCWGRG
Trigger: TCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCC...AAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp CTTGTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCTGCTCTGTTTCCATCTaGTCTGCTAGATTCTTGACA +
Preference number: 4 (lower is better)
Translates to: LVDEVPGNPQDLLGIVMLCSVSI*SARFLT
Trigger: TGTCAAGAATCTAGCAGAGCAGATGGAAACAGAGCA...GAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CCA 90 bp GCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCCATAAAGCAATGATGTaGCTGCTGTCTTCATGCACA +
Preference number: 4 (lower is better)
Translates to: AQACHRSFAGGSGCTRPGHKAMM*LLSSCT
Trigger: TGTGCATGAAGACAGCAGCCACATCATTGCTTTATG...GCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp CCAGTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGGTCCCATTCATGAGCTaGTTGGGGGTCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: PVNALFQLGVPQSPIHELVPFMS*LGVHFR
Trigger: TCTGAAGTGGACCCCCAACCAGCTCATGAATGGGAC...CAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTTGGATGCACACGACCTaGCTGAAGGGCACCACGAGG +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGWMHTT*LKGTTR
Trigger: CCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCA...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGATTCGTTTCCGTAGCTTaGGGAACACTTTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGFVSVA*GTLSPS
Trigger: GGAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAA...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTGCAGCTACAGTGGCTaGGGGTTGCATGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVAFQIIHWQKHHFLHVVCSYSG*GLHVGS
Trigger: GCTCCCCACATGCAACCCCCAGCCACTGTAGCTGCA...AACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTACCCCAGGTTCACTCGTaGGCAGCAGTCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLPQVHS*AAVQAA
Trigger: CGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGG...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAGCACGCACAATATACTaGGACTGCAAAGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPARTIY*DCKGTL
Trigger: GAGGGTCCCTTTGCAGTCCCAGTATATTGTGCGTGC...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGTGCAGAACGCAAGGGTaGGGTGGCAGGAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SCFSNAESLPDFGGCWTRCRTQG*GGRSEA
Trigger: AGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA...CCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTATCACTTCTTACACGTaGTTTTCAGGGAAGTACCTA +
Preference number: 4 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGITSYT*FSGKYL
Trigger: TAGGTACTTCCCTGAAAACCACGTGTAAGAAGTGAT...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
3UTR CAA 72 bp ACCCGTGACGTGTGCCTAAACCAGAAGCAGTTTTGGTaGCTCCAGCTGGGGCTGGTGCACGCACAATATACT +
Preference number: 4 (lower is better)
Translates to: TRDVCLNQKQFW*LQLGLVHAQYT
Trigger: AGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTTAGGCACACGTCACGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTCTTCCCCACCTTGGTaGACAGGGCTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGSSPPW*TGLPSC
Trigger: ACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGA...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCTACTCCCAGATGTGTaGGAGGGGAGCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHLLPDV*EGSRVG
Trigger: ACCTACTCTGCTCCCCTCTCACACATCTGGGAGTAG...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGATGGCTGCTGTCTTCATaGACAAACTTCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGWLLSS*TNFLVT
Trigger: TGTCACCAGGAAGTTTGTGCATGAAGACAGCAGCCA...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCTTTTCCGCCAGGTATTaGACGACCTTGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSFSARY*TTLSRT
Trigger: AGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAA...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTTCTCGTAGTACTTGCTaGAGTTTTCCGCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: SLRGGCDRILPRQSHPGISRSTC*SFPPGI
Trigger: AATACCTGGCGGAAAACTGCAGCAAGTACTACGAGA...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGGTTAGGGTCTGCCAGCAGTaGCTCCTTCTCGTAGTACTT +
Preference number: 4 (lower is better)
Translates to: VNALFQLGVPQSPIHELVRVCQQ*LLLVVL
Trigger: AAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCT...AACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR GCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCGTGCCACCGCTCTTTTaGTGGTGGCAGTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGVPPLF*WWQWMH
Trigger: GTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCTCCTTGTCTATGCGGTaGAGGTTTAAGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIISLSMR*RFKATV
Trigger: CACTGTGGCCTTAAACCTGCACCGCATAGACAAGGA...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCGCACATCCTTGTCTATaGGGTGCAGGTTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIIAHPCL*GAGLRP
Trigger: TGGCCTTAAACCTGCACCGCATAGACAAGGATGTGC...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACGCACATCCTTGTCTATaGGGTGCAGGTTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASWHPEKHVEGRASLASHAHPCL*GAGLRP
Trigger: TGGCCTTAAACCTGCACCGCATAGACAAGGATGTGC...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGAACAATATACTGGGACTaGAAAGGGACCCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGTIYWD*KGTLRR
Trigger: CCTTCTGAGGGTCCCTTTGCAGTCCCAGTATATTGT...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATAGAAGCAGTTTTGGTTaGTCCAGCTGGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHRSSFG*SSWGWC
Trigger: GCACCAGCCCCAGCTGGAGCAACCAAAACTGCTTCT...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAATTCCTCAGAGCAAGTaGTCCGGTCGCATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPIPQSK*SGRIPD
Trigger: ATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR GCA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGGCAAGGCCTAGCCTaGATGTGTTGGGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGGQGLA*MCWGRG
Trigger: TCCTCTACCCCAACACATGCAGGCTAGGCCTTGCCC...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTAAATCATACACACTCTaGTCCTCACAAAACCACGGA +
Preference number: 4 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPKSYTL*SSQNHG
Trigger: TCCGTGGTTTTGTGAGGAGCAGAGTGTGTATGATTT...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp AAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGTACCTAATGCAGAACGCACGCACCGTGGACAGGTaGCGGCAGTGTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KSITSYTWFSGKYLMQNARTVDR*RQCASQ
Trigger: CTGGCTGGCACACTGCCGCCACCTGTCCACGGTGCG...TGCGTTCTGCATTAGGTACTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGTCTGCCAACACCTGCTaGTACCTTGCTGCCACCACT +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLSANTC*YLAATT
Trigger: AGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGA...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCTGCCAACACCTGCTaGTACCTTGCTGCCACCACT +
Preference number: 4 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKASANTC*YLAATT
Trigger: AGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGA...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACACTTGGTGCGTGTGGCTaGGTGGGCCTCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTLGACG*VGLPLP
Trigger: CGGGAGCGGGAGGCCCACCCAGCCACACGCACCAAG...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCAAAGTGGGTGTCCATaGCACCCCCGTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGQSGCP*HPRWGS
Trigger: ACTTCCCCAACGGGGGTGCCATGGACACCCACTTTG...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGACGGCTGCTGCCTCCTaGCCCCAGCTCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLTAAAS*PQLTCS
Trigger: AGAACAAGTGAGCTGGGGCCAGGAGGCAGCAGCCGT...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGGGCTGCAGGTGGCAGTaGGGCTACTCCCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: SCFSNAESLPDFGGCWTRGCRWQ*GYSQMC
Trigger: ACACATCTGGGAGTAGCCCCACTGCCACCTGCAGCC...CCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCCGACAGAGTCACCCTaGGATTCCTCAGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: FLRASAPVAFQIIHWQKHPTESP*DSSEQV
Trigger: CACTTGCTCTGAGGAATCCCAGGGTGACTCTGTCGG...ATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTATCACTTCTTACACGTaGTTTTCAGGGAAGTACCAT +
Preference number: 4 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPITSYT*FSGKYH
Trigger: ATGGTACTTCCCTGAAAACCACGTGTAAGAAGTGAT...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574563.5
CDS-3UTR TCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGCCAGAGTCCCATTCATaGGCTGGTTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLPESHS*AGWGST
Trigger: AGTGGACCCCCAACCAGCTCATGAATGGGACTCTGG...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGTTGTTGTCACGGATaGTCTCTCGGTAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGPFVMFLKCRKSARLWCCCHG*SLGRPP
Trigger: TGGAGGCCTACCGAGAGATCATCCGTGACAACAACA...CCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCATCTCCTGGGCATCGTaGTGCTCAGCACGTTCATTG +
Preference number: 4 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGISWAS*CSARSL
Trigger: CAATGAACGTGCTGAGCATCACGATGCCCAGGAGAT...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCCAGTTTCTCTTTGACTaGGTCCTCTGCGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGQFLFD*VLCAAH
Trigger: ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTG...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGCAGAGTCAGGCTCTCTaGAGACTGGTGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLQSQAL*RLVQGE
Trigger: CTCTCCCTGCACCAGTCTGCAGAGAGCCTGACTCTG...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCGCCCGGGACACGATCTaGCTCTTCATACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGARDTI*LFILSH
Trigger: GTGTGAGAGTATGAAGAGGCAGATCGTGTCCCGGGC...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCTCTCCTTCTTGCTCATaGCGAACTTGTAGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RVTLGFLRASAPVAFQIISPSCS*RTCSGQ
Trigger: TTGGCCACTACAAGTTCGGCATGAGCAAGAAGGAGA...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAGCTCCATCTCCTTCTTaGTCATGCCGAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPAPSPS*SCRTCS
Trigger: ACTACAAGTTCGGCATGAGCAAGAAGGAGATGGAGC...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAAACTCCACGGAATGCTaGTGCTCCACCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLNSTEC*CSTTAV
Trigger: CACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTT...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTCTAGGCTTGACTGGATaGCCGAGGCCACGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: PVAFQIIHWQKHHFLHVVLGLTG*PRPRSN
Trigger: ATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAG...AACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGCGCACCCGTGACGTGTaGCTAAACCAGAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: AAGPFVMFLKCRKSARLWRTRDV*LNQKQF
Trigger: AAACTGCTTCTGGTTTAGGCACACGTCACGGGTGCG...CCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCAAATGCAGAAAGTCTaGCAGACTTTGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEQMQKV*QTLVAA
Trigger: AGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACAAATGCAGAAAGTCTaGCAGACTTTGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPQMQKV*QTLVAA
Trigger: AGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTG...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp TCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCACCGCTCTTTTGCTaGTGGCAGTGGATGCACACG +
Preference number: 4 (lower is better)
Translates to: SCFSNAESLPDFGGCWTRPPLFC*WQWMHT
Trigger: CGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG...CCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAACGGCTGCTGCCTCCTaGCCCCAGCTCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLTAAAS*PQLTCS
Trigger: AGAACAAGTGAGCTGGGGCCAGGAGGCAGCAGCCGT...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGCACGCACAATATACTaGGACTGCAAAGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLARTIY*DCKGTL
Trigger: GAGGGTCCCTTTGCAGTCCCAGTATATTGTGCGTGC...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGTTCCAGATCATCCACTaGCAAAAGCATCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLFQIIH*QKHHFL
Trigger: TAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAA...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
ENST00000574563.5
CDS-3UTR TCA 90 bp TCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGCCAGAGTCCCATTCATaGGCTGGTTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: SRSSTGKSITSYTWFSGKPESHS*AGWGST
Trigger: AGTGGACCCCCAACCAGCTCATGAATGGGACTCTGG...CTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTTCCAGATCATCCACTaGGATAAACACATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNFQIIH*DKHIVA
Trigger: AGCAACGATGTGTTTATCTCAGTGGATGATCTGGAA...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR TCA 90 bp TCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGAGAGGAGGGCAGTCCTaGGTCTGGAGAGTCGAACTC +
Preference number: 4 (lower is better)
Translates to: SRSSTGKSITSYTWFSGKRGGQS*VWRVEL
Trigger: GAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCT...CTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCATCTCGTAGTACTTGCTaGAGTTTTCCGCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPSRSTC*SFPPGI
Trigger: AATACCTGGCGGAAAACTGCAGCAAGTACTACGAGA...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR GCA 90 bp TCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGAGGGCCAGACGTCCTTaGGGATCTCGTGCTCTATGC +
Preference number: 4 (lower is better)
Translates to: SRSSTGKSITSYTWFSGKRARRP*GSRALC
Trigger: GCATAGAGCACGAGATCCGCAAGGACGTCTGGCCCT...CTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGTTCTCTATGAGCATCTaGACCTTGTGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLFSMSI*TLWTRS
Trigger: GGACCTCGTCCACAAGGTGCAGATGCTCATAGAGAA...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTACTCTGGATGCCATCCTaGCTCACCAGCACAAGCGTG +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLLWMPS*LTSTSV
Trigger: CACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAG...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGTGCTCCAGCTGGGGCTaGTGCACGCACAATATACTG +
Preference number: 4 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLCSSWG*CTHNIL
Trigger: CAGTATATTGTGCGTGCACCAGCCCCAGCTGGAGCA...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ACTCACGGACAACAAGGATGGACAATGGGGTGGTCTGGCCCCCAGACAGGCTGTTTCCAGATCATCCACTaGCAAAAGCATCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: THGQQGWTMGWSGPQTGCFQIIH*QKHHFL
Trigger: TAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAA...ACAGCCTGTCTGGGGGCCAGACCACCCCATTGTCCATCCTTGTTGTCCGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGCCCTCTGCTTGTTGCTaGAGCTCCTGTACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SRSSTGKSITSYTWFSGKPSACC*SSCTLW
Trigger: CCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGG...CTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTACTGCCCTCTGCTTGTTaGTGCAGCTCCTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLLPSAC*CSSCTL
Trigger: CAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAG...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp CCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTATCCACGGAGCGAATaGTGCTTCGTTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: PVAFQIIHWQKHHFLHVVYPRSE*CFVSVA
Trigger: AGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATA...AACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACACAGGTGTCCTCCCTGTaGGAAATGCAGCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTQVSSL*EMQRRP
Trigger: AGGCCGCCGCTGCATTTCCCACAGGGAGGACACCTG...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACAAATCTCCCCCGCCACTaGGCACGTCTTCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTNLPRH*ARLPHL
Trigger: AAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATT...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGCATAAAGCAATGATGTaGCTGCTGTCTTCATGCACA +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLHKAMM*LLSSCT
Trigger: TGTGCATGAAGACAGCAGCCACATCATTGCTTTATG...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR TCA 90 bp CCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCTTACACGTGGTTTTCCAGATCATCCACTaGGATAAACACATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PVAFQIIHWQKHHFLHVVFQIIH*DKHIVA
Trigger: AGCAACGATGTGTTTATCTCAGTGGATGATCTGGAA...AACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp GGCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGTTCCAGATCATCCACTaGCAAAAGCATCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: GCGALCHVSQMQKVCQTLFQIIH*QKHHFL
Trigger: TAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAA...CAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CCA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTTCCAGATCATCCACTaGCAAAAGCATCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGFQIIH*QKHHFL
Trigger: TAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAA...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR GCA 90 bp AAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGTACCTAATGCAGAACGCATCCTTGTCTATGCGGTaGAGGTTTAAGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KSITSYTWFSGKYLMQNASLSMR*RFKATV
Trigger: CACTGTGGCCTTAAACCTGCACCGCATAGACAAGGA...TGCGTTCTGCATTAGGTACTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACATCTGAGTCCAGGATCTaGATGAGGGAGCGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTSESRI*MRERML
Trigger: CAACATGCGCTCCCTCATCCAGATCCTGGACTCAGA...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR GCA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACAGGATCTCGTGCTCTATaGCTCCGTAGTAAACTTGCC +
Preference number: 4 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTGSRAL*LRSKLA
Trigger: GGCAAGTTTACTACGGAGGCATAGAGCACGAGATCC...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CCA 90 bp TGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTACATAAAGCAATGATGTaGCTGCTGTCTTCATGCACA +
Preference number: 4 (lower is better)
Translates to: CHVSQMQKVCQTLVAAGLHKAMM*LLSSCT
Trigger: TGTGCATGAAGACAGCAGCCACATCATTGCTTTATG...TAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS GCA 90 bp GAGGAGGAGCCGCAGCCCAGCAGCCGTCAGTGGGTGCCCTGTCCCTaGCTGCCACCTGGACAGAGTGCTGTGGGGCCCCCGCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: EEEPQPSSRQWVPCP*LPPGQSAVGPPPGP
Trigger: GGGGCCAGGCGGGGGCCCCACAGCACTCTGTCCAGGTGGCAGGCAGGGACAGGGCACCCACTGACGGCTGCTGGGCTGCGGCTCCTCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS CCA 90 bp CACGTCCTTGGTGAGGCCCGCGGAGGCCCCCGGGGGCCGGTCAGGTaGGATAACGCTATGGTGCACCAGCGCCGACAGGTGGGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: HVLGEARGGPRGPVR*DNAMVHQRRQVGPH
Trigger: GTGCGGACCCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACCTGACCGGCCCCCGGGGGCCTCCGCGGGCCTCACCAAGGACGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS CCA 90 bp CACAGCAGTTTCTCTTTGACTGCGTCCTCTGCGCTGCCCATGGTGTaGCAGGAGGCGGCGCCGAGCGGTCCTCAGAGCCCCCGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: HSSFSLTASSALPMV*QEAAPSGPQSPRAL
Trigger: GAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572875.1
ENST00000573062.5
ENST00000574563.5
CDS CCA 90 bp GTCAGTGGGTGCCCTGTCCCTGCCTGCCACCTGGACAGAGTGCTGTaGGGCCCCCGCCTGGCCCCCAACCACCCAGGGATCTTGGTCAAC +
Preference number: 5 (lower is better)
Translates to: VSGCPVPACHLDRVL*GPRLAPNHPGILVN
Trigger: GTTGACCAAGATCCCTGGGTGGTTGGGGGCCAGGCGGGGGCCCCACAGCACTCTGTCCAGGTGGCAGGCAGGGACAGGGCACCCACTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS TCA 90 bp ACAAGCGTGCCACCGCTCTCTGGGGGTGAACGTGGAGAGTGCGGCTaGGGCCCTCTCGTCGGCTATCACACCCTGCTGGCCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: TSVPPLSGGERGECG*GPLVGYHTLLASAP
Trigger: GGGGGCACTGGCCAGCAGGGTGTGATAGCCGACGAGAGGGCCTCAGCCGCACTCTCCACGTTCACCCCCAGAGAGCGGTGGCACGCTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CCA 90 bp GTGGAGAGTGCGGCTGAGGCCCTCTCGTCGGCTATCACACCCTGCTaGCCAGTGCCCCCAGGCTGGGTAGGAGGCAGATGGCTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: VESAAEALSSAITPC*PVPPGWVGGRWLGY
Trigger: GTAGCCCAGCCATCTGCCTCCTACCCAGCCTGGGGGCACTGGCCAGCAGGGTGTGATAGCCGACGAGAGGGCCTCAGCCGCACTCTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 90 bp TGCTGCTCCACCACGGCGGTGCCCGGAGTCCCGGGTCCTGCTTCCTaGTCAGGTTTTGGTCTGGAATCTTCAGGGTCCTGGGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: CCSTTAVPGVPGPAS*SGFGLESSGSWGSG
Trigger: CCCGGAGCCCCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp GAGGGCAGTCCTGAGTCTGGAGAGTCGAACTCCACGGAATGCTGCTaGTCCACCACGGCGGTGCCCGGAGTCCCGGGTCCTGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: EGSPESGESNSTECC*STTAVPGVPGPASC
Trigger: GCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp GAGGAGGGCAGTCCTGAGTCTGGAGAGTCGAACTCCACGGAATGCTaGTGCTCCACCACGGCGGTGCCCGGAGTCCCGGGTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: EEGSPESGESNSTEC*CSTTAVPGVPGPAS
Trigger: GGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp CGAGAGGAGGGCAGTCCTGAGTCTGGAGAGTCGAACTCCACGGAATaGTGCTGCTCCACCACGGCGGTGCCCGGAGTCCCGGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: REEGSPESGESNSTE*CCSTTAVPGVPGPA
Trigger: AGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAACACCTGCTGGTACCTaGCTGCCACCACTGCGTCCA +
Preference number: 5 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPTPAGT*LPPLRP
Trigger: TGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGT...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS GCA 90 bp CATGGGGGAAGCGTGCACCAGGCCCTCCCCTTCAGGAGCTGGGCCTaGACTGGACCTTGGGTCCTGAGTCTCAGACTCAAGACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: HGGSVHQALPFRSWA*TGPWVLSLRLKTGL
Trigger: GAGGCCCGTCTTGAGTCTGAGACTCAGGACCCAAGGTCCAGTGCAGGCCCAGCTCCTGAAGGGGAGGGCCTGGTGCACGCTTCCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 90 bp GGGAAGCGTGCACCAGGCCCTCCCCTTCAGGAGCTGGGCCTGCACTaGACCTTGGGTCCTGAGTCTCAGACTCAAGACGGGCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GKRAPGPPLQELGLH*TLGPESQTQDGPQG
Trigger: ACCCTGAGGCCCGTCTTGAGTCTGAGACTCAGGACCCAAGGTCCAGTGCAGGCCCAGCTCCTGAAGGGGAGGGCCTGGTGCACGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 90 bp AAGGACAGACGGACACACACGTGGCTGGACACGCTAACGGGAAGCTaGGGCCGAGCGCTGCCCACTCACCGGTCGGGGATGCAGCTACAG +
Preference number: 5 (lower is better)
Translates to: KDRRTHTWLDTLTGS*GRALPTHRSGMQLQ
Trigger: CTGTAGCTGCATCCCCGACCGGTGAGTGGGCAGCGCTCGGCCCCAGCTTCCCGTTAGCGTGTCCAGCCACGTGTGTGTCCGTCTGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp GGAGGAGGACGAGGAGTCTTACAGGCCCCACGCACAGTGCACAGCTaGCAGAAGGCAGCCTCTCCCTTCCCACCCGAGCCGAGGACAAGG +
Preference number: 5 (lower is better)
Translates to: GGGRGVLQAPRTVHS*QKAASPFPPEPRTR
Trigger: CCTTGTCCTCGGCTCGGGTGGGAAGGGAGAGGCTGCCTTCTGCCAGCTGTGCACTGTGCGTGGGGCCTGTAAGACTCCTCGTCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS-3UTR CAA 90 bp CTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCGACGCGCTGCCGCTaGAGTGCCGTTTCCGGATCC +
Preference number: 5 (lower is better)
Translates to: LAPPHTQLLQGGFWVPRPPTRCR*SAVSGS
Trigger: GGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGG...AGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCCGACGCGCTGCCGCTaGAGTGCCGTTTCCGGATCC +
Preference number: 5 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLPTRCR*SAVSGS
Trigger: GGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGG...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCTTGCTCCACACGTCCTaGGTGAGGCCCGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGLLHTS*VRPAEA
Trigger: GGCCTCCGCGGGCCTCACCAAGGACGTGTGGAGCAA...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCACTGCCTGAGGAGAACTaGGTGCGTGTGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAALPEEN*VRVAGW
Trigger: CCACCCAGCCACACGCACCAAGTTCTCCTCAGGCAG...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACTGCCTGAGGAGAACTaGGTGCGTGTGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTLPEEN*VRVAGW
Trigger: CCACCCAGCCACACGCACCAAGTTCTCCTCAGGCAG...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS TCA 90 bp ACTTTCTCGATGAGCGCCGTGCGTACCCATACGTGTTTCAAGGCCTaGGGGCTGAGGGCCGGGGCCTTCCCGCTGGCTGAGCCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: TFSMSAVRTHTCFKA*GLRAGAFPLAEPCL
Trigger: GAGACAGGGCTCAGCCAGCGGGAAGGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGTATGGGTACGCACGGCGCTCATCGAGAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
ENST00000574650.1
CDS GCA 90 bp CGCTGCCTCACCACCACCTCGCAGGCCTTCCACTCTGCCAACACCTaGTGGTACCTTGCTGCCACCACTGCGTCCACCTGCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: RCLTTTSQAFHSANT*WYLAATTASTCSIS
Trigger: GGAGATGGAGCAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp GGAATGCTGCTGCTCCACCACGGCGGTGCCCGGAGTCCCGGGTCCTaGTTCCTGCTCAGGTTTTGGTCTGGAATCTTCAGGGTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GMLLLHHGGARSPGS*FLLRFWSGIFRVLG
Trigger: CCCCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp CTGGAGAGTCGAACTCCACGGAATGCTGCTGCTCCACCACGGCGGTaGCCGGAGTCCCGGGTCCTGCTTCCTGCTCAGGTTTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LESRTPRNAAAPPRR*PESRVLLPAQVLVW
Trigger: CCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp TGCGTCCACCTGTACTCAGACCACACCACGACCATGGGGGAAGCGTaGACCAGGCCCTCCCCTTCAGGAGCTGGGCCTGCACTGGACCTT +
Preference number: 5 (lower is better)
Translates to: CVHLYSDHTTTMGEA*TRPSPSGAGPALDL
Trigger: AAGGTCCAGTGCAGGCCCAGCTCCTGAAGGGGAGGGCCTGGTGCACGCTTCCCCCATGGTCGTGGTGTGGTCTGAGTACAGGTGGACGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 90 bp ACCCTCCAGCTGTGTGCGGGGCAGAGGTGGGGGCCTCCACACCTCTaGTCAGGGCAGCCTGGATGGCTGGACCAGCTCGTACCATTGAAA +
Preference number: 5 (lower is better)
Translates to: TLQLCAGQRWGPPHL*SGQPGWLDQLVPLK
Trigger: TTTCAATGGTACGAGCTGGTCCAGCCATCCAGGCTGCCCTGAGCAGAGGTGTGGAGGCCCCCACCTCTGCCCCGCACACAGCTGGAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CAA 90 bp GGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGCACGTCTTCCCCACCTaGGTGAACAGGGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: GGRSYALPGTPAYTAPPRHVFPT*VNRAAI
Trigger: GATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTG...CCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACAACACCTGCTGGTACCTaGCTGCCACCACTGCGTCCA +
Preference number: 5 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTTPAGT*LPPLRP
Trigger: TGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGT...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACAATCATGTCACCAGCGTaGTGCTCGTGCCTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTIMSPA*CSCLWP
Trigger: CGGCCACAGGCACGAGCACAACGCTGGTGACATGAT...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCTTGACATCCCGGCCTTaGGGGAAGGGCCCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: VDEVPGNPQDLLGIVMLSLTSRP*GKGPQD
Trigger: ATCCTGGGGGCCCTTCCCCAAAGGCCGGGATGTCAA...GCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS TCA 90 bp CGATCATGTCACCAGCGTTGTGCTCGTGCCTGTGGCCGGGGTAGATaGTCCGGAACACATAGTCGGTGGCCCGCCCCGTGCCCATCTCCT +
Preference number: 5 (lower is better)
Translates to: RSCHQRCARACGRGR*SGTHSRWPAPCPSP
Trigger: AGGAGATGGGCACGGGGCGGGCCACCGACTATGTGTTCCGGATCATCTACCCCGGCCACAGGCACGAGCACAACGCTGGTGACATGATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426855.6
ENST00000574563.5
ENST00000574857.1
CDS TCA 90 bp CTGTGCTGCCCGCTCGGCACATGGACAGCTGTCCGTCTCAGCCGCTaGGAGCTTGGCTCAGACAAACCTCTTCACGGCCAGGCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LCCPLGTWTAVRLSR*ELGSDKPLHGQAWL
Trigger: GAGCCAAGCCTGGCCGTGAAGAGGTTTGTCTGAGCCAAGCTCTCAGCGGCTGAGACGGACAGCTGTCCATGTGCCGAGCGGGCAGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 90 bp CTGAAGCCCAGGCAAGGCCTGCTTTGGGGTGGCCACGTCCTCCCGTaGCCCAGCTCACAGTGGGATGAGATCTCGTTCTGCTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LKPRQGLLWGGHVLP*PSSQWDEISFCSPS
Trigger: GGAAGGAGAGCAGAACGAGATCTCATCCCACTGTGAGCTGGGGCACGGGAGGACGTGGCCACCCCAAAGCAGGCCTTGCCTGGGCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS GCA 90 bp CGCTGCCTCACCACCACCTCGCAGGCCTTCCACTCTGCCAACACCTaGTGGTACCTTGCTGCCACCACTGCGTCCACCTGTACTCAGACC +
Preference number: 5 (lower is better)
Translates to: RCLTTTSQAFHSANT*WYLAATTASTCTQT
Trigger: GGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 90 bp CCAGACGATGCTCCCTCAGCACCTGCCCCGTACCCACTGTGCCTGTaGTCTCAGGCTCACCTAGAAGAGAGGCCAGGATCGGGCCGAACA +
Preference number: 5 (lower is better)
Translates to: PDDAPSAPAPYPLCL*SQAHLEERPGSGRT
Trigger: TGTTCGGCCCGATCCTGGCCTCTCTTCTAGGTGAGCCTGAGAGCACAGGCACAGTGGGTACGGGGCAGGTGCTGAGGGAGCATCGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS CCA 90 bp CCAGGCCCAGCTGCAAGAGATTCTGCCGGGACCCTGGTCACTCCGTaGCATCGGCCCTGGCCTGTCAACCGCACCCACTGGCACATTTTA +
Preference number: 5 (lower is better)
Translates to: PGPAARDSAGTLVTP*HRPWPVNRTHWHIL
Trigger: TAAAATGTGCCAGTGGGTGCGGTTGACAGGCCAGGGCCGATGCCACGGAGTGACCAGGGTCCCGGCAGAATCTCTTGCAGCTGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 90 bp AGAGTCACTGTGGCTGTGCCCCATTCTTCCCTCCCTCGGGATCCCTaGGAAGACGTCCTCCAGAGCCACCTGCCGCCCAGAAGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RVTVAVPHSSLPRDP*EDVLQSHLPPRSQP
Trigger: AGGCTGACTTCTGGGCGGCAGGTGGCTCTGGAGGACGTCTTCCCAGGGATCCCGAGGGAGGGAAGAATGGGGCACAGCCACAGTGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572841.1
CDS CCA 90 bp ACAGAGGTGGGAGGATGTGAAAGACCGGGACTGTCTGGGATGGGCTaGCAGCCCAGGAGGTCATCGGCCCTCACAGAGGCTGCGCATGAC +
Preference number: 5 (lower is better)
Translates to: TEVGGCERPGLSGMG*QPRRSSALTEAAHD
Trigger: GTCATGCGCAGCCTCTGTGAGGGCCGATGACCTCCTGGGCTGCCAGCCCATCCCAGACAGTCCCGGTCTTTCACATCCTCCCACCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp AGAGAACAGAGGTGGGAGGATGTGAAAGACCGGGACTGTCTGGGATaGGCTGGCAGCCCAGGAGGTCATCGGCCCTCACAGAGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: REQRWEDVKDRDCLG*AGSPGGHRPSQRLR
Trigger: GCGCAGCCTCTGTGAGGGCCGATGACCTCCTGGGCTGCCAGCCCATCCCAGACAGTCCCGGTCTTTCACATCCTCCCACCTCTGTTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp TGTCGTGCAGGTGACACGGCCTTTAAGGACAGACGGACACACACGTaGCTGGACACGCTAACGGGAAGCTGGGGCCGAGCGCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: CRAGDTAFKDRRTHT*LDTLTGSWGRALPT
Trigger: AGTGGGCAGCGCTCGGCCCCAGCTTCCCGTTAGCGTGTCCAGCCACGTGTGTGTCCGTCTGTCCTTAAAGGCCGTGTCACCTGCACGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS-3UTR CAA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCAAAGGGCCAGACGTCCTaGCGGATCTCGTGCTCTATG +
Preference number: 5 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPKGQTS*RISCSM
Trigger: CATAGAGCACGAGATCCGCAAGGACGTCTGGCCCTT...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp GACCCCTCCCATCCCGGCCCTGATCCGAGGGCATCCTGGCCCCTGACTTGCCCTAAACCAGAAGCAGTTTaGGTTGCTCCAGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: DPSHPGPDPRASWPLTCPKPEAV*VAPAGA
Trigger: AGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTT...AGGGCAAGTCAGGGGCCAGGATGCCCTCGGATCAGGGCCGGGATGGGAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp ACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGTTCCAAATGGCCACACGTGCTaGGTGGAGGCCAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: TLVAAGLGPSPGQGLHVPNGHTC*VEAKDS
Trigger: TGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATT...TGGAACATGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS TCA 90 bp AGGCCCGGGACACGATCTGCCTCTTCATACTCTCACACAGTAGCCTaGGCGGCAACCTGTGGCAACAACCGGGCTCAGCAGGGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: RPGTRSASSYSHTVA*AATCGNNRAQQGGA
Trigger: AGCCCCTCCCTGCTGAGCCCGGTTGTTGCCACAGGTTGCCGCTCAGGCTACTGTGTGAGAGTATGAAGAGGCAGATCGTGTCCCGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS TCA 90 bp CTCCATATCCTCCTTCTACAGCGGGAGACACCGGAAGACCGACGATaGAGGGCTGAGAGGCTCTCAGGGATGGCCGGCTGCACCAGCACG +
Preference number: 5 (lower is better)
Translates to: LHILLLQRETPEDRR*RAERLSGMAGCTST
Trigger: CGTGCTGGTGCAGCCGGCCATCCCTGAGAGCCTCTCAGCCCTTCATCGTCGGTCTTCCGGTGTCTCCCGCTGTAGAAGGAGGATATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570431.1
CDS GCA 90 bp CACGTCCTCCCGTGCCCCAGCTCACAGTGGGATGAGATCTCGTTCTaGTCTCCTTCCTTAAGGGGCAGGAAATGGCGCCCGGAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: HVLPCPSSQWDEISF*SPSLRGRKWRPERG
Trigger: GCCTCTCTCCGGGCGCCATTTCCTGCCCCTTAAGGAAGGAGAGCAGAACGAGATCTCATCCCACTGTGAGCTGGGGCACGGGAGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS GCA 90 bp GGCCTTCCACTCTGCCAACACCTGCTGGTACCTTGCTGCCACCACTaGGTCCACCTGTACTCAGACCACACCACGACCATGGGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: GLPLCQHLLVPCCHH*VHLYSDHTTTMGEA
Trigger: CGCTTCCCCCATGGTCGTGGTGTGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 90 bp CACCACCTCGCAGGCCTTCCACTCTGCCAACACCTGCTGGTACCTTaGTGCCACCACTGCGTCCACCTGTACTCAGACCACACCACGACC +
Preference number: 5 (lower is better)
Translates to: HHLAGLPLCQHLLVP*CHHCVHLYSDHTTT
Trigger: GGTCGTGGTGTGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 90 bp CTTCCCTCCCTCGGGATCCCTGGGAAGACGTCCTCCAGAGCCACCTaGCGCCCAGAAGTCAGCCTTTCCACGACCCTAAGGCATGTACTG +
Preference number: 5 (lower is better)
Translates to: LPSLGIPGKTSSRAT*RPEVSLSTTLRHVL
Trigger: CAGTACATGCCTTAGGGTCGTGGAAAGGCTGACTTCTGGGCGGCAGGTGGCTCTGGAGGACGTCTTCCCAGGGATCCCGAGGGAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572841.1
CDS GCA 90 bp AGCTGGAGTCGCTTGGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTaGCCTTGGCGAGGTGGTCCTGGAAGTGAAGTGACCAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: SWSRLVEFQPLGALA*PWRGGPGSEVTRTG
Trigger: CCCAGTCCTGGTCACTTCACTTCCAGGACCACCTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp TGCCTCACCACCACCTCGCAGGCCTTCCACTCTGCCAACACCTGCTaGTACCTTGCTGCCACCACTGCGTCCACCTGCTCCATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CLTTTSQAFHSANTC*YLAATTASTCSISF
Trigger: GAAGGAGATGGAGCAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 90 bp ATCTGCCTCTTCATACTCTCACACAGTAGCCTGAGCGGCAACCTGTaGCAACAACCGGGCTCAGCAGGGAGGGGCTGCGGCCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ICLFILSHSSLSGNL*QQPGSAGRGCGPSG
Trigger: ACCAGAGGGGCCGCAGCCCCTCCCTGCTGAGCCCGGTTGTTGCCACAGGTTGCCGCTCAGGCTACTGTGTGAGAGTATGAAGAGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS CCA 90 bp CAGCCCAGGAGGTCATCGGCCCTCACAGAGGCTGCGCATGACAGCTaGCAGATGGGTCCTGATCGTTCTCTAGCTCCTCTCAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QPRRSSALTEAAHDS*QMGPDRSLAPLRLD
Trigger: GTCCAGCCTGAGAGGAGCTAGAGAACGATCAGGACCCATCTGCCAGCTGTCATGCGCAGCCTCTGTGAGGGCCGATGACCTCCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS-3UTR CAA 90 bp GCATGCCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACACAGCAGTTTCTCTTaGACTGCGTCCTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: ACLGLGAGAMPFLAPPHTHSSFS*TASSAL
Trigger: CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTG...TGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCAAGCCTCCTCCATGATTaGCTTCACCTCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPSLLHD*LHLLLH
Trigger: GTGAAGAAGGAGGTGAAGCAAATCATGGAGGAGGCT...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGACCGACGCGCTGCCGCTaGAGTGCCGTTTCCGGATCC +
Preference number: 5 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGPTRCR*SAVSGS
Trigger: GGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGG...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCATTCATGAGCTGGTaGGGGGTCCACTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PRPGGRSYALPGTPAYTAPFMSW*GVHFRV
Trigger: GACTCTGAAGTGGACCCCCAACCAGCTCATGAATGG...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCCGTGCCACCGCTCTTTaGCTGGTGGCAGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLRATAL*LVAVDA
Trigger: TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACG...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCCGTGCCACCGCTCTTTaGCTGGTGGCAGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: PPLFCWWQWMHTTWLKGTRATAL*LVAVDA
Trigger: TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACG...GGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp GGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGATGAGCATCTGCACCTaGTGGACGAGGTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: GPGQSAGSPGHRDAQHVLMSICT*WTRSRA
Trigger: TGCCCGGGACCTCGTCCACAAGGTGCAGATGCTCAT...CAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CAA 90 bp CCCGGGCAGGGCCTCCATGTTCCAGGGCAAGGCCTAGCCTGCATGTGTTGGGGTAGGCTCACAACCGCTTaGTTAGGAACAGAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PGQGLHVPGQGLACMCWGRLTTA*LGTEVG
Trigger: CCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCT...ACCCCAACACATGCAGGCTAGGCCTTGCCCTGGAACATGGAGGCCCTGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS TCA 90 bp CTGGATGCCCGAGGCCACGGAGTAATTGCGAGAGGAGGGCAGTCCTaGGTCTGGAGAGTCGAACTCCACGGAATGCTGCTGCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: LDARGHGVIARGGQS*VWRVELHGMLLLHH
Trigger: GTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS TCA 90 bp TCAGCAGGGTCTGTGTGCACATCGGGAAGGGGAGCTCACGGGCACTaGGCCCATGATGTGCCGGCACAACTCCGGACCTTCACTTGGGTT +
Preference number: 5 (lower is better)
Translates to: SAGSVCTSGRGAHGH*AHDVPAQLRTFTWV
Trigger: AACCCAAGTGAAGGTCCGGAGTTGTGCCGGCACATCATGGGCTCAGTGCCCGTGAGCTCCCCTTCCCGATGTGCACACAGACCCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS GCA 90 bp GCCCCTCATCTAGGCTTGACTGGATGCCCGAGGCCACGGAGTAATTaGGAGAGGAGGGCAGTCCTGAGTCTGGAGAGTCGAACTCCACGG +
Preference number: 5 (lower is better)
Translates to: APHLGLTGCPRPRSN*ERRAVLSLESRTPR
Trigger: CCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 90 bp CCTCTTCGAAGCCCACGCTCTGCCCCTCATCTAGGCTTGACTGGATaGCCGAGGCCACGGAGTAATTGCGAGAGGAGGGCAGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: PLRSPRSAPHLGLTG*PRPRSNCERRAVLS
Trigger: ACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 90 bp TGCCTCACCACCACCTCGCAGGCCTTCCACTCTGCCAACACCTGCTaGTACCTTGCTGCCACCACTGCGTCCACCTGTACTCAGACCACA +
Preference number: 5 (lower is better)
Translates to: CLTTTSQAFHSANTC*YLAATTASTCTQTT
Trigger: TGTGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 90 bp ACAGGCAACATCGCGGGGAGGAAGGATCTCGCCAGTCGACACCAATaGGGCTGCTCTACGGGCTCCCCTATTCTCAGGCCCACAGATCTC +
Preference number: 5 (lower is better)
Translates to: TGNIAGRKDLASRHQ*GCSTGSPILRPTDL
Trigger: GAGATCTGTGGGCCTGAGAATAGGGGAGCCCGTAGAGCAGCCCCATTGGTGTCGACTGGCGAGATCCTTCCTCCCCGCGATGTTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS-3UTR CAA 90 bp GTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCAACAGGGCTGCCATCTaGTCACTGCGCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: VPPLFCWWQWMHTTWLKGNRAAI*SLRRKP
Trigger: TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTT...GCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAACAGGGCTGCCATCTaGTCACTGCGCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGNRAAI*SLRRKP
Trigger: TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTT...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CTTGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACAGCACGTCTTCCCCACCTaGGTGAACAGGGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: LVANLPRHWARLPHLGEQHVFPT*VNRAAI
Trigger: GATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTG...CTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CAA 90 bp GCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGGGCACCACGAGCACGTCTTCCCCACCTaGGTGAACAGGGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: ALLLVAVDAHDLAEGHHEHVFPT*VNRAAI
Trigger: GATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTG...CTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp CACTCTGCTCCTCACAAAACCACGGAGTCACTAAGGCAGGCACACAATGGCCACCCGACGCGCTGCCGCTaGAGTGCCGTTTCCGGATCC +
Preference number: 5 (lower is better)
Translates to: HSAPHKTTESLRQAHNGHPTRCR*SAVSGS
Trigger: GGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGG...GTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTTTTGTGAGGAGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp CCTAGGCCTGGGGGCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCTTCGTTTCCGTAGCTaGGGGAACACTTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: PRPGGRSYALPGTPAYTALRFRS*GNTFPF
Trigger: GAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAAG...AGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGCCCCCAGGCCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGATGAGCATCTGCACCTaGTGGACGAGGTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLMSICT*WTRSRA
Trigger: TGCCCGGGACCTCGTCCACAAGGTGCAGATGCTCAT...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCTTTCAGGGAAGTACCTaGTGGACGAGGTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGFQGST*WTRSRA
Trigger: TGCCCGGGACCTCGTCCACAAGGTACTTCCCTGAAA...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572925.1
CDS-3UTR CAA 90 bp CCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGGGGTGCTCTGCTAGATTCTaGACATCCCGGCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGQSAGSPGHRDAQHVLGCSARF*TSRPLG
Trigger: CCCCAAAGGCCGGGATGTCAAGAATCTAGCAGAGCA...CCCCAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS TCA 90 bp CCCTCCCGTGCTCCGAACAAGCCTGCCATAGTCAGTTCTGTACAGTaGCAGGCAACATCGCGGGGAGGAAGGATCTCGCCAGTCGACACC +
Preference number: 5 (lower is better)
Translates to: PSRAPNKPAIVSSVQ*QATSRGGRISPVDT
Trigger: GGTGTCGACTGGCGAGATCCTTCCTCCCCGCGATGTTGCCTGTCACTGTACAGAACTGACTATGGCAGGCTTGTTCGGAGCACGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS TCA 90 bp TGGGTGCCCTGGCTTGCCCTTGGCGAGGTGGTCCTGGAAGTGAAGTaGCCAGGACTGGGAAATGGCAAAGATCGAAGAGGGGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: WVPWLALGEVVLEVK*PGLGNGKDRRGEAE
Trigger: CTCTGCCTCCCCTCTTCGATCTTTGCCATTTCCCAGTCCTGGTCACTTCACTTCCAGGACCACCTCGCCAAGGGCAAGCCAGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS TCA 90 bp GTCTGTGTGCACATCGGGAAGGGGAGCTCACGGGCACTGAGCCCATaGTGTGCCGGCACAACTCCGGACCTTCACTTGGGTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: VCVHIGKGSSRALSP*CAGTTPDLHLGSLS
Trigger: TGAGAGAGAACCCAAGTGAAGGTCCGGAGTTGTGCCGGCACATCATGGGCTCAGTGCCCGTGAGCTCCCCTTCCCGATGTGCACACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp AGTCGCTTGGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCCCTTaGCGAGGTGGTCCTGGAAGTGAAGTGACCAGGACTGGGAAATGG +
Preference number: 5 (lower is better)
Translates to: SRLVEFQPLGALACP*RGGPGSEVTRTGKW
Trigger: CCATTTCCCAGTCCTGGTCACTTCACTTCCAGGACCACCTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp AAAGGGTTTTCCCAGAGCTGTCCTCAAGGAGCTGGAGTCGCTTGGTaGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCCCTTGGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: KGFSQSCPQGAGVAW*SFSLWVPWLALGEV
Trigger: CACCTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGAAAACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 90 bp AGGAAAGGGTTTTCCCAGAGCTGTCCTCAAGGAGCTGGAGTCGCTTaGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCCCTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: RKGFSQSCPQGAGVA*WSFSLWVPWLALGE
Trigger: CTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGAAAACCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS-3UTR CAA 90 bp CCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAAACAGGGCTGCCATCTaGTCACTGCGCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PRIHSSSKGVSGFLGLLANRAAI*SLRRKP
Trigger: TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTT...TGCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CCTCTGCCACCCCAGCTGAGTAGGGCCCAGGCCGCTATAGCCCCTGTTAATCCTTTTCCTGCCCTCTGCTaGTTGCTGCAGCTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: PLPPQLSRAQAAIAPVNPFPALC*LLQLLY
Trigger: GTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAA...AGGATTAACAGGGGCTATAGCGGCCTGGGCCCTACTCAGCTGGGGTGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGTTTCCTGCCCTCTGCTaGTTGCTGCAGCTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGFPALC*LLQLLY
Trigger: GTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAA...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGAAGGGCCAGACGTCCTaGCGGATCTCGTGCTCTATG +
Preference number: 5 (lower is better)
Translates to: HPRIHSSSKGVSGFLGLLKGQTS*RISCSM
Trigger: CATAGAGCACGAGATCCGCAAGGACGTCTGGCCCTT...CAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTACACCTGCTGGTACCTaGCTGCCACCACTGCGTCCA +
Preference number: 5 (lower is better)
Translates to: SLRGGCDRILPRQSHPGITPAGT*LPPLRP
Trigger: TGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGT...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACGCCCCTCATCTAGGCTaGACTGGATGCCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNAPHLG*TGCPRP
Trigger: TGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGC...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCAGGCTCACAACCGCTTaGTTAGGAACAGAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLRLTTA*LGTEVG
Trigger: CCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCT...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS TCA 90 bp CTCCAGGCAGCCGCTCCCTGCTATTCTTGGCGTCCAAATAAAGAGTaGGGTTGGCCTCCTGGAGCAAGCGGGGTTTCTCCATCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LQAAAPCYSWRPNKE*GWPPGASGVSPSLC
Trigger: GCAGAGGGATGGAGAAACCCCGCTTGCTCCAGGAGGCCAACCTCACTCTTTATTTGGACGCCAAGAATAGCAGGGAGCGGCTGCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 90 bp TGTGCACATCGGGAAGGGGAGCTCACGGGCACTGAGCCCATGATGTaGCGGCACAACTCCGGACCTTCACTTGGGTTCTCTCTCATTCTG +
Preference number: 5 (lower is better)
Translates to: CAHREGELTGTEPMM*RHNSGPSLGFSLIL
Trigger: CAGAATGAGAGAGAACCCAAGTGAAGGTCCGGAGTTGTGCCGGCACATCATGGGCTCAGTGCCCGTGAGCTCCCCTTCCCGATGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS-3UTR CAA 90 bp GCAGGAGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTAGCCTCCTCCATGATTaGCTTCACCTCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: AGAMPFLAPPHTQLLQGGSLLHD*LHLLLH
Trigger: GTGAAGAAGGAGGTGAAGCAAATCATGGAGGAGGCT...ACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CGTCTTCCCCACCTTGGTGAACAGGGCTGCCATCTTGTCACTGCGCAGGAAGCCTTTCCTGCCCTCTGCTaGTTGCTGCAGCTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: RLPHLGEQGCHLVTAQEAFPALC*LLQLLY
Trigger: GTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAA...GGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CAA 90 bp CCAGCACAAGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTTTTCCTGCCCTCTGCTaGTTGCTGCAGCTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: PAQACHRSFAGGSGCTRPFPALC*LLQLLY
Trigger: GTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAA...AGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp AATCCTGTGGGGCCCCAGGTTCACTCGTGGGCAGCAGTCCAGGCTGCGGCTGCAAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: NPVGPQVHSWAAVQAAAARYCTT*SRTFSM
Trigger: CATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCT...TGCAGCCGCAGCCTGGACTGCTGCCCACGAGTGAACCTGGGGCCCCACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCGTTTTCCGCCAGGTATaGCACGACCTTGTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGVFRQV*HDLVQN
Trigger: GTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAAC...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp AGTCGGATCCAGGCTCACAACCGCTTTGTTAGGAACAGAGGTGGGGTCGGTTGGCGTGCCACCGCTCTTTaGCTGGTGGCAGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: SRIQAHNRFVRNRGGVGWRATAL*LVAVDA
Trigger: TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACG...CCAACCGACCCCACCTCTGTTCCTAACAAAGCGGTTGTGAGCCTGGATCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp TCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTTCGTTTCCGTAGCTaGGGGAACACTTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SWHPRIHSSSKGVSGFLGLRFRS*GNTFPF
Trigger: GAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAAG...GCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATTGCTCCACACGTCCTaGGTGAGGCCCGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKALLHTS*VRPAEA
Trigger: GGCCTCCGCGGGCCTCACCAAGGACGTGTGGAGCAA...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGCCTGAGGAGAACTaGGTGCGTGTGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPLPEEN*VRVAGW
Trigger: CCACCCAGCCACACGCACCAAGTTCTCCTCAGGCAG...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp AGCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGAAAGTCTGCCAGACTTaGGTGGCTGCTGGACTAGGC +
Preference number: 5 (lower is better)
Translates to: SYALPGTPAYTAPPRGFLKVCQT*VAAGLG
Trigger: GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTT...CAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp AGATACACAGAGGTACACTGTACAAGGCCGGGGAGGCCTGGGGGTCACCTCAGGGGGCTGCGGGGCCCTTaGTCATGTTTCTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: RYTEVHCTRPGRPGGHLRGLRGP*SCFSNA
Trigger: TGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCC...CCTGAGGTGACCCCCAGGCCTCCCCGGCCTTGTACAGTGTACCTCTGTGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp AACCACGGAGTCACTAAGGCAGGCACACAATGGCCACACGTGCTTGGTGGAGGCAATGGCCACACGTGCTaGGTGGAGGCCAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: NHGVTKAGTQWPHVLGGGNGHTC*VEAKDS
Trigger: TGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATT...GCCTCCACCAAGCACGTGTGGCCATTGTGTGCCTGCCTTAGTGACTCCGTGGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS GCA 90 bp TTGGGAGCTGTGAGGTTCCGCGAGCAGATCATTGAGAGCATCGCGTaGAGTTTATCCTCCTCTTCCTCATCATCGTCCACCGAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: LGAVRFREQIIESIA*SLSSSSSSSSTEAA
Trigger: CGCGGCCTCGGTGGACGATGATGAGGAAGAGGAGGATAAACTGCACGCGATGCTCTCAATGATCTGCTCGCGGAACCTCACAGCTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000575367.1
CDS GCA 90 bp GGAGTGATGCCAGAAAGAGCTACCCTCCCGTGCTCCGAACAAGCCTaGCATAGTCAGTTCTGTACAGTGACAGGCAACATCGCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GVMPERATLPCSEQA*HSQFCTVTGNIAGR
Trigger: CCTCCCCGCGATGTTGCCTGTCACTGTACAGAACTGACTATGGCAGGCTTGTTCGGAGCACGGGAGGGTAGCTCTTTCTGGCATCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 90 bp TGGGATGAGATCTCGTTCTGCTCTCCTTCCTTAAGGGGCAGGAAATaGCGCCCGGAGAGAGGCAAAGCTTTGTCCAGGGTCACAGGGCGA +
Preference number: 5 (lower is better)
Translates to: WDEISFCSPSLRGRK*RPERGKALSRVTGR
Trigger: TCGCCCTGTGACCCTGGACAAAGCTTTGCCTCTCTCCGGGCGCCATTTCCTGCCCCTTAAGGAAGGAGAGCAGAACGAGATCTCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS CCA 90 bp TCCCAGGAAAAGGAAAGGGTTTTCCCAGAGCTGTCCTCAAGGAGCTaGAGTCGCTTGGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: SQEKERVFPELSSRS*SRLVEFQPLGALAC
Trigger: GCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGAAAACCCTTTCCTTTTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS-3UTR CAA 90 bp TACCTTGTGGCAAATCTCCCCCGCCACTGGGCACGTCTTCCCCACCTTGGTGAACACAGCAGTTTCTCTTaGACTGCGTCCTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: YLVANLPRHWARLPHLGEHSSFS*TASSAL
Trigger: CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTG...TTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572875.1
CDS-3UTR CAA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACCACGTCTTCCCCACCTaGGTGAACAGGGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: ASWHPEKHVEGRASLASHHVFPT*VNRAAI
Trigger: GATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTG...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGCGTGCCACCGCTCTTTaGCTGGTGGCAGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTERATAL*LVAVDA
Trigger: TGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACG...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCAAGGGCCAGACGTCCTaGCGGATCTCGTGCTCTATG +
Preference number: 5 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLKGQTS*RISCSM
Trigger: CATAGAGCACGAGATCCGCAAGGACGTCTGGCCCTT...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCTATGCCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGAGATAAACACATCGTaGCTGATGGTGGAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: AMPFLAPPHTQLLQGGFWEINTS*LMVESR
Trigger: CCGAGACTCCACCATCAGCAACGATGTGTTTATCTC...CCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGGCATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCAGCCCCGGGCAGGGCCTCCATGCTCAGCACGTTCATaGAAAAACTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: LPDFGGCWTRPQPRAGPPCSARS*KNLMMS
Trigger: TGACATCATCAAGTTTTTCAATGAACGTGCTGAGCA...TGGAGGCCCTGCCCGGGGCTGGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp GCCTCTTGGCATCCTGAGAAGCATGTGGAAGGCAGAGCTAGCCTTGCTTCTCACATCATGTCACCAGCGTaGTGCTCGTGCCTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: ASWHPEKHVEGRASLASHIMSPA*CSCLWP
Trigger: CGGCCACAGGCACGAGCACAACGCTGGTGACATGAT...GTGAGAAGCAAGGCTAGCTCTGCCTTCCACATGCTTCTCAGGATGCCAAGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426855.6
ENST00000574563.5
CDS TCA 90 bp GTGGCTGACTACCCTGCTCTGTTTCCATCTGCTCTGCTAGATTCTTaGCATCCCGGCCTTTGGGGAAGGGCCCCCAGGATTCCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: VADYPALFPSALLDS*HPGLWGRAPRIPEN
Trigger: GTTCTCAGGAATCCTGGGGGCCCTTCCCCAAAGGCCGGGATGTCAAGAATCTAGCAGAGCAGATGGAAACAGAGCAGGGTAGTCAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CAA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCCACAGCAGTTTCTCTTaGACTGCGTCCTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSHSSFS*TASSAL
Trigger: CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTG...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCTGAAGGGCACCACGAGGGCATAGTCCCAGTAAACGCTCTTTTCCAGCTCGGACACAGCAGTTTCTCTTaGACTGCGTCCTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: AEGHHEGIVPVNALFQLGHSSFS*TASSAL
Trigger: CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTG...TCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp CATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGCCTGTCTCTTTCCTGCCCTCTGCTaGTTGCTGCAGCTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: HGRCLRQIMGCPRTEACLFPALC*LLQLLY
Trigger: GTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAA...GAGACAGGCCTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGRYCTT*SRTFSM
Trigger: CATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCT...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TGCAGAACGCAAGGGTGGGGTGGCAGGAGCGAGGCTGTACAGATACACAGAGGTGTTTTCCGCCAGGTATaGCACGACCTTGTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: CRTQGWGGRSEAVQIHRGVFRQV*HDLVQN
Trigger: GTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAAC...ACCTCTGTGTATCTGTACAGCCTCGCTCCTGCCACCCCACCCTTGCGTTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp CCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGTTGCTCCACACGTCCTaGGTGAGGCCCGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PFVMFLKCRKSARLWWLLLLHTS*VRPAEA
Trigger: GGCCTCCGCGGGCCTCACCAAGGACGTGTGGAGCAA...CAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp CTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTCCTCTTCCTGCTCAGGTTTaGGTCTGGAATCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LRGGCDRILPRQSHPGIPLPAQV*VWNLQG
Trigger: ACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAG...AGGAATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGGCCCCTCATCTAGGCTaGACTGGATGCCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: AAGPFVMFLKCRKSARLWAPHLG*TGCPRP
Trigger: TGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGC...CCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS TCA 90 bp TCAGGAAGCCTCTGCAGTCAGAGGATATGGGTGGAGAGGGGAAACTaGGACCCAGAGACGGGAAGTGCTTGCCCAGAGACATTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SGSLCSQRIWVERGN*DPETGSACPETFSL
Trigger: CAAGCTGAATGTCTCTGGGCAAGCACTTCCCGTCTCTGGGTCTCAGTTTCCCCTCTCCACCCATATCCTCTGACTGCAGAGGCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS-3UTR CAA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACAGCAGTTTCTCTTaGACTGCGTCCTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: RVTLGFLRASAPVAFQIIHSSFS*TASSAL
Trigger: CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTG...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp AGCGTGCCACCGCTCTTTTGCTGGTGGCAGTGGATGCACACGACCTGGCTGAAGAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: SVPPLFCWWQWMHTTWLKRYCTT*SRTFSM
Trigger: CATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCT...CTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp CAATGGCCACACGTGCTTGGTGGAGGCCAAGGACTCACGGACAACAAGGATGGACTTCGTTTCCGTAGCTaGGGGAACACTTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: QWPHVLGGGQGLTDNKDGLRFRS*GNTFPF
Trigger: GAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAAG...TCCATCCTTGTTGTCCGTGAGTCCTTGGCCTCCACCAAGCACGTGTGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp TCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGATTGAGATAAACACATCGTaGCTGATGGTGGAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SLRGGCDRILPRQSHPGIEINTS*LMVESR
Trigger: CCGAGACTCCACCATCAGCAACGATGTGTTTATCTC...AATCCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTTGGCTCAGTGAAGTCCATGTaGTTGTCACGGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: PPHTQLLQGGFWVPRPLGSVKSM*LSRMIS
Trigger: AGAGATCATCCGTGACAACAACATGGACTTCACTGA...GCCAAGAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTAGGCCTCTCAGTGAAGTCCATGTaGTTGTCACGGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: WHPRIHSSSKGVSGFLGLSVKSM*LSRMIS
Trigger: AGAGATCATCCGTGACAACAACATGGACTTCACTGA...GAGGCCTAGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCACGTTCTGTCAGTGAAGTCCATGTaGTTGTCACGGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: GPGQSAGSPGHRDAQHVLSVKSM*LSRMIS
Trigger: AGAGATCATCCGTGACAACAACATGGACTTCACTGA...CAGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS-3UTR CAA 90 bp CCCTTCCTGGCACCCCCGCATACACAGCTCCTCCAAGGGGGTTTCTGGGTTCCTTCAGTGAAGTCCATGTaGTTGTCACGGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: PFLAPPHTQLLQGGFWVPSVKSM*LSRMIS
Trigger: AGAGATCATCCGTGACAACAACATGGACTTCACTGA...AGGAACCCAGAAACCCCCTTGGAGGAGCTGTGTATGCGGGGGTGCCAGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCAATGAGCATCTGCACCTaGTGGACGAGGTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKAMSICT*WTRSRA
Trigger: TGCCCGGGACCTCGTCCACAAGGTGCAGATGCTCAT...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp GTGGACGAGGTCCCGGGCAATCCGCAGGATCTCCTGGGCATCGTGATGCTCAGCGACCAGCTCGTACCATaGAAAAACTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: VDEVPGNPQDLLGIVMLSDQLVP*KNLMMS
Trigger: TGACATCATCAAGTTTTTCAATGGTACGAGCTGGTC...GCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS GCA 90 bp GCTGTTCAAAAGGCAGGAGTGATGCCAGAAAGAGCTACCCTCCCGTaGTCCGAACAAGCCTGCCATAGTCAGTTCTGTACAGTGACAGGC +
Preference number: 5 (lower is better)
Translates to: AVQKAGVMPERATLP*SEQACHSQFCTVTG
Trigger: GCCTGTCACTGTACAGAACTGACTATGGCAGGCTTGTTCGGAGCACGGGAGGGTAGCTCTTTCTGGCATCACTCCTGCCTTTTGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS-3UTR CAA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCACGTCTTCCCCACCTaGGTGAACAGGGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGHVFPT*VNRAAI
Trigger: GATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTG...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGGTTTTCCGCCAGGTATaGCACGACCTTGTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEVFRQV*HDLVQN
Trigger: GTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAAC...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGGTTCCATTCATGAGCTGGTaGGGGGTCCACTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VNALFQLGVPQSPIHELVPFMSW*GVHFRV
Trigger: GACTCTGAAGTGGACCCCCAACCAGCTCATGAATGG...AACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp AGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCGCGTCTTTCATCGGATaGGGAGCTGTGAGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: RASAPVAFQIIHWQKHHFASFIG*GAVRFR
Trigger: GCGGAACCTCACAGCTCCCAATCCGATGAAAGACGC...GAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268989.8
CDS-3UTR CAA 90 bp GAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCGAGATAAACACATCGTaGCTGATGGTGGAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: ESPWDSSEQVLRSHSRSSEINTS*LMVESR
Trigger: CCGAGACTCCACCATCAGCAACGATGTGTTTATCTC...GGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp GCAGTCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACCTTCCTGCTCAGGTTTaGGTCTGGAATCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: AVSGTWQMSATDNGLPSNLPAQV*VWNLQG
Trigger: ACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAG...GTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp TCTCAGGGACATGGCAGATGTCTGCGACAGATAATGGGCTGCCCTCGAACTGAGAAACCAGAAGCAGTTTaGGTTGCTCCAGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SQGHGRCLRQIMGCPRTEKPEAV*VAPAGA
Trigger: AGCCCCAGCTGGAGCAACCAAAACTGCTTCTGGTTT...CTCAGTTCGAGGGCAGCCCATTATCTGTCGCAGACATCTGCCATGTCCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp GTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCCCCGGGCTGCGGGGCCCTTaGTCATGTTTCTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: VSQMQKVCQTLVAAGLGPGLRGP*SCFSNA
Trigger: TGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCC...GGGGCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp CCAGTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGAGCCTCCTCCATGATTaGCTTCACCTCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PVNALFQLGVPQSPIHELSLLHD*LHLLLH
Trigger: GTGAAGAAGGAGGTGAAGCAAATCATGGAGGAGGCT...CAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCAACAGGGCTGCCATCTaGTCACTGCGCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGNRAAI*SLRRKP
Trigger: TGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTT...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp GTAAACGCTCTTTTCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGGTTGTTTTCCGCCAGGTATaGCACGACCTTGTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: VNALFQLGVPQSPIHELVVFRQV*HDLVQN
Trigger: GTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAAC...AACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS-3UTR CAA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCACCATTCATGAGCTGGTaGGGGGTCCACTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKAPFMSW*GVHFRV
Trigger: GACTCTGAAGTGGACCCCCAACCAGCTCATGAATGG...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CTGTCTCTGAGGGGAGGCTGTGACCGGATTCTTCCCCGACAGAGTCACCCTGGGTGCTCAGCACGTTCATaGAAAAACTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: LSLRGGCDRILPRQSHPGCSARS*KNLMMS
Trigger: TGACATCATCAAGTTTTTCAATGAACGTGCTGAGCA...CCCAGGGTGACTCTGTCGGGGAAGAATCCGGTCACAGCCTCCCCTCAGAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp CGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCAAAGTCTGCCAGACTTaGGTGGCTGCTGGACTAGGC +
Preference number: 5 (lower is better)
Translates to: RGPLSCFSNAESLPDFGGKVCQT*VAAGLG
Trigger: GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTT...GCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp AGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCATCACTTCAAAGTCTGCCAGACTTaGGTGGCTGCTGGACTAGGC +
Preference number: 5 (lower is better)
Translates to: RASAPVAFQIIHWQKHHFKVCQT*VAAGLG
Trigger: GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTT...GAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS TCA 90 bp GTCTTTCATCGGATTGGGAGCTGTGAGGTTCCGCGAGCAGATCATTaGGAGCATCGCGTGCAGTTTATCCTCCTCTTCCTCATCATCGTC +
Preference number: 5 (lower is better)
Translates to: VFHRIGSCEVPRADH*EHRVQFILLFLIIV
Trigger: GACGATGATGAGGAAGAGGAGGATAAACTGCACGCGATGCTCTCAATGATCTGCTCGCGGAACCTCACAGCTCCCAATCCGATGAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000575367.1
CDS TCA 90 bp GGCCCCCAACCACCCAGGGATCTTGGTCAACGAACTTCACCTACATaGATCTTCGTTTCCTCATGTGAAAAATGGAGAGAGGCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: GPQPPRDLGQRTSPT*IFVSSCEKWREAAE
Trigger: CTCCGCTGCCTCTCTCCATTTTTCACATGAGGAAACGAAGATTCATGTAGGTGAAGTTCGTTGACCAAGATCCCTGGGTGGTTGGGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS GCA 90 bp CACCACGAGGGCATAGTCCCAGTAAACGCTAGAAAGGAACCAGACTaGTGTCACTGTGTCCAAAGACCTGCCATCCTTCCTTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: HHEGIVPVNARKEPD*CHCVQRPAILPSFL
Trigger: AAGGAAGGAAGGAAGGATGGCAGGTCTTTGGACACAGTGACAGCAGTCTGGTTCCTTTCTAGCGTTTACTGGGACTATGCCCTCGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS-3UTR CAA 90 bp AGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCAAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: SHPGIPQSKCSGRIPDHPRYCTT*SRTFSM
Trigger: CATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCT...TGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS-3UTR CAA 90 bp CATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTGGCTGCTGGACTAGGCGGGCTGCGGGGCCCTTaGTCATGTTTCTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: HVSQMQKVCQTLVAAGLGGLRGP*SCFSNA
Trigger: TGCATTTGAGAAACATGACAAAGGGCCCCGCAGCCC...GCCTAGTCCAGCAGCCACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp ATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTGGCAAAAGCAAGCCTCCTCCATGATTaGCTTCACCTCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: IPQSKCSGRIPDHPLAKASLLHD*LHLLLH
Trigger: GTGAAGAAGGAGGTGAAGCAAATCATGGAGGAGGCT...TGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 90 bp GGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCCACTaGCAAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: GFLRASAPVAFQIIH*QKHHFLHVVFREVP
Trigger: TGGTACTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTTGCCAGTGGATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574563.5
CDS-3UTR CAA 90 bp CTGCGGGGCCCTTTGTCATGTTTCTCAAATGCAGAAAGTCTGCCAGACTTTGGTCTTCCTGCTCAGGTTTaGGTCTGGAATCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LRGPLSCFSNAESLPDFGLPAQV*VWNLQG
Trigger: ACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAG...ACCAAAGTCTGGCAGACTTTCTGCATTTGAGAAACATGACAAAGGGCCCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACAGCCCCTCATCTAGGCTaGACTGGATGCCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTAPHLG*TGCPRP
Trigger: TGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGC...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS GCA 90 bp AAACTTATCAGTGTTGGTTGGGCCAGGCAGTCACAGTTTAGAACTTaGTGTTCAAAAGGCAGGAGTGATGCCAGAAAGAGCTACCCTCCC +
Preference number: 5 (lower is better)
Translates to: KLISVGWARQSQFRT*CSKGRSDARKSYPP
Trigger: GGGAGGGTAGCTCTTTCTGGCATCACTCCTGCCTTTTGAACAGCAAGTTCTAAACTGTGACTGCCTGGCCCAACCAACACTGATAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS-3UTR CAA 90 bp AGAGTCACCCTGGGATTCCTCAGAGCAAGTGCTCCGGTCGCATTCCAGATCATCTGCTCAGCACGTTCATaGAAAAACTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: RVTLGFLRASAPVAFQIICSARS*KNLMMS
Trigger: TGACATCATCAAGTTTTTCAATGAACGTGCTGAGCA...GATGATCTGGAATGCGACCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000572925.1
CDS-3UTR CAA 90 bp AAAAGCATCACTTCTTACACGTGGTTTTCAGGGAAGTACCTAATGCAGAACGCACCATTCATGAGCTGGTaGGGGGTCCACTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: KSITSYTWFSGKYLMQNAPFMSW*GVHFRV
Trigger: GACTCTGAAGTGGACCCCCAACCAGCTCATGAATGG...TGCGTTCTGCATTAGGTACTTCCCTGAAAACCACGTGTAAGAAGTGATGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000426855.6
CDS-3UTR CAA 90 bp ACACAGAAGAGTATAGTTTCTGAGGCAAAAATCATACACACTCTGCTCCTCACATCCGCGAGCAGATCATaGAGAGCATCGCGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: TQKSIVSEAKIIHTLLLTSASRS*RASRAV
Trigger: AACTGCACGCGATGCTCTCAATGATCTGCTCGCGGA...TGTGAGGAGCAGAGTGTGTATGATTTTTGCCTCAGAAACTATACTCTTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268989.8
CDS GCA 72 bp GCCCCCGGGGGCCGGTCAGGTGGGATAACGCTATGGTaGACCAGCGCCGACAGGTGGGTCCGCACCGTGGAC +
Preference number: 6 (lower is better)
Translates to: APGGRSGGITLW*TSADRWVRTVD
Trigger: GTCCACGGTGCGGACCCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACCTGACCGGCCCCCGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS CCA 72 bp GAGGCCCCCGGGGGCCGGTCAGGTGGGATAACGCTATaGTGCACCAGCGCCGACAGGTGGGTCCGCACCGTG +
Preference number: 6 (lower is better)
Translates to: EAPGGRSGGITL*CTSADRWVRTV
Trigger: CACGGTGCGGACCCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACCTGACCGGCCCCCGGGGGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS CCA 72 bp TGCCCTGTCCCTGCCTGCCACCTGGACAGAGTGCTGTaGGGCCCCCGCCTGGCCCCCAACCACCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: CPVPACHLDRVL*GPRLAPNHPGI
Trigger: GATCCCTGGGTGGTTGGGGGCCAGGCGGGGGCCCCACAGCACTCTGTCCAGGTGGCAGGCAGGGACAGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS CCA 72 bp TATGGTGCACCAGCGCCGACAGGTGGGTCCGCACCGTaGACAGGTGGCGGCAGTGTGCCAGCCCTGCGGTGG +
Preference number: 6 (lower is better)
Translates to: YGAPAPTGGSAP*TGGGSVPALRW
Trigger: CCACCGCAGGGCTGGCACACTGCCGCCACCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGTGCACCATA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 72 bp CACAGGCAGCCAGCCTGTCCTCCGACGCGCTGCCGCTaGAGTGCCGTTTCCGGATCCCCAGGGCTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: HRQPACPPTRCR*SAVSGSPGLGA
Trigger: AGCGCCCAGCCCTGGGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACAGGCTGGCTGCCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS TCA 72 bp ACAGGCAGCCAGCCTGTCCTCCGACGCGCTGCCGCTTaGGTGCCGTTTCCGGATCCCCAGGGCTGGGCGCTT +
Preference number: 6 (lower is better)
Translates to: TGSQPVLRRAAA*VPFPDPQGWAL
Trigger: AAGCGCCCAGCCCTGGGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACAGGCTGGCTGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS CCA 72 bp GGCTGGGCGCTTTGCAGGGGAGTCCTGGCGAGTAGGTaGACCCCGGATGCGGTGCCGCTGGACCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: GWALCRGVLASR*TPDAVPLDQLI
Trigger: GATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS CCA 72 bp CGGACACACACGTGGCTGGACACGCTAACGGGAAGCTaGGGCCGAGCGCTGCCCACTCACCGGTCGGGGATG +
Preference number: 6 (lower is better)
Translates to: RTHTWLDTLTGS*GRALPTHRSGM
Trigger: CATCCCCGACCGGTGAGTGGGCAGCGCTCGGCCCCAGCTTCCCGTTAGCGTGTCCAGCCACGTGTGTGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS TCA 72 bp CCACCGCTCTCTGGGGGTGAACGTGGAGAGTGCGGCTaGGGCCCTCTCGTCGGCTATCACACCCTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PPLSGGERGECG*GPLVGYHTLLA
Trigger: GGCCAGCAGGGTGTGATAGCCGACGAGAGGGCCTCAGCCGCACTCTCCACGTTCACCCCCAGAGAGCGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CCA 72 bp TATGGTGCACCAGCGCCGACAGGTGGGTCCGCACCGTaGACAGGTGGCGGCAGTGTGCCAGCCAGCCGTAGA +
Preference number: 6 (lower is better)
Translates to: YGAPAPTGGSAP*TGGGSVPASRR
Trigger: TCTACGGCTGGCTGGCACACTGCCGCCACCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGTGCACCATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 72 bp CCCCAGGCCCAGCTGCAAGAGATTCTGCCGGGACCCTaGTCACTCCGTGGCATCGGCCCTGGCCTGTCAACC +
Preference number: 6 (lower is better)
Translates to: PQAQLQEILPGP*SLRGIGPGLST
Trigger: GGTTGACAGGCCAGGGCCGATGCCACGGAGTGACCAGGGTCCCGGCAGAATCTCTTGCAGCTGGGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 90 bp GCCCCCGAGACCCCCAACCCTCCAGGTCCCGTCTGGCTCACATCGTaGCTGATGGTGGAGTCTCGGTGGATGAGGCGCTGCACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: APETPNPPGPVWLTS*LMVESRWMRRCTWL
Trigger: CAGCCACGTGCAGCGCCTCATCCACCGAGACTCCACCATCAGCAACGATGTGAGCCAGACGGGACCTGGAGGGTTGGGGGTCTCGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS TCA 72 bp ATGAGCGCCGTGCGTACCCATACGTGTTTCAAGGCCTaGGGGCTGAGGGCCGGGGCCTTCCCGCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: MSAVRTHTCFKA*GLRAGAFPLAE
Trigger: CTCAGCCAGCGGGAAGGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGTATGGGTACGCACGGCGCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
ENST00000574650.1
CDS TCA 72 bp TTCTCCTGGCTGGGATCCTGGGGCTCCCTCAAAGTGTaGGCTGCAGGGCCGGGCCCACTGGAGCCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: FSWLGSWGSLKV*AAGPGPLEPSS
Trigger: GGAGGAAGGCTCCAGTGGGCCCGGCCCTGCAGCTCACACTTTGAGGGAGCCCCAGGATCCCAGCCAGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS TCA 72 bp CACCAGCGTTGTGCTCGTGCCTGTGGCCGGGGTAGATaGTCCGGAACACATAGTCGGTGGCCCGCCCCGTGC +
Preference number: 6 (lower is better)
Translates to: HQRCARACGRGR*SGTHSRWPAPC
Trigger: GCACGGGGCGGGCCACCGACTATGTGTTCCGGATCATCTACCCCGGCCACAGGCACGAGCACAACGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426855.6
ENST00000574563.5
ENST00000574857.1
CDS GCA 72 bp CGAACTCCACGGAATGCTGCTGCTCCACCACGGCGGTaGCCGGAGTCCCGGGTCCTGCTTCCTGCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: RTPRNAAAPPRR*PESRVLLPAQV
Trigger: AACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp CCTGAGTCTGGAGAGTCGAACTCCACGGAATGCTGCTaGTCCACCACGGCGGTGCCCGGAGTCCCGGGTCCT +
Preference number: 6 (lower is better)
Translates to: PESGESNSTECC*STTAVPGVPGP
Trigger: AGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp GGCAGTCCTGAGTCTGGAGAGTCGAACTCCACGGAATaGTGCTGCTCCACCACGGCGGTGCCCGGAGTCCCG +
Preference number: 6 (lower is better)
Translates to: GSPESGESNSTE*CCSTTAVPGVP
Trigger: CGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp TCCCCACCGCCGTCCTCCTCTTCGAAGCCCACGCTCTaGCCCTCATCTAGGCTTGACTGGATGCCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: SPPPSSSSKPTL*PSSRLDWMPEA
Trigger: GGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGAAGAGGAGGACGGCGGTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 72 bp GCCCGGAGTCCCGGGTCCTGCTTCCTGCTCAGGTTTTaGTCTGGAATCTTCAGGGTCCTGGGGCTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: ARSPGSCFLLRF*SGIFRVLGLRG
Trigger: CCCCCGGAGCCCCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 72 bp GCTGCAAGAGATTCTGCCGGGACCCTGGTCACTCCGTaGCATCGGCCCTGGCCTGTCAACCGCACCCACTGG +
Preference number: 6 (lower is better)
Translates to: AARDSAGTLVTP*HRPWPVNRTHW
Trigger: CCAGTGGGTGCGGTTGACAGGCCAGGGCCGATGCCACGGAGTGACCAGGGTCCCGGCAGAATCTCTTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp GTGACTGCTGAAGCCCAGGCAAGGCCTGCTTTGGGGTaGCCACGTCCTCCCGTGCCCCAGCTCACAGTGGGA +
Preference number: 6 (lower is better)
Translates to: VTAEAQARPALG*PRPPVPQLTVG
Trigger: TCCCACTGTGAGCTGGGGCACGGGAGGACGTGGCCACCCCAAAGCAGGCCTTGCCTGGGCTTCAGCAGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS CCA 72 bp GTGGCCCCCGAGACCCCCAACCCTCCAGGTCCCGTCTaGCTCACATCGTTGCTGATGGTGGAGTCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: VAPETPNPPGPV*LTSLLMVESRW
Trigger: CCACCGAGACTCCACCATCAGCAACGATGTGAGCCAGACGGGACCTGGAGGGTTGGGGGTCTCGGGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp GTGGCTGTGCCCCATTCTTCCCTCCCTCGGGATCCCTaGGAAGACGTCCTCCAGAGCCACCTGCCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: VAVPHSSLPRDP*EDVLQSHLPPR
Trigger: TCTGGGCGGCAGGTGGCTCTGGAGGACGTCTTCCCAGGGATCCCGAGGGAGGGAAGAATGGGGCACAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572841.1
CDS TCA 72 bp GATGAGGCGCTGCACGTGGCTGTCGATGCTGCTGCCTaGGGAGAACTTGGTGCGTGTGGCTGGGTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: DEALHVAVDAAA*GELGACGWVGL
Trigger: GAGGCCCACCCAGCCACACGCACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS TCA 72 bp ACAGCGGGAGACACCGGAAGACCGACGATGAAGGGCTaGGAGGCTCTCAGGGATGGCCGGCTGCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: TAGDTGRPTMKG*EALRDGRLHQH
Trigger: GTGCTGGTGCAGCCGGCCATCCCTGAGAGCCTCTCAGCCCTTCATCGTCGGTCTTCCGGTGTCTCCCGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570431.1
CDS GCA 72 bp CCGCTGCCTCACCACCACCTCGCAGGCCTTCCACTCTaGCAACACCTGCTGGTACCTTGCTGCCACCACTGC +
Preference number: 6 (lower is better)
Translates to: PLPHHHLAGLPL*QHLLVPCCHHC
Trigger: GCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS GCA 72 bp AGTCCTGAGTCTGGAGAGTCGAACTCCACGGAATGCTaGTGCTCCACCACGGCGGTGCCCGGAGTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: SPESGESNSTEC*CSTTAVPGVPG
Trigger: ACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp GGGCCTCAGGGTAAGGACGGTGGAGCTGCCCTGCCATaGTTCTTTCCGGCTGGGAAGGGGCTGAGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: GPQGKDGGAALP*FFPAGKGLRLP
Trigger: TGGAAGCCTCAGCCCCTTCCCAGCCGGAAAGAAGCATGGCAGGGCAGCTCCACCGTCCTTACCCTGAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp TCGCAGGGCCCCACCAGTTCCCAGAGGTCAGGCTGGTaGTCAGGACCACTGTGCATAAAACGCGGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: SQGPTSSQRSGW*SGPLCIKRGWP
Trigger: GGGCCACCCGCGTTTTATGCACAGTGGTCCTGAGCACCAGCCTGACCTCTGGGAACTGGTGGGGCCCTGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp GCCTCTGGATGCCATCCTGGCTCACCAGCACAAGCGTaGCACCGCTCTCTGGGGGTGAACGTGGAGAGTGCG +
Preference number: 6 (lower is better)
Translates to: ASGCHPGSPAQA*HRSLGVNVESA
Trigger: CGCACTCTCCACGTTCACCCCCAGAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CCA 72 bp CGGCCTCCAGTTCTCCGGCCTGAGGCTTCTCCTGGCTaGGATCCTGGGGCTCCCTCAAAGTGTGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RPPVLRPEASPG*DPGAPSKCELQ
Trigger: CTGCAGCTCACACTTTGAGGGAGCCCCAGGATCCCAGCCAGGAGAAGCCTCAGGCCGGAGAACTGGAGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 72 bp TCTGCCGGGACCCTGGTCACTCCGTGGCATCGGCCCTaGCCTGTCAACCGCACCCACTGGCACATTTTACCC +
Preference number: 6 (lower is better)
Translates to: SAGTLVTPWHRP*PVNRTHWHILP
Trigger: GGGTAAAATGTGCCAGTGGGTGCGGTTGACAGGCCAGGGCCGATGCCACGGAGTGACCAGGGTCCCGGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 72 bp GGCCCTCCCCTTCAGGAGCTGGGCCTGCACTGGACCTaGGGTCCTGAGTCTCAGACTCAAGACGGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: GPPLQELGLHWT*GPESQTQDGPQ
Trigger: CTGAGGCCCGTCTTGAGTCTGAGACTCAGGACCCAAGGTCCAGTGCAGGCCCAGCTCCTGAAGGGGAGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 90 bp CGTGCACCAGGCCCTCCCCTTCAGGAGCTGGGCCTGCACTGGACCTaGGGTCCTGAGTCTCAGACTCAAGACGGGCCTCAGGGTAAGGAC +
Preference number: 6 (lower is better)
Translates to: RAPGPPLQELGLHWT*GPESQTQDGPQGKD
Trigger: GTCCTTACCCTGAGGCCCGTCTTGAGTCTGAGACTCAGGACCCAAGGTCCAGTGCAGGCCCAGCTCCTGAAGGGGAGGGCCTGGTGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS TCA 72 bp CTCCTTCTACAGCGGGAGACACCGGAAGACCGACGATaGAGGGCTGAGAGGCTCTCAGGGATGGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: LLLQRETPEDRR*RAERLSGMAGC
Trigger: GCAGCCGGCCATCCCTGAGAGCCTCTCAGCCCTTCATCGTCGGTCTTCCGGTGTCTCCCGCTGTAGAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570431.1
CDS GCA 72 bp ACCACGGCGGTGCCCGGAGTCCCGGGTCCTGCTTCCTaGTCAGGTTTTGGTCTGGAATCTTCAGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: TTAVPGVPGPAS*SGFGLESSGSW
Trigger: CCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp AGGCAAGGCCTGCTTTGGGGTGGCCACGTCCTCCCGTaGCCCAGCTCACAGTGGGATGAGATCTCGTTCTGC +
Preference number: 6 (lower is better)
Translates to: RQGLLWGGHVLP*PSSQWDEISFC
Trigger: GCAGAACGAGATCTCATCCCACTGTGAGCTGGGGCACGGGAGGACGTGGCCACCCCAAAGCAGGCCTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS GCA 72 bp AGCGTGCACCAGGCCCTCCCCTTCAGGAGCTGGGCCTaGACTGGACCTTGGGTCCTGAGTCTCAGACTCAAG +
Preference number: 6 (lower is better)
Translates to: SVHQALPFRSWA*TGPWVLSLRLK
Trigger: CTTGAGTCTGAGACTCAGGACCCAAGGTCCAGTGCAGGCCCAGCTCCTGAAGGGGAGGGCCTGGTGCACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp CTCGGGATCCCTGGGAAGACGTCCTCCAGAGCCACCTaGCGCCCAGAAGTCAGCCTTTCCACGACCCTAAGG +
Preference number: 6 (lower is better)
Translates to: LGIPGKTSSRAT*RPEVSLSTTLR
Trigger: CCTTAGGGTCGTGGAAAGGCTGACTTCTGGGCGGCAGGTGGCTCTGGAGGACGTCTTCCCAGGGATCCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572841.1
CDS GCA 72 bp GAGCTGGAGTCGCTTGGTGGAGTTTCAGCCTCTGGGTaGCCTGGCTTGCCCTTGGCGAGGTGGTCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: ELESLGGVSASG*PGLPLARWSWK
Trigger: CTTCCAGGACCACCTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS GCA 72 bp GCTCCCTCAGCACCTGCCCCGTACCCACTGTGCCTGTaGTCTCAGGCTCACCTAGAAGAGAGGCCAGGATCG +
Preference number: 6 (lower is better)
Translates to: APSAPAPYPLCL*SQAHLEERPGS
Trigger: CGATCCTGGCCTCTCTTCTAGGTGAGCCTGAGAGCACAGGCACAGTGGGTACGGGGCAGGTGCTGAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS GCA 72 bp TCCCACTGTGGAGACAGAGACAGCCAGCCCAGACGATaGTCCCTCAGCACCTGCCCCGTACCCACTGTGCCT +
Preference number: 6 (lower is better)
Translates to: SHCGDRDSQPRR*SLSTCPVPTVP
Trigger: AGGCACAGTGGGTACGGGGCAGGTGCTGAGGGAGCATCGTCTGGGCTGGCTGTCTCTGTCTCCACAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS GCA 72 bp GAGGAGGACGAGGAGTCTTACAGGCCCCACGCACAGTaGACAGCTGGCAGAAGGCAGCCTCTCCCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: EEDEESYRPHAQ*TAGRRQPLPSH
Trigger: GTGGGAAGGGAGAGGCTGCCTTCTGCCAGCTGTGCACTGTGCGTGGGGCCTGTAAGACTCCTCGTCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CCA 72 bp ACCACCTCGCAGGCCTTCCACTCTGCCAACACCTGCTaGTACCTTGCTGCCACCACTGCGTCCACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TTSQAFHSANTC*YLAATTASTCS
Trigger: GGAGCAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CCA 72 bp ATCGCGGGGAGGAAGGATCTCGCCAGTCGACACCAATaGGGCTGCTCTACGGGCTCCCCTATTCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: IAGRKDLASRHQ*GCSTGSPILRP
Trigger: GGGCCTGAGAATAGGGGAGCCCGTAGAGCAGCCCCATTGGTGTCGACTGGCGAGATCCTTCCTCCCCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp GGAGGATGTGAAAGACCGGGACTGTCTGGGATGGGCTaGCAGCCCAGGAGGTCATCGGCCCTCACAGAGGCT +
Preference number: 6 (lower is better)
Translates to: GGCERPGLSGMG*QPRRSSALTEA
Trigger: AGCCTCTGTGAGGGCCGATGACCTCCTGGGCTGCCAGCCCATCCCAGACAGTCCCGGTCTTTCACATCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp AGGTGGGAGGATGTGAAAGACCGGGACTGTCTGGGATaGGCTGGCAGCCCAGGAGGTCATCGGCCCTCACAG +
Preference number: 6 (lower is better)
Translates to: RWEDVKDRDCLG*AGSPGGHRPSQ
Trigger: CTGTGAGGGCCGATGACCTCCTGGGCTGCCAGCCCATCCCAGACAGTCCCGGTCTTTCACATCCTCCCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp GGTGACACGGCCTTTAAGGACAGACGGACACACACGTaGCTGGACACGCTAACGGGAAGCTGGGGCCGAGCG +
Preference number: 6 (lower is better)
Translates to: GDTAFKDRRTHT*LDTLTGSWGRA
Trigger: CGCTCGGCCCCAGCTTCCCGTTAGCGTGTCCAGCCACGTGTGTGTCCGTCTGTCCTTAAAGGCCGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp CCCACCCGAGCCGAGGACAAGGCAGGCTTACTTTGCTaGTGGCAGTGGATGCACACGACCTGGCTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: PTRAEDKAGLLC*WQWMHTTWLKG
Trigger: GCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAGTAAGCCTGCCTTGTCCTCGGCTCGGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CAA 72 bp AGGGGCAGGAAATGGCGCCCGGAGAGAGGCAAAGCTTaGTCCAGGGTCACAGGGCGATGTGGAGGCAGGACG +
Preference number: 6 (lower is better)
Translates to: RGRKWRPERGKA*SRVTGRCGGRT
Trigger: CGTCCTGCCTCCACATCGCCCTGTGACCCTGGACAAAGCTTTGCCTCTCTCCGGGCGCCATTTCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS CAA 72 bp ACCCCCAACCCTCCAGGTCCCGTCTGGCTCACATCGTaGCTGATGGTGGAGTCTCGGTGGATGAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: TPNPPGPVWLTS*LMVESRWMRRC
Trigger: GCAGCGCCTCATCCACCGAGACTCCACCATCAGCAACGATGTGAGCCAGACGGGACCTGGAGGGTTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 90 bp CGCCGTCCTCCTCTTCGAAGCCCACGCTCTGCCCCTCATCTAGGCTaGACTGGATGCCCGAGGCCACGGAGTAATTGCGAGAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: RRPPLRSPRSAPHLG*TGCPRPRSNCERRA
Trigger: TGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGAAGAGGAGGACGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CAA 90 bp GCCCGCTCGGCACATGGACAGCTGTCCGTCTCAGCCGCTGAGAGCTaGGCTCAGACAAACCTCTTCACGGCCAGGCTTGGCTCCGTCCTA +
Preference number: 6 (lower is better)
Translates to: ARSAHGQLSVSAAES*AQTNLFTARLGSVL
Trigger: TAGGACGGAGCCAAGCCTGGCCGTGAAGAGGTTTGTCTGAGCCAAGCTCTCAGCGGCTGAGACGGACAGCTGTCCATGTGCCGAGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CAA 90 bp CCACCACCTCGCAGGCCTTCCACTCTGCCAACACCTGCTGGTACCTaGCTGCCACCACTGCGTCCACCTGTACTCAGACCACACCACGAC +
Preference number: 6 (lower is better)
Translates to: PPPRRPSTLPTPAGT*LPPLRPPVLRPHHD
Trigger: GTCGTGGTGTGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS TCA 72 bp CACATCGGGAAGGGGAGCTCACGGGCACTGAGCCCATaGTGTGCCGGCACAACTCCGGACCTTCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: HIGKGSSRALSP*CAGTTPDLHLG
Trigger: ACCCAAGTGAAGGTCCGGAGTTGTGCCGGCACATCATGGGCTCAGTGCCCGTGAGCTCCCCTTCCCGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS TCA 72 bp TCTGTGTGCACATCGGGAAGGGGAGCTCACGGGCACTaGGCCCATGATGTGCCGGCACAACTCCGGACCTTC +
Preference number: 6 (lower is better)
Translates to: SVCTSGRGAHGH*AHDVPAQLRTF
Trigger: GAAGGTCCGGAGTTGTGCCGGCACATCATGGGCTCAGTGCCCGTGAGCTCCCCTTCCCGATGTGCACACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS TCA 72 bp CCGCTCGGCACATGGACAGCTGTCCGTCTCAGCCGCTaGGAGCTTGGCTCAGACAAACCTCTTCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: PLGTWTAVRLSR*ELGSDKPLHGQ
Trigger: CTGGCCGTGAAGAGGTTTGTCTGAGCCAAGCTCTCAGCGGCTGAGACGGACAGCTGTCCATGTGCCGAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 72 bp AGCCCACGCTCTGCCCCTCATCTAGGCTTGACTGGATaGCCGAGGCCACGGAGTAATTGCGAGAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: SPRSAPHLGLTG*PRPRSNCERRA
Trigger: TGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp CGGGAAGGGGAGCTCACGGGCACTGAGCCCATGATGTaGCGGCACAACTCCGGACCTTCACTTGGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: REGELTGTEPMM*RHNSGPSLGFS
Trigger: AGAGAACCCAAGTGAAGGTCCGGAGTTGTGCCGGCACATCATGGGCTCAGTGCCCGTGAGCTCCCCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS GCA 72 bp GACGATGCTCCCTCAGCACCTGCCCCGTACCCACTGTaGCTGTGCTCTCAGGCTCACCTAGAAGAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: DDAPSAPAPYPL*LCSQAHLEERP
Trigger: TGGCCTCTCTTCTAGGTGAGCCTGAGAGCACAGGCACAGTGGGTACGGGGCAGGTGCTGAGGGAGCATCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573062.5
CDS CCA 72 bp TTCATACTCTCACACAGTAGCCTGAGCGGCAACCTGTaGCAACAACCGGGCTCAGCAGGGAGGGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: FILSHSSLSGNL*QQPGSAGRGCG
Trigger: GCCGCAGCCCCTCCCTGCTGAGCCCGGTTGTTGCCACAGGTTGCCGCTCAGGCTACTGTGTGAGAGTATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS CCA 72 bp TTCTCGCAGGGCCCCACCAGTTCCCAGAGGTCAGGCTaGTGCTCAGGACCACTGTGCATAAAACGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: FSQGPTSSQRSG*CSGPLCIKRGW
Trigger: CCACCCGCGTTTTATGCACAGTGGTCCTGAGCACCAGCCTGACCTCTGGGAACTGGTGGGGCCCTGCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp GGAGTCGCTTGGTGGAGTTTCAGCCTCTGGGTGCCCTaGCTTGCCCTTGGCGAGGTGGTCCTGGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: GVAWWSFSLWVP*LALGEVVLEVK
Trigger: CTTCACTTCCAGGACCACCTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp ACCCGAGCCGAGGACAAGGCAGGCTTACTTTGCTGGTaGCAGTGGATGCACACGACCTGGCTGAAGGGCACC +
Preference number: 6 (lower is better)
Translates to: TRAEDKAGLLCW*QWMHTTWLKGT
Trigger: GGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAGTAAGCCTGCCTTGTCCTCGGCTCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 72 bp GGCCAGGATCGGGCCGAACACAGGGTCTGCCAGCAGTaGCTCCTTCTCGTAGTACTTGCTGCAGTTTTCCGC +
Preference number: 6 (lower is better)
Translates to: GQDRAEHRVCQQ*LLLVVLAAVFR
Trigger: GCGGAAAACTGCAGCAAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGCCCGATCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS GCA 72 bp TCGTTGCTGATGGTGGAGTCTCGGTGGATGAGGCGCTaGACGTGGCTGTCGATGCTGCTGCCTGAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: SLLMVESRWMRR*TWLSMLLPEEN
Trigger: GTTCTCCTCAGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCACCATCAGCAACGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS GCA 72 bp GCAGGCCTTCCACTCTGCCAACACCTGCTGGTACCTTaGTGCCACCACTGCGTCCACCTGTACTCAGACCAC +
Preference number: 6 (lower is better)
Translates to: AGLPLCQHLLVP*CHHCVHLYSDH
Trigger: GTGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp GGGAGGAAGGATCTCGCCAGTCGACACCAATGGGGCTaGTCTACGGGCTCCCCTATTCTCAGGCCCACAGAT +
Preference number: 6 (lower is better)
Translates to: GRKDLASRHQWG*STGSPILRPTD
Trigger: ATCTGTGGGCCTGAGAATAGGGGAGCCCGTAGAGCAGCCCCATTGGTGTCGACTGGCGAGATCCTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp CTGATGGTGGAGTCTCGGTGGATGAGGCGCTGCACGTaGCTGTCGATGCTGCTGCCTGAGGAGAACTTGGTG +
Preference number: 6 (lower is better)
Translates to: LMVESRWMRRCT*LSMLLPEENLV
Trigger: CACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCACCATCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573717.2
ENST00000574563.5
ENST00000574857.1
CDS CCA 72 bp TGGGGTGGCCACGTCCTCCCGTGCCCCAGCTCACAGTaGGATGAGATCTCGTTCTGCTCTCCTTCCTTAAGG +
Preference number: 6 (lower is better)
Translates to: WGGHVLPCPSSQ*DEISFCSPSLR
Trigger: CCTTAAGGAAGGAGAGCAGAACGAGATCTCATCCCACTGTGAGCTGGGGCACGGGAGGACGTGGCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573717.2
ENST00000574250.1
ENST00000574857.1
CDS CCA 72 bp ACCACCTCGCAGGCCTTCCACTCTGCCAACACCTGCTaGTACCTTGCTGCCACCACTGCGTCCACCTGTACT +
Preference number: 6 (lower is better)
Translates to: TTSQAFHSANTC*YLAATTASTCT
Trigger: AGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp GTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCCCTTaGCGAGGTGGTCCTGGAAGTGAAGTGACCAGGACT +
Preference number: 6 (lower is better)
Translates to: VEFQPLGALACP*RGGPGSEVTRT
Trigger: AGTCCTGGTCACTTCACTTCCAGGACCACCTCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp TCCCAGAGCTGTCCTCAAGGAGCTGGAGTCGCTTGGTaGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: SQSCPQGAGVAW*SFSLWVPWLAL
Trigger: AAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CAA 72 bp CCTCTTCGAAGCCCACGCTCTGCCCCTCATCTAGGCTaGACTGGATGCCCGAGGCCACGGAGTAATTGCGAG +
Preference number: 6 (lower is better)
Translates to: PLRSPRSAPHLG*TGCPRPRSNCE
Trigger: CTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS CAA 72 bp CGCAGGCCTTCCACTCTGCCAACACCTGCTGGTACCTaGCTGCCACCACTGCGTCCACCTGTACTCAGACCA +
Preference number: 6 (lower is better)
Translates to: RRPSTLPTPAGT*LPPLRPPVLRP
Trigger: TGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 72 bp CTCTTCACGGCCAGGCTTGGCTCCGTCCTAGAGAGCTaGGGAATCACTCCAGGCAGCCGCTCCCTGCTATTC +
Preference number: 6 (lower is better)
Translates to: LFTARLGSVLES*GITPGSRSLLF
Trigger: GAATAGCAGGGAGCGGCTGCCTGGAGTGATTCCCAAGCTCTCTAGGACGGAGCCAAGCCTGGCCGTGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CAA 72 bp GCACATGGACAGCTGTCCGTCTCAGCCGCTGAGAGCTaGGCTCAGACAAACCTCTTCACGGCCAGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: AHGQLSVSAAES*AQTNLFTARLG
Trigger: GCCAAGCCTGGCCGTGAAGAGGTTTGTCTGAGCCAAGCTCTCAGCGGCTGAGACGGACAGCTGTCCATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CAA 90 bp CAGACAAACCTCTTCACGGCCAGGCTTGGCTCCGTCCTAGAGAGCTaGGGAATCACTCCAGGCAGCCGCTCCCTGCTATTCTTGGCGTCC +
Preference number: 6 (lower is better)
Translates to: QTNLFTARLGSVLES*GITPGSRSLLFLAS
Trigger: GGACGCCAAGAATAGCAGGGAGCGGCTGCCTGGAGTGATTCCCAAGCTCTCTAGGACGGAGCCAAGCCTGGCCGTGAAGAGGTTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS TCA 72 bp CGAGGCCACGGAGTAATTGCGAGAGGAGGGCAGTCCTaGGTCTGGAGAGTCGAACTCCACGGAATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RGHGVIARGGQS*VWRVELHGMLL
Trigger: CAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS TCA 72 bp CTCCTTCTACAGCGGGAGACACCGGAAGACCGACGATaGAGGGCTGAGAGGCTCTCAGGGATGGCCTATGAG +
Preference number: 6 (lower is better)
Translates to: LLLQRETPEDRR*RAERLSGMAYE
Trigger: CTCATAGGCCATCCCTGAGAGCCTCTCAGCCCTTCATCGTCGGTCTTCCGGTGTCTCCCGCTGTAGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 72 bp CCATATCCTCCTTCGGCTGCACCAGCACGTGGTTCTTaGCATAGAGCAGCCGCGTCCGTGAGTTCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: PYPPSAAPARGS*HRAAASVSSGA
Trigger: TGCACCAGAACTCACGGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATATGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS GCA 72 bp GGCCTTCCACTCTGCCAACACCTGCTGGTACCTTGCTaGCACCACTGCGTCCACCTGCTCCATCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: GLPLCQHLLVPC*HHCVHLLHLLL
Trigger: AAGAAGGAGATGGAGCAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574250.1
ENST00000574563.5
CDS GCA 72 bp CTAGGCTTGACTGGATGCCCGAGGCCACGGAGTAATTaGGAGAGGAGGGCAGTCCTGAGTCTGGAGAGTCGA +
Preference number: 6 (lower is better)
Translates to: LGLTGCPRPRSN*ERRAVLSLESR
Trigger: TCGACTCTCCAGACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
CDS GCA 72 bp CTCTGCCAACACCTGCTGGTACCTTGCTGCCACCACTaGGTCCACCTGTACTCAGACCACACCACGACCATG +
Preference number: 6 (lower is better)
Translates to: LCQHLLVPCCHH*VHLYSDHTTTM
Trigger: CATGGTCGTGGTGTGGTCTGAGTACAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CCA 72 bp TCCAGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTaGTTGGGGGTCCACTTCAGAGTCAGGCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSSESPRVPFMS*LGVHFRVRLSA
Trigger: TGCAGAGAGCCTGACTCTGAAGTGGACCCCCAACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000570431.1
ENST00000573062.5
ENST00000574563.5
ENST00000574857.1
CDS CCA 72 bp TTTTCCCAGAGCTGTCCTCAAGGAGCTGGAGTCGCTTaGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: FSQSCPQGAGVA*WSFSLWVPWLA
Trigger: GGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp AGGTCATCGGCCCTCACAGAGGCTGCGCATGACAGCTaGCAGATGGGTCCTGATCGTTCTCTAGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: RSSALTEAAHDS*QMGPDRSLAPL
Trigger: GAGAGGAGCTAGAGAACGATCAGGACCCATCTGCCAGCTGTCATGCGCAGCCTCTGTGAGGGCCGATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp AAGACCGACGATGAAGGGCTGAGAGGCTCTCAGGGATaGCCTATGAGAAATGAGCTCCCGCTGGGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: KTDDEGLRGSQG*PMRNELPLGGG
Trigger: CCCTCCTCCCAGCGGGAGCTCATTTCTCATAGGCCATCCCTGAGAGCCTCTCAGCCCTTCATCGTCGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CCA 72 bp CACATGGACAGCTGTCCGTCTCAGCCGCTGAGAGCTTaGCTCAGACAAACCTCTTCACGGCCAGGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: HMDSCPSQPLRA*LRQTSSRPGLA
Trigger: AGCCAAGCCTGGCCGTGAAGAGGTTTGTCTGAGCCAAGCTCTCAGCGGCTGAGACGGACAGCTGTCCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CAA 72 bp AGCTCGGAGTCCCCCAGAGTCCCATTCATGAGCTGGTaGGGGGTCCACTTCAGAGTCAGGCTCTCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: SSESPRVPFMSW*GVHFRVRLSAD
Trigger: GTCTGCAGAGAGCCTGACTCTGAAGTGGACCCCCAACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000570431.1
ENST00000573062.5
ENST00000574563.5
ENST00000574857.1
CDS CAA 72 bp GTTTTCCCAGAGCTGTCCTCAAGGAGCTGGAGTCGCTaGGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGC +
Preference number: 6 (lower is better)
Translates to: VFPELSSRSWSR*VEFQPLGALAC
Trigger: GCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CAA 90 bp AAGGAAAGGGTTTTCCCAGAGCTGTCCTCAAGGAGCTGGAGTCGCTaGGTGGAGTTTCAGCCTCTGGGTGCCCTGGCTTGCCCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: KERVFPELSSRSWSR*VEFQPLGALACPWR
Trigger: TCGCCAAGGGCAAGCCAGGGCACCCAGAGGCTGAAACTCCACCAAGCGACTCCAGCTCCTTGAGGACAGCTCTGGGAAAACCCTTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS GCA 72 bp GCCCCGTGCCCATCTCCTCCATATCCACGGAGCGAATaGTGCTTCGTTTCCGTAGCTTGGGGAACACTTTCC +
Preference number: 6 (lower is better)
Translates to: APCPSPPYPRSE*CFVSVAWGTLS
Trigger: GGAAAGTGTTCCCCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATATGGAGGAGATGGGCACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
ENST00000574857.1
CDS CCA 72 bp GAGCTTGGCTCAGACAAACCTCTTCACGGCCAGGCTTaGCTCCGTCCTAGAGAGCTTGGGAATCACTCCAGG +
Preference number: 6 (lower is better)
Translates to: ELGSDKPLHGQA*LRPRELGNHSR
Trigger: CCTGGAGTGATTCCCAAGCTCTCTAGGACGGAGCCAAGCCTGGCCGTGAAGAGGTTTGTCTGAGCCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CCA 72 bp TGGGGGCCTCCACACCTCTGCTCAGGGCAGCCTGGATaGCTGGACCAGCTCGTACCATTGAAAAACTTGATG +
Preference number: 6 (lower is better)
Translates to: WGPPHLCSGQPG*LDQLVPLKNLM
Trigger: CATCAAGTTTTTCAATGGTACGAGCTGGTCCAGCCATCCAGGCTGCCCTGAGCAGAGGTGTGGAGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS CAA 90 bp AGGCACAGGGTCCCACTGCAGTTTTCCGCCAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATGAGCGCCGTGCGTACCCATACGTGT +
Preference number: 6 (lower is better)
Translates to: RHRVPLQFSARYCTT*SRTFSMSAVRTHTC
Trigger: ACACGTATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGTGGGACCCTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574650.1
CDS TCA 72 bp ACACGATCTGCCTCTTCATACTCTCACACAGTAGCCTaGGCGGCAACCTGTGGCAACAACCGGGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: TRSASSYSHTVA*AATCGNNRAQQ
Trigger: CTGCTGAGCCCGGTTGTTGCCACAGGTTGCCGCTCAGGCTACTGTGTGAGAGTATGAAGAGGCAGATCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS TCA 72 bp GCTCCGAACAAGCCTGCCATAGTCAGTTCTGTACAGTaGCAGGCAACATCGCGGGGAGGAAGGATCTCGCCA +
Preference number: 6 (lower is better)
Translates to: APNKPAIVSSVQ*QATSRGGRISP
Trigger: TGGCGAGATCCTTCCTCCCCGCGATGTTGCCTGTCACTGTACAGAACTGACTATGGCAGGCTTGTTCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS TCA 72 bp GCCGCTCCCTGCTATTCTTGGCGTCCAAATAAAGAGTaGGGTTGGCCTCCTGGAGCAAGCGGGGTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: AAPCYSWRPNKE*GWPPGASGVSP
Trigger: TGGAGAAACCCCGCTTGCTCCAGGAGGCCAACCTCACTCTTTATTTGGACGCCAAGAATAGCAGGGAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS GCA 72 bp CCGTGCCCATCTCCTCCATATCCACGGAGCGAATGCTaGTTCGTTTCCGTAGCTTGGGGAACACTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PCPSPPYPRSEC*FVSVAWGTLSP
Trigger: AGGGGAAAGTGTTCCCCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATATGGAGGAGATGGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000574563.5
ENST00000574857.1
CDS GCA 72 bp AGGCACAGGGTCCCACTGCAGTTTTCCGCCAGGTATTaGACGACCTTGTCCAGAACTTTCTCGATGAGCGCC +
Preference number: 6 (lower is better)
Translates to: RHRVPLQFSARY*TTLSRTFSMSA
Trigger: GGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGTGGGACCCTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574650.1
CDS CAA 72 bp GTCCCACTGCAGTTTTCCGCCAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATGAGCGCCGTGCGTACC +
Preference number: 6 (lower is better)
Translates to: VPLQFSARYCTT*SRTFSMSAVRT
Trigger: GGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574650.1
CDS CAA 72 bp CTACCCTGCTCTGTTTCCATCTGCTCTGCTAGATTCTaGACATCCCGGCCTTTGGGGAAGGGCCCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LPCSVSICSARF*TSRPLGKGPQD
Trigger: ATCCTGGGGGCCCTTCCCCAAAGGCCGGGATGTCAAGAATCTAGCAGAGCAGATGGAAACAGAGCAGGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS TCA 72 bp CGGATTGGGAGCTGTGAGGTTCCGCGAGCAGATCATTaGGAGCATCGCGTGCAGTTTATCCTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: RIGSCEVPRADH*EHRVQFILLFL
Trigger: GAGGAAGAGGAGGATAAACTGCACGCGATGCTCTCAATGATCTGCTCGCGGAACCTCACAGCTCCCAATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000575367.1
CDS TCA 72 bp TACCCTGCTCTGTTTCCATCTGCTCTGCTAGATTCTTaGCATCCCGGCCTTTGGGGAAGGGCCCCCAGGATT +
Preference number: 6 (lower is better)
Translates to: YPALFPSALLDS*HPGLWGRAPRI
Trigger: AATCCTGGGGGCCCTTCCCCAAAGGCCGGGATGTCAAGAATCTAGCAGAGCAGATGGAAACAGAGCAGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573851.1
CDS CCA 72 bp GATGAGGGAAAGCTTCCTGAAGAGGTGTGGCTGAAGTaGAGGTCTGGTAGGCCCCTAAGAATGAAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: DEGKLPEEVWLK*RSGRPLRMKRR
Trigger: GCGCCTCTTCATTCTTAGGGGCCTACCAGACCTCCACTTCAGCCACACCTCTTCAGGAAGCTTTCCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572841.1
CDS CAA 72 bp AAGGCACAGGGTCCCACTGCAGTTTTCCGCCAGGTATaGCACGACCTTGTCCAGAACTTTCTCGATGAGCGC +
Preference number: 6 (lower is better)
Translates to: KAQGPTAVFRQV*HDLVQNFLDER
Trigger: GCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGTGGGACCCTGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574650.1
CDS TCA 72 bp CCAGGTATTGCACGACCTTGTCCAGAACTTTCTCGATaGGCGCCGTGCGTACCCATACGTGTTTCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: PGIARPCPELSR*APCVPIRVSRP
Trigger: AGGCCTTGAAACACGTATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
ENST00000574650.1
CDS TCA 72 bp TCATGTCACCAGCGTCTTTCATCGGATTGGGAGCTGTaGGGTTCCGCGAGCAGATCATTGAGAGCATCGCGT +
Preference number: 6 (lower is better)
Translates to: SCHQRLSSDWEL*GSASRSLRASR
Trigger: ACGCGATGCTCTCAATGATCTGCTCGCGGAACCTCACAGCTCCCAATCCGATGAAAGACGCTGGTGACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000575367.1
CDS TCA 72 bp GCAGAGGCACAGTTAGCCATTTCCAGTTGGAGAAAATaGGACACAGGCACCTTAGGCCTTTCTCGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: AEAQLAISSWRK*DTGTLGLSRRA
Trigger: GGCCCTGCGAGAAAGGCCTAAGGTGCCTGTGTCTCATTTTCTCCAACTGGAAATGGCTAACTGTGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp GTGAGGTTCCGCGAGCAGATCATTGAGAGCATCGCGTaGAGTTTATCCTCCTCTTCCTCATCATCGTCCACC +
Preference number: 6 (lower is better)
Translates to: VRFREQIIESIA*SLSSSSSSSST
Trigger: GGTGGACGATGATGAGGAAGAGGAGGATAAACTGCACGCGATGCTCTCAATGATCTGCTCGCGGAACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268989.8
ENST00000575367.1
CDS GCA 72 bp CCAGAAAGAGCTACCCTCCCGTGCTCCGAACAAGCCTaGCATAGTCAGTTCTGTACAGTGACAGGCAACATC +
Preference number: 6 (lower is better)
Translates to: PERATLPCSEQA*HSQFCTVTGNI
Trigger: GATGTTGCCTGTCACTGTACAGAACTGACTATGGCAGGCTTGTTCGGAGCACGGGAGGGTAGCTCTTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp AAGGCAGGAGTGATGCCAGAAAGAGCTACCCTCCCGTaGTCCGAACAAGCCTGCCATAGTCAGTTCTGTACA +
Preference number: 6 (lower is better)
Translates to: KAGVMPERATLP*SEQACHSQFCT
Trigger: TGTACAGAACTGACTATGGCAGGCTTGTTCGGAGCACGGGAGGGTAGCTCTTTCTGGCATCACTCCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS GCA 72 bp AACTCCCCTGAAGATAGGATGACCATAGCCAAGAGGTaGACACAGCCAGCCATGACCCCTGAGATCTGTGCT +
Preference number: 6 (lower is better)
Translates to: NSPEDRMTIAKR*TQPAMTPEICA
Trigger: AGCACAGATCTCAGGGGTCATGGCTGGCTGTGTGCACCTCTTGGCTATGGTCATCCTATCTTCAGGGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574857.1
CDS CAA 72 bp TACTTGCTGCAGTTTTCCGCCAGGTATTGCACGACCTaGTCCAGAACTTTCTCGATGAGCGCCGTGCGTACC +
Preference number: 6 (lower is better)
Translates to: YLLQFSARYCTT*SRTFSMSAVRT
Trigger: GGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS CCA 72 bp GCCCATGATGTGCCGGCACAACTCCGGACCTTCACTTaGGTTCTCTCTCATTCTGTCCTCATAAGTACTGCA +
Preference number: 6 (lower is better)
Translates to: AHDVPAQLRTFT*VLSHSVLISTA
Trigger: TGCAGTACTTATGAGGACAGAATGAGAGAGAACCCAAGTGAAGGTCCGGAGTTGTGCCGGCACATCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CAA 72 bp TCTGGGACTAGAACCCAGCGCTGCCTGTTGCTAGCTTaGAGGTCTTTCTACAAGGAGGAGGGCTTCCCTAAA +
Preference number: 6 (lower is better)
Translates to: SGTRTQRCLLLA*RSFYKEEGFPK
Trigger: TTTAGGGAAGCCCTCCTCCTTGTAGAAAGACCTCAAAGCTAGCAACAGGCAGCGCTGGGTTCTAGTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 90 bp ATACCCAGAGAAGTAGGCAGCAGAGGCACAGTTAGCCATTTCCAGTaGGAGAAAATGAGACACAGGCACCTTAGGCCTTTCTCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: IPREVGSRGTVSHFQ*EKMRHRHLRPFSQG
Trigger: GCCCTGCGAGAAAGGCCTAAGGTGCCTGTGTCTCATTTTCTCCAACTGGAAATGGCTAACTGTGCCTCTGCTGCCTACTTCTCTGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 90 bp CAGCTTGTCAGTAGTGGATCTGGGACTAGAACCCAGCGCTGCCTGTaGCTAGCTTTGAGGTCTTTCTACAAGGAGGAGGGCTTCCCTAAA +
Preference number: 6 (lower is better)
Translates to: QLVSSGSGTRTQRCL*LALRSFYKEEGFPK
Trigger: TTTAGGGAAGCCCTCCTCCTTGTAGAAAGACCTCAAAGCTAGCAACAGGCAGCGCTGGGTTCTAGTCCCAGATCCACTACTGACAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 72 bp CTTCTCGTAGTACTTGCTGCAGTTTTCCGCCAGGTATaGCACGACCTTGTCCAGAACTTTCTCGATGAGCGC +
Preference number: 6 (lower is better)
Translates to: LLVVLAAVFRQV*HDLVQNFLDER
Trigger: GCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGCAAGTACTACGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268989.8
ENST00000426855.6
ENST00000573062.5
ENST00000574563.5
CDS GCA 72 bp AGTGTTGGTTGGGCCAGGCAGTCACAGTTTAGAACTTaGTGTTCAAAAGGCAGGAGTGATGCCAGAAAGAGC +
Preference number: 6 (lower is better)
Translates to: SVGWARQSQFRT*CSKGRSDARKS
Trigger: GCTCTTTCTGGCATCACTCCTGCCTTTTGAACAGCAAGTTCTAAACTGTGACTGCCTGGCCCAACCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS CAA 72 bp GAAGTAGGCAGCAGAGGCACAGTTAGCCATTTCCAGTaGGAGAAAATGAGACACAGGCACCTTAGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: EVGSRGTVSHFQ*EKMRHRHLRPF
Trigger: GAAAGGCCTAAGGTGCCTGTGTCTCATTTTCTCCAACTGGAAATGGCTAACTGTGCCTCTGCTGCCTACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1
CDS TCA 72 bp ACGAACTTCACCTACATGAATCTTCGTTTCCTCATGTaGAAAATGGAGAGAGGCAGCGGAGGATCATCAGGA +
Preference number: 6 (lower is better)
Translates to: TNFTYMNLRFLM*KMERGSGGSSG
Trigger: TCCTGATGATCCTCCGCTGCCTCTCTCCATTTTTCACATGAGGAAACGAAGATTCATGTAGGTGAAGTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS TCA 72 bp CCACCCAGGGATCTTGGTCAACGAACTTCACCTACATaGATCTTCGTTTCCTCATGTGAAAAATGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PPRDLGQRTSPT*IFVSSCEKWRE
Trigger: CTCTCTCCATTTTTCACATGAGGAAACGAAGATTCATGTAGGTGAAGTTCGTTGACCAAGATCCCTGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573717.2
CDS CCA 72 bp AGCCTGAGACTAAGTGCCAAGTGTGTAAATACATTCTaGCCAAAGATGCGTCTCTTTGTCAGGTACATCTGG +
Preference number: 6 (lower is better)
Translates to: SLRLSAKCVNTF*PKMRLFVRYIW
Trigger: CCAGATGTACCTGACAAAGAGACGCATCTTTGGCCAGAATGTATTTACACACTTGGCACTTAGTCTCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575367.1
CDS CCA 72 bp AAAGCGTCCTTAAAATTGAAACTTATCAGTGTTGGTTaGGCCAGGCAGTCACAGTTTAGAACTTGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: KASLKLKLISVG*ARQSQFRTCCS
Trigger: TGAACAGCAAGTTCTAAACTGTGACTGCCTGGCCCAACCAACACTGATAAGTTTCAATTTTAAGGACGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573717.2
ENST00000574857.1